| Clone Name | rbah60m17 |
|---|---|
| Clone Library Name | barley_pub |
>LIP_RHIMI (P19515) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 363 Score = 48.5 bits (114), Expect = 2e-05 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Frame = -3 Query: 706 FAKYVPNT----IRLVHGHDIVPHLPP-YFSFLSKLTYHHFPREVWIDDSDGNTTEQICD 542 FA YV +T R V+ DIVPHLPP F FL H E WI D+ T Q+C Sbjct: 278 FANYVVSTGIPYRRTVNERDIVPHLPPAAFGFL------HAGEEYWITDNSPETV-QVCT 330 Query: 541 ASGEDPNCCRCLSILSLSIQDHFTYLGVD 455 + E +C + + S+ DH +Y G++ Sbjct: 331 SDLETSDCSNSI-VPFTSVLDHLSYFGIN 358
>LIP_RHIOR (P61872) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| (ROL) (RDL) Length = 392 Score = 43.9 bits (102), Expect = 5e-04 Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%) Frame = -3 Query: 706 FAKYVPNT----IRLVHGHDIVPHLPPY-FSFLSKLTYHHFPREVWIDDSDGNTTEQICD 542 FA YV +T R VH DIVPH+PP F FL H E WI G + QIC Sbjct: 308 FAYYVESTGIPFQRTVHKRDIVPHVPPQSFGFL------HPGVESWI--KSGTSNVQICT 359 Query: 541 ASGEDPNCCRCLSILSLSIQDHFTYLGVD 455 + E +C + + SI DH +Y ++ Sbjct: 360 SEIETKDCSNSI-VPFTSILDHLSYFDIN 387
>LIP_RHINI (P61871) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| (Lipase II) (RNL) Length = 392 Score = 43.9 bits (102), Expect = 5e-04 Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%) Frame = -3 Query: 706 FAKYVPNT----IRLVHGHDIVPHLPPY-FSFLSKLTYHHFPREVWIDDSDGNTTEQICD 542 FA YV +T R VH DIVPH+PP F FL H E WI G + QIC Sbjct: 308 FAYYVESTGIPFQRTVHKRDIVPHVPPQSFGFL------HPGVESWI--KSGTSNVQICT 359 Query: 541 ASGEDPNCCRCLSILSLSIQDHFTYLGVD 455 + E +C + + SI DH +Y ++ Sbjct: 360 SEIETKDCSNSI-VPFTSILDHLSYFDIN 387
>YLF2_CAEEL (Q03572) Hypothetical protein C40H1.2| Length = 208 Score = 36.2 bits (82), Expect = 0.10 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Frame = -3 Query: 706 FAKYVPNTIRLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDD-SDGNTTEQICDASGE 530 ++ P++ ++H D++P +P + H EVW ++ N T QIC+ + Sbjct: 107 YSNKFPSSFHIIHRLDLIPRVPAIDPHTNTTVMFHPRTEVWYNNYMRLNDTYQICEEA-- 164 Query: 529 DPNCCRCLSILSLSIQDHFTYLGVDM 452 D N C L++ DH Y +++ Sbjct: 165 DGNNCSDAVTEGLNMNDHGFYFDINI 190
>LIP_RHIJA (Q7M4U7) Lipase (EC 3.1.1.3) (Triacylglycerol lipase) (Fragments)| Length = 179 Score = 35.0 bits (79), Expect = 0.22 Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = -3 Query: 706 FAKYVPNTIRLVHGHDIVPHLPPY-FSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGE 530 FA YV +T + DIVPH+PP F FL H E WI G + QIC + E Sbjct: 103 FAYYVEST-GIPFQRDIVPHVPPQSFGFL------HPGVESWI--KSGTSNVQIC--TSE 151 Query: 529 DPNCCRCLSILSLSIQDHFTYLGVD 455 C + SI DH +Y ++ Sbjct: 152 IETDCSNSIVPFTSILDHLSYFDIN 176
>PDIA3_RAT (P11598) Protein disulfide-isomerase A3 precursor (EC 5.3.4.1)| (Disulfide isomerase ER-60) (ERp60) (58 kDa microsomal protein) (p58) (ERp57) (HIP-70) (Q-2) Length = 505 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -2 Query: 227 GVSVGEFHSDWVVHCSFIACEYVEM*TRIIGSRP*TLAGCTKDT 96 G+ + EF + W HC +A EY TR+ G P CT +T Sbjct: 46 GLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANT 89
>PDIA3_HUMAN (P30101) Protein disulfide-isomerase A3 precursor (EC 5.3.4.1)| (Disulfide isomerase ER-60) (ERp60) (58 kDa microsomal protein) (p58) (ERp57) (58 kDa glucose-regulated protein) Length = 505 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -2 Query: 227 GVSVGEFHSDWVVHCSFIACEYVEM*TRIIGSRP*TLAGCTKDT 96 G+ + EF + W HC +A EY TR+ G P CT +T Sbjct: 46 GLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANT 89
>PDIA3_BOVIN (P38657) Protein disulfide-isomerase A3 precursor (EC 5.3.4.1)| (Disulfide isomerase ER-60) (ERP60) (58 kDa microsomal protein) (P58) (ERp57) Length = 505 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -2 Query: 227 GVSVGEFHSDWVVHCSFIACEYVEM*TRIIGSRP*TLAGCTKDT 96 G+ + EF + W HC +A EY TR+ G P CT +T Sbjct: 46 GLMLVEFFAPWCGHCKKLAPEYEAAATRLKGIVPLAKVDCTANT 89
>FAEA_ASPAW (Q9P979) Feruloyl esterase A precursor (EC 3.1.1.73) (Ferulic acid| esterase A) (FAEA) (Feruloylesterase) Length = 281 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/81 (25%), Positives = 34/81 (41%) Frame = -3 Query: 679 RLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGEDPNCCRCLSI 500 R+ H +D +P+LPP + Y H E W D +C +G++ CC Sbjct: 209 RVTHANDGIPNLPPV-----EQGYAHGGVEYWSVDPYSAQNTFVC--TGDEVQCCEAQGG 261 Query: 499 LSLSIQDHFTYLGVDMESDDW 437 ++ H TY G+ + W Sbjct: 262 QGVN-NAHTTYFGMTSGACTW 281
>FAEA_ASPNG (O42807) Feruloyl esterase A precursor (EC 3.1.1.73) (Ferulic acid| esterase A) (FAE-III) (Cinnamoyl esterase) Length = 281 Score = 31.6 bits (70), Expect = 2.5 Identities = 21/81 (25%), Positives = 34/81 (41%) Frame = -3 Query: 679 RLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGEDPNCCRCLSI 500 R+ H +D +P+LPP + Y H E W D +C +G++ CC Sbjct: 209 RVTHSNDGIPNLPP-----ADEGYAHGGVEYWSVDPYSAQNTFVC--TGDEVQCCEAQGG 261 Query: 499 LSLSIQDHFTYLGVDMESDDW 437 ++ H TY G+ + W Sbjct: 262 QGVN-DAHTTYFGMTSGACTW 281
>NPC1_PIG (P56941) Niemann-Pick C1 protein precursor| Length = 1277 Score = 31.2 bits (69), Expect = 3.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -3 Query: 565 NTTEQICDASGEDPNCCRCLSILS 494 N+T+Q C+AS DP C RC + S Sbjct: 961 NSTDQFCNASVVDPTCIRCRPLTS 984
>FAEA_ASPTU (O42815) Feruloyl esterase A precursor (EC 3.1.1.73) (Ferulic acid| esterase A) Length = 280 Score = 30.8 bits (68), Expect = 4.2 Identities = 21/81 (25%), Positives = 33/81 (40%) Frame = -3 Query: 679 RLVHGHDIVPHLPPYFSFLSKLTYHHFPREVWIDDSDGNTTEQICDASGEDPNCCRCLSI 500 R+ H +D +P+LPP + Y H E W D +C +G++ CC Sbjct: 208 RVTHANDGIPNLPP-----ADEGYAHGVVEYWSVDPYSAQNTFVC--TGDEVQCCEAQGG 260 Query: 499 LSLSIQDHFTYLGVDMESDDW 437 ++ H TY G+ W Sbjct: 261 QGVN-NAHTTYFGMTSGHCTW 280
>NPY6R_MOUSE (Q61212) Neuropeptide Y receptor type 6 (NPY6-R) (Pancreatic| polypeptide receptor 2) (PP2) Length = 371 Score = 30.8 bits (68), Expect = 4.2 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 7/30 (23%) Frame = -1 Query: 699 NMYQTLFDWYMDMIL-CH------ICHLIS 631 N++ +FDWY +M++ CH +CHLI+ Sbjct: 278 NIFNVIFDWYHEMLMSCHHDLVFVVCHLIA 307 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 111,547,705 Number of Sequences: 219361 Number of extensions: 2451013 Number of successful extensions: 6507 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 6282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6503 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)