ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bastl38h01 | 472 | BY856889 | not_full | ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3549 | 36 | not_full | SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100 co-activator) (100 kDa coactivator) Length = 910 | 15 | -- | --- | 0 | -- | --- | 0 |
| bastl38g12 | 230 | BY856888 | not_full | ref|XM_479900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 | 50 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 42 | -- | --- | 0 | -- | --- | 0 |
| bastl38g11 | 408 | BY856887 | not_full | dbj|AK102537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096I22, full insert sequence Length = 4694 | 500 | not_full | ATG1_ASPFU (Q4WPF2) Serine/threonine-protein kinase atg1 (EC 2.7.11.1) (Autophagy-related protein 1) Length = 973 | 500 | -- | --- | 0 | -- | --- | 0 |
| bastl38g10 | 259 | BY856886 | not_full | ref|NM_195850.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0050M22.6), mRNA Length = 2619 | 91 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl38g09 | 211 | BY856885 | not_full | ref|XM_602219.2| PREDICTED: Bos taurus similar to collagen, type XXVII, alpha 1 (LOC523908), mRNA Length = 3931 | 137 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl38g08 | 433 | BY856884 | not_full | dbj|AK102852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110I07, full insert sequence Length = 2992 | 69 | not_full | NCBP1_HUMAN (Q09161) Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein) (NCBP 80 kDa subunit) (CBP80) Length = 790 | 35 | -- | --- | 0 | -- | --- | 0 |
| bastl38g07 | 466 | BY856883 | not_full | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 | 41 | full | LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) Length = 866 | 39 | -- | --- | 0 | -- | --- | 0 |
| bastl38g06 | 459 | BY856882 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 104 | not_full | TYCB_BREPA (O30408) Tyrocidine synthetase 2 (Tyrocidine synthetase II) [Includes: ATP-dependent proline adenylase (ProA) (Proline activase); ATP-dependent phenylalanine adenylase (PheA) (Phenylalanine activase); ATP-dependent D-phenylalanine adenylase (D | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl38g05 | 429 | BY856881 | not_full | ref|XM_480136.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1818 | 87 | not_full | CVCA_PEA (P13915) Convicilin precursor Length = 571 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl38g03 | 495 | BY856880 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 90 | not_full | GCP3_MOUSE (P58854) Gamma-tubulin complex component 3 (GCP-3) Length = 905 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl38g02 | 358 | BY856879 | full | gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 | 70 | not_full | UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 Length = 1051 | 19 | -- | --- | 0 | -- | --- | 0 |
| bastl38g01 | 248 | BY856878 | full | gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 | 4 | not_full | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) Length = 788 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl38f12 | 359 | BY856877 | full | gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full insert mRNA sequence Length = 2815 | 54 | not_full | I2C4_MOUSE (Q8CJF8) Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4) (Piwi/argonaute family protein meIF2C4) Length = 861 | 9 | -- | --- | 0 | -- | --- | 0 |
| bastl38f11 | 358 | BY856876 | not_full | ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 | 94 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 237 | -- | --- | 0 | -- | --- | 0 |
| bastl38f10 | 178 | BY856875 | not_full | gb|AC161571.11| Mus musculus chromosome 7, clone RP23-403M22, complete sequence Length = 211052 | 26 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl38f09 | 412 | BY856874 | not_full | dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 | 122 | not_full | UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15) (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl38f08 | 435 | BY856873 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 50 | not_full | COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 953 | 95 | -- | --- | 0 | -- | --- | 0 |
| bastl38f07 | 468 | BY856872 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 33 | not_full | ATK3_ARATH (P46875) Kinesin-3 (Kinesin-like protein C) Length = 754 | 24 | -- | --- | 0 | -- | --- | 0 |
| bastl38f06 | 437 | BY856871 | not_full | ref|NM_197282.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0091N21.32), mRNA Length = 1184 | 50 | not_full | TBCD_HUMAN (Q9BTW9) Tubulin-specific chaperone D (Tubulin-folding cofactor D) (Beta-tubulin cofactor D) (tfcD) (SSD-1) Length = 1192 | 51 | -- | --- | 0 | -- | --- | 0 |
| bastl38f05 | 428 | BY856870 | not_full | ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2370 | 57 | not_full | SAPS3_CHICK (Q5F471) SAPS domain family member 3 Length = 873 | 46 | -- | --- | 0 | -- | --- | 0 |
| bastl38f04 | 446 | BY856869 | not_full | emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 | 75 | not_full | PATL2_ARATH (Q56ZI2) Patellin-2 Length = 683 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl38f03 | 436 | BY856868 | not_full | emb|AL118508.27|HSJ737E23 Human DNA sequence from clone RP4-737E23 on chromosome 20p11.1-11.23 Contains the gene complement component C1q receptor (C1QR), a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 123832 | 56 | not_full | RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 | 29 | -- | --- | 0 | -- | --- | 0 |
| bastl38f02 | 428 | BY856867 | not_full | gb|BC036978.1| Mus musculus kelch-like 15 (Drosophila), transcript variant 4, mRNA (cDNA clone IMAGE:4947611), complete cds Length = 1238 | 52 | not_full | GLGB1_STRCO (Q59833) 1,4-alpha-glucan branching enzyme 1 (EC 2.4.1.18) (Glycogen branching enzyme 1) (BE 1) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1) Length = 774 | 85 | -- | --- | 0 | -- | --- | 0 |
| bastl38f01 | 266 | BY856866 | not_full | gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete sequence Length = 171451 | 12 | not_full | UBP13_YEAST (P38187) Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) (Deubiquitinating enzyme 13) Length = 688 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl38e12 | 381 | BY856865 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 16 | not_full | REXO4_CRYNE (Q5KJQ4) RNA exonuclease 4 (EC 3.1.-.-) Length = 408 | 55 | -- | --- | 0 | -- | --- | 0 |
| bastl38e11 | 431 | BY856864 | not_full | gb|AF305912.1|AF305912 Hordeum vulgare EDR1 (EDR1) mRNA, complete cds Length = 3338 | 27 | not_full | YNB9_YEAST (P53975) Hypothetical protein YNL019C precursor Length = 284 | 39 | -- | --- | 0 | -- | --- | 0 |
| bastl38e10 | 464 | BY856863 | not_full | ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3534 | 119 | not_full | SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS) Length = 1108 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl38e09 | 409 | BY856862 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 19 | not_full | RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1) Length = 1109 | 172 | -- | --- | 0 | -- | --- | 0 |
| bastl38e08 | 414 | BY856861 | not_full | ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3549 | 32 | not_full | SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100 co-activator) (100 kDa coactivator) Length = 910 | 11 | -- | --- | 0 | -- | --- | 0 |
| bastl38e07 | 462 | BY856860 | not_full | dbj|AK104881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H01, full insert sequence Length = 1888 | 500 | not_full | SYEP_MOUSE (Q8CGC7) Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1512 | 10 | -- | --- | 0 | -- | --- | 0 |
| bastl38e06 | 448 | BY856859 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 48 | not_full | SLD3_YEAST (P53135) DNA replication regulator SLD3 Length = 668 | 11 | -- | --- | 0 | -- | --- | 0 |
| bastl38e05 | 426 | BY856858 | not_full | dbj|AK102937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J19, full insert sequence Length = 2977 | 23 | full | MC6ZB_XENLA (Q7ZY18) Zygotic DNA replication licensing factor mcm6-B (Zygotic minichromosome maintenance protein 6-B) (zMCM6-B) (zMCM6b) Length = 825 | 35 | -- | --- | 0 | -- | --- | 0 |
| bastl38e04 | 336 | BY856857 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 37 | not_full | Y5541_ARATH (Q9FKP8) ZF-HD homeobox protein At5g65410 Length = 279 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl38e03 | 415 | BY856856 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 500 | not_full | NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4 (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3) (NF-AT3) Length = 902 | 14 | -- | --- | 0 | -- | --- | 0 |
| bastl38e02 | 407 | BY856855 | not_full | gb|AF534907.1| Triticum aestivum sucrose-phosphate synthase 9 mRNA, complete cds Length = 3339 | 183 | not_full | SPS_BETVU (P49031) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1045 | 21 | -- | --- | 0 | -- | --- | 0 |
| bastl38e01 | 280 | BY856854 | full | gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 | 40 | not_full | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) Length = 788 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl38d12 | 472 | BY856853 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 500 | not_full | SSM4_YEAST (P40318) Protein SSM4 Length = 1319 | 26 | -- | --- | 0 | -- | --- | 0 |
| bastl38d11 | 471 | BY856852 | not_full | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 | 36 | not_full | ATK3_ARATH (P46875) Kinesin-3 (Kinesin-like protein C) Length = 754 | 23 | -- | --- | 0 | -- | --- | 0 |
| bastl38d10 | 454 | BY856851 | not_full | ref|NM_186470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2394 | 7 | not_full | ARGC_THETN (Q8R7B8) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 344 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl38d09 | 437 | BY856850 | not_full | emb|AJ507088.1|HVU507088 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein homologue (rga S-112 gene) Length = 4654 | 43 | not_full | RGA4_SOLBU (Q7XA39) Putative disease resistance protein RGA4 (RGA4-blb) Length = 988 | 13 | -- | --- | 0 | -- | --- | 0 |
| bastl38d08 | 438 | BY856849 | not_full | emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 | 13 | not_full | RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc) Length = 509 | 71 | -- | --- | 0 | -- | --- | 0 |
| bastl38d07 | 312 | BY856848 | not_full | gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 | 21 | not_full | APBA3_MOUSE (O88888) Amyloid beta A4 precursor protein-binding family A member 3 (Neuron-specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma) Length = 571 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl38d05 | 442 | BY856847 | not_full | ref|XM_466491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3447 | 51 | full | PMS2_MOUSE (P54279) PMS1 protein homolog 2 (DNA mismatch repair protein PMS2) Length = 859 | 123 | -- | --- | 0 | -- | --- | 0 |
| bastl38d04 | 412 | BY856846 | not_full | gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 | 55 | not_full | R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2 Length = 847 | 69 | -- | --- | 0 | -- | --- | 0 |
| bastl38d03 | 448 | BY856845 | full | gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 | 27 | not_full | LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12) (LOX-100) (LOX2:Hv:1) Length = 936 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl38d02 | 446 | BY856844 | not_full | gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence Length = 25375 | 500 | not_full | RPA2_PONPY (Q5REE8) DNA-directed RNA polymerase I 135 kDa polypeptide (EC 2.7.7.6) (RNA polymerase I subunit 2) (RPA135) Length = 1136 | 42 | -- | --- | 0 | -- | --- | 0 |
| bastl38d01 | 467 | BY856843 | not_full | dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 | 26 | not_full | XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-) Length = 915 | 28 | -- | --- | 0 | -- | --- | 0 |
| bastl38c12 | 143 | BY856842 | not_full | gb|AY104798.1| Zea mays PCO063131 mRNA sequence Length = 546 | 94 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl38c11 | 331 | BY856841 | not_full | ref|NM_184796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2859 | 72 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl38c10 | 396 | BY856840 | not_full | ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 | 168 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 259 | -- | --- | 0 | -- | --- | 0 |
