ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY968588.1| Triticum aestivum ice recrystallization inhibitio... 396 e-107
2emb|AJ277399.1|LPE277399 Lolium perenne partial mRNA for ice rec... 184 2e-43
3gb|AY968589.1| Triticum aestivum ice recrystallization inhibitio... 68 3e-08
4ref|NM_186147.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
6dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
7dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
8dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
9dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
10gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence 48 0.025
11emb|BX248312.11| Zebrafish DNA sequence from clone CH211-139O4, ... 46 0.10
12emb|CR753888.14| Zebrafish DNA sequence from clone CH211-154E10 ... 46 0.10
13gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
15emb|BX072551.7| Zebrafish DNA sequence from clone CH211-117G17 i... 42 1.6
16gb|AC140222.3| Mus musculus BAC clone RP24-330A7 from chromosome... 42 1.6
17emb|AL356971.10| Human DNA sequence from clone RP11-58A9 on chro... 42 1.6
18gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ... 42 1.6
19dbj|AK098142.1| Homo sapiens cDNA FLJ40823 fis, clone TRACH2011093 42 1.6
20ref|NG_004245.1| Homo sapiens olfactory receptor, family 10, sub... 42 1.6
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22dbj|AP000640.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 1.6
23dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.6
24gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, co... 40 6.2
25gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, com... 40 6.2
26gb|AC108773.9| Mus musculus chromosome 5, clone RP23-118L1, comp... 40 6.2
27gb|AC137986.27| Medicago truncatula clone mth2-7g6, complete seq... 40 6.2
28gb|AC130806.58| Medicago truncatula clone mth2-19g23, complete s... 40 6.2
29emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, stra... 40 6.2
30gb|AC010139.4|AC010139 Homo sapiens BAC clone RP11-194G10 from 3... 40 6.2
31gb|AC091493.2| Homo sapiens chromosome 3 clone RP11-357E4 map 3p... 40 6.2
32gb|AC154138.11| Mus musculus 10 BAC RP23-124J6 (Roswell Park Can... 40 6.2
33emb|BX842699.5| Zebrafish DNA sequence from clone CH211-281K12 i... 40 6.2
34emb|AJ748318.1| Bdellovibrio bacteriovorus fliC5 gene for flagellin 40 6.2
35gb|AC027700.11| Mus musculus chromosome 10, clone RP23-145G7, co... 40 6.2
36emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on ch... 40 6.2
37emb|CR812480.14| Zebrafish DNA sequence from clone DKEY-245M7 in... 40 6.2
38emb|AL844535.13| Mouse DNA sequence from clone RP23-211K16 on ch... 40 6.2 
>gb|AY968588.1| Triticum aestivum ice recrystallization inhibition protein 1
            precursor, mRNA, complete cds
          Length = 1079

 Score =  396 bits (200), Expect = e-107
 Identities = 304/336 (90%), Gaps = 7/336 (2%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgctatatatatttatgaggttacataacacgattggccccacc-aagtgattgtgagct 183
            ||||||||||||  |||| |||||||||||| |||| ||||||| ||||||||||| |||
Sbjct: 1064 tgctatatatatccatgaagttacataacactattgaccccacccaagtgattgtgggct 1005

                                                                        
Query: 184  acaccgaactcggacaacaaggtgagctccgtcacggaagatggacac--tccacttaca 241
            |||| ||||| ||||||| |  | |||||| ||| |||||||| | ||  | ||||||||
Sbjct: 1004 acactgaacttggacaaccacataagctccatcaaggaagatgcaaacaattcacttaca 945

                                                                        
Query: 242  aatcatgcatctcctacgactttgttgctcccagatacgacatggttgctcccagataca 301
            |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 944  aatcattcatctcctacgaccttgttgctcccagatacgacatggttgctcccagataca 885

                                                                        
Query: 302  gtgttgttggtcccagatacagtattgtggcttccggatacggtatggaaactcccagat 361
            |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 884  gtgttgttggtcccagatacagtattgtggctcccggatacggtatggaagctcccggat 825

                                                                        
Query: 362  acattattgtcattcccggatacggcattgttgttgtcagttacgatatgtttgtcccca 421
            |||||||||    ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 824  acattattg----tcccggatacggcattgttattgtcagtcacgatatgtttgtcccca 769

                                                
Query: 422  gatacgacatggttgctaccagttacggtattgtcg 457
            ||||| ||||||||||||||||||||||||||||||
Sbjct: 768  gatacaacatggttgctaccagttacggtattgtcg 733
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>emb|AJ277399.1|LPE277399 Lolium perenne partial mRNA for ice recrystallisation inhibition
           protein
          Length = 357

 Score =  184 bits (93), Expect = 2e-43
 Identities = 176/201 (87%), Gaps = 2/201 (0%)
 Strand = Plus / Minus

                                                                       
Query: 257 acgactttgttgctcccagatacgacatggttgctcccagatacagtgttgttggtccca 316
           |||||||||||||| |||||||| || ||||||||||||||||| || |||||| |||| 
Sbjct: 344 acgactttgttgcttccagatacaacgtggttgctcccagatacggtattgttgctcccg 285

                                                                       
Query: 317 gatacagtattgtggcttccggatacggtatggaaactcccagatacattattgtcattc 376
           || ||||||||||| |  |||||||||||||| || ||||| ||||||||||| || |||
Sbjct: 284 gagacagtattgtgccccccggatacggtatgaaagctcccggatacattattatcgttc 225

                                                                       
Query: 377 ccggatacggcattgttgttgtcagttacgatatg-tttgtccccagatacgacatggtt 435
           |||||||||  |||||||||||| || |||||||| ||||||||  ||||||||||||||
Sbjct: 224 ccggatacgttattgttgttgtctgtaacgatatggtttgtccct-gatacgacatggtt 166

                                
Query: 436 gctaccagttacggtattgtc 456
           ||| || ||||||||||||||
Sbjct: 165 gctgccggttacggtattgtc 145
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>gb|AY968589.1| Triticum aestivum ice recrystallization inhibition protein 2
            precursor, mRNA, complete cds
          Length = 1596

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 256  tacgactttgttgctcccagatacgacatggttgctcccagataca 301
            ||||||||||||  ||||||||||||||||||| ||||||||||||
Sbjct: 1239 tacgactttgttattcccagatacgacatggtttctcccagataca 1194



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 155  cgattggccccaccaagtgattgtgagctacaccgaactcggacaa 200
            ||||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 1345 cgattggccccaccaagggattgtgaactacactgaacttggacaa 1300



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 352  actcccagatacattattgtcattcccggata 383
            |||||||| ||||  |||||||||||||||||
Sbjct: 1080 actcccagttacaacattgtcattcccggata 1049
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>ref|NM_186147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3033

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 160  ggccccaccaagtgattgtgagctacaccgaactcggacaacaaggtgagctccgtca 217
            ||||||||||||||||||||||| |||| |||||  ||||| ||||| || |||||||
Sbjct: 1838 ggccccaccaagtgattgtgagccacactgaactttgacaagaaggtcaggtccgtca 1781
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 160    ggccccaccaagtgattgtgagctacaccgaactcggacaacaaggtgagctccgtca 217
              ||||||||||||||||||||||| |||| |||||  ||||| ||||| || |||||||
Sbjct: 425934 ggccccaccaagtgattgtgagccacactgaactttgacaagaaggtcaggtccgtca 425877
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 160   ggccccaccaagtgattgtgagctacaccgaactcggacaacaaggtgagctccgtca 217
             ||||||||||||||||||||||| |||| |||||  ||||| ||||| || |||||||
Sbjct: 28098 ggccccaccaagtgattgtgagccacactgaactttgacaagaaggtcaggtccgtca 28041
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>dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108O10, full
            insert sequence
          Length = 3392

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 160  ggccccaccaagtgattgtgagctacaccgaactcggacaacaaggtgagctccgtca 217
            ||||||||||||||||||||||| |||| |||||  ||||| ||||| || |||||||
Sbjct: 1964 ggccccaccaagtgattgtgagccacactgaactttgacaagaaggtcaggtccgtca 1907
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>dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121E13, full
            insert sequence
          Length = 2958

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 160  ggccccaccaagtgattgtgagctacaccgaactcggacaacaaggtgagctccgtca 217
            ||||||||||||||||||||||| |||| |||||  ||||| ||||| || |||||||
Sbjct: 1502 ggccccaccaagtgattgtgagccacactgaactttgacaagaaggtcaggtccgtca 1445
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>dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B08, full
           insert sequence
          Length = 2238

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 160 ggccccaccaagtgattgtgagctacaccgaactcggacaacaaggtgagctccgtca 217
           ||||||||||||||||||||||| |||| |||||  ||||| ||||| || |||||||
Sbjct: 649 ggccccaccaagtgattgtgagccacactgaactttgacaagaaggtcaggtccgtca 592
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>gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence
          Length = 2283

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 168 caagtgattgtgagctacaccgaactcggacaacaaggtgagctccgt 215
           ||||||||||||||| || | ||||| |||||  ||||||||||||||
Sbjct: 775 caagtgattgtgagccacgctgaacttggacaggaaggtgagctccgt 728
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>emb|BX248312.11| Zebrafish DNA sequence from clone CH211-139O4, complete sequence
          Length = 164857

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 87     gatatttttagggaaatattatt 109
              |||||||||||||||||||||||
Sbjct: 109299 gatatttttagggaaatattatt 109321
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>emb|CR753888.14| Zebrafish DNA sequence from clone CH211-154E10 in linkage group 5,
             complete sequence
          Length = 161155

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 84    taagatatttttagggaaatatt 106
             |||||||||||||||||||||||
Sbjct: 67397 taagatatttttagggaaatatt 67375
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>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 71    gtcagcatgtatataagatattttt 95
             ||||| |||||||||||||||||||
Sbjct: 28119 gtcaggatgtatataagatattttt 28095
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 71       gtcagcatgtatataagatattttt 95
                ||||| |||||||||||||||||||
Sbjct: 30775664 gtcaggatgtatataagatattttt 30775688
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>emb|BX072551.7| Zebrafish DNA sequence from clone CH211-117G17 in linkage group 17,
              complete sequence
          Length = 164264

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    tatgttgctatatatatttat 140
              |||||||||||||||||||||
Sbjct: 139840 tatgttgctatatatatttat 139820
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>gb|AC140222.3| Mus musculus BAC clone RP24-330A7 from chromosome 9, complete sequence
          Length = 145102

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    ttttagggaaatattatttaa 112
             |||||||||||||||||||||
Sbjct: 37221 ttttagggaaatattatttaa 37201
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>emb|AL356971.10| Human DNA sequence from clone RP11-58A9 on chromosome 6, complete
             sequence
          Length = 116576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    atatttttagggaaatattat 108
             |||||||||||||||||||||
Sbjct: 40334 atatttttagggaaatattat 40354
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>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 71    gtcagcatgtatataagatattttt 95
             ||||| |||||||||||||||||||
Sbjct: 84365 gtcaggatgtatataagatattttt 84389
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>dbj|AK098142.1| Homo sapiens cDNA FLJ40823 fis, clone TRACH2011093
          Length = 2364

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 121  atgttgctatatatatttatgaggt 145
            |||||||||||||| ||||||||||
Sbjct: 1753 atgttgctatatatgtttatgaggt 1777
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>ref|NG_004245.1| Homo sapiens olfactory receptor, family 10, subfamily Y, member 1
            pseudogene (OR10Y1P) on chromosome 11
          Length = 1174

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   ttagggaaatattatttaagcaggaatat 122
            ||||||||||||| |||||| ||||||||
Sbjct: 1076 ttagggaaatattttttaagaaggaatat 1048
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 71       gtcagcatgtatataagatattttt 95
                ||||| |||||||||||||||||||
Sbjct: 30867087 gtcaggatgtatataagatattttt 30867111
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>dbj|AP000640.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-26D16, complete
             sequence
          Length = 156734

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 94    ttagggaaatattatttaagcaggaatat 122
             ||||||||||||| |||||| ||||||||
Sbjct: 68802 ttagggaaatattttttaagaaggaatat 68774
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>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete
              sequence
          Length = 167444

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 121    atgttgctatatatatttatgaggt 145
              |||||||||||||| ||||||||||
Sbjct: 101885 atgttgctatatatgtttatgaggt 101861
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>gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, complete sequence
          Length = 185786

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   tcccagatacattattgtcattcc 377
             ||||||| ||||||||||||||||
Sbjct: 77601 tcccagagacattattgtcattcc 77578
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>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence
          Length = 227254

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 354   tcccagatacattattgtcattcc 377
             ||||||| ||||||||||||||||
Sbjct: 62492 tcccagagacattattgtcattcc 62515
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>gb|AC108773.9| Mus musculus chromosome 5, clone RP23-118L1, complete sequence
          Length = 222706

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aagatatttttagggaaata 104
             ||||||||||||||||||||
Sbjct: 45559 aagatatttttagggaaata 45578
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>gb|AC137986.27| Medicago truncatula clone mth2-7g6, complete sequence
          Length = 128361

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tttttagggaaatattattt 110
             ||||||||||||||||||||
Sbjct: 39971 tttttagggaaatattattt 39990
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>gb|AC130806.58| Medicago truncatula clone mth2-19g23, complete sequence
          Length = 141498

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ttgttcataagagaccatgc 32
              ||||||||||||||||||||
Sbjct: 126273 ttgttcataagagaccatgc 126292
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>emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 9/11
          Length = 344249

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ccgaactcggacaacaaggt 206
              ||||||||||||||||||||
Sbjct: 180716 ccgaactcggacaacaaggt 180735
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>gb|AC010139.4|AC010139 Homo sapiens BAC clone RP11-194G10 from 3, complete sequence
          Length = 161407

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aatattatttaagcaggaat 120
              ||||||||||||||||||||
Sbjct: 107126 aatattatttaagcaggaat 107107
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>gb|AC091493.2| Homo sapiens chromosome 3 clone RP11-357E4 map 3p, complete sequence
          Length = 186953

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   aatattatttaagcaggaat 120
             ||||||||||||||||||||
Sbjct: 12359 aatattatttaagcaggaat 12340
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>gb|AC154138.11| Mus musculus 10 BAC RP23-124J6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 179306

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ttcccggatacggcattgtt 393
              ||||||||||||||||||||
Sbjct: 170133 ttcccggatacggcattgtt 170114
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>emb|BX842699.5| Zebrafish DNA sequence from clone CH211-281K12 in linkage group 4,
             complete sequence
          Length = 86258

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    atgtatataagatattttta 96
             ||||||||||||||||||||
Sbjct: 42287 atgtatataagatattttta 42268
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>emb|AJ748318.1| Bdellovibrio bacteriovorus fliC5 gene for flagellin
          Length = 3949

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  ccgaactcggacaacaaggt 206
            ||||||||||||||||||||
Sbjct: 3181 ccgaactcggacaacaaggt 3200
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>gb|AC027700.11| Mus musculus chromosome 10, clone RP23-145G7, complete sequence
          Length = 227454

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    ttcccggatacggcattgtt 393
              ||||||||||||||||||||
Sbjct: 189825 ttcccggatacggcattgtt 189844
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>emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on chromosome 13, complete
            sequence
          Length = 144243

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 85   aagatatttttagggaaatattat 108
            |||||||||||||| |||||||||
Sbjct: 5054 aagatatttttaggaaaatattat 5077
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>emb|CR812480.14| Zebrafish DNA sequence from clone DKEY-245M7 in linkage group 14,
             complete sequence
          Length = 157321

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    gatatttttagggaaatatt 106
             ||||||||||||||||||||
Sbjct: 14851 gatatttttagggaaatatt 14870
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>emb|AL844535.13| Mouse DNA sequence from clone RP23-211K16 on chromosome 2, complete
              sequence
          Length = 204676

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     agagaccatgcttggtttac 41
              ||||||||||||||||||||
Sbjct: 130688 agagaccatgcttggtttac 130669


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,235,352
Number of Sequences: 3902068
Number of extensions: 4235352
Number of successful extensions: 77913
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77742
Number of HSP's gapped (non-prelim): 158
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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