ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbah59g03 | 695 | BJ552742 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 53 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 69 | -- | --- | - | -- | --- | - |
| rbah59g02 | 587 | BJ485949 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 405 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 158 | -- | --- | - | -- | --- | - |
| rbah59g01 | 561 | BJ485948 | not_full | ref|XM_550563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 | 54 | not_full | OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7) Length = 766 | 28 | -- | --- | - | -- | --- | - |
| rbah59f24 | 664 | BJ485947 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 55 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59f23 | 619 | BJ485946 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 433 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 165 | -- | --- | - | -- | --- | - |
| rbah59f21 | 591 | BJ485945 | not_full | ref|XM_467362.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1371 | 25 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59f20 | 517 | BJ485944 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 74 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 24 | -- | --- | - | -- | --- | - |
| rbah59f18 | 598 | BJ485943 | not_full | ref|XM_471018.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 | 123 | not_full | ADPN_HUMAN (Q9NST1) Adiponutrin (iPLA2-epsilon) (Calcium-independent phospholipase A2-epsilon) (Patatin-like phospholipase domain-containing protein 3) [Includes: Triacylglycerol lipase (EC 3.1.1.3); Acylglycerol O-acyltransferase (EC 2.3.1.-)] Length = 4 | 2 | -- | --- | - | -- | --- | - |
| rbah59f17 | 544 | BJ485942 | not_full | ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 | 83 | not_full | GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 | 345 | -- | --- | - | -- | --- | - |
| rbah59f16 | 524 | BJ485941 | not_full | emb|CR626934.1| Triticum aestivum Length = 94398 | 44 | not_full | YM39_YEAST (Q03829) Putative mitochondrial carrier YMR166C Length = 368 | 5 | -- | --- | - | -- | --- | - |
| rbah59f14 | 600 | BJ485940 | not_full | dbj|AK111792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099N07, full insert sequence Length = 852 | 74 | not_full | YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5NULLregion of gyrA and gyrB (ORF 3) Length = 437 | 22 | -- | --- | - | -- | --- | - |
| rbah59f12 | 647 | BJ552741 | not_full | emb|AJ005840.1|TAE5840 Triticum aestivum mRNA for thioredoxin M Length = 781 | 179 | not_full | TRXM_WHEAT (Q9ZP21) Thioredoxin M-type, chloroplast precursor (TRX-M) Length = 175 | 295 | -- | --- | - | -- | --- | - |
| rbah59f11 | 316 | BJ485939 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 73 | not_full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 31 | -- | --- | - | -- | --- | - |
| rbah59f09 | 660 | BJ485938 | not_full | gb|AY106405.1| Zea mays PCO131557 mRNA sequence Length = 797 | 29 | not_full | RNF12_MOUSE (Q9WTV7) RING finger protein 12 (LIM domain-interacting RING finger protein) (RING finger LIM domain-binding protein) (R-LIM) Length = 600 | 268 | -- | --- | - | -- | --- | - |
| rbah59f07 | 528 | BJ485937 | not_full | gb|AY103941.1| Zea mays PCO095480 mRNA sequence Length = 1596 | 164 | not_full | CARB_CAUCR (Q9A4D6) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 1099 | 2 | -- | --- | - | -- | --- | - |
| rbah59f06 | 266 | BJ485936 | not_full | gb|AC010995.11|AC010995 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone BACR30C16, complete sequence Length = 185810 | 10 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59f05 | 376 | BJ485935 | not_full | gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3NULL end Length = 1394 | 61 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 36 | -- | --- | - | -- | --- | - |
| rbah59f03 | 313 | BJ485934 | not_full | gb|AY224466.1| Oryza sativa (japonica cultivar-group) isolate 23949 heat shock-related protein mRNA, partial cds Length = 1257 | 20 | not_full | SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (MSal-2) Length = 1004 | 5 | -- | --- | - | -- | --- | - |
| rbah59f02 | 620 | BJ485933 | not_full | dbj|AK101717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060O03, full insert sequence Length = 3342 | 36 | not_full | VPS18_BRARE (P59015) Vacuolar protein sorting 18 Length = 974 | 11 | -- | --- | - | -- | --- | - |
| rbah59e23 | 582 | BJ485932 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 407 | not_full | RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 | 161 | -- | --- | - | -- | --- | - |
| rbah59e22 | 257 | BJ552740 | not_full | gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3 (SAP-3) mRNA, complete cds Length = 1132 | 20 | not_full | ERBB2_MESAU (Q60553) Receptor tyrosine-protein kinase erbB-2 precursor (EC 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) Length = 1254 | 10 | -- | --- | - | -- | --- | - |
| rbah59e21 | 545 | BJ552739 | not_full | gb|L11740.1|BLYEFIA Barley elongation factor 1 alpha, (EF-1A) mRNA sequence Length = 1725 | 500 | not_full | EF1A2_HORVU (Q40034) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 160 | -- | --- | - | -- | --- | - |
| rbah59e20 | 547 | BJ485931 | not_full | gb|AF475102.1| Triticum aestivum tat binding protein mRNA, partial cds Length = 564 | 163 | not_full | PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) Length = 424 | 238 | -- | --- | - | -- | --- | - |
| rbah59e19 | 563 | BJ485930 | not_full | emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 | 45 | not_full | TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC 2.7.11.1) Length = 942 | 3 | -- | --- | - | -- | --- | - |
| rbah59e18 | 430 | BJ485929 | not_full | gb|AY846831.1| Triticum aestivum ribosomal protein S29 mRNA, complete cds Length = 398 | 88 | not_full | RS29_GRIJA (Q7XYB0) 40S ribosomal protein S29 Length = 56 | 72 | -- | --- | - | -- | --- | - |
| rbah59e17 | 162 | BJ485928 | not_full | gb|AF020791.1|AF020791 Hordeum vulgare ferrochelatase (hemH) gene, complete cds Length = 7694 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59e16 | 113 | BJ485927 | not_full | gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 | 13 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59e14 | 550 | BJ485926 | not_full | ref|XM_466148.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2385 | 32 | not_full | YAOF_SCHPO (Q10094) Hypothetical protein C11D3.15 in chromosome I Length = 1317 | 16 | -- | --- | - | -- | --- | - |
| rbah59e13 | 236 | BJ485925 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 65 | not_full | MAN2_DROME (Q24451) Alpha-mannosidase 2 (EC 3.2.1.114) (Alpha-mannosidase II) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (AMAN II) Length = 1108 | 5 | -- | --- | - | -- | --- | - |
| rbah59e10 | 519 | BJ552738 | not_full | emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide pyrophosphatase/phosphodiesterase (npp gene) Length = 1268 | 325 | not_full | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) Length = 368 | 7 | -- | --- | - | -- | --- | - |
| rbah59e04 | 303 | BJ552737 | not_full | ref|XM_462353.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G19877g) partial mRNA Length = 1419 | 500 | not_full | CCMF_BRAJA (P45403) Cytochrome c-type biogenesis protein cycK Length = 660 | 5 | -- | --- | - | -- | --- | - |
| rbah59e03 | 682 | BJ485924 | not_full | gb|AY123422.1| Triticum aestivum putative Rieske Fe-S precursor protein mRNA, complete cds Length = 866 | 119 | not_full | UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 222 | 107 | -- | --- | - | -- | --- | - |
| rbah59d24 | 176 | BJ552736 | not_full | gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 | 35 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59d23 | 145 | BJ485923 | not_full | gb|AF343492.1| Aegilops speltoides subsp. speltoides clone pla2 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1457 | 500 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah59d22 | 301 | BJ552735 | not_full | ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1469 | 23 | not_full | ATPG_TOBAC (P29790) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) Length = 377 | 230 | -- | --- | - | -- | --- | - |
| rbah59d21 | 610 | BJ485922 | not_full | emb|X02352.1|MITACYB Wheat mitochondrial gene for apocytochrome b Length = 1943 | 124 | not_full | CYB_MAIZE (P04165) Cytochrome b Length = 388 | 500 | -- | --- | - | -- | --- | - |
| rbah59d20 | 178 | BJ485921 | not_full | ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 | 207 | not_full | CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) Length = 263 | 72 | -- | --- | - | -- | --- | - |
| rbah59d17 | 374 | BJ485920 | not_full | emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene) Length = 852 | 43 | not_full | RS7_HORVU (Q949H0) 40S ribosomal protein S7 Length = 191 | 43 | -- | --- | - | -- | --- | - |
| rbah59d16 | 429 | BJ485919 | not_full | dbj|AK104352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G10, full insert sequence Length = 1129 | 57 | not_full | CH10C_ARATH (O65282) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20) Length = 253 | 249 | -- | --- | - | -- | --- | - |
| rbah59d15 | 533 | BJ552734 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 40 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 27 | -- | --- | - | -- | --- | - |
| rbah59d14 | 436 | BJ552733 | not_full | gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04, complete sequence Length = 168424 | 32 | not_full | DNAJ_MESFL (Q6F150) Chaperone protein dnaJ Length = 374 | 9 | -- | --- | - | -- | --- | - |
| rbah59d13 | 379 | BJ485918 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 60 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 26 | -- | --- | - | -- | --- | - |
| rbah59d10 | 493 | BJ552732 | not_full | dbj|AK061872.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A05, full insert sequence Length = 1080 | 51 | not_full | CK5P1_HUMAN (Q96SZ6) CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42) Length = 601 | 6 | -- | --- | - | -- | --- | - |
| rbah59d08 | 336 | BJ552731 | not_full | ref|XM_472667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 885 | 500 | not_full | H3_WHEAT (P68428) Histone H3 Length = 135 | 128 | -- | --- | - | -- | --- | - |
| rbah59d07 | 355 | BJ485917 | not_full | gb|AC118230.6| Mus musculus chromosome 10, clone RP23-462F16, complete sequence Length = 204781 | 22 | not_full | Y4618_METAC (Q8THA2) UPF0313 protein MA4618 Length = 742 | 20 | -- | --- | - | -- | --- | - |
| rbah59d04 | 631 | BJ485916 | not_full | gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3NULL end Length = 1394 | 118 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 27 | -- | --- | - | -- | --- | - |
| rbah59d02 | 439 | BJ485915 | not_full | ref|NM_191878.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 | 18 | not_full | GAT1B_XENLA (P23768) GATA-binding factor 1-B (Transcription factor xGATA-1B) Length = 364 | 35 | -- | --- | - | -- | --- | - |
| rbah59d01 | 611 | BJ485914 | not_full | ref|XM_481940.1| Oryza sativa (japonica cultivar-group), mRNA Length = 761 | 94 | not_full | RS17_GEOMG (Q39XZ7) 30S ribosomal protein S17 Length = 85 | 321 | -- | --- | - | -- | --- | - |
| rbah59c24 | 436 | BJ485913 | not_full | gb|AF343492.1| Aegilops speltoides subsp. speltoides clone pla2 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1457 | 145 | not_full | ILL6_ARATH (Q8VYX0) IAA-amino acid hydrolase ILR1-like 6 precursor (EC 3.5.1.-) (Protein gr1) Length = 464 | 46 | -- | --- | - | -- | --- | - |
| rbah59c23 | 228 | BJ485912 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 38 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 7 | -- | --- | - | -- | --- | - |
