ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bastl24g08 | 54 | BY855989 | not_full | ref|NM_185417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 | 28 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24g07 | 188 | BY855988 | not_full | gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 | 41 | not_full | CT055_MOUSE (Q8R184) Protein C20orf55 homolog Length = 296 | 18 | -- | --- | 0 | -- | --- | 0 |
| bastl24g06 | 157 | BY855987 | not_full | ref|XM_474158.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 | 18 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24g05 | 331 | BY855986 | not_full | dbj|AK101520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046K22, full insert sequence Length = 2513 | 18 | not_full | NDRG1_MOUSE (Q62433) Protein NDRG1 (N-myc downstream-regulated gene 1 protein) (Protein Ndr1) Length = 394 | 34 | -- | --- | 0 | -- | --- | 0 |
| bastl24g04 | 268 | BY855985 | not_full | ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3139 | 24 | not_full | YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III Length = 776 | 33 | -- | --- | 0 | -- | --- | 0 |
| bastl24g03 | 404 | BY855984 | not_full | dbj|AK072121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122J23, full insert sequence Length = 3145 | 77 | not_full | PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 | 34 | -- | --- | 0 | -- | --- | 0 |
| bastl24g01 | 179 | BY855983 | not_full | gb|AF338167.1| Bradyrhizobium sp. USDA 4421 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 1452 | 315 | not_full | SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein osterix) (C22) Length = 428 | 4 | -- | --- | 0 | -- | --- | 0 |
| bastl24f10 | 336 | BY855982 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 149 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24f09 | 222 | BY855981 | full | ref|XM_465993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 720 | 305 | not_full | DHON_METGL (P37144) Homoserine dehydrogenase (EC 1.1.1.3) (HDH) Length = 412 | 14 | -- | --- | 0 | -- | --- | 0 |
| bastl24f08 | 284 | BY855980 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 35 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 36 | -- | --- | 0 | -- | --- | 0 |
| bastl24f07 | 190 | BY855979 | not_full | gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 | 30 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24f06 | 425 | BY855978 | full | emb|X60343.1|HVGADPH H.vulgare GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 1365 | 500 | not_full | G3PX_HORVU (P26517) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) Length = 337 | 309 | -- | --- | 0 | -- | --- | 0 |
| bastl24f05 | 260 | BY855977 | not_full | dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 | 26 | not_full | MURC_CHLTE (Q8KGD5) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 475 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl24f04 | 363 | BY855976 | full | gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 | 15 | not_full | LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12) (LOX-100) (LOX2:Hv:1) Length = 936 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl24f02 | 246 | BY855975 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 28 | not_full | GATA3_XENLA (P23773) GATA-binding factor 3 (Transcription factor xGATA-3) Length = 435 | 3 | -- | --- | 0 | -- | --- | 0 |
| bastl24f01 | 318 | BY855974 | not_full | ref|XM_477026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3193 | 40 | not_full | ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell protein 0) Length = 532 | 16 | -- | --- | 0 | -- | --- | 0 |
| bastl24e12 | 124 | BY855973 | not_full | emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in linkage group 12, complete sequence Length = 192457 | 33 | not_full | PCX1_FUGRU (Q98UF7) Pecanex-like protein 1 (Pecanex homolog) Length = 1703 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl24e11 | 55 | BY855972 | not_full | gb|AC154777.2| Mus musculus BAC clone RP24-459H24 from 14, complete sequence Length = 155730 | 30 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24e08 | 365 | BY855971 | not_full | ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 | 83 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 238 | -- | --- | 0 | -- | --- | 0 |
| bastl24e06 | 279 | BY855970 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 26 | not_full | COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 953 | 18 | -- | --- | 0 | -- | --- | 0 |
| bastl24e04 | 300 | BY855969 | not_full | ref|XM_473156.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3261 | 28 | not_full | ADA2B_DUGDU (O77713) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor) (Alpha-2B adrenoreceptor) (Fragment) Length = 390 | 18 | -- | --- | 0 | -- | --- | 0 |
| bastl24e03 | 322 | BY855968 | full | dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane proton-translocating inorganic pyrophosphatase, complete cds Length = 2649 | 500 | not_full | AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 | 3 | -- | --- | 0 | -- | --- | 0 |
| bastl24e02 | 252 | BY855967 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 100 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24e01 | 348 | BY855966 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 19 | not_full | E13A_SOYBN (Q03773) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)3)-beta-glucan endohydrolase)3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 347 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl24d11 | 283 | BY855965 | full | gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 | 60 | not_full | UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 Length = 1051 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl24d10 | 318 | BY855964 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 36 | not_full | SOX13_MOUSE (Q04891) SOX-13 protein Length = 985 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl24d09 | 384 | BY855963 | full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 35 | not_full | LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2) Length = 870 | 80 | -- | --- | 0 | -- | --- | 0 |
| bastl24d08 | 319 | BY855962 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 32 | not_full | SOX13_MOUSE (Q04891) SOX-13 protein Length = 985 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl24d07 | 379 | BY855961 | not_full | ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 | 387 | full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 249 | -- | --- | 0 | -- | --- | 0 |
| bastl24d06 | 41 | BY855960 | not_full | gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 | 1 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24d05 | 354 | BY855959 | full | gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 | 75 | not_full | UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 Length = 1051 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl24d04 | 334 | BY855958 | full | gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 | 80 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 21 | -- | --- | 0 | -- | --- | 0 |
| bastl24d03 | 372 | BY855957 | not_full | dbj|AK099930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118L18, full insert sequence Length = 3398 | 41 | not_full | SOX13_MOUSE (Q04891) SOX-13 protein Length = 985 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl24d02 | 82 | BY855956 | not_full | emb|X55450.1|ACFIXABC A.caulinodans fixABCX genes, involved in nitrogen fixation Length = 4089 | 3 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24c12 | 339 | BY855955 | not_full | gb|AY314060.1| HIV-1 isolate WC10C-9 from USA, complete genome Length = 8964 | 500 | not_full | PHBC_CHRVI (P45370) Poly-beta-hydroxybutyrate polymerase (EC 2.3.1.-) (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synthase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase) (PHA synthase) (Polyhydroxyalkanoic acid synthase) Length = 3 | 23 | -- | --- | 0 | -- | --- | 0 |
| bastl24c11 | 437 | BY855954 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | not_full | TTC15_HUMAN (Q8WVT3) Tetratricopeptide repeat protein 15 (TPR repeat protein 15) Length = 735 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl24c10 | 372 | BY855953 | not_full | dbj|AK119412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-F10, full insert sequence Length = 3621 | 500 | full | EBM_LILLO (Q5H7P5) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein end | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl24c09 | 387 | BY855952 | not_full | gb|AY110865.1| Zea mays CL588_1 mRNA sequence Length = 3331 | 25 | not_full | MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1) Length = 942 | 35 | -- | --- | 0 | -- | --- | 0 |
| bastl24c08 | 371 | BY855951 | full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 34 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 79 | -- | --- | 0 | -- | --- | 0 |
| bastl24c07 | 248 | BY855950 | not_full | gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 | 110 | not_full | ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus (Acinus) Length = 1341 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl24c05 | 473 | BY855949 | not_full | gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 | 463 | not_full | PUR2_WIGBR (Q8D245) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) Length = 434 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl24c04 | 423 | BY855948 | full | ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 | 76 | full | DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding protein 1a) (DDB1a) Length = 1088 | 29 | -- | --- | 0 | -- | --- | 0 |
| bastl24c03 | 412 | BY855947 | not_full | dbj|AK100383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085G23, full insert sequence Length = 3262 | 28 | not_full | STE23_YEAST (Q06010) A-factor-processing enzyme (EC 3.4.99.-) Length = 1027 | 71 | -- | --- | 0 | -- | --- | 0 |
| bastl24c02 | 435 | BY855946 | not_full | gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 | 28 | not_full | MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1) Length = 942 | 24 | -- | --- | 0 | -- | --- | 0 |
| bastl24c01 | 419 | BY855945 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 35 | not_full | LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) Length = 866 | 48 | -- | --- | 0 | -- | --- | 0 |
| bastl24b12 | 346 | BY855944 | not_full | dbj|AK070947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072C12, full insert sequence Length = 2532 | 107 | not_full | CXA3_RAT (P29414) Gap junction alpha-3 protein (Connexin-46) (Cx46) Length = 415 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl24b11 | 353 | BY855943 | not_full | dbj|AK100383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085G23, full insert sequence Length = 3262 | 26 | not_full | STE23_YEAST (Q06010) A-factor-processing enzyme (EC 3.4.99.-) Length = 1027 | 57 | -- | --- | 0 | -- | --- | 0 |
| bastl24b09 | 400 | BY855942 | not_full | gb|AC019240.7|AC019240 Homo sapiens chromosome 18, clone RP11-510D19, complete sequence Length = 175032 | 500 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl24b08 | 246 | BY855941 | not_full | emb|AL627184.18| Mouse DNA sequence from clone RP23-125F21 on chromosome 4, complete sequence Length = 152069 | 43 | not_full | NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2321 | 3 | -- | --- | 0 | -- | --- | 0 |
| bastl24b06 | 448 | BY855940 | not_full | ref|XM_480436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3078 | 70 | not_full | PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA cleavage complex II protein Pcf11) (Fragment) Length = 1654 | 4 | -- | --- | 0 | -- | --- | 0 |
