ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bastl03b01 | 501 | BY854239 | full | gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 | 16 | not_full | LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12) (LOX-100) (LOX2:Hv:1) Length = 936 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl03a11 | 509 | BY854238 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 233 | not_full | CARB_SYNY3 (Q55756) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 1081 | 136 | -- | --- | 0 | -- | --- | 0 |
| bastl03a09 | 487 | BY854237 | not_full | gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, complete sequence Length = 172228 | 42 | not_full | GLYA_ANAMM (Q5PBM8) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine methylase) (SHMT) Length = 430 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl03a07 | 420 | BY854236 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 42 | not_full | LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) Length = 866 | 46 | -- | --- | 0 | -- | --- | 0 |
| bastl03a05 | 406 | BY854235 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 113 | not_full | BCTN5_BOVIN (P19660) Bactenecin-5 precursor (Bac5) (Cathelicidin-2) (PR-42) Length = 176 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl03a01 | 470 | BY854234 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 87 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 500 | -- | --- | 0 | -- | --- | 0 |
| bastl02h11 | 463 | BY854233 | full | gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 | 145 | not_full | CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 | 63 | -- | --- | 0 | -- | --- | 0 |
| bastl02h10 | 435 | BY854232 | not_full | ref|XM_477026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3193 | 52 | not_full | COPG2_MOUSE (Q9QXK3) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2 COP) Length = 871 | 11 | -- | --- | 0 | -- | --- | 0 |
| bastl02h09 | 411 | BY854231 | not_full | ref|XM_464258.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2961 | 500 | not_full | PO24_POPJA (Q03275) Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Retrovirus-related Pol polyprotein from type I retrotransposable element R2) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment) Length = | 4 | -- | --- | 0 | -- | --- | 0 |
| bastl02h08 | 470 | BY854230 | full | ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 | 80 | not_full | DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding protein 1a) (DDB1a) Length = 1088 | 31 | -- | --- | 0 | -- | --- | 0 |
| bastl02h07 | 427 | BY854229 | not_full | ref|XM_473186.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1407 | 24 | not_full | GLYG_MOUSE (Q9R062) Glycogenin-1 (EC 2.4.1.186) Length = 332 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl02h06 | 436 | BY854228 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 41 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 46 | -- | --- | 0 | -- | --- | 0 |
| bastl02h05 | 461 | BY854227 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 90 | not_full | NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)] Length = 868 | 3 | -- | --- | 0 | -- | --- | 0 |
| bastl02h04 | 460 | BY854226 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 27 | full | IMB1_SCHPO (O13864) Importin beta-1 subunit (Karyopherin beta-1 subunit) (Importin 95) Length = 863 | 15 | -- | --- | 0 | -- | --- | 0 |
| bastl02h02 | 459 | BY854225 | not_full | ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3582 | 448 | not_full | NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2) Length = 1267 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl02h01 | 333 | BY854224 | not_full | ref|XM_480436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3078 | 62 | not_full | MASY_GOSHI (P17432) Malate synthase, glyoxysomal (EC 2.3.3.9) Length = 567 | 4 | -- | --- | 0 | -- | --- | 0 |
| bastl02g12 | 442 | BY854223 | not_full | gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 | 298 | not_full | HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine zipper protein ATHB-10) (HD-ZIP protein ATHB-10) Length = 745 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl02g11 | 488 | BY854222 | not_full | ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3534 | 116 | not_full | SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS) Length = 1108 | 17 | -- | --- | 0 | -- | --- | 0 |
| bastl02g10 | 479 | BY854221 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 35 | full | COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 964 | 15 | -- | --- | 0 | -- | --- | 0 |
| bastl02g09 | 237 | BY854220 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 17 | not_full | DAB1_MACFA (Q9BGX5) Disabled homolog 1 Length = 555 | 27 | -- | --- | 0 | -- | --- | 0 |
| bastl02g08 | 473 | BY854219 | not_full | ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 | 500 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 252 | -- | --- | 0 | -- | --- | 0 |
| bastl02g07 | 459 | BY854218 | not_full | gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA, complete cds Length = 2887 | 154 | full | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) Length = 788 | 18 | -- | --- | 0 | -- | --- | 0 |
| bastl02g06 | 445 | BY854217 | not_full | gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome A (PhyA) gene, complete cds Length = 6659 | 500 | not_full | PHYA5_AVESA (P06595) Phytochrome A type 5 (AP5) (Fragment) Length = 494 | 45 | -- | --- | 0 | -- | --- | 0 |
| bastl02g05 | 443 | BY854216 | not_full | ref|NM_197330.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBa0026L12.14), mRNA Length = 1563 | 76 | not_full | C89A2_ARATH (Q42602) Cytochrome P450 89A2 (EC 1.14.-.-) (CYPLXXXIX) (ATH 6-1) Length = 506 | 124 | -- | --- | 0 | -- | --- | 0 |
| bastl02g04 | 432 | BY854215 | not_full | dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 | 48 | not_full | CP6D3_MUSDO (Q964Q7) Cytochrome P450 6d3 (EC 1.14.-.-) (CYPVID3) (Pyrethroid resistance cytochrome P450) Length = 520 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl02g03 | 474 | BY854214 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 121 | not_full | PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6) Length = 1388 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl02g02 | 469 | BY854213 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 128 | not_full | WT1_PIG (O62651) WilmsNULL tumor protein homolog Length = 449 | 155 | -- | --- | 0 | -- | --- | 0 |
| bastl02g01 | 495 | BY854212 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | not_full | SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) Length = 580 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl02f12 | 435 | BY854211 | not_full | ref|XM_468232.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2701 | 125 | not_full | NUDT3_ARATH (Q8L831) Nudix hydrolase 3 (EC 3.6.1.-) (AtNUDT3) Length = 772 | 61 | -- | --- | 0 | -- | --- | 0 |
| bastl02f11 | 456 | BY854210 | full | gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 | 16 | not_full | LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12) (LOX-100) (LOX2:Hv:1) Length = 936 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl02f10 | 490 | BY854209 | not_full | dbj|AK111609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102N10, full insert sequence Length = 3167 | 82 | not_full | CAPSD_FBNY2 (O39831) Capsid protein (CP) (Coat protein) Length = 172 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl02f09 | 459 | BY854208 | not_full | dbj|AK119412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-F10, full insert sequence Length = 3621 | 500 | not_full | EBM_LILLO (Q5H7P5) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein end | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl02f08 | 471 | BY854207 | full | ref|XM_474230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2682 | 275 | not_full | KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin) Length = 182 | 4 | -- | --- | 0 | -- | --- | 0 |
| bastl02f07 | 409 | BY854206 | not_full | dbj|AK121250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101G05, full insert sequence Length = 3548 | 65 | not_full | ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 | 73 | -- | --- | 0 | -- | --- | 0 |
| bastl02f06 | 471 | BY854205 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 96 | not_full | Y551_SYNY3 (P54123) Hypothetical UPF0036 protein slr0551 Length = 640 | 30 | -- | --- | 0 | -- | --- | 0 |
| bastl02f05 | 449 | BY854204 | not_full | dbj|AK070398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048G06, full insert sequence Length = 3440 | 188 | not_full | Y3523_METJA (Q60282) Hypothetical protein MJECL23 Length = 827 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl02f04 | 476 | BY854203 | not_full | dbj|AK102187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086P03, full insert sequence Length = 3307 | 500 | not_full | DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A) (Dynamin-like protein 6) Length = 914 | 94 | -- | --- | 0 | -- | --- | 0 |
| bastl02f03 | 402 | BY854202 | not_full | emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 | 43 | not_full | KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C Length = 1103 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl02f02 | 481 | BY854201 | not_full | ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2370 | 61 | not_full | SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2 Length = 923 | 39 | -- | --- | 0 | -- | --- | 0 |
| bastl02f01 | 87 | BY854200 | not_full | ref|XM_536529.2| PREDICTED: Canis familiaris similar to Sorting nexin-19 (LOC479391), mRNA Length = 3304 | 1 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl02e12 | 443 | BY854199 | not_full | ref|NM_191405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2550 | 500 | not_full | FUT4_RAT (Q62994) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 433 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl02e11 | 429 | BY854198 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 30 | not_full | TNNC1_CHICK (P09860) Troponin C, slow skeletal and cardiac muscles (TN-C) Length = 161 | 20 | -- | --- | 0 | -- | --- | 0 |
| bastl02e10 | 447 | BY854197 | not_full | ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 | 500 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 243 | -- | --- | 0 | -- | --- | 0 |
| bastl02e09 | 453 | BY854196 | not_full | gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 | 70 | not_full | PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core protein precursor (HSPG) (Perlecan) (PLC) Length = 4391 | 11 | -- | --- | 0 | -- | --- | 0 |
| bastl02e08 | 431 | BY854195 | full | gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 | 488 | full | UBC10_ARATH (P35133) Ubiquitin-conjugating enzyme E2-17 kDa 10/12 (EC 6.3.2.19) (Ubiquitin-protein ligase 10/12) (Ubiquitin carrier protein 10/12) Length = 148 | 186 | -- | --- | 0 | -- | --- | 0 |
| bastl02e07 | 417 | BY854194 | not_full | gb|AY049041.1| Triticum aestivum 28S ribosomal RNA gene, partial sequence Length = 3341 | 500 | not_full | CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor Length = 1745 | 67 | -- | --- | 0 | -- | --- | 0 |
| bastl02e03 | 462 | BY854193 | not_full | ref|XM_482923.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2761 | 320 | full | SC23A_MOUSE (Q01405) Protein transport protein Sec23A (SEC23-related protein A) Length = 765 | 34 | -- | --- | 0 | -- | --- | 0 |
| bastl02e02 | 464 | BY854192 | not_full | gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 | 58 | not_full | R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3 Length = 847 | 47 | -- | --- | 0 | -- | --- | 0 |
| bastl02e01 | 437 | BY854191 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 43 | not_full | LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2) Length = 870 | 57 | -- | --- | 0 | -- | --- | 0 |
| bastl02d12 | 471 | BY854190 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 429 | not_full | SEC9_KLULA (Q6CSD1) Protein transport protein SEC9 Length = 556 | 48 | -- | --- | 0 | -- | --- | 0 |
