ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KR122_HUMAN (P59991) Keratin-associated protein 12-2 (Keratin-as... 32 0.39
2KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-a... 31 0.87
3KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (U... 30 1.5
4KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-as... 30 1.5
5KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-as... 30 1.5
6GOGA2_RAT (Q62839) Golgin subfamily A member 2 (Cis-Golgi matrix... 29 2.5
7KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-a... 29 2.5
8KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-as... 29 2.5
9NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein ... 29 2.5
10KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-as... 29 2.5
11KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-as... 28 4.3
12KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-as... 28 4.3
13ELM1_YEAST (P32801) Serine/threonine-protein kinase ELM1 (EC 2.7... 28 5.7
14NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protei... 28 5.7
15NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protei... 27 9.7
16MTMR5_HUMAN (O95248) SET-binding factor 1 (Sbf1) (Myotubularin-r... 27 9.7
17KR121_HUMAN (P59990) Keratin-associated protein 12-1 (Keratin-as... 27 9.7
18KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-as... 27 9.7
19KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-as... 27 9.7
20CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic lin... 27 9.7

>KR122_HUMAN (P59991) Keratin-associated protein 12-2 (Keratin-associated|
           protein 12.2) (High sulfur keratin-associated protein
           12.2)
          Length = 146

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = -3

Query: 277 CGVGCYSACSLQCCA---CLRFVCVSIDLDRFSCSVLVVCR-SVATPCGFRPS 131
           C   C S C   CCA   C    CV     + SC V V C+ SV  P  F+P+
Sbjct: 2   CHTSCSSGCQPACCAPSPCQPACCVPSSC-QASCCVPVGCQSSVCVPVSFKPA 53



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>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated|
           protein 10.11) (High sulfur keratin-associated protein
           10.11) (Keratin-associated protein 18-11)
           (Keratin-associated protein 18.11)
          Length = 298

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -3

Query: 280 ACGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           AC  GC S+C+  CC   +C    C S    + +C V V C++V
Sbjct: 66  ACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQ-ACCVPVCCKTV 108



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>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)|
          Length = 182

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
 Frame = -3

Query: 310 GSRHSFTTILACGVGCYSACSLQCCACL---------RFVCVSIDLDRFSCSVLVVCR 164
           GS+    +   CG GC S+C +  C C+         +  C S    + SC V V C+
Sbjct: 122 GSKGGCGSCGGCGSGCGSSCCVPVCCCVPACSCSSCGKGGCGSCGCSQSSCCVPVCCQ 179



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>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated|
           protein 10.2) (High sulfur keratin-associated protein
           10.2) (Keratin-associated protein 18-2)
           (Keratin-associated protein 18.2)
          Length = 255

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -3

Query: 280 ACGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           AC  GC S+C+  CC   +C    C S    + +C V V C+ V
Sbjct: 66  ACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQ-ACCVPVCCKPV 108



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>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C++V
Sbjct: 196 CQSGCISSCTPSCCQQSSCQPACCTSSSCQQ-ACCVPVCCKTV 237



 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C++V
Sbjct: 77  CQSGCTSSCTPSCCQQSSCQLACCASSPCQQ-ACCVPVCCKTV 118



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>GOGA2_RAT (Q62839) Golgin subfamily A member 2 (Cis-Golgi matrix protein|
           GM130)
          Length = 986

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +3

Query: 177 NTEQENRSRSIETHTNRRHAQHWSEQA 257
           N EQE R   +E     R AQHWSEQA
Sbjct: 485 NREQEGRMLELE-----REAQHWSEQA 506



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>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated|
           protein 10.12) (High sulfur keratin-associated protein
           10.12) (Keratin-associated protein 18-12)
           (Keratin-associated protein 18.12)
          Length = 245

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C++V
Sbjct: 72  CQSGCTSSCTPSCCQQSSCQPACCTSSPCQQ-ACCVPVCCKTV 113



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>KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-associated|
           protein 10.7) (High sulfur keratin-associated protein
           10.7) (Keratin-associated protein 18-7)
           (Keratin-associated protein 18.7)
          Length = 370

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C++V
Sbjct: 77  CQSGCTSSCTPSCCQQSSCQLACCASSPCQQ-ACCVPVCCKTV 118



 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C+ V
Sbjct: 196 CQSGCISSCTPSCCQQSSCKPACCTSSPCQQ-ACCVPVCCKPV 237



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>NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34 me
          Length = 695

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 322 PLWLGSRHSFTTILACGVGCYSACSLQCCACLRFVC 215
           PLW+ S   +  I++    C+     +CC C R  C
Sbjct: 594 PLWMHSLKPWDNIISLATSCFQR---RCCCCCRVCC 626



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>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated|
           protein 10.6) (High sulfur keratin-associated protein
           10.6) (Keratin-associated protein 18-6)
           (Keratin-associated protein 18.6)
          Length = 365

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C++V
Sbjct: 77  CQSGCTSSCTPSCCQQSSCQLACCASSPCQQ-ACCVPVCCKTV 118



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>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated|
           protein 10.3) (High sulfur keratin-associated protein
           10.3) (Keratin-associated protein 18-3)
           (Keratin-associated protein 18.3)
          Length = 221

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C+ V
Sbjct: 67  CQSGCTSSCTPSCCQQSSCQPACCTSSPCQQ-ACCVPVCCKPV 108



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>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated|
           protein 10.9) (High sulfur keratin-associated protein
           10.9) (Keratin-associated protein 18-9)
           (Keratin-associated protein 18.9)
          Length = 292

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C V V C+ V
Sbjct: 67  CQSGCTSSCTPSCCQQSSCQPAYCTSSPCQQ-ACCVPVCCKPV 108



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>ELM1_YEAST (P32801) Serine/threonine-protein kinase ELM1 (EC 2.7.11.1)|
          Length = 640

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
 Frame = +3

Query: 72  DLFASTVLNSTC*LINYSTSLGRKPHGVATLLHT--------TNTEQENRSRSIETHTNR 227
           + F++TVL S+    +Y +SLG +   V   L T         N    N  ++ +  T+R
Sbjct: 479 ECFSTTVLRSSPDSSDYCSSLGEEAIQVTDFLDTFCRSNESLPNLTVNNDKQNSDMKTDR 538

Query: 228 RHAQHWSEQAL*HPTPHASMVVKLWREPSQSGH 326
             +   S  +L  PTP  +M ++L   P ++G+
Sbjct: 539 SESS--SHSSLKIPTPIKAM-IRLKSSPKENGN 568



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>NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 697

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 322 PLWLGSRHSFTTILACGVGCYSACSLQCCACLRFVC 215
           PLW+ S   +  +++    C+     +CC C R  C
Sbjct: 594 PLWMHSLKPWDNVISLATTCFQR---RCCCCCRVCC 626



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>NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 690

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 322 PLWLGSRHSFTTILACGVGCYSACSLQCCACLRFVC 215
           PLW+ S   +  +++   GC+      CC C R  C
Sbjct: 594 PLWMRSLKPWDAVVSKFTGCFQMR---CCCCCRVCC 626



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>MTMR5_HUMAN (O95248) SET-binding factor 1 (Sbf1) (Myotubularin-related protein|
           5)
          Length = 1866

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 195 RSRSIETHTNR--RHAQHWSEQAL*HPTPHASMVVKLWREPSQSGH 326
           R R+ E H  R  RH Q  +EQ   +  P+ ++ +   + P +S H
Sbjct: 452 RMRADENHPQRVLRHVQELAEQLYKNENPYPAVAMHKVQRPGESSH 497



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>KR121_HUMAN (P59990) Keratin-associated protein 12-1 (Keratin-associated|
           protein 12.1) (High sulfur keratin-associated protein
           12.1)
          Length = 96

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 13/61 (21%)
 Frame = -3

Query: 277 CGVGCYSACSLQCCA-------------CLRFVCVSIDLDRFSCSVLVVCRSVATPCGFR 137
           C   C S C   CCA             C   VCV +      C  +    SV  P   R
Sbjct: 2   CHTSCSSGCQPACCAPSPCQASCYIPVGCQSSVCVPVSFKPAVCVPVRCQSSVCVPVSCR 61

Query: 136 P 134
           P
Sbjct: 62  P 62



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>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRS 161
           C  GC  +C+  CC   +C    C S    + +C V V C+S
Sbjct: 86  CQSGCTDSCTPSCCQQSSCQPACCTSSPCQQ-ACCVPVCCKS 126



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>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated|
           protein 10.1) (High sulfur keratin-associated protein
           10.1) (Keratin-associated protein 18-1)
           (Keratin-associated protein 18.1)
          Length = 282

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -3

Query: 277 CGVGCYSACSLQCC---ACLRFVCVSIDLDRFSCSVLVVCRSV 158
           C  GC S+C+  CC   +C    C S    + +C + V C+ V
Sbjct: 67  CQSGCTSSCTPSCCQQSSCQPACCTSSPCQQ-ACCMPVCCKPV 108



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>CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic linker-associated|
            protein 1) (Multiple asters homolog 1)
          Length = 1538

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 191  KSVEVDRDAHKSQARTALERASTVA 265
            K++E  +D+HK   R A E AST+A
Sbjct: 1391 KTLEAHKDSHKEVVRAAEEAASTLA 1415


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,423,707
Number of Sequences: 219361
Number of extensions: 942315
Number of successful extensions: 2432
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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