ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PA2H_AGKPI (P04361) Phospholipase A2 homolog (APP-K-49) 31 1.4
2PA2M_AGKCL (P49121) Phospholipase A2 homolog precursor (Myotoxin) 30 2.3
3PA22_BOTAS (P24605) Phospholipase A2 homolog 2 (Myotoxin II) 30 2.3
4PA23_BOTAS (Q9PVE3) Phospholipase A2 homolog 3 precursor (Myotox... 30 2.3
5THT1_SCHPO (Q09684) Nuclear fusion protein tht1 29 3.9
6PA2H_CROAT (Q8UVZ7) Phospholipase A2 homolog Cax-K49 precursor 29 3.9
7PA27_TRIGA (P70089) Phospholipase A2 isozyme 7 precursor (EC 3.1... 29 3.9
8PA21B_BOTJR (P45881) Phospholipase A2 precursor (EC 3.1.1.4) (Ph... 29 3.9
9PA2H_BOTNE (Q9IAT9) Phospholipase A2 homolog (Fragment) 28 6.7
10PA22_CERGO (P81165) Phospholipase A2 homolog, myotoxin II (GODMT... 28 6.7
11PA2H_BOTJR (Q90249) Phospholipase A2 homolog 1 (Bothropstoxin I)... 28 8.8
12PA22_BOTPI (P82287) Phospholipase A2 homolog 2 (Piratoxin-II) (P... 28 8.8
13PA21B_BOTAS (P20474) Phospholipase A2 (EC 3.1.1.4) (Myotoxin I) ... 28 8.8

>PA2H_AGKPI (P04361) Phospholipase A2 homolog (APP-K-49)|
          Length = 121

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 195 KNKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           KN  L  +C+C K  A+  ++N+  + K+  ++  + CKK
Sbjct: 78  KNPCLKEMCECDKAVAICLRENLDTYNKKYKAYFKLKCKK 117



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>PA2M_AGKCL (P49121) Phospholipase A2 homolog precursor (Myotoxin)|
          Length = 137

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 195 KNKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           KN  L  +C+C K  A+  ++N+  + K+  ++    CKK
Sbjct: 94  KNPCLKEMCECDKAVAICLRENLDTYNKKYKAYFKFKCKK 133



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>PA22_BOTAS (P24605) Phospholipase A2 homolog 2 (Myotoxin II)|
          Length = 121

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 198 NKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           N  L  LC+C K  A+  ++N+  + K+   +   +CKK
Sbjct: 79  NSCLKELCECDKAVAICLRENLNTYNKKYRYYLKPLCKK 117



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>PA23_BOTAS (Q9PVE3) Phospholipase A2 homolog 3 precursor (Myotoxin III)|
           (M1-3-3)
          Length = 138

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 198 NKTLLSLCDCSKLYAVRSQKNIAIFCKE-ANSFASVICKK 314
           N  L  LC+C K  A+  +KN+  + K+  N++    CKK
Sbjct: 95  NSCLKELCECDKAVAICLRKNLDTYNKKYKNNYLKPFCKK 134



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>THT1_SCHPO (Q09684) Nuclear fusion protein tht1|
          Length = 577

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -3

Query: 192 RIHASLYLVLCCKEVDRIVNGTR*HHALGCDCVKLISGKSYW--SFVLHRHTTIRIC 28
           RIH+++ + LC  E  +I+  +        +CV  +   S W  SF  H H    +C
Sbjct: 89  RIHSAIQMTLCDFERSQILAPSECVRGSQSECVSKLESTSTWWLSFTSHFHDVNHLC 145



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>PA2H_CROAT (Q8UVZ7) Phospholipase A2 homolog Cax-K49 precursor|
          Length = 137

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 198 NKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           N  L  +C+C K  A+  ++N+  + K+   +   +CKK
Sbjct: 95  NPCLKEMCECDKAVAICLRENLDTYNKKYKIYPKFLCKK 133



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>PA27_TRIGA (P70089) Phospholipase A2 isozyme 7 precursor (EC 3.1.1.4)|
           (Phospholipase A2 isozyme VII) (Phosphatidylcholine
           2-acylhydrolase) (PLA2-VII)
          Length = 138

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 195 KNKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           KN  L  LC+C K  A+  ++N+  + K+      + CKK
Sbjct: 94  KNPHLKELCECDKAVAICFRENMDTYDKKKKINLKLFCKK 133



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>PA21B_BOTJR (P45881) Phospholipase A2 precursor (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase) (BJUPLA2)
          Length = 138

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 216 LCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           +C+C K  AV  ++N+  + K   ++  V+CKK
Sbjct: 101 ICECDKAAAVCFRENLRTYKKRYMAYPDVLCKK 133



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>PA2H_BOTNE (Q9IAT9) Phospholipase A2 homolog (Fragment)|
          Length = 119

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 198 NKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           N  L  LC+C K  A+  ++N+  + K+        CKK
Sbjct: 77  NPCLXELCECDKAVAICLRENLGTYNKKYRYHLKPFCKK 115



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>PA22_CERGO (P81165) Phospholipase A2 homolog, myotoxin II (GODMT-II)|
          Length = 121

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 198 NKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           N  L  +C+C K  A+  ++N+  + K    +   +CKK
Sbjct: 79  NPCLQEMCECDKAVAICLRENLDTYNKNYKIYPKPLCKK 117



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>PA2H_BOTJR (Q90249) Phospholipase A2 homolog 1 (Bothropstoxin I) (BthTX-I)|
           (BtxtxI)
          Length = 121

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 198 NKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           N  L  LC+C K  A+  ++N+  + K+        CKK
Sbjct: 79  NPCLKELCECDKAVAICLRENLGTYNKKYRYHLKPFCKK 117



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>PA22_BOTPI (P82287) Phospholipase A2 homolog 2 (Piratoxin-II) (PrTX-II)|
          Length = 121

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 198 NKTLLSLCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           N  L  LC+C K  A+  ++N+  + K+        CKK
Sbjct: 79  NPCLKELCECDKAVAICLRENLGTYNKKYRYHLKPFCKK 117



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>PA21B_BOTAS (P20474) Phospholipase A2 (EC 3.1.1.4) (Myotoxin I)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 122

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 216 LCDCSKLYAVRSQKNIAIFCKEANSFASVICKK 314
           +C+C K  AV  ++N+  + K   ++  ++CKK
Sbjct: 85  ICECDKAAAVCFRENLRTYKKRYMAYPDLLCKK 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,382,160
Number of Sequences: 219361
Number of extensions: 1119004
Number of successful extensions: 2292
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2292
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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