>GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC|
           1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain
           alpha-hydroxy acid oxidase 1)
          Length = 367

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHVVTEAD 171
           FIG PVVF+LA  GE GV  VL+MLRDEFEL MALSGC  + +ITRNH+VTE D
Sbjct: 306 FIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVTEWD 359

>GOX2_ARATH (Q9LRR9) Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 (EC|
           1.1.3.15) (Glycolate oxidase 2) (GOX 2) (Short chain
           alpha-hydroxy acid oxidase 2)
          Length = 367

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 37/54 (68%), Positives = 42/54 (77%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHVVTEAD 171
           FIG PVVFSLA  GE GV  VL+MLRDEFEL MALSGC  + +I+RNH+ TE D
Sbjct: 306 FIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWD 359

>GOX_SPIOL (P05414) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15)|
           (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy
           acid oxidase)
          Length = 369

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHVVTEAD 171
           FIG PVVFSLA  GE GV  VL+M+RDEFEL MALSGC  + +I+R+H+  + D
Sbjct: 306 FIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359

>HAOX1_HUMAN (Q9UJM8) Hydroxyacid oxidase 1 (EC 1.1.3.15) (HAOX1) (Glycolate|
           oxidase) (GOX)
          Length = 370

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 24/49 (48%), Positives = 34/49 (69%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHV 186
           F+G P+V+ LA  GE GV +VL++L++EF L MALSGC  +  I +  V
Sbjct: 312 FVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLV 360

>HAOX2_HUMAN (Q9NYQ3) Hydroxyacid oxidase 2 (EC 1.1.3.15) (HAOX2)|
           ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain
           alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid
           oxidase)
          Length = 351

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 23/49 (46%), Positives = 32/49 (65%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHV 186
           F+G P+++ LA  GE GV  VL +L +EF   MAL+GC  + +I RN V
Sbjct: 298 FLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLV 346

>HAOX1_MOUSE (Q9WU19) Hydroxyacid oxidase 1 (EC 1.1.3.15) (HAOX1) (Glycolate|
           oxidase) (GOX)
          Length = 370

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 23/49 (46%), Positives = 34/49 (69%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHV 186
           F+G P+++ LA  GE GV +VL++L++EF L MALSGC  +  I +  V
Sbjct: 312 FVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLV 360

>HAOX2_MOUSE (Q9NYQ2) Hydroxyacid oxidase 2 (EC 1.1.3.15) (HAOX2)|
           ((S)-2-hydroxy-acid oxidase, peroxisomal) (Medium chain
           alpha-hydroxy acid oxidase) (Medium-chain L-2-hydroxy
           acid oxidase)
          Length = 353

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDIT 198
           F+G P+++ LA  GE GV  VL +L++E    MALSGC  + +I+
Sbjct: 300 FLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEIS 344

>LLDD_PSEPK (Q88DT3) L-lactate dehydrogenase [cytochrome] (EC 1.1.2.3)|
          Length = 381

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = -1

Query: 329 IGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHVVTE 177
           IG   +++LAV G+ GV N+L++   E  + M L+G   I +ITR+ +V E
Sbjct: 328 IGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRE 378

>HAOX2_RAT (Q07523) Hydroxyacid oxidase 2 (EC 1.1.3.15) (HAOX2)|
           ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain
           alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid
           oxidase)
          Length = 352

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = -1

Query: 332 FIGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDIT 198
           F+G P+++ LA  GE GV  VL +L  E    M LSGC  + +I+
Sbjct: 299 FLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEIS 343

>CYB2_HANAN (P09437) Cytochrome b2, mitochondrial precursor (EC 1.1.2.3)|
           (L-lactate dehydrogenase [Cytochrome]) (L-lactate
           ferricytochrome C oxidoreductase) (L-LCR)
          Length = 573

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 14/44 (31%), Positives = 29/44 (65%)
 Frame = -1

Query: 329 IGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDIT 198
           +G P +++++  G+ GV+  +++L+DE E+ M L G   I ++T
Sbjct: 490 LGRPFLYAMSSYGDKGVTKAIQLLKDEIEMNMRLLGVNKIEELT 533

>CYB2_YEAST (P00175) Cytochrome b2, mitochondrial precursor (EC 1.1.2.3)|
           (L-lactate dehydrogenase [Cytochrome]) (L-lactate
           ferricytochrome C oxidoreductase) (L-LCR)
          Length = 591

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -1

Query: 329 IGXPVVFSLAVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDI 201
           +G P +++ +  G  GV   +++LRDE E+ M L G   I ++
Sbjct: 511 LGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAEL 553

>IDI2_METBF (Q46CL4) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 365

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 302 AVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHVV 183
           A+ G+  V  VL  + DEF + M L GC  I D+    VV
Sbjct: 300 ALEGKESVVRVLSRMLDEFRIAMFLCGCANIQDLRNAPVV 339

>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12|
          Length = 586

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 138 WNQIESAPTSSPPLLIQDLHT*GHPCMIC 52
           W    + P   PP+ +Q LHT  H  +IC
Sbjct: 263 WTVTSNVPNKEPPISVQLLHTLEHTSVIC 291

>IDI2_METMA (Q8PW37) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 365

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 302 AVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHVV 183
           ++ G+  V  VL  + +EF+  M L GC  I D+  + VV
Sbjct: 300 SLEGKESVVRVLSCMLEEFKAAMFLCGCGNIKDLHNSPVV 339

>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 852

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 228 ERHGQLELVAQHLEHVAHPGLPGHRQREHH 317
           E  G+ EL  +   HVA    PGHR RE H
Sbjct: 563 EEGGEEELTVKAGHHVASHPPPGHRSREGH 592

>UL84_HCMVA (P16727) 65 kDa early nonstructural protein (UL84 protein)|
          Length = 586

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 154 RPACNLEPNRVGTYVLAAVIDPRLT 80
           RPA +L P R G ++L +VID +LT
Sbjct: 197 RPAFSLFPARPGCHILRSVIDQQLT 221

>UL84_HCMVT (P29839) 65 kDa early nonstructural protein (UL84 protein)|
          Length = 587

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 154 RPACNLEPNRVGTYVLAAVIDPRLT 80
           RPA +L P R G ++L +VID +LT
Sbjct: 198 RPAFSLFPARPGCHILRSVIDQQLT 222

>IDI2_METAC (Q8TT35) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 365

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 302 AVXGEXGVSNVLKMLRDEFELXMALSGCXXIXDITRNHVV 183
           ++ G+  V  VL  + DEF   M L GC  I  +  + VV
Sbjct: 300 SLEGKESVVKVLSCMLDEFRAAMFLCGCANIQALHNSPVV 339

>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)|
          Length = 645

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 234 HGQLELVAQHLEHVAHPGLPGHRQREHHRXSDE 332
           HG     AQHL H++H     H    HH   DE
Sbjct: 226 HGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDE 258

>MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase|
           (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine
           synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47)
           (OAS sulfhydrylase)]
          Length = 443

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
 Frame = +3

Query: 228 ERHGQLEL-VAQHLEH------VAHPGLPGHRQREH 314
           ERHG   L +AQ+LE       V++PGLP H   E+
Sbjct: 295 ERHGSNALKLAQYLESSPYVSWVSYPGLPSHSHHEN 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,920,832
Number of Sequences: 219361
Number of extensions: 533265
Number of successful extensions: 1098
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)