Clone Name | rbah63n10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC120141.9| Mus musculus chromosome 5, clone RP24-285N11, complete sequence Length = 134166 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tacacatatatgcatctttca 86 ||||||||||||||||||||| Sbjct: 124753 tacacatatatgcatctttca 124733
>gb|AC121981.3| Mus musculus BAC clone RP24-290K9 from 5, complete sequence Length = 184908 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tacacatatatgcatctttca 86 ||||||||||||||||||||| Sbjct: 166999 tacacatatatgcatctttca 167019
>emb|AL359741.9| Human DNA sequence from clone RP11-161P17 on chromosome 13 Contains a novel pseudogene, complete sequence Length = 139877 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 aagtacagcagaaacacaaca 361 ||||||||||||||||||||| Sbjct: 70217 aagtacagcagaaacacaaca 70237
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ccaaacaccaccatttttctg 248 ||||||||||||||||||||| Sbjct: 1103557 ccaaacaccaccatttttctg 1103537
>gb|AC124097.6| Mus musculus chromosome 15, clone RP23-431H12, complete sequence Length = 203639 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cacacaagtacagcagaaacacaa 359 |||||| ||||||||||||||||| Sbjct: 82164 cacacatgtacagcagaaacacaa 82141
>gb|AC152952.1| Mus musculus 6 BAC RP23-86B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187484 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 tacagcagaaacacaacaca 363 |||||||||||||||||||| Sbjct: 40323 tacagcagaaacacaacaca 40342
>emb|AL356753.16| Human DNA sequence from clone RP11-481G8 on chromosome 10 Contains the 5'end of a novel gene containing FLJ40930, gene FLJ35875, the RAI17 gene for retinoic acid induced 17, a novel gene and two CpG islands, complete sequence Length = 183460 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 agaagccttgggcccagcagcagc 181 |||||||||||| ||||||||||| Sbjct: 157638 agaagccttgggtccagcagcagc 157615
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cacacaagtacagcagaaacacaa 359 |||||||||| ||||||||||||| Sbjct: 6655862 cacacaagtagagcagaaacacaa 6655839
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cacacaagtacagcagaaacacaa 359 |||||||||| ||||||||||||| Sbjct: 90237 cacacaagtagagcagaaacacaa 90214
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tcaataaaagaaacatcggc 121 |||||||||||||||||||| Sbjct: 1431716 tcaataaaagaaacatcggc 1431735
>gb|AC174083.2| Mus musculus BAC clone RP23-25B17 from chromosome 15, complete sequence Length = 211435 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cacacaagtacagcagaaacacaa 359 |||||| ||||||||||||||||| Sbjct: 177383 cacacatgtacagcagaaacacaa 177360 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,633,072 Number of Sequences: 3902068 Number of extensions: 4633072 Number of successful extensions: 82812 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82722 Number of HSP's gapped (non-prelim): 90 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)