>gb|AC118230.6| Mus musculus chromosome 10, clone RP23-462F16, complete sequence
          Length = 204781

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 241   aaaatatgaacaggtcaccattta 264
             ||||||||||||||||||||||||
Sbjct: 26779 aaaatatgaacaggtcaccattta 26802

>gb|AC159653.8| Mus musculus 10 BAC RP23-479H2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 168480

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 241   aaaatatgaacaggtcaccattta 264
             ||||||||||||||||||||||||
Sbjct: 73118 aaaatatgaacaggtcaccattta 73095

>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence
          Length = 194800

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 255   tcaccatttacagaagctagg 275
             |||||||||||||||||||||
Sbjct: 22801 tcaccatttacagaagctagg 22821

>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence
          Length = 177161

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 255    tcaccatttacagaagctagg 275
              |||||||||||||||||||||
Sbjct: 169774 tcaccatttacagaagctagg 169794

>emb|AL592047.10| Human DNA sequence from clone RP11-506C15 on chromosome 9 Contains a NADH
              dehydrogenase 2 (MTND2) pseudogene, complete sequence
          Length = 153369

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    ggccaggaacaatcagctcta 233
              |||||||||||||||||||||
Sbjct: 149037 ggccaggaacaatcagctcta 149057

>emb|AL449363.12| Human DNA sequence from clone CTA-444M12 on chromosome 6 Contains the
             5' part of the SLC2A12 gene for solute carrier family 2
             (facilitated glucose transporter) member 12 and a
             high-mobility group (nonhistone chromosomal) protein
             variants I and Y (HMGIY) pseudogene, complete sequence
          Length = 141289

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 157   tggttttgtttctttggtgcc 177
             |||||||||||||||||||||
Sbjct: 65684 tggttttgtttctttggtgcc 65664

>gb|AC160987.4| Mus musculus BAC clone RP23-248O24 from chromosome 16, complete
             sequence
          Length = 202729

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     taacataactaagtcctgct 21
             ||||||||||||||||||||
Sbjct: 95673 taacataactaagtcctgct 95692

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 95      aagagtaatcaggttcatcatctgcatcaacaaaca 130
               |||| |||| ||||| |||||| |||||||||||||
Sbjct: 4289106 aagaataattaggttgatcatcagcatcaacaaaca 4289071

>gb|AC146542.2| Gasterosteus aculeatus clone CH213-58L3, complete sequence
          Length = 231097

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    tccaccaaaaatgcactaactgtt 44
             ||||||| ||||||||||||||||
Sbjct: 92580 tccaccacaaatgcactaactgtt 92603

>emb|AL136315.9| Human DNA sequence from clone RP4-717B15 on chromosome 6, complete
             sequence
          Length = 92698

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tgaataaatggttttgtttc 168
             ||||||||||||||||||||
Sbjct: 34719 tgaataaatggttttgtttc 34738

>emb|AL121985.13|HSA404F10 Human DNA sequence from clone RP11-404F10 on chromosome 1q23.1-24.1
             Contains the 5' end of the SLAMF1 gene for signaling
             lymphocytic activation molecule family member 1, a SET
             translocation (myeloid leukemia-associated) (SET)
             pseudogene, a novel gene, the CD48 gene for CD48 antigen
             (B-cell membrane protein), the SLAMF7 gene for SLAM family
             member 7 and the 5' end of the LY9 gene for lymphocyte
             antigen 9, complete sequence
          Length = 195976

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   caaaaatatgaacaggtcac 258
             ||||||||||||||||||||
Sbjct: 50990 caaaaatatgaacaggtcac 50971

>gb|AE014182.1| Mus musculus piebald deletion region section 10 of 11 of the complete
              sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    aatggttttgtttctttggt 174
              ||||||||||||||||||||
Sbjct: 336851 aatggttttgtttctttggt 336870

>gb|AC013251.19| Homo sapiens 3 BAC RP11-38P22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 176251

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   acaggtcaccatttacagaa 269
             ||||||||||||||||||||
Sbjct: 17027 acaggtcaccatttacagaa 17046

>gb|AC156832.2| Mus musculus BAC clone RP24-212B22 from chromosome 9, complete sequence
          Length = 181683

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 134    gaaccatgtcactggtgaataaat 157
              ||||||||||||||| ||||||||
Sbjct: 113997 gaaccatgtcactggagaataaat 114020

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 95      aagagtaatcaggttcatcatctgcatcaacaaaca 130
               |||| |||| ||||| |||||| |||||||||||||
Sbjct: 4289221 aagaataattaggttgatcatcagcatcaacaaaca 4289186

>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ccaaaaatgcactaactgtt 44
              ||||||||||||||||||||
Sbjct: 152750 ccaaaaatgcactaactgtt 152769

>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 265     cagaagctaggaagattggg 284
               ||||||||||||||||||||
Sbjct: 1187326 cagaagctaggaagattggg 1187345

>gb|AF011226.1|AF011226 Borrelia burgdorferi superoxide dismutase (sod) and
            glucosamine-6-phosphate isomerase (nagB) genes, complete
            cds
          Length = 1923

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ccaaaaatgcactaactgtt 44
            ||||||||||||||||||||
Sbjct: 1376 ccaaaaatgcactaactgtt 1357

>gb|AY106383.1| Zea mays PCO135963 mRNA sequence
          Length = 665

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  aatgcactaactgttcctgt 49
           ||||||||||||||||||||
Sbjct: 376 aatgcactaactgttcctgt 357

>gb|AC116475.7| Mus musculus chromosome 8, clone RP23-386N2, complete sequence
          Length = 184741

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   atggttttgtttctttggtg 175
             ||||||||||||||||||||
Sbjct: 71806 atggttttgtttctttggtg 71825

>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15,
              complete sequence
          Length = 134307

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 95     aagagtaatcaggttcatcatctgcatcaacaaaca 130
              |||| |||| ||||| |||||| |||||||||||||
Sbjct: 117721 aagaataattaggttgatcatcagcatcaacaaaca 117686

>gb|AC154270.2| Mus musculus BAC clone RP24-259O16 from chromosome 14, complete sequence
          Length = 177522

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    aatggttttgtttctttggt 174
              ||||||||||||||||||||
Sbjct: 161685 aatggttttgtttctttggt 161666


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,858,850
Number of Sequences: 3902068
Number of extensions: 3858850
Number of successful extensions: 72652
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72539
Number of HSP's gapped (non-prelim): 113
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)