ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbaak4g16 | 554 | AV912537 | not_full | gb|AY224466.1| Oryza sativa (japonica cultivar-group) isolate 23949 heat shock-related protein mRNA, partial cds Length = 1257 | 68 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 312 | -- | --- | - | -- | --- | - |
| rbaak4g15 | 577 | AV912536 | not_full | dbj|AK071846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O09, full insert sequence Length = 1576 | 193 | not_full | MBN_DROME (P52302) Protein lethal(3)malignant blood neoplasm 1 (Mbn(83)) Length = 653 | 3 | -- | --- | - | -- | --- | - |
| rbaak4g14 | 153 | AV832662 | not_full | gb|BC105835.1| Rattus norvegicus cDNA clone IMAGE:7453109 Length = 1805 | 42 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4g13 | 418 | AV912535 | not_full | emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 | 77 | not_full | PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 | 24 | -- | --- | - | -- | --- | - |
| rbaak4g12 | 354 | AV912534 | not_full | gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA, complete cds Length = 990 | 49 | not_full | PSAF_HORVU (P13192) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 235 | 29 | -- | --- | - | -- | --- | - |
| rbaak4g11 | 556 | AV912533 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 426 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 163 | -- | --- | - | -- | --- | - |
| rbaak4g09 | 540 | AV912532 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 442 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 168 | -- | --- | - | -- | --- | - |
| rbaak4g08 | 161 | AV912531 | not_full | gb|AC132448.3| Mus musculus BAC clone RP23-180B23 from chromosome 8, complete sequence Length = 211388 | 10 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4g07 | 448 | AV912530 | not_full | gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 | 454 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 107 | -- | --- | - | -- | --- | - |
| rbaak4g06 | 368 | AV912529 | not_full | emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 | 53 | not_full | CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 | 91 | -- | --- | - | -- | --- | - |
| rbaak4g05 | 638 | AV912528 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 84 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 27 | -- | --- | - | -- | --- | - |
| rbaak4g04 | 659 | AV912527 | not_full | ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 | 500 | not_full | G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) Length = 403 | 263 | -- | --- | - | -- | --- | - |
| rbaak4g03 | 592 | AV912526 | not_full | ref|XM_472379.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 | 33 | not_full | KIFA3_STRPU (Q26626) Kinesin-associated protein 3 (SpKAP115) Length = 828 | 8 | -- | --- | - | -- | --- | - |
| rbaak4g02 | 497 | AV912525 | not_full | gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, complete cds Length = 768 | 90 | not_full | ACP1_HORVU (P02902) Acyl carrier protein 1, chloroplast precursor (Acyl carrier protein I) (ACP I) Length = 149 | 192 | -- | --- | - | -- | --- | - |
| rbaak4g01 | 87 | AV912524 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 186 | not_full | CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 | 73 | -- | --- | - | -- | --- | - |
| rbaak4f24 | 349 | AV912523 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4f23 | 84 | AV912522 | not_full | gb|BT009086.1| Triticum aestivum clone wkm1c.pk005.m4:fis, full insert mRNA sequence Length = 1052 | 17 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4f22 | 534 | AV912521 | not_full | gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 | 68 | not_full | CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) Length = 270 | 9 | -- | --- | - | -- | --- | - |
| rbaak4f21 | 414 | AV912520 | not_full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 341 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 14 | -- | --- | - | -- | --- | - |
| rbaak4f20 | 590 | AV912519 | not_full | ref|XM_476717.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4245 | 100 | not_full | ALDO3_ARATH (Q7G9P4) Abscisic-aldehyde oxidase (EC 1.2.3.14) (Aldehyde oxidase 3) (AtAO-3) (AtAO4) Length = 1332 | 8 | -- | --- | - | -- | --- | - |
| rbaak4f19 | 418 | AV912518 | not_full | gb|AF274001.1|AF274001 Triticum aestivum oxidase (IM1) mRNA, partial cds Length = 1073 | 46 | not_full | AOX4_ARATH (Q56X52) Alternative oxidase 4, chloroplast precursor (EC 1.-.-.-) (Protein IMMUTANS) (Plastid terminal oxidase) Length = 351 | 6 | -- | --- | - | -- | --- | - |
| rbaak4f18 | 413 | AV912517 | not_full | dbj|AK120879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J05, full insert sequence Length = 504 | 40 | not_full | PSA_DICDI (P12729) Prespore-specific cell surface antigen PsA precursor (D19 protein) Length = 168 | 8 | -- | --- | - | -- | --- | - |
| rbaak4f17 | 341 | AV912516 | not_full | gb|AY838897.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid dioxygenase 1 (NCED1) mRNA, complete cds Length = 2119 | 53 | not_full | RPE65_MOUSE (Q91ZQ5) Retinal pigment epithelium-specific 65 kDa protein Length = 532 | 14 | -- | --- | - | -- | --- | - |
| rbaak4f16 | 510 | AV912515 | not_full | ref|XM_480189.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2178 | 35 | not_full | MUTS_BUCAI (P57504) DNA mismatch repair protein mutS Length = 802 | 7 | -- | --- | - | -- | --- | - |
| rbaak4f14 | 234 | AV912514 | not_full | emb|AL513443.1|NC93G11 Neurospora crassa DNA linkage group V Cosmid contig 93G11 Length = 86075 | 5 | not_full | LBD14_ARATH (Q9SJW5) LOB domain protein 14 Length = 188 | 2 | -- | --- | - | -- | --- | - |
| rbaak4f13 | 414 | AV832661 | not_full | emb|Z15116.1|HVPAZXG H.vulgare pazx gene encoding protein zx Length = 3283 | 90 | not_full | PRTZ_HORVU (P06293) Protein Z (Z4) (Major endosperm albumin) Length = 399 | 148 | -- | --- | - | -- | --- | - |
| rbaak4f12 | 614 | AV912513 | not_full | ref|XM_463918.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2037 | 25 | not_full | SCS_SALOF (O81191) 1,8-cineole synthase, chloroplast precursor (EC 4.2.3.-) (SCS) Length = 591 | 37 | -- | --- | - | -- | --- | - |
| rbaak4f11 | 33 | AV832660 | not_full | emb|X66428.1|HVPSANMR H.vulgare mRNA PsaN for photosystem I subunit N Length = 665 | 8 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4f10 | 481 | AV912512 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 41 | not_full | GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 | 23 | -- | --- | - | -- | --- | - |
| rbaak4f08 | 415 | AV912511 | not_full | ref|XM_463527.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 | 72 | not_full | BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript 2) Length = 2157 | 4 | -- | --- | - | -- | --- | - |
| rbaak4f07 | 150 | AV912510 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 474 | -- | --- | - | -- | --- | - |
| rbaak4f06 | 593 | AV912509 | not_full | gb|AY107427.1| Zea mays PCO072151 mRNA sequence Length = 539 | 86 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4f04 | 485 | AV912508 | not_full | emb|Z34269.1|HVBKACPS4 H.vulgare (pMaW25) mRNA for beta-ketoacyl-ACP synthase Length = 2380 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4f03 | 332 | AV912507 | not_full | dbj|AB218888.1| Hordeum vulgare CAX mRNA for cation/H+ exchanger, complete cds Length = 1300 | 13 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4f02 | 426 | AV912506 | not_full | gb|BT018346.1| Zea mays clone EL01T0403D12.c mRNA sequence Length = 681 | 44 | not_full | SYM_STRCO (Q9F2I9) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) Length = 538 | 12 | -- | --- | - | -- | --- | - |
| rbaak4f01 | 334 | AV832659 | not_full | gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 | 19 | not_full | MRPD_BACPF (Q9RGZ2) Na(+)/H(+) antiporter subunit D (Multiple resistance and pH homeostasis protein D) (Mrp complex subunit D) Length = 493 | 12 | -- | --- | - | -- | --- | - |
| rbaak4e24 | 668 | AV912505 | not_full | emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 | 411 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 158 | -- | --- | - | -- | --- | - |
| rbaak4e23 | 539 | AV912504 | not_full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 344 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 17 | -- | --- | - | -- | --- | - |
| rbaak4e22 | 561 | AV912503 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 55 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 25 | -- | --- | - | -- | --- | - |
| rbaak4e21 | 643 | AV912502 | not_full | ref|XM_468402.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1592 | 63 | not_full | NDUA9_NEUCR (P25284) NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-40KD) (CI-40KD) Length = 375 | 15 | -- | --- | - | -- | --- | - |
| rbaak4e20 | 381 | AV912501 | not_full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 314 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 9 | -- | --- | - | -- | --- | - |
| rbaak4e18 | 600 | AV912500 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbaak4e17 | 516 | AV912499 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 400 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 159 | -- | --- | - | -- | --- | - |
| rbaak4e16 | 452 | AV912498 | full | emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 | 490 | not_full | CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor (LHCII type I CAB-25) (LHCP) Length = 266 | 182 | -- | --- | - | -- | --- | - |
| rbaak4e15 | 618 | AV912497 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 459 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 163 | -- | --- | - | -- | --- | - |
| rbaak4e14 | 264 | AV832658 | not_full | gb|AC007461.8|AC007461 Homo sapiens chromosome 17, clone 84_E_24, complete sequence Length = 180385 | 11 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbaak4e13 | 317 | AV832657 | not_full | gb|AC080172.5| Homo sapiens chromosome 11, clone CTC-790M5, complete sequence Length = 152435 | 13 | not_full | TFH47_SCHPO (O74995) TFIIH basal transcription factor complex p47 subunit (Suppressor of stem-loop protein 1 homolog) (SSL1 homolog) Length = 421 | 4 | -- | --- | - | -- | --- | - |
| rbaak4e11 | 522 | AV912496 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 406 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 159 | -- | --- | - | -- | --- | - |
| rbaak4e10 | 603 | AV912495 | not_full | gb|AY335488.1| Oryza sativa (japonica cultivar-group) enolase (Eno1) mRNA, complete cds Length = 1659 | 500 | not_full | ENO2_MAIZE (P42895) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lyase 2) Length = 446 | 292 | -- | --- | - | -- | --- | - |
| rbaak4e09 | 346 | AV912494 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_ISOTA (P92463) Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 466 | 500 | -- | --- | - | -- | --- | - |
