ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf100a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 763 0.0
2emb|CT830268.1| Oryza sativa (indica cultivar-group) cDNA clone:... 739 0.0
3gb|AY106753.1| Zea mays PCO083390 mRNA sequence 559 e-156
4ref|NM_001067553.1| Oryza sativa (japonica cultivar-group) Os08g... 500 e-138
5dbj|AK099613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 492 e-135
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 256 2e-64
7dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic D... 256 2e-64
8ref|NM_105054.2| Arabidopsis thaliana IMP4 (IMP4) mRNA, complete... 94 1e-15
9gb|AY114605.1| Arabidopsis thaliana putative U3 small nucleolar ... 94 1e-15
10gb|AY093002.1| Arabidopsis thaliana putative U3 small nucleolar ... 94 1e-15
11gb|AY088147.1| Arabidopsis thaliana clone 418 mRNA, complete seq... 94 1e-15
12emb|BX816220.1|CNS0ADVE Arabidopsis thaliana Full-length cDNA Co... 94 1e-15
13emb|BX816669.1|CNS0AD2Y Arabidopsis thaliana Full-length cDNA Co... 94 1e-15
14gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12... 84 1e-12
15gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24... 84 1e-12
16ref|NM_001057982.1| Oryza sativa (japonica cultivar-group) Os03g... 52 0.005
17dbj|AK220798.1| Arabidopsis thaliana mRNA for putative U3 small ... 52 0.005
18gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 52 0.005
19gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 52 0.005
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.005
21dbj|AK108685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.005
22gb|AC113030.5| Mus musculus chromosome 6, clone RP23-211L5, comp... 46 0.31
23gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome 44 1.2
24gb|CP000377.1| Silicibacter sp. TM1040, complete genome 44 1.2
25ref|NM_070003.3| Caenorhabditis elegans ZK795.3 (ZK795.3) mRNA, ... 44 1.2
26emb|Z83246.1|CEZK795 Caenorhabditis elegans Cosmid ZK795, comple... 44 1.2
27gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 42 4.9
28gb|CP000431.1| Rhodococcus sp. RHA1, complete genome 42 4.9
29gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 4.9
30gb|AY811634.1| Schistosoma japonicum SJCHGC08273 protein mRNA, p... 42 4.9
31ref|XM_860563.1| PREDICTED: Canis familiaris hypothetical protei... 42 4.9
32gb|AC093549.1| Drosophila melanogaster 3L BAC RP98-14L10 (Roswel... 42 4.9
33gb|AC004353.1|AC004353 Drosophila melanogaster DNA sequence (P1 ... 42 4.9 
>dbj|AK060859.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F07, full
           insert sequence
          Length = 1212
 Score =  763 bits (385), Expect = 0.0
 Identities = 757/881 (85%)
 Strand = Plus / Plus

                                                                       
Query: 113 ggcgagatgctgcggcggaacacgcggctgcgtcgggagtacctctaccggaagagcctc 172
           ||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||
Sbjct: 81  ggcgagatgctgcggcggaacacgcggctccggcgggagtacctgtaccgcaagagcctc 140

                                                                       
Query: 173 gagggaaaggagcgtcagcactacgagaagaagcgccgcgtccgggaggcgctcgaggag 232
           ||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||| |||
Sbjct: 141 gaggggaaggagcggcagcactacgagaagaagcggcgcctccgggaggcgctcgacgag 200

                                                                       
Query: 233 ggcaagcctatccccaccgagcttcgcaacgaggagctcgccctccgccgggagattgac 292
           || ||||| |||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 201 gggaagcccatccccaccgagctccgcaacgaggagctcgccctccgccgcgagatcgac 260

                                                                       
Query: 293 ctcgacgaccaagaccgggcagttccgaggagtatcatagatgacgagtacgccggcgcc 352
           ||||| ||| | |||   || |||||||||||  |||| |||||||||||||| ||||| 
Sbjct: 261 ctcgaggacaaggactccgctgttccgaggagcctcatcgatgacgagtacgcgggcgcg 320

                                                                       
Query: 353 acgctccgcgagcccaagattctcctgaccacatcccgcaacccgagtgcacccctgact 412
            ||||||||||||||||||| || || ||||| || ||||| || || || ||||| |||
Sbjct: 321 gcgctccgcgagcccaagatcctactcaccacctctcgcaatcccagcgcgcccctcact 380

                                                                       
Query: 413 cagtttgttaaggagctgaaagtggtatttccgaactcacagaggatgaaccgtggtggt 472
           |||||||| |||||||| ||||| || || || ||||| || || |||||||||||||||
Sbjct: 381 cagtttgtcaaggagctcaaagtcgtcttccctaactcgcaaagaatgaaccgtggtggt 440

                                                                       
Query: 473 caggtgatatcagaaatcgttgagtcctgccgatcacacgagatcactgatcttattttg 532
           ||||||||||| ||||| |||||||| ||||| || || || ||||| || ||| |||||
Sbjct: 441 caggtgatatcggaaattgttgagtcttgccgttcgcatgatatcaccgaccttgttttg 500

                                                                       
Query: 533 gtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcatctaccattaggtcca 592
           |||||||| |||||||| ||||| |||||||| || || || ||||| ||||| || |||
Sbjct: 501 gtgcatgaacatcgtggccagcccgatggtttaatcgtctgccatcttccatttgggcca 560

                                                                       
Query: 593 actgcatactttgggttactcaatgtggtaacacggcatgatatcaaagataggaaggcc 652
           |||||||| |||||||| ||||||||||| ||||| || ||||| |||||||||||||||
Sbjct: 561 actgcatattttgggttgctcaatgtggtgacacgccacgatattaaagataggaaggcc 620

                                                                       
Query: 653 atgggcaaaatgtcagaagcttaccctcatttgatactggacaacttcacaactaagact 712
           ||||| |||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||
Sbjct: 621 atgggtaaaatgtcagaagcgtacccccatttaatactagataacttcacaaccaagact 680

                                                                       
Query: 713 ggtgaaaggactgctaatataatgaagcatctttttcctgttccaaagccagactcgaag 772
           ||||||||||||||||||||  | |||||||| ||||| || ||||||||||| || || 
Sbjct: 681 ggtgaaaggactgctaatattgtcaagcatctctttccagtgccaaagccagattcaaaa 740

                                                                       
Query: 773 cgcctaatcacttttgccaatagagatgattatatttctttcaggcatcacatctacgaa 832
           ||  |||| ||||| || || |||||||| || || || |||||||||||| | || |||
Sbjct: 741 cggataattactttcgctaacagagatgactacatctcattcaggcatcacgtatatgaa 800

                                                                       
Query: 833 aaacacggtggccccaaatccattgacctgaaggaggttgggccccgttttgagttgcgg 892
           ||||| |||||||| |||||| ||||||||||||||||||| || || || |||||||| 
Sbjct: 801 aaacatggtggcccaaaatcccttgacctgaaggaggttggccctcgattcgagttgcga 860

                                                                       
Query: 893 ctctaccagatcaaacgaggaactgtggaccaaagcgaagcgcagaacgagtttgtgcta 952
           || || |||||||| ||||||||||| ||||||   || ||||| |||||||||||||||
Sbjct: 861 ctatatcagatcaagcgaggaactgtcgaccaagcggaggcgcaaaacgagtttgtgcta 920

                                                    
Query: 953 aggccatacatgaatactgccaagaagcagaaatcgcttgg 993
            ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 921 cggccatacatgaacacagcgaagaagcaaaaatctcttgg 961
to top
>emb|CT830268.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113L19, full
           insert sequence
          Length = 1178

 Score =  739 bits (373), Expect = 0.0
 Identities = 754/881 (85%)
 Strand = Plus / Plus

                                                                       
Query: 113 ggcgagatgctgcggcggaacacgcggctgcgtcgggagtacctctaccggaagagcctc 172
           ||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||
Sbjct: 69  ggcgagatgctgcggcggaacacgcggctccggcgggagtacctgtaccgcaagagcctc 128

                                                                       
Query: 173 gagggaaaggagcgtcagcactacgagaagaagcgccgcgtccgggaggcgctcgaggag 232
           ||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||| |||
Sbjct: 129 gaggggaaggagcggcagcactacgagaagaagcggcgcctccgggaggcgctcgacgag 188

                                                                       
Query: 233 ggcaagcctatccccaccgagcttcgcaacgaggagctcgccctccgccgggagattgac 292
           || ||||| |||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 189 gggaagcccatccccaccgagctccgcaacgaggagctcgccctccgccgcgagatcgac 248

                                                                       
Query: 293 ctcgacgaccaagaccgggcagttccgaggagtatcatagatgacgagtacgccggcgcc 352
           ||||| ||| | |||   || |||||||||||  |||| ||||| |||||||| ||||| 
Sbjct: 249 ctcgaggacaaggactccgctgttccgaggagcctcatcgatgatgagtacgcgggcgcg 308

                                                                       
Query: 353 acgctccgcgagcccaagattctcctgaccacatcccgcaacccgagtgcacccctgact 412
            ||||||||||||||||||| || || ||||| || ||||| || || || ||||| |||
Sbjct: 309 gcgctccgcgagcccaagatcctactcaccacctctcgcaatcccagcgcgcccctcact 368

                                                                       
Query: 413 cagtttgttaaggagctgaaagtggtatttccgaactcacagaggatgaaccgtggtggt 472
           |||||||| |||||||| ||||| || || || ||||| || || |||||||||||||||
Sbjct: 369 cagtttgtcaaggagctcaaagtcgtcttccctaactcgcaaagaatgaaccgtggtggt 428

                                                                       
Query: 473 caggtgatatcagaaatcgttgagtcctgccgatcacacgagatcactgatcttattttg 532
           ||||| ||||| ||||| |||||||| ||||| || || || ||||| || ||| |||||
Sbjct: 429 caggtaatatcggaaattgttgagtcttgccgttcgcatgatatcaccgaccttgttttg 488

                                                                       
Query: 533 gtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcatctaccattaggtcca 592
           |||||||| |||||||| ||||| |||||||| || || || ||||| ||||| || |||
Sbjct: 489 gtgcatgaacatcgtggccagcccgatggtttaatcgtctgccatcttccatttgggcca 548

                                                                       
Query: 593 actgcatactttgggttactcaatgtggtaacacggcatgatatcaaagataggaaggcc 652
           |||||||| |||||||| ||||||||||| ||||| || ||||| |||||||||||||||
Sbjct: 549 actgcatattttgggttgctcaatgtggtgacacgccacgatattaaagataggaaggcc 608

                                                                       
Query: 653 atgggcaaaatgtcagaagcttaccctcatttgatactggacaacttcacaactaagact 712
           ||||| |||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||
Sbjct: 609 atgggtaaaatgtcagaagcgtacccccatttaatactagataacttcacaaccaagact 668

                                                                       
Query: 713 ggtgaaaggactgctaatataatgaagcatctttttcctgttccaaagccagactcgaag 772
           ||||||||||||||||||||  | |||||||| ||||| || ||||||||||| || || 
Sbjct: 669 ggtgaaaggactgctaatattgtcaagcatctctttccagtgccaaagccagattcaaaa 728

                                                                       
Query: 773 cgcctaatcacttttgccaatagagatgattatatttctttcaggcatcacatctacgaa 832
           ||  |||| ||||| || || |||||||| || || || |||||||||||| | || |||
Sbjct: 729 cggataattactttcgctaacagagatgactacatctcattcaggcatcacgtatatgaa 788

                                                                       
Query: 833 aaacacggtggccccaaatccattgacctgaaggaggttgggccccgttttgagttgcgg 892
           ||||| |||||||| |||||| ||||||||||||||||||| || || || |||||||| 
Sbjct: 789 aaacatggtggcccaaaatcccttgacctgaaggaggttggccctcgattcgagttgcga 848

                                                                       
Query: 893 ctctaccagatcaaacgaggaactgtggaccaaagcgaagcgcagaacgagtttgtgcta 952
           || || |||||||| |||||||| || ||||||   || ||||| |||||||||||||||
Sbjct: 849 ctatatcagatcaagcgaggaaccgtcgaccaagcggaggcgcaaaacgagtttgtgcta 908

                                                    
Query: 953 aggccatacatgaatactgccaagaagcagaaatcgcttgg 993
            ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 909 cggccatacatgaacacagcgaagaagcaaaaatctcttgg 949
to top
>gb|AY106753.1| Zea mays PCO083390 mRNA sequence
          Length = 1245

 Score =  559 bits (282), Expect = e-156
 Identities = 660/786 (83%)
 Strand = Plus / Plus

                                                                        
Query: 196  cgagaagaagcgccgcgtccgggaggcgctcgaggagggcaagcctatccccaccgagct 255
            |||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 264  cgagaagaagcgccggatccgggcggcgctcgaggagggcaagcccatccccaccgagct 323

                                                                        
Query: 256  tcgcaacgaggagctcgccctccgccgggagattgacctcgacgaccaagaccgggcagt 315
             ||||||||||||| || ||| ||  || |||| |||||||| ||||| || ||   |||
Sbjct: 324  ccgcaacgaggagcacgacctgcggaggcagatcgacctcgaggaccaggagcgtcaagt 383

                                                                        
Query: 316  tccgaggagtatcatagatgacgagtacgccggcgccacgctccgcgagcccaagattct 375
            ||| | ||| ||| | ||  ||||||||||    |||||  | || ||||||||||| ||
Sbjct: 384  tcccaagagcatcgttgacaacgagtacgctactgccaccattcgggagcccaagatact 443

                                                                        
Query: 376  cctgaccacatcccgcaacccgagtgcacccctgactcagtttgttaaggagctgaaagt 435
              ||||||| || ||||| || || || ||||| |||||||||||||||||||| || ||
Sbjct: 444  attgaccacttctcgcaatcctagcgcgcccctaactcagtttgttaaggagctcaaggt 503

                                                                        
Query: 436  ggtatttccgaactcacagaggatgaaccgtggtggtcaggtgatatcagaaatcgttga 495
             || || || |||||||| || |||||||||||||| ||||| ||||||||||| || ||
Sbjct: 504  tgtcttcccaaactcacaaagaatgaaccgtggtggacaggtcatatcagaaattgtgga 563

                                                                        
Query: 496  gtcctgccgatcacacgagatcactgatcttattttggtgcatgagcatcgtggtcagcc 555
            | ||||||| ||||| || || || ||||||||| |||| ||||| || |||||||| ||
Sbjct: 564  ggcctgccgctcacatgatataacagatcttattctggtccatgaacaccgtggtcaacc 623

                                                                        
Query: 556  tgatggtttgattgtgtgtcatctaccattaggtccaactgcatactttgggttactcaa 615
            ||||||||||||||| |  |||||||||   ||||||||||||||||||||||| |||||
Sbjct: 624  tgatggtttgattgtctcccatctaccacatggtccaactgcatactttgggttgctcaa 683

                                                                        
Query: 616  tgtggtaacacggcatgatatcaaagataggaaggccatgggcaaaatgtcagaagctta 675
            |||||| ||||| ||||||||||| || |||||| | |||||||||||||||||||||||
Sbjct: 684  tgtggtgacacgtcatgatatcaaggacaggaagacgatgggcaaaatgtcagaagctta 743

                                                                        
Query: 676  ccctcatttgatactggacaacttcacaactaagactggtgaaaggactgctaatataat 735
            ||| ||||| ||||||||||||||| ||||  ||| ||| ||||||||||| | |||  |
Sbjct: 744  cccccatttaatactggacaacttctcaacccagattggcgaaaggactgcaactattct 803

                                                                        
Query: 736  gaagcatctttttcctgttccaaagccagactcgaagcgcctaatcacttttgccaatag 795
            |||||| || |||||||| ||||||||||| || |||||  |||| || ||||| || ||
Sbjct: 804  gaagcacctctttcctgtcccaaagccagattcaaagcgaataattacatttgctaacag 863

                                                                        
Query: 796  agatgattatatttctttcaggcatcacatctacgaaaaacacggtggccccaaatccat 855
            ||| ||||| || ||||||||||||||  | || |||||||  |||||||||||||| ||
Sbjct: 864  agacgattacatctctttcaggcatcatgtatatgaaaaaccaggtggccccaaatcgat 923

                                                                        
Query: 856  tgacctgaaggaggttgggccccgttttgagttgcggctctaccagatcaaacgaggaac 915
            ||||||||||||||| || ||||| || ||||||||||| ||||||||||||| ||||||
Sbjct: 924  tgacctgaaggaggtcggcccccggttcgagttgcggctgtaccagatcaaactaggaac 983

                                                                        
Query: 916  tgtggaccaaagcgaagcgcagaacgagtttgtgctaaggccatacatgaatactgccaa 975
             ||||| ||||  |||||||||| ||||||||||||  |||| ||||| |||||||||||
Sbjct: 984  cgtggaacaaaaggaagcgcagagcgagtttgtgctgcggccctacatcaatactgccaa 1043

                  
Query: 976  gaagca 981
            ||||||
Sbjct: 1044 gaagca 1049



 Score = 50.1 bits (25), Expect = 0.020
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 117 agatgctgcggcggaacacgcggctgcgtcgggagtacctctaccggaagagcctcgagg 176
           ||||||| ||||||||||  || | ||||||||||||||| |||   |||||||||||||
Sbjct: 185 agatgctacggcggaacatacgtcagcgtcgggagtacctgtactccaagagcctcgagg 244

            
Query: 177 g 177
           |
Sbjct: 245 g 245
to top
>ref|NM_001067553.1| Oryza sativa (japonica cultivar-group) Os08g0155000 (Os08g0155000)
           mRNA, complete cds
          Length = 1122

 Score =  500 bits (252), Expect = e-138
 Identities = 543/640 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 cgctccgcgagcccaagattctcctgaccacatcccgcaacccgagtgcacccctgactc 413
           ||||||||||||||||||| || || ||||| || ||||| || || || ||||| ||||
Sbjct: 180 cgctccgcgagcccaagatcctactcaccacctctcgcaatcccagcgcgcccctcactc 239

                                                                       
Query: 414 agtttgttaaggagctgaaagtggtatttccgaactcacagaggatgaaccgtggtggtc 473
           ||||||| |||||||| ||||| || || || ||||| || || ||||||||||||||||
Sbjct: 240 agtttgtcaaggagctcaaagtcgtcttccctaactcgcaaagaatgaaccgtggtggtc 299

                                                                       
Query: 474 aggtgatatcagaaatcgttgagtcctgccgatcacacgagatcactgatcttattttgg 533
           |||||||||| ||||| |||||||| ||||| || || || ||||| || ||| ||||||
Sbjct: 300 aggtgatatcggaaattgttgagtcttgccgttcgcatgatatcaccgaccttgttttgg 359

                                                                       
Query: 534 tgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcatctaccattaggtccaa 593
           ||||||| |||||||| ||||| |||||||| || || || ||||| ||||| || ||||
Sbjct: 360 tgcatgaacatcgtggccagcccgatggtttaatcgtctgccatcttccatttgggccaa 419

                                                                       
Query: 594 ctgcatactttgggttactcaatgtggtaacacggcatgatatcaaagataggaaggcca 653
           ||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 420 ctgcatattttgggttgctcaatgtggtgacacgccacgatattaaagataggaaggcca 479

                                                                       
Query: 654 tgggcaaaatgtcagaagcttaccctcatttgatactggacaacttcacaactaagactg 713
           |||| |||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||
Sbjct: 480 tgggtaaaatgtcagaagcgtacccccatttaatactagataacttcacaaccaagactg 539

                                                                       
Query: 714 gtgaaaggactgctaatataatgaagcatctttttcctgttccaaagccagactcgaagc 773
           |||||||||||||||||||  | |||||||| ||||| || ||||||||||| || || |
Sbjct: 540 gtgaaaggactgctaatattgtcaagcatctctttccagtgccaaagccagattcaaaac 599

                                                                       
Query: 774 gcctaatcacttttgccaatagagatgattatatttctttcaggcatcacatctacgaaa 833
           |  |||| ||||| || || |||||||| || || || |||||||||||| | || ||||
Sbjct: 600 ggataattactttcgctaacagagatgactacatctcattcaggcatcacgtatatgaaa 659

                                                                       
Query: 834 aacacggtggccccaaatccattgacctgaaggaggttgggccccgttttgagttgcggc 893
           |||| |||||||| |||||| ||||||||||||||||||| || || || |||||||| |
Sbjct: 660 aacatggtggcccaaaatcccttgacctgaaggaggttggccctcgattcgagttgcgac 719

                                                                       
Query: 894 tctaccagatcaaacgaggaactgtggaccaaagcgaagcgcagaacgagtttgtgctaa 953
           | || |||||||| ||||||||||| ||||||   || ||||| ||||||||||||||| 
Sbjct: 720 tatatcagatcaagcgaggaactgtcgaccaagcggaggcgcaaaacgagtttgtgctac 779

                                                   
Query: 954 ggccatacatgaatactgccaagaagcagaaatcgcttgg 993
           ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 780 ggccatacatgaacacagcgaagaagcaaaaatctcttgg 819



 Score =  155 bits (78), Expect = 5e-34
 Identities = 105/114 (92%)
 Strand = Plus / Plus

                                                                       
Query: 113 ggcgagatgctgcggcggaacacgcggctgcgtcgggagtacctctaccggaagagcctc 172
           ||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||
Sbjct: 71  ggcgagatgctgcggcggaacacgcggctccggcgggagtacctgtaccgcaagagcctc 130

                                                                 
Query: 173 gagggaaaggagcgtcagcactacgagaagaagcgccgcgtccgggaggcgctc 226
           ||||| |||||||| |||||||||||||||||||| ||| |||||| |||||||
Sbjct: 131 gaggggaaggagcggcagcactacgagaagaagcggcgcctccgggcggcgctc 184
to top
>dbj|AK099613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050A14, full
           insert sequence
          Length = 1124

 Score =  492 bits (248), Expect = e-135
 Identities = 542/640 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 cgctccgcgagcccaagattctcctgaccacatcccgcaacccgagtgcacccctgactc 413
           ||||||||||||| ||||| || || ||||| || ||||| || || || ||||| ||||
Sbjct: 182 cgctccgcgagccgaagatcctactcaccacctctcgcaatcccagcgcgcccctcactc 241

                                                                       
Query: 414 agtttgttaaggagctgaaagtggtatttccgaactcacagaggatgaaccgtggtggtc 473
           ||||||| |||||||| ||||| || || || ||||| || || ||||||||||||||||
Sbjct: 242 agtttgtcaaggagctcaaagtcgtcttccctaactcgcaaagaatgaaccgtggtggtc 301

                                                                       
Query: 474 aggtgatatcagaaatcgttgagtcctgccgatcacacgagatcactgatcttattttgg 533
           |||||||||| ||||| |||||||| ||||| || || || ||||| || ||| ||||||
Sbjct: 302 aggtgatatcggaaattgttgagtcttgccgttcgcatgatatcaccgaccttgttttgg 361

                                                                       
Query: 534 tgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcatctaccattaggtccaa 593
           ||||||| |||||||| ||||| |||||||| || || || ||||| ||||| || ||||
Sbjct: 362 tgcatgaacatcgtggccagcccgatggtttaatcgtctgccatcttccatttgggccaa 421

                                                                       
Query: 594 ctgcatactttgggttactcaatgtggtaacacggcatgatatcaaagataggaaggcca 653
           ||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 422 ctgcatattttgggttgctcaatgtggtgacacgccacgatattaaagataggaaggcca 481

                                                                       
Query: 654 tgggcaaaatgtcagaagcttaccctcatttgatactggacaacttcacaactaagactg 713
           |||| |||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||
Sbjct: 482 tgggtaaaatgtcagaagcgtacccccatttaatactagataacttcacaaccaagactg 541

                                                                       
Query: 714 gtgaaaggactgctaatataatgaagcatctttttcctgttccaaagccagactcgaagc 773
           |||||||||||||||||||  | |||||||| ||||| || ||||||||||| || || |
Sbjct: 542 gtgaaaggactgctaatattgtcaagcatctctttccagtgccaaagccagattcaaaac 601

                                                                       
Query: 774 gcctaatcacttttgccaatagagatgattatatttctttcaggcatcacatctacgaaa 833
           |  |||| ||||| || || |||||||| || || || |||||||||||| | || ||||
Sbjct: 602 ggataattactttcgctaacagagatgactacatctcattcaggcatcacgtatatgaaa 661

                                                                       
Query: 834 aacacggtggccccaaatccattgacctgaaggaggttgggccccgttttgagttgcggc 893
           |||| |||||||| |||||| ||||||||||||||||||| || || || |||||||| |
Sbjct: 662 aacatggtggcccaaaatcccttgacctgaaggaggttggccctcgattcgagttgcgac 721

                                                                       
Query: 894 tctaccagatcaaacgaggaactgtggaccaaagcgaagcgcagaacgagtttgtgctaa 953
           | || |||||||| ||||||||||| ||||||   || ||||| ||||||||||||||| 
Sbjct: 722 tatatcagatcaagcgaggaactgtcgaccaagcggaggcgcaaaacgagtttgtgctac 781

                                                   
Query: 954 ggccatacatgaatactgccaagaagcagaaatcgcttgg 993
           ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 782 ggccatacatgaacacagcgaagaagcaaaaatctcttgg 821



 Score =  155 bits (78), Expect = 5e-34
 Identities = 105/114 (92%)
 Strand = Plus / Plus

                                                                       
Query: 113 ggcgagatgctgcggcggaacacgcggctgcgtcgggagtacctctaccggaagagcctc 172
           ||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||
Sbjct: 73  ggcgagatgctgcggcggaacacgcggctccggcgggagtacctgtaccgcaagagcctc 132

                                                                 
Query: 173 gagggaaaggagcgtcagcactacgagaagaagcgccgcgtccgggaggcgctc 226
           ||||| |||||||| |||||||||||||||||||| ||| |||||| |||||||
Sbjct: 133 gaggggaaggagcggcagcactacgagaagaagcggcgcctccgggcggcgctc 186
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  256 bits (129), Expect = 2e-64
 Identities = 171/185 (92%)
 Strand = Plus / Minus

                                                                           
Query: 113     ggcgagatgctgcggcggaacacgcggctgcgtcgggagtacctctaccggaagagcctc 172
               ||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||
Sbjct: 3164129 ggcgagatgctgcggcggaacacgcggctccggcgggagtacctgtaccgcaagagcctc 3164070

                                                                           
Query: 173     gagggaaaggagcgtcagcactacgagaagaagcgccgcgtccgggaggcgctcgaggag 232
               ||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||| |||
Sbjct: 3164069 gaggggaaggagcggcagcactacgagaagaagcggcgcctccgggaggcgctcgacgag 3164010

                                                                           
Query: 233     ggcaagcctatccccaccgagcttcgcaacgaggagctcgccctccgccgggagattgac 292
               || ||||| |||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 3164009 gggaagcccatccccaccgagctccgcaacgaggagctcgccctccgccgcgagatcgac 3163950

                    
Query: 293     ctcga 297
               |||||
Sbjct: 3163949 ctcga 3163945



 Score =  125 bits (63), Expect = 4e-25
 Identities = 129/151 (85%)
 Strand = Plus / Minus

                                                                           
Query: 473     caggtgatatcagaaatcgttgagtcctgccgatcacacgagatcactgatcttattttg 532
               ||||||||||| ||||| |||||||| ||||| || || || ||||| || ||| |||||
Sbjct: 3163411 caggtgatatcggaaattgttgagtcttgccgttcgcatgatatcaccgaccttgttttg 3163352

                                                                           
Query: 533     gtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcatctaccattaggtcca 592
               |||||||| |||||||| ||||| |||||||| || || || ||||| ||||| || |||
Sbjct: 3163351 gtgcatgaacatcgtggccagcccgatggtttaatcgtctgccatcttccatttgggcca 3163292

                                              
Query: 593     actgcatactttgggttactcaatgtggtaa 623
               |||||||| |||||||| |||||||||||||
Sbjct: 3163291 actgcatattttgggttgctcaatgtggtaa 3163261



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 623     acacggcatgatatcaaagataggaaggccatgggcaaaatgtcagaagcttaccctcat 682
               ||||| || ||||| |||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 3163152 acacgccacgatattaaagataggaaggccatgggtaaaatgtcagaagcgtacccccat 3163093

                                      
Query: 683     ttgatactggacaacttcacaac 705
               || ||||| || |||||||||||
Sbjct: 3163092 ttaatactagataacttcacaac 3163070



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                           
Query: 311     gcagttccgaggagtatcatagatgacgagtacgccggcgccacgctccgcgagcccaag 370
               ||||||||||||||  |||| |||||||||||||| |||||  |||||||||||||||||
Sbjct: 3163848 gcagttccgaggagcctcatcgatgacgagtacgcgggcgcggcgctccgcgagcccaag 3163789

                                                                      
Query: 371     attctcctgaccacatcccgcaacccgagtgcacccctgactcagtttgttaagg 425
               || || || ||||| || ||||| || || || ||||| ||||||||||| ||||
Sbjct: 3163788 atcctactcaccacctctcgcaatcccagcgcgcccctcactcagtttgtcaagg 3163734



 Score = 85.7 bits (43), Expect = 4e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                           
Query: 899     cagatcaaacgaggaactgtggaccaaagcgaagcgcagaacgagtttgtgctaaggcca 958
               |||||||| ||||||||||| ||||||   || ||||| ||||||||||||||| |||||
Sbjct: 3160824 cagatcaagcgaggaactgtcgaccaagcggaggcgcaaaacgagtttgtgctacggcca 3160765

                                                  
Query: 959     tacatgaatactgccaagaagcagaaatcgcttgg 993
               |||||||| || || |||||||| ||||| |||||
Sbjct: 3160764 tacatgaacacagcgaagaagcaaaaatctcttgg 3160730



 Score = 75.8 bits (38), Expect = 4e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                           
Query: 814     caggcatcacatctacgaaaaacacggtggccccaaatccattgacctgaaggaggttgg 873
               |||||||||| | || |||||||| |||||||| |||||| |||||||||||||||||||
Sbjct: 3160998 caggcatcacgtatatgaaaaacatggtggcccaaaatcccttgacctgaaggaggttgg 3160939

                                 
Query: 874     gccccgttttgagttgcg 891
                || || || ||||||||
Sbjct: 3160938 ccctcgattcgagttgcg 3160921



 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                         
Query: 708     agactggtgaaaggactgctaatataatgaagcatctttttcctgttccaaagccaga 765
               |||||||||||||||||||||||||  | |||||||| ||||| || |||||||||||
Sbjct: 3161207 agactggtgaaaggactgctaatattgtcaagcatctctttccagtgccaaagccaga 3161150



 Score = 46.1 bits (23), Expect = 0.31
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                      
Query: 423     aggagctgaaagtggtatttccgaactcacagaggatgaaccgtggtggtcaggt 477
               ||||||| ||||| || || || ||||| || || ||||||||||||||||||||
Sbjct: 3163624 aggagctcaaagtcgtcttccctaactcgcaaagaatgaaccgtggtggtcaggt 3163570
to top
>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1177_E11
          Length = 92375

 Score =  256 bits (129), Expect = 2e-64
 Identities = 171/185 (92%)
 Strand = Plus / Minus

                                                                         
Query: 113   ggcgagatgctgcggcggaacacgcggctgcgtcgggagtacctctaccggaagagcctc 172
             ||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||
Sbjct: 20209 ggcgagatgctgcggcggaacacgcggctccggcgggagtacctgtaccgcaagagcctc 20150

                                                                         
Query: 173   gagggaaaggagcgtcagcactacgagaagaagcgccgcgtccgggaggcgctcgaggag 232
             ||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||| |||
Sbjct: 20149 gaggggaaggagcggcagcactacgagaagaagcggcgcctccgggaggcgctcgacgag 20090

                                                                         
Query: 233   ggcaagcctatccccaccgagcttcgcaacgaggagctcgccctccgccgggagattgac 292
             || ||||| |||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 20089 gggaagcccatccccaccgagctccgcaacgaggagctcgccctccgccgcgagatcgac 20030

                  
Query: 293   ctcga 297
             |||||
Sbjct: 20029 ctcga 20025



 Score =  125 bits (63), Expect = 4e-25
 Identities = 129/151 (85%)
 Strand = Plus / Minus

                                                                         
Query: 473   caggtgatatcagaaatcgttgagtcctgccgatcacacgagatcactgatcttattttg 532
             ||||||||||| ||||| |||||||| ||||| || || || ||||| || ||| |||||
Sbjct: 19491 caggtgatatcggaaattgttgagtcttgccgttcgcatgatatcaccgaccttgttttg 19432

                                                                         
Query: 533   gtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcatctaccattaggtcca 592
             |||||||| |||||||| ||||| |||||||| || || || ||||| ||||| || |||
Sbjct: 19431 gtgcatgaacatcgtggccagcccgatggtttaatcgtctgccatcttccatttgggcca 19372

                                            
Query: 593   actgcatactttgggttactcaatgtggtaa 623
             |||||||| |||||||| |||||||||||||
Sbjct: 19371 actgcatattttgggttgctcaatgtggtaa 19341



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 623   acacggcatgatatcaaagataggaaggccatgggcaaaatgtcagaagcttaccctcat 682
             ||||| || ||||| |||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 19232 acacgccacgatattaaagataggaaggccatgggtaaaatgtcagaagcgtacccccat 19173

                                    
Query: 683   ttgatactggacaacttcacaac 705
             || ||||| || |||||||||||
Sbjct: 19172 ttaatactagataacttcacaac 19150



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                         
Query: 311   gcagttccgaggagtatcatagatgacgagtacgccggcgccacgctccgcgagcccaag 370
             ||||||||||||||  |||| |||||||||||||| |||||  |||||||||||||||||
Sbjct: 19928 gcagttccgaggagcctcatcgatgacgagtacgcgggcgcggcgctccgcgagcccaag 19869

                                                                    
Query: 371   attctcctgaccacatcccgcaacccgagtgcacccctgactcagtttgttaagg 425
             || || || ||||| || ||||| || || || ||||| ||||||||||| ||||
Sbjct: 19868 atcctactcaccacctctcgcaatcccagcgcgcccctcactcagtttgtcaagg 19814



 Score = 85.7 bits (43), Expect = 4e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                         
Query: 899   cagatcaaacgaggaactgtggaccaaagcgaagcgcagaacgagtttgtgctaaggcca 958
             |||||||| ||||||||||| ||||||   || ||||| ||||||||||||||| |||||
Sbjct: 16904 cagatcaagcgaggaactgtcgaccaagcggaggcgcaaaacgagtttgtgctacggcca 16845

                                                
Query: 959   tacatgaatactgccaagaagcagaaatcgcttgg 993
             |||||||| || || |||||||| ||||| |||||
Sbjct: 16844 tacatgaacacagcgaagaagcaaaaatctcttgg 16810



 Score = 75.8 bits (38), Expect = 4e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                         
Query: 814   caggcatcacatctacgaaaaacacggtggccccaaatccattgacctgaaggaggttgg 873
             |||||||||| | || |||||||| |||||||| |||||| |||||||||||||||||||
Sbjct: 17078 caggcatcacgtatatgaaaaacatggtggcccaaaatcccttgacctgaaggaggttgg 17019

                               
Query: 874   gccccgttttgagttgcg 891
              || || || ||||||||
Sbjct: 17018 ccctcgattcgagttgcg 17001



 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                       
Query: 708   agactggtgaaaggactgctaatataatgaagcatctttttcctgttccaaagccaga 765
             |||||||||||||||||||||||||  | |||||||| ||||| || |||||||||||
Sbjct: 17287 agactggtgaaaggactgctaatattgtcaagcatctctttccagtgccaaagccaga 17230



 Score = 46.1 bits (23), Expect = 0.31
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 423   aggagctgaaagtggtatttccgaactcacagaggatgaaccgtggtggtcaggt 477
             ||||||| ||||| || || || ||||| || || ||||||||||||||||||||
Sbjct: 19704 aggagctcaaagtcgtcttccctaactcgcaaagaatgaaccgtggtggtcaggt 19650
to top
>ref|NM_105054.2| Arabidopsis thaliana IMP4 (IMP4) mRNA, complete cds
          Length = 1166

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 518 actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
           |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 509 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 568

                                                                      
Query: 578 ctaccattaggtccaactgcatactttgggttactcaatgtggtaacacggcatgatat 636
           || ||||| || ||||||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 569 ctcccatttggaccaactgcatactttggattacttaatgtggtaacaagacatgatat 627



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 881 tttgagttgcggctctaccagatcaaacgaggaactgtggaccaaa 926
           ||||||||||||||||||||| | |||  |||||||||||| ||||
Sbjct: 875 tttgagttgcggctctaccaggtgaaattaggaactgtggaacaaa 920
to top
>gb|AY114605.1| Arabidopsis thaliana putative U3 small nucleolar ribonucleoprotein
           protein (At1g63780) mRNA, complete cds
          Length = 958

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 518 actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
           |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 400 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 459

                                                                      
Query: 578 ctaccattaggtccaactgcatactttgggttactcaatgtggtaacacggcatgatat 636
           || ||||| || ||||||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 460 ctcccatttggaccaactgcatactttggattacttaatgtggtaacaagacatgatat 518



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 881 tttgagttgcggctctaccagatcaaacgaggaactgtggaccaaa 926
           ||||||||||||||||||||| | |||  |||||||||||| ||||
Sbjct: 766 tttgagttgcggctctaccaggtgaaattaggaactgtggaacaaa 811
to top
>gb|AY093002.1| Arabidopsis thaliana putative U3 small nucleolar ribonucleoprotein
           protein (At1g63780) mRNA, complete cds
          Length = 1116

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 518 actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
           |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 484 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 543

                                                                      
Query: 578 ctaccattaggtccaactgcatactttgggttactcaatgtggtaacacggcatgatat 636
           || ||||| || ||||||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 544 ctcccatttggaccaactgcatactttggattacttaatgtggtaacaagacatgatat 602



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 881 tttgagttgcggctctaccagatcaaacgaggaactgtggaccaaa 926
           ||||||||||||||||||||| | |||  |||||||||||| ||||
Sbjct: 850 tttgagttgcggctctaccaggtgaaattaggaactgtggaacaaa 895
to top
>gb|AY088147.1| Arabidopsis thaliana clone 418 mRNA, complete sequence
          Length = 1146

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 518 actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
           |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 510 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 569

                                                                      
Query: 578 ctaccattaggtccaactgcatactttgggttactcaatgtggtaacacggcatgatat 636
           || ||||| || ||||||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 570 ctcccatttggaccaactgcatactttggattacttaatgtggtaacaagacatgatat 628



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 881 tttgagttgcggctctaccagatcaaacgaggaactgtggaccaaa 926
           ||||||||||||||||||||| | |||  |||||||||||| ||||
Sbjct: 876 tttgagttgcggctctaccaggtgaaattaggaactgtggaacaaa 921
to top
>emb|BX816220.1|CNS0ADVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH35ZA07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1079

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 518 actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
           |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 485 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 544

                                                                      
Query: 578 ctaccattaggtccaactgcatactttgggttactcaatgtggtaacacggcatgatat 636
           || ||||| || ||||||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 545 ctcccatttggaccaactgcatactttggattacttaatgtggtaacaagacatgatat 603



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 881 tttgagttgcggctctaccagatcaaacgaggaactgtggaccaaa 926
           ||||||||||||||||||||| | |||  |||||||||||| ||||
Sbjct: 851 tttgagttgcggctctaccaggtgaaattaggaactgtggaacaaa 896
to top
>emb|BX816669.1|CNS0AD2Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZF12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1081

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 518 actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
           |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 482 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 541

                                                                      
Query: 578 ctaccattaggtccaactgcatactttgggttactcaatgtggtaacacggcatgatat 636
           || ||||| || ||||||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 542 ctcccatttggaccaactgcatactttggattacttaatgtggtaacaagacatgatat 600



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 881 tttgagttgcggctctaccagatcaaacgaggaactgtggaccaaa 926
           ||||||||||||||||||||| | |||  |||||||||||| ||||
Sbjct: 851 tttgagttgcggctctaccaggtgaaattaggaactgtggaacaaa 896
to top
>gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12P18 genomic sequence, complete
             sequence
          Length = 79469

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                         
Query: 518   actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
             |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 74621 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 74680

                                                           
Query: 578   ctaccattaggtccaactgcatactttgggttactcaatgtggtaa 623
             || ||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 74681 ctcccatttggaccaactgcatactttggattacttaatgtggtaa 74726



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 881   tttgagttgcggctctaccag 901
             |||||||||||||||||||||
Sbjct: 75427 tttgagttgcggctctaccag 75447
to top
>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence,
            complete sequence
          Length = 87575

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                        
Query: 518  actgatcttattttggtgcatgagcatcgtggtcagcctgatggtttgattgtgtgtcat 577
            |||||| |||| ||||| |||||||| ||||||  |||||||||| | ||| | | ||||
Sbjct: 2689 actgatgttatattggttcatgagcaccgtggtgtgcctgatggtctcattatctctcat 2748

                                                          
Query: 578  ctaccattaggtccaactgcatactttgggttactcaatgtggtaa 623
            || ||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 2749 ctcccatttggaccaactgcatactttggattacttaatgtggtaa 2794



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 881  tttgagttgcggctctaccag 901
            |||||||||||||||||||||
Sbjct: 3495 tttgagttgcggctctaccag 3515
to top
>ref|NM_001057982.1| Oryza sativa (japonica cultivar-group) Os03g0779500 (Os03g0779500)
           mRNA, complete cds
          Length = 853

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 229 ggagggcaagcctatccccaccgagcttcgcaac 262
           |||||||||||| |||||||||||||| ||||||
Sbjct: 103 ggagggcaagcccatccccaccgagctccgcaac 70
to top
>dbj|AK220798.1| Arabidopsis thaliana mRNA for putative U3 small nucleolar
           ribonucleoprotein, complete cds, clone: RAFL22-29-E08
          Length = 552

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 881 tttgagttgcggctctaccagatcaaacgaggaactgtggaccaaa 926
           ||||||||||||||||||||| | |||  |||||||||||| ||||
Sbjct: 236 tttgagttgcggctctaccaggtgaaattaggaactgtggaacaaa 281
to top
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
              sequence
          Length = 144306

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 229    ggagggcaagcctatccccaccgagcttcgcaac 262
              |||||||||||| |||||||||||||| ||||||
Sbjct: 123106 ggagggcaagcccatccccaccgagctccgcaac 123073
to top
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
             sequence
          Length = 178158

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 229   ggagggcaagcctatccccaccgagcttcgcaac 262
             |||||||||||| |||||||||||||| ||||||
Sbjct: 32279 ggagggcaagcccatccccaccgagctccgcaac 32246
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 229      ggagggcaagcctatccccaccgagcttcgcaac 262
                |||||||||||| |||||||||||||| ||||||
Sbjct: 32121666 ggagggcaagcccatccccaccgagctccgcaac 32121633
to top
>dbj|AK108685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C03, full
           insert sequence
          Length = 885

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 229 ggagggcaagcctatccccaccgagcttcgcaac 262
           |||||||||||| |||||||||||||| ||||||
Sbjct: 135 ggagggcaagcccatccccaccgagctccgcaac 102
to top
>gb|AC113030.5| Mus musculus chromosome 6, clone RP23-211L5, complete sequence
          Length = 187655

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 727    taatataatgaagcatctttttc 749
              |||||||||||||||||||||||
Sbjct: 161217 taatataatgaagcatctttttc 161239
to top
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
          Length = 3225748

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 213    tccgggaggcgctcgaggaggg 234
              ||||||||||||||||||||||
Sbjct: 583097 tccgggaggcgctcgaggaggg 583076



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 213     tccgggaggcgctcgaggagg 233
               |||||||||||||||||||||
Sbjct: 1715072 tccgggaggcgctcgaggagg 1715052
to top
>gb|CP000377.1| Silicibacter sp. TM1040, complete genome
          Length = 3200938

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 743     ctttttcctgttccaaagccag 764
               ||||||||||||||||||||||
Sbjct: 2426750 ctttttcctgttccaaagccag 2426729
to top
>ref|NM_070003.3| Caenorhabditis elegans ZK795.3 (ZK795.3) mRNA, complete cds
          Length = 991

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 567 ttgtgtgtcatctaccattaggtccaactgcatacttt 604
           |||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 435 ttgtttgtcatcttccattcggtccaactgcattcttt 472
to top
>emb|Z83246.1|CEZK795 Caenorhabditis elegans Cosmid ZK795, complete sequence
          Length = 16033

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 567   ttgtgtgtcatctaccattaggtccaactgcatacttt 604
             |||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 14896 ttgtttgtcatcttccattcggtccaactgcattcttt 14933
to top
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 1253    atgcattgccaaaatgttgaaattt 1277
               |||| ||||||||||||||||||||
Sbjct: 6948317 atgcgttgccaaaatgttgaaattt 6948341
to top
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome
          Length = 7804765

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 207     gccgcgtccgggaggcgctcgaggagggc 235
               ||||||||||||| |||||||| ||||||
Sbjct: 4519887 gccgcgtccgggatgcgctcgacgagggc 4519915
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 402     cacccctgactcagtttgtta 422
               |||||||||||||||||||||
Sbjct: 6289574 cacccctgactcagtttgtta 6289594
to top
>gb|AY811634.1| Schistosoma japonicum SJCHGC08273 protein mRNA, partial cds
          Length = 567

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 573 gtcatctaccattaggtccaactgc 597
           ||||||||||||| |||||||||||
Sbjct: 457 gtcatctaccatttggtccaactgc 481
to top
>ref|XM_860563.1| PREDICTED: Canis familiaris hypothetical protein LOC609955
           (LOC609955), mRNA
          Length = 633

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 210 gcgtccgggaggcgctcgagg 230
           |||||||||||||||||||||
Sbjct: 184 gcgtccgggaggcgctcgagg 204
to top
>gb|AC093549.1| Drosophila melanogaster 3L BAC RP98-14L10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 180633

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1253   atgcattgccaaaatgttgaaattt 1277
              |||| ||||||||||||||||||||
Sbjct: 156398 atgcgttgccaaaatgttgaaattt 156422
to top
>gb|AC004353.1|AC004353 Drosophila melanogaster DNA sequence (P1 DS03551 (D256)), complete
             sequence
          Length = 47736

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1253  atgcattgccaaaatgttgaaattt 1277
             |||| ||||||||||||||||||||
Sbjct: 46328 atgcgttgccaaaatgttgaaattt 46352


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 212,792,299
Number of extensions: 10510971
Number of successful extensions: 190257
Number of sequences better than 10.0: 33
Number of HSP's gapped: 190255
Number of HSP's successfully gapped: 60
Length of query: 1294
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1271
Effective length of database: 18,503,978,556
Effective search space: 23518556744676
Effective search space used: 23518556744676
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top