Clone Name | rbart40e04 |
---|---|
Clone Library Name | barley_pub |
>MTNN_BACSU (O32028) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 32.7 bits (73), Expect = 0.63 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -1 Query: 479 DMEGAAVAYVADLFSTPAIFVKAVTDIVDGEKPTAEEFLQNLISVTMALDQAVLQVV 309 +ME AAVA V F TP + ++A++DI E + F Q L + + VL+V+ Sbjct: 173 EMEAAAVAQVCHQFKTPFVVIRALSDIAGKESHVS--FDQFLEQAAVHSTELVLKVI 227
>MTNN_HAEIN (P45113) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 229 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = -1 Query: 479 DMEGAAVAYVADLFSTPAIFVKAVTDIVDGEKPTA-EEFLQNLISVTMALDQAVLQVVD 306 +ME A+A V F+ P + V+A++D DG+ + EEFL + AL VL ++D Sbjct: 172 EMEATAIAQVCYAFNVPFVVVRAISDGGDGKASMSFEEFLPLAAKQSSAL---VLGMID 227
>APEB_MYCTU (O06634) Probable M18-family aminopeptidase 2 (EC 3.4.11.-)| Length = 433 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 151 RGSRECKTWVESPGKHYTSNNIYSGSLDLWNPEQ 252 R RE W + PG+++T + +GSL WN EQ Sbjct: 35 RELREADRWPDKPGRYFT---VRAGSLVAWNAEQ 65
>APEB_MYCBO (P59951) Probable M18-family aminopeptidase 2 (EC 3.4.11.-)| Length = 433 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 151 RGSRECKTWVESPGKHYTSNNIYSGSLDLWNPEQ 252 R RE W + PG+++T + +GSL WN EQ Sbjct: 35 RELREADRWPDKPGRYFT---VRAGSLVAWNAEQ 65
>HM21_CAEEL (Q22811) Homeobox protein ceh-21| Length = 495 Score = 30.4 bits (67), Expect = 3.1 Identities = 21/67 (31%), Positives = 30/67 (44%) Frame = +3 Query: 216 IFRLPRFVEPRTA*RKVGRSEIRDTFATDEVYHLQDCLVKRHRHRDQVLQKLLGCWLLPI 395 + R+ EP A RK IR TF ++ LQ + HR ++ QKL L Sbjct: 373 VARITGLDEPTPAKRKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDF 432 Query: 396 NNVGHSF 416 + VG+ F Sbjct: 433 STVGNFF 439
>SPL14_ARATH (Q8RY95) Squamosa promoter-binding-like protein 14 (SPL1-related| protein 2) Length = 1035 Score = 29.3 bits (64), Expect = 7.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 115 RMARSNRQEFFTRGSRECKTWVESPGKHYTSNNIYSGSLDL 237 R+A NR+ T E + V PG H T+NN + ++DL Sbjct: 183 RLAGHNRRRRKTTQPEEVASGVVVPGNHDTTNNTANANMDL 223
>GATA_BRUSU (Q8FW67) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 493 Score = 29.3 bits (64), Expect = 7.0 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = -1 Query: 521 HDESAILSNEATVKDMEGAAVAY------VADLFSTPAIFVKAVTDIVDGEKPTAEEFLQ 360 HD++ ++ + + +G A A V DLF+T + +A + I+DG KP E Sbjct: 49 HDQARSMAKASDERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYE---- 104 Query: 359 NLISVTMALDQAVL 318 + ++ + D AV+ Sbjct: 105 STVTANLWADGAVM 118
>GATA_BRUME (Q8YC57) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 493 Score = 29.3 bits (64), Expect = 7.0 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = -1 Query: 521 HDESAILSNEATVKDMEGAAVAY------VADLFSTPAIFVKAVTDIVDGEKPTAEEFLQ 360 HD++ ++ + + +G A A V DLF+T + +A + I+DG KP E Sbjct: 49 HDQARSMAKASDERIAKGEAGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYE---- 104 Query: 359 NLISVTMALDQAVL 318 + ++ + D AV+ Sbjct: 105 STVTANLWADGAVM 118
>SPTB2_HUMAN (Q01082) Spectrin beta chain, brain 1 (Spectrin, non-erythroid beta| chain 1) (Beta-II spectrin) (Fodrin beta chain) Length = 2364 Score = 29.3 bits (64), Expect = 7.0 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 15/68 (22%) Frame = +1 Query: 58 LIEPSLTKLHSL*NC------TKSHRMARSNRQEFFTRGSRECKTWV---------ESPG 192 +++ LT LH + TK+ R+ +N+ E FT+ + W+ + G Sbjct: 1350 VVKEKLTGLHKMWEVLESTTQTKAQRLFDANKAELFTQSCADLDKWLHGLESQIQSDDYG 1409 Query: 193 KHYTSNNI 216 KH TS NI Sbjct: 1410 KHLTSVNI 1417
>FAS_CHICK (P12276) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 28.9 bits (63), Expect = 9.1 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Frame = +1 Query: 148 TRGSRECKTWVESPGKHYTSNN-------IYSGSLDLWNPEQHSGRL 267 TRG W+ SP +H+ + N +Y SL+ W+ +G+L Sbjct: 1540 TRGDLSSLRWIVSPLRHFQTTNPNVQLCKVYYASLNFWDIMLATGKL 1586
>TRPE_BACST (Q9X6J4) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 508 Score = 28.9 bits (63), Expect = 9.1 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = +3 Query: 132 SPRIFYKGVTGM*NLGGIPRETLYIQQYIFRLPRFVEPRTA*RKVGRSEIRDTFATDEVY 311 SP +FY + G+ +G P + + ++ ++P R+ GRS D DE+Y Sbjct: 281 SPYMFYFRLDGIEIVGSSPEKLIQVRNRRAE----IDPIAGTRRRGRSPAEDEKLADELY 336 Query: 312 H 314 H Sbjct: 337 H 337
>COAT_CAMVE (Q02951) Coat protein| Length = 488 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/54 (22%), Positives = 29/54 (53%) Frame = +1 Query: 124 RSNRQEFFTRGSRECKTWVESPGKHYTSNNIYSGSLDLWNPEQHSGRLGVQRSE 285 + ++Q++ +G ++C+ W+ + HY + S + + Q + +LG+Q E Sbjct: 397 KGSKQKYCPKGKKDCRCWISNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 450
>SCD5_YEAST (P34758) Protein SCD5 (Protein FTB1)| Length = 872 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +1 Query: 169 KTWVESPGKHYTSNNIYSGSLDLWNPEQHSGRLGVQRSEIH 291 +T+++ + T IY G L +QH G+L + S+IH Sbjct: 772 QTYIQQQQQQQTQQRIYGGQLS--QMQQHPGQLHLNNSDIH 810
>PHOE_KLEOX (Q01606) Outer membrane pore protein E precursor| Length = 349 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +1 Query: 124 RSNRQEFFTRGSRECKTWVESPGKHYTSNNIYSGSL 231 R+N Q RG+++ + W + G Y +NNIY ++ Sbjct: 212 RTNDQNLLARGAKKAEAW--ATGLKYDANNIYLATM 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,149,882 Number of Sequences: 219361 Number of extensions: 1732764 Number of successful extensions: 4909 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4909 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)