Clone Name | rbastl38f04 |
---|---|
Clone Library Name | barley_pub |
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 30.8 bits (68), Expect = 0.84 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Frame = +3 Query: 66 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------C 221 F++ QD H + S + C Q V+ N CIP+ S +T N++ P L C Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVC 339 Query: 222 HFFTGQQPCDHI 257 H G++ D + Sbjct: 340 HLLEGEKTIDSV 351
>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42| Length = 723 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = +3 Query: 87 SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 266 S +T+++ +D + IP N SH + H F PC+H C Sbjct: 114 SSKTALRTGSSDTQVDEVKSIPAN----SHLVNHLNCPMCSRLRLHSF--MLPCNHSLCE 167 Query: 267 KCFCQL*R---LVKSFSFVLC 320 KC QL + + ++F ++C Sbjct: 168 KCLRQLQKHAEVTENFFILIC 188
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.9 bits (63), Expect = 3.2 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 320 AKHEAEGL--DEPLQLTEAFGASYVVARLLSSEEMTQEWKKEASGCILWCMRTLNVILWD 147 A +E GL +E Q T F + L + EMT W I+WC +T N I WD Sbjct: 374 ANNENVGLWSEERKQNTRKF-----IEAQLDAFEMTGGW-------IMWCYKTENSIEWD 421 Query: 146 A*NVVQ 129 ++Q Sbjct: 422 VEKLIQ 427
>MRP_STRSU (P32653) Muramidase-released protein precursor (136 kDa surface| protein) Length = 1256 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 154 KITFRVLIHHKMQPEAS--FFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSAS 312 + T VL + ++P S F H +++ +SN+ TYD AS N G+ SA+ Sbjct: 292 RTTGDVLEKYTIEPGESVTFSHPTKVNANNSNITVTYDTSLASANTPGALKFSAN 346
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 239 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 129 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +3 Query: 45 PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSHTPQ 185 P S+A +QDHS ++S + P+ ++ S P NI SS T Q Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826
>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) Length = 534 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 13/61 (21%) Frame = +3 Query: 75 IQDHSKRT--SIQMNCPQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPF 215 I++H K+ ++ P+ VL + +P + + +H T NATR FLLPF Sbjct: 75 IKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPF 134 Query: 216 L 218 L Sbjct: 135 L 135
>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42| Length = 723 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Frame = +3 Query: 87 SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 266 S +T++++ +D +P SSH + T H F PC+H C Sbjct: 114 SSKTALRVGSSDTQMDEPKTMPA----SSHLVSHLTCPMCNRLRLHSF--MLPCNHSLCE 167 Query: 267 KCFCQL*R---LVKSFSFVLC 320 KC QL + + ++F ++C Sbjct: 168 KCLRQLQKHAEVTENFFILIC 188
>ZN272_HUMAN (Q14592) Zinc finger protein 272 (Zinc finger protein 460) (Zinc| finger protein HZF8) Length = 562 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 Query: 231 TGQQPCDHIRCSKCFCQL*RLVKSFS 308 TG++P I+C K FC+ L++ FS Sbjct: 443 TGEKPYVCIQCGKAFCRTTNLIRHFS 468
>SMOX1_SCHMA (Q26600) Homeobox protein SMOX-1 (Fragment)| Length = 280 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 74 HPRSQQKNIHPNELSTTSPGQHFMHPT 154 +P S Q +PN L G +FMHPT Sbjct: 24 YPTSNQLKSYPNGLLNPFNGTNFMHPT 50
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +1 Query: 172 LIHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 270 L HH+M P + FH +SS S+ ATT +P+ Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245
>PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) (Transplantation antigen P91A) (Tum-P91A antigen) Length = 530 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 11/45 (24%) Frame = +3 Query: 117 PQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPFL 218 P+ VL + +P + + +H T NATR FLLPFL Sbjct: 87 PRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFL 131
>OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1| Length = 310 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 193 VAFCGV*EL*MLFCGMHEMLSRTSCGQFIWMDVLLL 86 ++FCG E+ +FC + +L T CG+ +VL++ Sbjct: 166 LSFCGTSEIDFIFCDLPPLLKLT-CGESYTQEVLII 200
>Y1217_CAMJE (Q9PN78) UPF0124 protein Cj1217c| Length = 226 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +3 Query: 144 CIPQNNIQSSHTPQNATRSFLLPFLC 221 C+ Q +Q+SH +N F+LP +C Sbjct: 123 CVDQITMQNSHLDKNKFHLFILPGIC 148
>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 417 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = -2 Query: 272 AFGASYVVARLLSSEEMTQEWKKE 201 A+GA +VA+LL + E+T++W K+ Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322
>IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)| (IkappaBalpha) (IKB-alpha) (RL/IF-1) Length = 314 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +3 Query: 96 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 242 T IQ QL L+N+ +P++ + S+ ++ LP+ F GQ+ Sbjct: 263 TRIQQQLGQLTLENLQTLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311
>IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)| (IkappaBalpha) (IKB-alpha) Length = 314 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +3 Query: 96 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 242 T IQ QL L+N+ +P++ + S+ ++ LP+ F GQ+ Sbjct: 263 TRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311
>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)| Length = 390 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +1 Query: 142 HASHKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAP 267 H H + R I H +SF H+ + DSN +++ D P Sbjct: 163 HHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQP 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,823,197 Number of Sequences: 219361 Number of extensions: 1127403 Number of successful extensions: 3265 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3048 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3265 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)