ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60m17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LIP_RHIMI (P19515) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 49 2e-05
2LIP_RHIOR (P61872) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 44 5e-04
3LIP_RHINI (P61871) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 44 5e-04
4YLF2_CAEEL (Q03572) Hypothetical protein C40H1.2 36 0.10
5LIP_RHIJA (Q7M4U7) Lipase (EC 3.1.1.3) (Triacylglycerol lipase) ... 35 0.22
6PDIA3_RAT (P11598) Protein disulfide-isomerase A3 precursor (EC ... 32 1.9
7PDIA3_HUMAN (P30101) Protein disulfide-isomerase A3 precursor (E... 32 1.9
8PDIA3_BOVIN (P38657) Protein disulfide-isomerase A3 precursor (E... 32 1.9
9FAEA_ASPAW (Q9P979) Feruloyl esterase A precursor (EC 3.1.1.73) ... 32 1.9
10FAEA_ASPNG (O42807) Feruloyl esterase A precursor (EC 3.1.1.73) ... 32 2.5
11NPC1_PIG (P56941) Niemann-Pick C1 protein precursor 31 3.2
12FAEA_ASPTU (O42815) Feruloyl esterase A precursor (EC 3.1.1.73) ... 31 4.2
13NPY6R_MOUSE (Q61212) Neuropeptide Y receptor type 6 (NPY6-R) (Pa... 31 4.2

>LIP_RHIMI (P19515) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 363

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
 Frame = -3

Query: 706 FAKYVPNT----IRLVHGHDIVPHLPP-YFSFLSKLTYHHFPREVWIDDSDGNTTEQICD 542
           FA YV +T     R V+  DIVPHLPP  F FL      H   E WI D+   T  Q+C 
Sbjct: 278 FANYVVSTGIPYRRTVNERDIVPHLPPAAFGFL------HAGEEYWITDNSPETV-QVCT 330

Query: 541 ASGEDPNCCRCLSILSLSIQDHFTYLGVD 455
           +  E  +C   + +   S+ DH +Y G++
Sbjct: 331 SDLETSDCSNSI-VPFTSVLDHLSYFGIN 358



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>LIP_RHIOR (P61872) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
           (ROL) (RDL)
          Length = 392

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
 Frame = -3

Query: 706 FAKYVPNT----IRLVHGHDIVPHLPPY-FSFLSKLTYHHFPREVWIDDSDGNTTEQICD 542
           FA YV +T     R VH  DIVPH+PP  F FL      H   E WI    G +  QIC 
Sbjct: 308 FAYYVESTGIPFQRTVHKRDIVPHVPPQSFGFL------HPGVESWI--KSGTSNVQICT 359

Query: 541 ASGEDPNCCRCLSILSLSIQDHFTYLGVD 455
           +  E  +C   + +   SI DH +Y  ++
Sbjct: 360 SEIETKDCSNSI-VPFTSILDHLSYFDIN 387



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>LIP_RHINI (P61871) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
           (Lipase II) (RNL)
          Length = 392

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
 Frame = -3

Query: 706 FAKYVPNT----IRLVHGHDIVPHLPPY-FSFLSKLTYHHFPREVWIDDSDGNTTEQICD 542
           FA YV +T     R VH  DIVPH+PP  F FL      H   E WI    G +  QIC 
Sbjct: 308 FAYYVESTGIPFQRTVHKRDIVPHVPPQSFGFL------HPGVESWI--KSGTSNVQICT 359

Query: 541 ASGEDPNCCRCLSILSLSIQDHFTYLGVD 455
           +  E  +C   + +   SI DH +Y  ++
Sbjct: 360 SEIETKDCSNSI-VPFTSILDHLSYFDIN 387



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>YLF2_CAEEL (Q03572) Hypothetical protein C40H1.2|
          Length = 208

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = -3

Query: 706 FAKYVPNTIRLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDD-SDGNTTEQICDASGE 530
           ++   P++  ++H  D++P +P      +     H   EVW ++    N T QIC+ +  
Sbjct: 107 YSNKFPSSFHIIHRLDLIPRVPAIDPHTNTTVMFHPRTEVWYNNYMRLNDTYQICEEA-- 164

Query: 529 DPNCCRCLSILSLSIQDHFTYLGVDM 452
           D N C       L++ DH  Y  +++
Sbjct: 165 DGNNCSDAVTEGLNMNDHGFYFDINI 190



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>LIP_RHIJA (Q7M4U7) Lipase (EC 3.1.1.3) (Triacylglycerol lipase) (Fragments)|
          Length = 179

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = -3

Query: 706 FAKYVPNTIRLVHGHDIVPHLPPY-FSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGE 530
           FA YV +T  +    DIVPH+PP  F FL      H   E WI    G +  QIC  + E
Sbjct: 103 FAYYVEST-GIPFQRDIVPHVPPQSFGFL------HPGVESWI--KSGTSNVQIC--TSE 151

Query: 529 DPNCCRCLSILSLSIQDHFTYLGVD 455
               C    +   SI DH +Y  ++
Sbjct: 152 IETDCSNSIVPFTSILDHLSYFDIN 176



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>PDIA3_RAT (P11598) Protein disulfide-isomerase A3 precursor (EC 5.3.4.1)|
           (Disulfide isomerase ER-60) (ERp60) (58 kDa microsomal
           protein) (p58) (ERp57) (HIP-70) (Q-2)
          Length = 505

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 227 GVSVGEFHSDWVVHCSFIACEYVEM*TRIIGSRP*TLAGCTKDT 96
           G+ + EF + W  HC  +A EY    TR+ G  P     CT +T
Sbjct: 46  GLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANT 89



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>PDIA3_HUMAN (P30101) Protein disulfide-isomerase A3 precursor (EC 5.3.4.1)|
           (Disulfide isomerase ER-60) (ERp60) (58 kDa microsomal
           protein) (p58) (ERp57) (58 kDa glucose-regulated
           protein)
          Length = 505

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 227 GVSVGEFHSDWVVHCSFIACEYVEM*TRIIGSRP*TLAGCTKDT 96
           G+ + EF + W  HC  +A EY    TR+ G  P     CT +T
Sbjct: 46  GLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANT 89



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>PDIA3_BOVIN (P38657) Protein disulfide-isomerase A3 precursor (EC 5.3.4.1)|
           (Disulfide isomerase ER-60) (ERP60) (58 kDa microsomal
           protein) (P58) (ERp57)
          Length = 505

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 227 GVSVGEFHSDWVVHCSFIACEYVEM*TRIIGSRP*TLAGCTKDT 96
           G+ + EF + W  HC  +A EY    TR+ G  P     CT +T
Sbjct: 46  GLMLVEFFAPWCGHCKKLAPEYEAAATRLKGIVPLAKVDCTANT 89



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>FAEA_ASPAW (Q9P979) Feruloyl esterase A precursor (EC 3.1.1.73) (Ferulic acid|
           esterase A) (FAEA) (Feruloylesterase)
          Length = 281

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = -3

Query: 679 RLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGEDPNCCRCLSI 500
           R+ H +D +P+LPP      +  Y H   E W  D        +C  +G++  CC     
Sbjct: 209 RVTHANDGIPNLPPV-----EQGYAHGGVEYWSVDPYSAQNTFVC--TGDEVQCCEAQGG 261

Query: 499 LSLSIQDHFTYLGVDMESDDW 437
             ++   H TY G+   +  W
Sbjct: 262 QGVN-NAHTTYFGMTSGACTW 281



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>FAEA_ASPNG (O42807) Feruloyl esterase A precursor (EC 3.1.1.73) (Ferulic acid|
           esterase A) (FAE-III) (Cinnamoyl esterase)
          Length = 281

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = -3

Query: 679 RLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGEDPNCCRCLSI 500
           R+ H +D +P+LPP     +   Y H   E W  D        +C  +G++  CC     
Sbjct: 209 RVTHSNDGIPNLPP-----ADEGYAHGGVEYWSVDPYSAQNTFVC--TGDEVQCCEAQGG 261

Query: 499 LSLSIQDHFTYLGVDMESDDW 437
             ++   H TY G+   +  W
Sbjct: 262 QGVN-DAHTTYFGMTSGACTW 281



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>NPC1_PIG (P56941) Niemann-Pick C1 protein precursor|
          Length = 1277

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 565  NTTEQICDASGEDPNCCRCLSILS 494
            N+T+Q C+AS  DP C RC  + S
Sbjct: 961  NSTDQFCNASVVDPTCIRCRPLTS 984



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>FAEA_ASPTU (O42815) Feruloyl esterase A precursor (EC 3.1.1.73) (Ferulic acid|
           esterase A)
          Length = 280

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 21/81 (25%), Positives = 33/81 (40%)
 Frame = -3

Query: 679 RLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGEDPNCCRCLSI 500
           R+ H +D +P+LPP     +   Y H   E W  D        +C  +G++  CC     
Sbjct: 208 RVTHANDGIPNLPP-----ADEGYAHGVVEYWSVDPYSAQNTFVC--TGDEVQCCEAQGG 260

Query: 499 LSLSIQDHFTYLGVDMESDDW 437
             ++   H TY G+      W
Sbjct: 261 QGVN-NAHTTYFGMTSGHCTW 280



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>NPY6R_MOUSE (Q61212) Neuropeptide Y receptor type 6 (NPY6-R) (Pancreatic|
           polypeptide receptor 2) (PP2)
          Length = 371

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 7/30 (23%)
 Frame = -1

Query: 699 NMYQTLFDWYMDMIL-CH------ICHLIS 631
           N++  +FDWY +M++ CH      +CHLI+
Sbjct: 278 NIFNVIFDWYHEMLMSCHHDLVFVVCHLIA 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,547,705
Number of Sequences: 219361
Number of extensions: 2451013
Number of successful extensions: 6507
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6503
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7139613222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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