ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bastl12g08 | 336 | BY855039 | not_full | ref|XM_874422.1| PREDICTED: Bos taurus similar to A-kinase anchor protein 8, transcript variant 6 (LOC522905), mRNA Length = 3389 | 243 | not_full | GMHB_PSEAE (Q9I7C0) D,D-heptose 1,7-bisphosphate phosphatase (EC 3.1.3.-) (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) Length = 178 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl12g07 | 388 | BY855038 | not_full | gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold Length = 527158 | 134 | not_full | DMI1L_ORYSA (Q75LD5) Putative ion channel DMI1-like, chloroplast precursor Length = 893 | 4 | -- | --- | 0 | -- | --- | 0 |
| bastl12g06 | 70 | BY855037 | not_full | ref|XM_415738.1| PREDICTED: Gallus gallus similar to eukaryotic translation initiation factor 4H isoform 1 (LOC417490), mRNA Length = 2853 | 20 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl12g05 | 370 | BY855036 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 157 | not_full | THYX_CORDI (Q6NGP3) Thymidylate synthase thyX (EC 2.1.1.148) (TS) (TSase) Length = 252 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl12g04 | 376 | BY855035 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 500 | not_full | NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4 (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3) (NF-AT3) Length = 902 | 20 | -- | --- | 0 | -- | --- | 0 |
| bastl12g03 | 368 | BY855034 | not_full | gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 | 500 | not_full | FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 Length = 959 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl12g02 | 361 | BY855033 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 11 | not_full | SDE3_ARATH (Q8GYD9) Probable RNA helicase SDE3 (EC 3.6.1.-) (Silencing defective protein 3) Length = 1002 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl12g01 | 333 | BY855032 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 146 | not_full | MADCA_HUMAN (Q13477) Mucosal addressin cell adhesion molecule 1 precursor (MAdCAM-1) (hMAdCAM-1) Length = 406 | 11 | -- | --- | 0 | -- | --- | 0 |
| bastl12f12 | 478 | BY855031 | not_full | gb|AY111306.1| Zea mays CL10099_1 mRNA sequence Length = 649 | 27 | not_full | BAI1_HUMAN (O14514) Brain-specific angiogenesis inhibitor 1 precursor Length = 1584 | 29 | -- | --- | 0 | -- | --- | 0 |
| bastl12f11 | 381 | BY855030 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 41 | not_full | COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 953 | 33 | -- | --- | 0 | -- | --- | 0 |
| bastl12f10 | 476 | BY855029 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 51 | not_full | TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (EC 1.1.1.102) (3-dehydrosphinganine reductase) (KDS reductase) Length = 969 | 23 | -- | --- | 0 | -- | --- | 0 |
| bastl12f09 | 204 | BY855028 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 409 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl12f08 | 506 | BY855027 | not_full | ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3092 | 139 | not_full | PSD2_HUMAN (Q13200) 26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) (Tumor necrosis factor type 1 receptor-associated protein 2) (55.11 protein) Le | 13 | -- | --- | 0 | -- | --- | 0 |
| bastl12f07 | 212 | BY855026 | not_full | gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete sequence Length = 194387 | 254 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl12f06 | 477 | BY855025 | not_full | ref|XM_479737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3088 | 24 | not_full | CATE_HUMAN (P14091) Cathepsin E precursor (EC 3.4.23.34) Length = 401 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl12f05 | 397 | BY855024 | not_full | gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 | 38 | not_full | DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5) Length = 864 | 30 | -- | --- | 0 | -- | --- | 0 |
| bastl12f04 | 493 | BY855023 | not_full | ref|XM_713540.1| Candida albicans SC5314 hypothetical protein (CaO19_7475), mRNA Length = 3993 | 500 | not_full | ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis thaliana envelope membrane integrase) (Ath4) (ALBINO3-like protein 1) Length = 1013 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl12f03 | 382 | BY855022 | full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 44 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 57 | -- | --- | 0 | -- | --- | 0 |
| bastl12f02 | 466 | BY855021 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 344 | not_full | BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 | 71 | -- | --- | 0 | -- | --- | 0 |
| bastl12f01 | 380 | BY855020 | not_full | ref|XM_515369.1| PREDICTED: Pan troglodytes LOC459112 (LOC459112), mRNA Length = 2067 | 36 | not_full | ATKA_STRAW (Q82PI3) Potassium-transporting ATPase A chain (EC 3.6.3.12) (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 554 | 16 | -- | --- | 0 | -- | --- | 0 |
| bastl12e12 | 340 | BY855019 | not_full | ref|NM_184796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2859 | 25 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl12e11 | 299 | BY855018 | not_full | ref|XM_468330.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2748 | 49 | not_full | MCRA_STRLA (P43485) Mitomycin radical oxidase (EC 1.5.3.-) Length = 447 | 31 | -- | --- | 0 | -- | --- | 0 |
| bastl12e10 | 345 | BY855017 | full | gb|BT009009.1| Triticum aestivum clone wdk3c.pk005.b17:fis, full insert mRNA sequence Length = 1620 | 85 | not_full | AATC_ORYSA (P37833) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) Length = 407 | 69 | -- | --- | 0 | -- | --- | 0 |
| bastl12e09 | 398 | BY855016 | not_full | ref|NM_188339.1| Oryza sativa (japonica cultivar-group), Ozsa8090 predicted mRNA Length = 3249 | 43 | not_full | ANKS1_HUMAN (Q92625) Ankyrin repeat and SAM domain-containing protein 1A (Odin) Length = 1133 | 17 | -- | --- | 0 | -- | --- | 0 |
| bastl12e08 | 221 | BY855015 | full | dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-methionine: L-methionine S-methyltransferase, complete cds Length = 3543 | 183 | not_full | MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S-methyltransferase) (Hv-MMT1) Length = 1088 | 9 | -- | --- | 0 | -- | --- | 0 |
| bastl12e07 | 382 | BY855014 | not_full | gb|AF033096.1|AF033096 Avena sativa nonphototropic hypocotyl 1 (NPH1-1) mRNA, complete cds Length = 3467 | 169 | not_full | PHOT1_ARATH (O48963) Phototropin-1 (EC 2.7.11.1) (Non-phototropic hypocotyl protein 1) (Root phototropism protein 1) Length = 996 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl12e06 | 401 | BY855013 | not_full | dbj|AB179769.1| Oryza sativa (japonica cultivar-group) EXO-1 mRNA for exonuclease-1, complete cds Length = 3110 | 73 | not_full | EXO1_BRARE (Q803U7) Exonuclease 1 (EC 3.1.-.-) (Exonuclease I) Length = 806 | 50 | -- | --- | 0 | -- | --- | 0 |
| bastl12e05 | 428 | BY855012 | full | ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 | 76 | not_full | DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding protein 1a) (DDB1a) Length = 1088 | 29 | -- | --- | 0 | -- | --- | 0 |
| bastl12e04 | 354 | BY855011 | not_full | gb|AF542966.1| Triticum aestivum lon protease-like mRNA, partial sequence Length = 742 | 33 | not_full | LONH1_MAIZE (P93647) Lon protease homolog 1, mitochondrial precursor (EC 3.4.21.-) Length = 885 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl12e03 | 420 | BY855010 | not_full | ref|XM_419250.1| PREDICTED: Gallus gallus similar to RAB-interacting factor (LOC421170), mRNA Length = 687 | 36 | not_full | FGD5_MOUSE (Q80UZ0) FYVE, RhoGEF and PH domain-containing protein 5 Length = 1219 | 17 | -- | --- | 0 | -- | --- | 0 |
| bastl12e02 | 399 | BY855009 | not_full | dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K18, full insert sequence Length = 3073 | 24 | not_full | Y2162_ARATH (O22224) Protein At2g41620 Length = 861 | 21 | -- | --- | 0 | -- | --- | 0 |
| bastl12e01 | 466 | BY855008 | full | gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA, complete cds Length = 2923 | 58 | not_full | MCM2_DROME (P49735) DNA replication licensing factor Mcm2 (Minichromosome maintenance 2 protein) (DmMCM2) Length = 887 | 447 | -- | --- | 0 | -- | --- | 0 |
| bastl12d12 | 388 | BY855007 | full | gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 | 81 | not_full | UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 Length = 1051 | 20 | -- | --- | 0 | -- | --- | 0 |
| bastl12d11 | 394 | BY855006 | not_full | gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 | 29 | not_full | TNPO3_HUMAN (Q9Y5L0) Transportin 3 (Transportin-SR) (TRN-SR) (Importin 12) Length = 975 | 41 | -- | --- | 0 | -- | --- | 0 |
| bastl12d10 | 441 | BY855005 | not_full | ref|XM_470529.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2514 | 25 | not_full | TTL12_HUMAN (Q14166) Tubulin--tyrosine ligase-like protein 12 Length = 644 | 27 | -- | --- | 0 | -- | --- | 0 |
| bastl12d09 | 328 | BY855004 | not_full | ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA Length = 3214 | 191 | not_full | RT23_SCHPO (Q9UR07) Retrotransposable element Tf2 155 kDa protein type 3 Length = 1333 | 9 | -- | --- | 0 | -- | --- | 0 |
| bastl12d08 | 420 | BY855003 | not_full | gb|AC121594.3| Mus musculus BAC clone RP23-297A16 from chromosome 8, complete sequence Length = 209451 | 12 | not_full | MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-protein kinase 1 (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1570 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl12d07 | 351 | BY855002 | not_full | gb|AE004849.1| Pseudomonas aeruginosa PAO1, section 410 of 529 of the complete genome Length = 10113 | 9 | not_full | FUSC3_FUSCU (Q8J1X7) Allergen Fus c 3 Length = 450 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl12d06 | 461 | BY855001 | not_full | ref|XM_472873.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2646 | 116 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl12d05 | 386 | BY855000 | not_full | gb|AF033096.1|AF033096 Avena sativa nonphototropic hypocotyl 1 (NPH1-1) mRNA, complete cds Length = 3467 | 140 | not_full | PHOT1_ARATH (O48963) Phototropin-1 (EC 2.7.11.1) (Non-phototropic hypocotyl protein 1) (Root phototropism protein 1) Length = 996 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl12d04 | 364 | BY854999 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 61 | not_full | POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48) Length = 1874 | 63 | -- | --- | 0 | -- | --- | 0 |
| bastl12d03 | 408 | BY854998 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 500 | not_full | Y1163_HAEIN (Q57252) Protein HI1163 Length = 1027 | 20 | -- | --- | 0 | -- | --- | 0 |
| bastl12d02 | 426 | BY854997 | not_full | dbj|AK102852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110I07, full insert sequence Length = 2992 | 64 | not_full | NCBP1_HUMAN (Q09161) Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (NCBP 80 kDa subunit) (CBP80) Length = 790 | 32 | -- | --- | 0 | -- | --- | 0 |
| bastl12d01 | 412 | BY854996 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 500 | not_full | YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic region Length = 274 | 97 | -- | --- | 0 | -- | --- | 0 |
| bastl12c12 | 354 | BY854995 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 40 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 53 | -- | --- | 0 | -- | --- | 0 |
| bastl12c11 | 439 | BY854994 | not_full | dbj|AK121389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128M19, full insert sequence Length = 3343 | 38 | not_full | VILI2_ARATH (O81644) Villin-2 Length = 976 | 54 | -- | --- | 0 | -- | --- | 0 |
| bastl12c10 | 369 | BY854993 | not_full | dbj|AK102482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094L12, full insert sequence Length = 2770 | 219 | not_full | YNQA_CAEEL (Q21986) Hypothetical protein R13F6.10 in chromosome III Length = 958 | 34 | -- | --- | 0 | -- | --- | 0 |
| bastl12c09 | 423 | BY854992 | not_full | ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3582 | 448 | not_full | NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2) Length = 1267 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl12c08 | 415 | BY854991 | full | ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 | 76 | not_full | DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding protein 1a) (DDB1a) Length = 1088 | 28 | -- | --- | 0 | -- | --- | 0 |
| bastl12c07 | 462 | BY854990 | not_full | gb|AY224547.1| Oryza sativa (japonica cultivar-group) isolate 24091 centromere protein-like protein mRNA, partial cds Length = 1537 | 55 | not_full | RABE2_MOUSE (Q91WG2) Rab GTPase-binding effector protein 2 (Rabaptin-5beta) Length = 511 | 144 | -- | --- | 0 | -- | --- | 0 |
