ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bastl28g08 | 481 | BY856339 | full | ref|NM_188019.1| Oryza sativa (japonica cultivar-group), Ozsa8439 predicted mRNA Length = 2262 | 500 | not_full | FAD21_MYCTU (P63523) Putative fatty-acid--CoA ligase fadD21 (EC 6.2.1.-) (Acyl-CoA synthetase) Length = 578 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl28g07 | 439 | BY856338 | not_full | ref|XM_469034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2662 | 105 | not_full | CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) Length = 753 | 245 | -- | --- | 0 | -- | --- | 0 |
| bastl28g06 | 435 | BY856337 | full | gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 | 10 | not_full | LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12) (LOX-100) (LOX2:Hv:1) Length = 936 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl28g05 | 435 | BY856336 | not_full | ref|NM_191586.2| Oryza sativa (japonica cultivar-group), mRNA Length = 5018 | 40 | not_full | MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44) (Glutathione S-conjugate transporting ATPase 8) (ATP-energized glutathione S-conjugate pump 8) Length = 1466 | 500 | -- | --- | 0 | -- | --- | 0 |
| bastl28g04 | 411 | BY856335 | not_full | emb|Z98047.1|HS162H14 Human DNA sequence from clone RP1-162H14 on chromosome 22, complete sequence Length = 47542 | 18 | not_full | NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of PAS protein 6) (MOP6) Length = 925 | 22 | -- | --- | 0 | -- | --- | 0 |
| bastl28g02 | 385 | BY856334 | not_full | ref|NM_190202.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4065 | 30 | not_full | PUR4_ARATH (Q9M8D3) Probable phosphoribosylformylglycinamidine synthase, chloroplast precursor (EC 6.3.5.3) (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1387 | 48 | -- | --- | 0 | -- | --- | 0 |
| bastl28f12 | 440 | BY856333 | not_full | ref|XM_479642.1| Oryza sativa (japonica cultivar-group), mRNA Length = 246 | 52 | not_full | SASH1_MOUSE (P59808) SAM and SH3 domain-containing protein 1 Length = 1230 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl28f11 | 394 | BY856332 | not_full | gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 | 51 | not_full | FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall adhesin FIG2) Length = 1609 | 4 | -- | --- | 0 | -- | --- | 0 |
| bastl28f10 | 428 | BY856331 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 32 | not_full | COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 964 | 27 | -- | --- | 0 | -- | --- | 0 |
| bastl28f09 | 355 | BY856330 | not_full | dbj|AK121282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108L12, full insert sequence Length = 2972 | 26 | not_full | TRPA_VIBPA (P22095) Tryptophan synthase alpha chain (EC 4.2.1.20) Length = 268 | 16 | -- | --- | 0 | -- | --- | 0 |
| bastl28f08 | 423 | BY856329 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 50 | not_full | NEDD1_HUMAN (Q8NHV4) Protein NEDD1 Length = 660 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl28f07 | 432 | BY856328 | not_full | gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 | 94 | not_full | CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4 (Signal-responsive protein 5) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (AtFIN21) Length = 1016 | 62 | -- | --- | 0 | -- | --- | 0 |
| bastl28f06 | 411 | BY856327 | not_full | gb|DQ004688.1| Oryza sativa (indica cultivar-group) putative LON3 protease mRNA, complete cds Length = 3133 | 125 | full | LONH2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) Length = 964 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl28f05 | 238 | BY856326 | not_full | gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 | 17 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl28f04 | 432 | BY856325 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 146 | not_full | PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9 Length = 736 | 14 | -- | --- | 0 | -- | --- | 0 |
| bastl28f03 | 392 | BY856324 | full | gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 | 79 | not_full | UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1 Length = 1051 | 26 | -- | --- | 0 | -- | --- | 0 |
| bastl28f02 | 467 | BY856323 | full | gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 | 87 | not_full | UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1 Length = 1051 | 22 | -- | --- | 0 | -- | --- | 0 |
| bastl28e12 | 415 | BY856322 | not_full | dbj|AK119412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-F10, full insert sequence Length = 3621 | 500 | full | EBM_LILLO (Q5H7P5) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152) (Endo-beta-mannosidase) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycoprotein end | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl28e11 | 292 | BY856321 | not_full | ref|XM_521470.1| PREDICTED: Pan troglodytes similar to Rho GTPase activating protein 2 (LOC466068), mRNA Length = 2877 | 12 | not_full | PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor Length = 1943 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl28e10 | 422 | BY856320 | not_full | ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3092 | 132 | not_full | PSD2_MOUSE (Q8VDM4) 26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) Length = 908 | 19 | -- | --- | 0 | -- | --- | 0 |
| bastl28e09 | 415 | BY856319 | full | gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 | 90 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 36 | -- | --- | 0 | -- | --- | 0 |
| bastl28e08 | 488 | BY856318 | not_full | dbj|AK100436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088M17, full insert sequence Length = 2965 | 320 | not_full | ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 | 38 | -- | --- | 0 | -- | --- | 0 |
| bastl28e07 | 466 | BY856317 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 43 | not_full | LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) Length = 866 | 23 | -- | --- | 0 | -- | --- | 0 |
| bastl28e06 | 458 | BY856316 | not_full | gb|DQ011286.1| Zea mays Mu killer (Muk) insertion site, genomic sequence Length = 13941 | 500 | not_full | AFAD_HUMAN (P55196) Afadin (AF-6 protein) Length = 1816 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl28e05 | 457 | BY856315 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 34 | not_full | COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 964 | 23 | -- | --- | 0 | -- | --- | 0 |
| bastl28e04 | 453 | BY856314 | not_full | gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 | 62 | not_full | Y080_MYCPN (P75613) Hypothetical protein MG064 homolog (R02_orf1386) Length = 1386 | 3 | -- | --- | 0 | -- | --- | 0 |
| bastl28e03 | 284 | BY856313 | not_full | ref|NM_189435.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 | 66 | not_full | MMP9_HUMAN (P14780) Matrix metalloproteinase-9 precursor (EC 3.4.24.35) (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) [Contains: 67 kDa matrix metalloproteinase-9; 82 kDa matrix metalloproteinase-9] Length = 707 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl28e02 | 475 | BY856312 | full | dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane proton-translocating inorganic pyrophosphatase, complete cds Length = 2649 | 222 | not_full | AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 | 18 | -- | --- | 0 | -- | --- | 0 |
| bastl28e01 | 450 | BY856311 | not_full | ref|XM_481558.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1797 | 46 | full | EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex component Sec8) Length = 1053 | 22 | -- | --- | 0 | -- | --- | 0 |
| bastl28d12 | 321 | BY856310 | not_full | dbj|AK102933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114H16, full insert sequence Length = 3013 | 20 | not_full | UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 | 113 | -- | --- | 0 | -- | --- | 0 |
| bastl28d11 | 470 | BY856309 | not_full | ref|XM_472552.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4320 | 37 | not_full | GRK7_PIG (Q8WP15) G protein-coupled receptor kinase 7 precursor (EC 2.7.11.16) (G protein-coupled receptor kinase GRK7) Length = 553 | 14 | -- | --- | 0 | -- | --- | 0 |
| bastl28d10 | 431 | BY856308 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 32 | not_full | COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 953 | 25 | -- | --- | 0 | -- | --- | 0 |
| bastl28d09 | 479 | BY856307 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 29 | full | DNJB8_HUMAN (Q8NHS0) DnaJ homolog subfamily B member 8 Length = 232 | 378 | -- | --- | 0 | -- | --- | 0 |
| bastl28d08 | 425 | BY856306 | not_full | gb|DQ141104.1| Drosophila ananassae Dscam gene, partial sequence Length = 57036 | 53 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl28d07 | 507 | BY856305 | not_full | ref|XM_474048.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3003 | 32 | not_full | SYD_RALEJ (Q475W2) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS) Length = 602 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl28d06 | 359 | BY856304 | not_full | ref|XM_483801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3145 | 24 | not_full | AMPN_HAEIN (P45274) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) Length = 869 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl28d05 | 254 | BY856303 | full | gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 | 6 | full | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) Length = 788 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl28d04 | 486 | BY856302 | not_full | gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 | 29 | not_full | MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1) Length = 942 | 25 | -- | --- | 0 | -- | --- | 0 |
| bastl28d03 | 388 | BY856301 | not_full | dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full insert sequence Length = 3325 | 54 | not_full | APPA_BACSU (P42061) Oligopeptide-binding protein appA precursor Length = 543 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl28d02 | 484 | BY856300 | not_full | gb|AF305912.1|AF305912 Hordeum vulgare EDR1 (EDR1) mRNA, complete cds Length = 3338 | 500 | not_full | PAG2_PIG (Q29079) Pregnancy-associated glycoprotein 2 precursor (EC 3.4.23.-) (PAG 2) Length = 420 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl28d01 | 462 | BY856299 | not_full | gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 | 28 | not_full | MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1) Length = 942 | 37 | -- | --- | 0 | -- | --- | 0 |
| bastl28c12 | 458 | BY856298 | not_full | dbj|AK073942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075J10, full insert sequence Length = 3038 | 500 | not_full | MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl28c11 | 427 | BY856297 | not_full | dbj|AK099930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118L18, full insert sequence Length = 3398 | 41 | not_full | NIPA_PONPY (Q5R8V9) Nuclear-interacting partner of ALK (Nuclear-interacting partner of anaplastic lymphoma kinase) (Zinc finger C3HC-type protein 1) Length = 502 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl28c10 | 517 | BY856296 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 57 | not_full | LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2) Length = 870 | 48 | -- | --- | 0 | -- | --- | 0 |
| bastl28c09 | 428 | BY856295 | not_full | ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3092 | 164 | not_full | PSD2_MOUSE (Q8VDM4) 26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) Length = 908 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl28c08 | 464 | BY856294 | not_full | dbj|AK071334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090L01, full insert sequence Length = 3709 | 346 | not_full | K125_ARATH (P82266) Probable 125 kDa kinesin-related protein Length = 1056 | 139 | -- | --- | 0 | -- | --- | 0 |
| bastl28c07 | 465 | BY856293 | full | ref|NM_191068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2247 | 332 | not_full | UBP10_HUMAN (Q14694) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15) (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) Length = 798 | 76 | -- | --- | 0 | -- | --- | 0 |
| bastl28c06 | 470 | BY856292 | not_full | dbj|AK119298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E09, full insert sequence Length = 3025 | 68 | full | VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase L | 21 | -- | --- | 0 | -- | --- | 0 |
| bastl28c05 | 457 | BY856291 | not_full | dbj|AK101405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037G17, full insert sequence Length = 3104 | 275 | not_full | EF2_BETVU (O23755) Elongation factor 2 (EF-2) Length = 843 | 500 | -- | --- | 0 | -- | --- | 0 |
| bastl28c04 | 126 | BY856290 | not_full | emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 | 14 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
