Clone Name | basd3p24 |
---|---|
Clone Library Name | barley_pub |
>gb|AF475123.1| Triticum aestivum acidic ribosomal protein P2a-2 mRNA, partial cds Length = 339 Score = 321 bits (162), Expect = 1e-84 Identities = 183/190 (96%) Strand = Plus / Plus Query: 1 tcaccgagctcttggctgctggcagggagaagtttgctgcggttccatctggtggtggtg 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 149 tcaccgagctcttggctgctggtagggagaagtttgctgcggttccatctggtggtggtg 208 Query: 61 gcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccctgcagctgagt 120 | |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 209 gtgtggctgtttcagctgctgcccctgctgctggaggtgctgctgcccctgcagctgagt 268 Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtc 180 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 269 caaagaaagaagagaaggtcgtggagaaggaagagagtgatgatgacatgggcttcagtc 328 Query: 181 tgttcgacta 190 |||||||||| Sbjct: 329 tgttcgacta 338
>gb|AF475097.1| Triticum aestivum acidic ribosomal protein P2 mRNA, partial cds Length = 339 Score = 321 bits (162), Expect = 1e-84 Identities = 183/190 (96%) Strand = Plus / Plus Query: 1 tcaccgagctcttggctgctggcagggagaagtttgctgcggttccatctggtggtggtg 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 149 tcaccgagctcttggctgctggtagggagaagtttgctgcggttccatctggtggtggtg 208 Query: 61 gcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccctgcagctgagt 120 | |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 209 gtgtggctgtttcagctgctgcccctgctgctggaggtgctgctgcccctgcagctgagt 268 Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtc 180 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 269 caaagaaagaagagaaggtcgtggagaaggaagagagtgatgatgacatgggcttcagtc 328 Query: 181 tgttcgacta 190 |||||||||| Sbjct: 329 tgttcgacta 338
>ref|NM_189662.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 408 Score = 141 bits (71), Expect = 2e-30 Identities = 148/173 (85%), Gaps = 3/173 (1%) Strand = Plus / Plus Query: 20 tggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgc 79 ||||||||||||||||||| | |||||||||||||||||||| || |||||| | ||||| Sbjct: 234 tggcagggagaagtttgcttcagttccatctggtggtggtggtgtagctgttgctgctgc 293 Query: 80 tgctccctctgctggaggtgc---tgctgcccctgcagctgagtcaaagaaagaagagaa 136 |||||| |||| || ||||| || ||| |||||||||||| | ||||||||||| || Sbjct: 294 tgctcctgctgccggtggtgctggtggtgctcctgcagctgaggcgaagaaagaagataa 353 Query: 137 ggtcgtggagaaggaagagagcgacgatgacatgggcttcagtctgttcgact 189 ||||| ||||||||||| || || |||||||||||||||||| |||| |||| Sbjct: 354 ggtcgaagagaaggaagaaagtgatgatgacatgggcttcagtttgtttgact 406
>dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F04, full insert sequence Length = 693 Score = 141 bits (71), Expect = 2e-30 Identities = 148/173 (85%), Gaps = 3/173 (1%) Strand = Plus / Plus Query: 20 tggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgc 79 ||||||||||||||||||| | |||||||||||||||||||| || |||||| | ||||| Sbjct: 261 tggcagggagaagtttgcttcagttccatctggtggtggtggtgtagctgttgctgctgc 320 Query: 80 tgctccctctgctggaggtgc---tgctgcccctgcagctgagtcaaagaaagaagagaa 136 |||||| |||| || ||||| || ||| |||||||||||| | ||||||||||| || Sbjct: 321 tgctcctgctgccggtggtgctggtggtgctcctgcagctgaggcgaagaaagaagataa 380 Query: 137 ggtcgtggagaaggaagagagcgacgatgacatgggcttcagtctgttcgact 189 ||||| ||||||||||| || || |||||||||||||||||| |||| |||| Sbjct: 381 ggtcgaagagaaggaagaaagtgatgatgacatgggcttcagtttgtttgact 433
>emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein Length = 544 Score = 121 bits (61), Expect = 2e-24 Identities = 159/191 (83%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 1 tcaccgagctcttggctgctggcagggagaagtttgctgcggttccatctggtggtggtg 60 ||||||||||| | || || |||||||||||||||||| | || |||| |||||| || | Sbjct: 194 tcaccgagctcattgccgcgggcagggagaagtttgcttcagtcccatgtggtggcggcg 253 Query: 61 gcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccctgcagctgagt 120 | || |||||| | || ||||| || ||||||| || |||||| |||||||||||| Sbjct: 254 gtgtcgctgttgcggcagctgcacctgctgctggcggagctgct---cctgcagctgagg 310 Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtc 180 ||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 311 caaagaaagaagagaaggtggaagagaaggaagaaagcgatgatgatatgggcttcagcc 370 Query: 181 tgttcgactag 191 | ||||||||| Sbjct: 371 tcttcgactag 381
>gb|U62749.1|ZMU62749 Zea mays acidic ribosomal protein P2a-3 (rpp2a-3) mRNA, partial cds Length = 465 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 102 gctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgac 161 ||||| |||||||||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 231 gctgctcctgcagctgaggcgaagaaagaagagaaggtggaggagaaggaagagagcgac 290 Query: 162 gatgacatgggcttcagtctgttcgact 189 ||||||||||||||||| || ||||||| Sbjct: 291 gatgacatgggcttcagcctcttcgact 318
>gb|U62748.1|ZMU62748 Zea mays acidic ribosomal protein P2a-2 (rpp2a-2) mRNA, complete cds Length = 625 Score = 113 bits (57), Expect = 5e-22 Identities = 158/191 (82%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 1 tcaccgagctcttggctgctggcagggagaagtttgctgcggttccatctggtggtggtg 60 ||||||||||| | || || |||||||||||||||||| | || |||| |||||| |||| Sbjct: 204 tcaccgagctcattgccgcgggcagggagaagtttgcttcagtcccatgtggtggcggtg 263 Query: 61 gcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccctgcagctgagt 120 | || |||||| | || ||| | || ||||||| || |||||| ||| |||||||| Sbjct: 264 gtgtcgctgttgcggcagcttcacctgctgctggcggagctgct---cctacagctgagg 320 Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtc 180 ||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 321 caaagaaagaagagaaggtggaagagaaggaagaaagcgatgatgatatgggcttcagcc 380 Query: 181 tgttcgactag 191 | ||||||||| Sbjct: 381 tcttcgactag 391
>gb|AY103566.1| Zea mays PCO075293 mRNA sequence Length = 812 Score = 113 bits (57), Expect = 5e-22 Identities = 158/191 (82%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 1 tcaccgagctcttggctgctggcagggagaagtttgctgcggttccatctggtggtggtg 60 ||||||||||| | || || |||||||||||||||||| | || |||| |||||| || | Sbjct: 313 tcaccgagctcattgccgcgggcagggagaagtttgcttcagtcccatgtggtggcggcg 372 Query: 61 gcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccctgcagctgagt 120 | || |||||| | || ||||| || ||||||| || |||||| | |||||||||| Sbjct: 373 gtgtcgctgttgcggcagctgcacctgctgctggcggagctgcttc---tgcagctgagg 429 Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtc 180 ||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 430 caaagaaagaagagaaggtggaagagaaggaagaaagcgatgatgatatgggcttcagcc 489 Query: 181 tgttcgactag 191 | ||||||||| Sbjct: 490 tcttcgactag 500
>gb|BT018926.1| Zea mays clone Contig52.F mRNA sequence Length = 699 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 102 gctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgac 161 ||||| |||||||||||| | ||||||||||||||||| | |||||||||||||||||| Sbjct: 346 gctgctcctgcagctgaggcgaagaaagaagagaaggtggaggagaaggaagagagcgat 405 Query: 162 gatgacatgggcttcagtctgttcgact 189 ||||||||||||||||| || ||||||| Sbjct: 406 gatgacatgggcttcagcctcttcgact 433
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 2e-21 Identities = 118/138 (85%), Gaps = 3/138 (2%) Strand = Plus / Plus Query: 20 tggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgc 79 ||||||||||||||||||| | |||||||||||||||||||| || |||||| | ||||| Sbjct: 4852737 tggcagggagaagtttgcttcagttccatctggtggtggtggtgtagctgttgctgctgc 4852796 Query: 80 tgctccctctgctggaggtgc---tgctgcccctgcagctgagtcaaagaaagaagagaa 136 |||||| |||| || ||||| || ||| |||||||||||| | ||||||||||| || Sbjct: 4852797 tgctcctgctgccggtggtgctggtggtgctcctgcagctgaggcgaagaaagaagataa 4852856 Query: 137 ggtcgtggagaaggaaga 154 ||||| ||||||||||| Sbjct: 4852857 ggtcgaagagaaggaaga 4852874 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 36388926 ggtcgtggagaaggaagagag 36388946
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 111 bits (56), Expect = 2e-21 Identities = 118/138 (85%), Gaps = 3/138 (2%) Strand = Plus / Plus Query: 20 tggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgc 79 ||||||||||||||||||| | |||||||||||||||||||| || |||||| | ||||| Sbjct: 97386 tggcagggagaagtttgcttcagttccatctggtggtggtggtgtagctgttgctgctgc 97445 Query: 80 tgctccctctgctggaggtgc---tgctgcccctgcagctgagtcaaagaaagaagagaa 136 |||||| |||| || ||||| || ||| |||||||||||| | ||||||||||| || Sbjct: 97446 tgctcctgctgccggtggtgctggtggtgctcctgcagctgaggcgaagaaagaagataa 97505 Query: 137 ggtcgtggagaaggaaga 154 ||||| ||||||||||| Sbjct: 97506 ggtcgaagagaaggaaga 97523
>gb|U29383.1|ZMU29383 Zea mays acidic ribosomal protein P2 (RPA-2A1) mRNA, complete cds Length = 601 Score = 105 bits (53), Expect = 1e-19 Identities = 157/191 (82%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 1 tcaccgagctcttggctgctggcagggagaagtttgctgcggttccatctggtggtggtg 60 ||||||||||| | || || |||||||||||||||||| | || |||| |||||| || | Sbjct: 207 tcaccgagctcattgccgcgggcagggagaagtttgcttcagtcccatgtggtggcggcg 266 Query: 61 gcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccctgcagctgagt 120 | || |||||| | || ||||| || ||||||| || |||| |||||||||||| Sbjct: 267 gtgtcgctgttgcggcagctgcacctgctgctggcggacgtgct---cctgcagctgagg 323 Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtc 180 ||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 324 caaagaaagaagagaaggtggaagagaaggaagaaagcgatgatgatatgggcttcagcc 383 Query: 181 tgttcgactag 191 | ||||||||| Sbjct: 384 tcttcgactag 394
>ref|XM_466076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 673 Score = 101 bits (51), Expect = 2e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 25 gggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgctgctc 84 |||||||||||||| | ||||||| ||| || |||||||| |||||| |||| ||||||| Sbjct: 286 gggagaagtttgcttctgttccatgtggcggaggtggcgtagctgttgcagcagctgctc 345 Query: 85 cctctgctggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtgg 144 | ||||||| |||| ||||| ||| | ||||| | ||||||||||||||||| | || Sbjct: 346 cggctgctggtggtggagctgctcctcaatctgaggctaagaaagaagagaaggtggagg 405 Query: 145 agaaggaagagagcgacgatgacatgggcttcagtctgttcgactag 191 |||| ||||| || |||||||||||||||||| |||| |||||| Sbjct: 406 agaaagaagaatctgatgatgacatgggcttcagtttgtttgactag 452
>dbj|AK120980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A15, full insert sequence Length = 672 Score = 101 bits (51), Expect = 2e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 25 gggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgctgctc 84 |||||||||||||| | ||||||| ||| || |||||||| |||||| |||| ||||||| Sbjct: 285 gggagaagtttgcttctgttccatgtggcggaggtggcgtagctgttgcagcagctgctc 344 Query: 85 cctctgctggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtgg 144 | ||||||| |||| ||||| ||| | ||||| | ||||||||||||||||| | || Sbjct: 345 cggctgctggtggtggagctgctcctcaatctgaggctaagaaagaagagaaggtggagg 404 Query: 145 agaaggaagagagcgacgatgacatgggcttcagtctgttcgactag 191 |||| ||||| || |||||||||||||||||| |||| |||||| Sbjct: 405 agaaagaagaatctgatgatgacatgggcttcagtttgtttgactag 451
>gb|U62750.1|ZMU62750 Zea mays acidic ribosomal protein P2a-4 (rpp2a-4) mRNA, partial cds Length = 497 Score = 95.6 bits (48), Expect = 1e-16 Identities = 153/188 (81%) Strand = Plus / Plus Query: 3 accgagctcttggctgctggcagggagaagtttgctgcggttccatctggtggtggtggc 62 ||||||||| | || || |||||||||||||||||| | || |||| ||| ||||| || Sbjct: 101 accgagctcattgccgccggcagggagaagtttgcttcagtcccatgtggcggtggcggt 160 Query: 63 gtggctgtttcagctgctgctccctctgctggaggtgctgctgcccctgcagctgagtca 122 |||||||| | || ||||| || ||||||| || | | || |||||||||||| | Sbjct: 161 gtggctgtcgcggcagctgcccctgctgctggcggcggcggcgctcctgcagctgaggcg 220 Query: 123 aagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtctg 182 ||||||||||||||||| | |||||||||||| || || || |||||||||||||| || Sbjct: 221 aagaaagaagagaaggtggaggagaaggaagaaagtgatgacgacatgggcttcagcctc 280 Query: 183 ttcgacta 190 |||||||| Sbjct: 281 ttcgacta 288
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 25 gggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgctgctc 84 |||||||||||||| | ||||||| ||| || |||||||| |||||| |||| ||||||| Sbjct: 19475313 gggagaagtttgcttctgttccatgtggcggaggtggcgtagctgttgcagcagctgctc 19475254 Query: 85 cctctgctggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtgg 144 | ||||||| |||| ||||| ||| | ||||| | ||||||||||||||||| | || Sbjct: 19475253 cggctgctggtggtggagctgctcctcaatctgaggctaagaaagaagagaaggtggagg 19475194 Query: 145 agaaggaaga 154 |||| ||||| Sbjct: 19475193 agaaagaaga 19475184
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 83.8 bits (42), Expect = 4e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 25 gggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctgctgctc 84 |||||||||||||| | ||||||| ||| || |||||||| |||||| |||| ||||||| Sbjct: 92840 gggagaagtttgcttctgttccatgtggcggaggtggcgtagctgttgcagcagctgctc 92781 Query: 85 cctctgctggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtgg 144 | ||||||| |||| ||||| ||| | ||||| | ||||||||||||||||| | || Sbjct: 92780 cggctgctggtggtggagctgctcctcaatctgaggctaagaaagaagagaaggtggagg 92721 Query: 145 agaaggaaga 154 |||| ||||| Sbjct: 92720 agaaagaaga 92711
>gb|AY081851.1| Prunus dulcis 60s acidic ribosomal protein (AL60SRP) mRNA, complete cds Length = 604 Score = 79.8 bits (40), Expect = 7e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 ||||||||||| ||||||||||||||||||| | |||||| || || | ||| ||||| | Sbjct: 300 ctgcagctgagccaaagaaagaagagaaggttgaggagaaagaggataccgatgatgata 359 Query: 169 tgggcttcagtctgttcgactaga 192 ||||||||||||| || ||||||| Sbjct: 360 tgggcttcagtctctttgactaga 383
>gb|AY846829.1| Triticum aestivum ribosomal protein P1 mRNA, complete cds Length = 362 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 147 aaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 306 aaggaagagagcgatgatgacatgggcttcagcttgttcgacta 349
>gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, partial cds Length = 417 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 108 cctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgac 167 ||||| |||||||||||||| || |||||||| | ||||||||||| || || ||| Sbjct: 334 cctgctgctgagtcaaagaaggaggagaaggttgaagagaaggaagaatctgatgaagac 393 Query: 168 atgggcttcagtctgttcgacta 190 ||||| ||||||||||||||||| Sbjct: 394 atgggtttcagtctgttcgacta 416
>gb|AY106007.1| Zea mays PCO073423 mRNA sequence Length = 775 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgactaga 192 ||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 395 ggagaaggaagagagcgacgacgacatgggattctccctgttcgactaga 444
>gb|U62751.1|ZMU62751 Zea mays acidic ribosomal protein P3a (rpp3a) mRNA, complete cds Length = 812 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgactaga 192 ||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 462 ggagaaggaagagagcgacgacgacatgggattctccctgttcgactaga 511
>ref|XM_479786.1| Oryza sativa (japonica cultivar-group), mRNA Length = 631 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 146 gaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 371 gaaggaggagagcgacgatgacatgggtttcagcttgttcgacta 415
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 146 gaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 899004 gaaggaggagagcgacgatgacatgggtttcagcttgttcgacta 899048 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 8338043 ggtcgtggagaaggaagagag 8338023
>dbj|D29689.1|RICYK1 Oryza sativa mRNA, sequence homologous to acidic ribosomal protein P2 gene Length = 341 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 146 gaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 80 gaaggaggagagcgacgatgacatgggtttcagcttgttcgacta 124
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 146 gaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 61742 gaaggaggagagcgacgatgacatgggtttcagcttgttcgacta 61786
>dbj|AK060433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-B07, full insert sequence Length = 278 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 146 gaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 44 gaaggaggagagcgacgatgacatgggtttcagcttgttcgacta 88
>dbj|AK058240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G09, full insert sequence Length = 631 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 146 gaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 371 gaaggaggagagcgacgatgacatgggtttcagcttgttcgacta 415
>ref|XM_505050.1| Yarrowia lipolytica CLIB122, YALI0F05808g predicted mRNA Length = 327 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 279 ggagaaggaggagtccgacgacgacatgggcttcggtctgttcgacta 326
>gb|AY290723.1| Triticum aestivum acidic ribosomal protein P1a-like mRNA, partial sequence Length = 597 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 147 aaggaagagagcgacgatgacatgggcttcag 178 |||||||||||||| ||||||||||||||||| Sbjct: 338 aaggaagagagcgatgatgacatgggcttcag 369
>emb|X77253.1|CHHIII C.herbarum Cla h III mRNA Length = 630 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 307 ggagaaggaggagtccgacgacgacatgggcttcggtctgttcgacta 354
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 864663 ggagaaggaggagtccgacgacgacatgggcttcggtctgttcgacta 864710
>ref|NM_128331.3| Arabidopsis thaliana structural constituent of ribosome AT2G27720 mRNA, complete cds Length = 672 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaa 152 ||||||| || ||| ||||| |||||||| ||||||||||||||| | ||||| ||| Sbjct: 366 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaagaaagaagagaaagaa 425 Query: 153 gagagcgacgatgacatgggcttcagtctgttcga 187 || ||| ||||||||||| |||||| ||||||| Sbjct: 426 gaatccgatgatgacatgggtttcagtttgttcga 460
>ref|XM_745339.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g06830) partial mRNA Length = 336 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 144 gagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 289 gagaaggaggagtccgacgaggacatgggcttcggtctgttcgacta 335
>ref|XM_501173.1| Yarrowia lipolytica CLIB122, YALI0B21252g predicted mRNA Length = 324 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 132 gagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| | ||||||||| ||| ||| ||||||||||||||| |||| |||||||| Sbjct: 265 gagaaggttgaggagaaggaggagtccgatgatgacatgggcttcggtctcttcgacta 323
>gb|AY093717.1| Arabidopsis thaliana At2g27720/F15K20.18 mRNA, complete cds Length = 348 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaa 152 ||||||| || ||| ||||| |||||||| ||||||||||||||| | ||||| ||| Sbjct: 250 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaagaaagaagagaaagaa 309 Query: 153 gagagcgacgatgacatgggcttcagtctgttcga 187 || ||| ||||||||||| |||||| ||||||| Sbjct: 310 gaatccgatgatgacatgggtttcagtttgttcga 344
>gb|AF268869.1| Aspergillus fumigatus acidic ribosomal protein P1 gene, complete cds Length = 1637 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 144 gagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||| |||||| |||||||||||| ||||||||||||| Sbjct: 995 gagaaggaggagtccgacgaggacatgggcttcggtctgttcgacta 1041
>gb|AF410295.1|AF410295 Arabidopsis thaliana At2g27720/F15K20.18 mRNA, complete cds Length = 542 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaa 152 ||||||| || ||| ||||| |||||||| ||||||||||||||| | ||||| ||| Sbjct: 323 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaagaaagaagagaaagaa 382 Query: 153 gagagcgacgatgacatgggcttcagtctgttcga 187 || ||| ||||||||||| |||||| ||||||| Sbjct: 383 gaatccgatgatgacatgggtttcagtttgttcga 417
>emb|BX821300.1|CNS0A8EB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 585 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaa 152 ||||||| || ||| ||||| |||||||| ||||||||||||||| | ||||| ||| Sbjct: 312 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaagaaagaagagaaagaa 371 Query: 153 gagagcgacgatgacatgggcttcagtctgttcga 187 || ||| ||||||||||| |||||| ||||||| Sbjct: 372 gaatccgatgatgacatgggtttcagtttgttcga 406
>emb|BX822066.1|CNS0A897 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 614 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaa 152 ||||||| || ||| ||||| |||||||| ||||||||||||||| | ||||| ||| Sbjct: 308 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaagaaagaagagaaagaa 367 Query: 153 gagagcgacgatgacatgggcttcagtctgttcga 187 || ||| ||||||||||| |||||| ||||||| Sbjct: 368 gaatccgatgatgacatgggtttcagtttgttcga 402
>gb|AY087501.1| Arabidopsis thaliana clone 36076 mRNA, complete sequence Length = 561 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaa 152 ||||||| || ||| ||||| |||||||| ||||||||||||||| | || |||||| Sbjct: 323 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaa 382 Query: 153 gagagcgacgatgacatgggcttcagtctgttcga 187 || ||| ||||||||||| |||||||| ||||| Sbjct: 383 gaatccgatgatgacatgggtttcagtctattcga 417
>gb|AY085945.1| Arabidopsis thaliana clone 19986 mRNA, complete sequence Length = 621 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaa 152 ||||||| || ||| ||||| |||||||| ||||||||||||||| | ||||| ||| Sbjct: 366 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaagaaagaagagaaagaa 425 Query: 153 gagagcgacgatgacatgggcttcagtctgttcga 187 || ||| ||||||||||| |||||| ||||||| Sbjct: 426 gaatccgatgatgacatgggtttcagtttgttcga 460
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 132 gagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| | ||||||||| ||| ||| ||||||||||||||| |||| |||||||| Sbjct: 2788332 gagaaggttgaggagaaggaggagtccgatgatgacatgggcttcggtctcttcgacta 2788390
>gb|BT016372.1| Zea mays clone Contig205 mRNA sequence Length = 576 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgactaga 192 ||||||||||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 337 ggagaaggaagagagcgacgaccacatgggattctccctgttcgactaga 386
>gb|AF434667.1| Rhodotorula glutinis acyl carrier protein mRNA, complete cds Length = 565 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 153 gagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||| |||||||||||| |||| |||||||| Sbjct: 359 gagagcgacgacgacatgggcttcggtctcttcgacta 396
>dbj|AK121459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143J09, full insert sequence Length = 782 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcag 178 |||||||||| |||||||||| |||||||||||| || ||||||||||| ||||| Sbjct: 353 caaagaaagaggagaaggtcgaagagaaggaagagtctgatgatgacatgggtttcag 410 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 15 gctgctggcagggagaagtttgctgcggttccatctggtggtggtgg 61 |||||||| ||||||||||||||| | || || || ||||||||||| Sbjct: 247 gctgctggaagggagaagtttgcttctgtgccctcaggtggtggtgg 293
>dbj|AK058730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F09, full insert sequence Length = 460 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 121 caaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgacatgggcttcag 178 |||||||||| |||||||||| |||||||||||| || ||||||||||| ||||| Sbjct: 160 caaagaaagaggagaaggtcgaagagaaggaagagtctgatgatgacatgggtttcag 217 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 15 gctgctggcagggagaagtttgctgcggttccatctggtggtggtgg 61 |||||||| ||||||||||||||| | || || || ||||||||||| Sbjct: 54 gctgctggaagggagaagtttgcttctgtgccctcaggtggtggtgg 100
>ref|XM_806544.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506879.60) partial mRNA Length = 579 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 63 gtggctgtttcagctgctgctccct 87 ||||||||||||||||||||||||| Sbjct: 215 gtggctgtttcagctgctgctccct 191
>dbj|AB226278.1| Aspergillus oryzae cDNA, contig sequence: AoEST3139 Length = 1168 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||||||||||| |||| |||||||| Sbjct: 1002 cgacgatgacatgggcttcggtcttttcgacta 1034
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||||||||||| |||| |||||||| Sbjct: 2149045 cgacgatgacatgggcttcggtcttttcgacta 2149077 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 aggaagagagcgacgatgacatgg 171 ||||||||||||||||||| |||| Sbjct: 814414 aggaagagagcgacgatgaaatgg 814437
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete sequence Length = 118196 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 93 ggaggtgctgctgcccctgcagctgagtcaaagaaagaagagaag 137 ||||||| || ||| ||||| |||||||| ||||||||||||||| Sbjct: 60494 ggaggtggtggtgctcctgctgctgagtccaagaaagaagagaag 60450 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 109 ctgcagctgagtcaaagaaagaagagaag 137 |||| |||||||| ||||||||||||||| Sbjct: 62194 ctgctgctgagtccaagaaagaagagaag 62166
>gb|AF034539.1| Leishmania donovani acidic ribosomal protein-1 gene, complete cds Length = 392 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||||||||||| |||| |||||||| Sbjct: 328 cgacgatgacatgggcttcggtctcttcgacta 360
>gb|AF045020.1|AF045020 Leishmania braziliensis acidic ribosomal P2 beta protein mRNA, complete cds Length = 456 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||||||||||||||| ||||||||||||| Sbjct: 290 cgacgatgacatgggctttggtctgttcgacta 322
>emb|X68016.1|LILIPB L.infantum LiP' gene for acidic ribosomal protein LiP' Length = 2936 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| ||||||||||||| Sbjct: 2003 cgacgacgacatgggcttcggtctgttcgacta 2035 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| ||||||||||||| Sbjct: 621 cgacgacgacatgggcttcggtctgttcgacta 653
>ref|NM_202655.1| Arabidopsis thaliana structural constituent of ribosome AT3G44590 transcript variant AT3G44590.2 mRNA, complete cds Length = 548 Score = 48.1 bits (24), Expect = 0.024 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 19 ctggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctg 78 |||| ||||||||||| || | || ||||||||||||||| |||||||||||||||| Sbjct: 212 ctggtagggagaagttagcgtctgtgccatctggtggtggt---gtggctgtttcagctg 268 Query: 79 ct 80 || Sbjct: 269 ct 270
>ref|NM_114327.3| Arabidopsis thaliana structural constituent of ribosome AT3G44590 transcript variant AT3G44590.1 mRNA, complete cds Length = 622 Score = 48.1 bits (24), Expect = 0.024 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 19 ctggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctg 78 |||| ||||||||||| || | || ||||||||||||||| |||||||||||||||| Sbjct: 239 ctggtagggagaagttagcgtctgtgccatctggtggtggt---gtggctgtttcagctg 295 Query: 79 ct 80 || Sbjct: 296 ct 297
>ref|XM_369279.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06185.4) partial mRNA Length = 330 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 282 ggagaaggaggagtccgacgaggacatgggcttcggtctcttcgacta 329
>gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete sequence Length = 185417 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 81093 gacgacgacatgggcttcggtctgttcgacta 81124
>gb|AY702008.1| Leishmania donovani strain MHOM/IN/1983/AG83 acidic ribosomal protein mRNA, complete cds Length = 455 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgact 189 ||||||||||||||||||| |||| ||||||| Sbjct: 300 cgacgatgacatgggcttcggtctcttcgact 331
>ref|XM_755686.1| Ustilago maydis 521 hypothetical protein (UM04632.1) partial mRNA Length = 336 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||||| ||| || |||||||||||| |||| |||||||| Sbjct: 288 ggagaaggaagagtccgatgacgacatgggcttcggtctcttcgacta 335
>ref|XM_750250.1| Aspergillus fumigatus Af293 60S acidic ribosomal protein P2 (Afu2g10100) partial mRNA Length = 336 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 288 ggagaaggaggagtccgacgaggacatgggcttcggtcttttcgacta 335
>emb|AL353818.1|ATF14L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F14L2 Length = 107027 Score = 48.1 bits (24), Expect = 0.024 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 19 ctggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctg 78 |||| ||||||||||| || | || ||||||||||||||| |||||||||||||||| Sbjct: 95717 ctggtagggagaagttagcgtctgtgccatctggtggtggt---gtggctgtttcagctg 95773 Query: 79 ct 80 || Sbjct: 95774 ct 95775
>gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone BACR04A24, complete sequence Length = 166677 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 86523 gacgacgacatgggcttcggtctgttcgacta 86554
>ref|NM_057282.3| Drosophila melanogaster Ribosomal protein LP1 CG4087-RA (RpLP1), mRNA Length = 631 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 451 gacgacgacatgggcttcggtctgttcgacta 482
>gb|AF268870.1| Aspergillus fumigatus acidic ribosomal protein P2 gene, complete cds Length = 1731 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 1213 ggagaaggaggagtccgacgaggacatgggcttcggtcttttcgacta 1260
>gb|AY069125.1| Drosophila melanogaster GH13422 full length cDNA Length = 647 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 451 gacgacgacatgggcttcggtctgttcgacta 482
>gb|S62170.1| rp21C=acidic ribosomal protein rpA2 [Drosophila melanogaster, Kc 7E10(0) cells, mRNA, 504 nt] Length = 504 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 314 gacgacgacatgggcttcggtctgttcgacta 345
>emb|BX825897.1|CNS0A56W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 565 Score = 48.1 bits (24), Expect = 0.024 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 19 ctggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctg 78 |||| ||||||||||| || | || ||||||||||||||| |||||||||||||||| Sbjct: 214 ctggtagggagaagttagcgtctgtgccatctggtggtggt---gtggctgtttcagctg 270 Query: 79 ct 80 || Sbjct: 271 ct 272
>emb|BX825458.1|CNS0A4ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 503 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 53 tggtggtggcgtggctgtttcagctgct 80 ||||||||| |||||||||||||||||| Sbjct: 243 tggtggtggtgtggctgtttcagctgct 270
>gb|BT004748.1| Arabidopsis thaliana At3g44590 gene, complete cds Length = 336 Score = 48.1 bits (24), Expect = 0.024 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 19 ctggcagggagaagtttgctgcggttccatctggtggtggtggcgtggctgtttcagctg 78 |||| ||||||||||| || | || ||||||||||||||| |||||||||||||||| Sbjct: 170 ctggtagggagaagttagcgtctgtgccatctggtggtggt---gtggctgtttcagctg 226 Query: 79 ct 80 || Sbjct: 227 ct 228
>dbj|AK109195.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B08, full insert sequence Length = 1051 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 |||||||||||||||||| |||| |||||||| Sbjct: 957 gacgatgacatgggcttcggtctcttcgacta 988
>emb|X85180.1|CHRPP1 C.herbarum mRNA for ribosomal protein P1 Length = 595 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 349 ggagaaggaggagtccgacgacgacatgggcttcggtctcttcgacta 396
>emb|AJ224333.1|AFAJ4333 Aspergillus fumigatus mRNA for rAsp f 8 allergen Length = 336 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 288 ggagaaggaggagtccgacgaggacatgggcttcggtctcttcgacta 335
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 114686 gacgacgacatgggcttcggtctgttcgacta 114717
>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054 (D135)), complete sequence Length = 81053 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 59912 gacgacgacatgggcttcggtctgttcgacta 59943
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 |||||||||||||| ||||||||||| ||||| Sbjct: 1058 gacgatgacatgggtttcagtctgtttgacta 1089
>emb|Y00504.1|DMRP21C Drosophila melanogaster mRNA for A-type ribosomal protein rp21C Length = 526 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| ||||||||||||| Sbjct: 355 gacgacgacatgggcttcggtctgttcgacta 386
>ref|NM_124144.3| Arabidopsis thaliana structural constituent of ribosome AT5G47700 mRNA, complete cds Length = 675 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 315 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 374 Query: 110 tgc 112 ||| Sbjct: 375 tgc 377
>ref|NM_201820.1| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.3 mRNA, complete cds Length = 683 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 404 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 463 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 464 tgggtttcagtctattcga 482
>ref|NM_179775.1| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.2 mRNA, complete cds Length = 613 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 334 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 393 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 394 tgggtttcagtctattcga 412
>ref|NM_128330.2| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.1 mRNA, complete cds Length = 617 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 338 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 397 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 398 tgggtttcagtctattcga 416
>gb|DQ207857.1| Solanum tuberosum clone 078C02 unknown mRNA Length = 580 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 162 gatgacatgggcttcagtctgttcgactaga 192 |||||||||||||||||||| ||||| |||| Sbjct: 364 gatgacatgggcttcagtcttttcgattaga 394
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 148 aggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||| ||| ||||||| ||||||||||| ||||||||||||| Sbjct: 144173 aggaggagggcgacgacgacatgggctttggtctgttcgacta 144215 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 148 aggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||| ||| ||||||| ||||||||||| ||||||||||||| Sbjct: 143222 aggaggagggcgacgacgacatgggctttggtctgttcgacta 143264
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 121 caaagaaagaagagaaggtcgtggagaaggaagag 155 |||||||||| |||||||||| |||||||||||| Sbjct: 82898 caaagaaagaggagaaggtcgaagagaaggaagag 82932 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 15 gctgctggcagggagaagtttgctgcggttccatctggtggtggtgg 61 |||||||| ||||||||||||||| | || || || ||||||||||| Sbjct: 82792 gctgctggaagggagaagtttgcttctgtgccctcaggtggtggtgg 82838
>ref|XM_360515.1| Magnaporthe grisea 70-15 hypothetical protein (MG10827.4) partial mRNA Length = 330 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 144 gagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 283 gagaaggaggagtccgacgaggacatgggcttcggtctcttcgacta 329
>ref|XM_658231.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5719.2), mRNA Length = 330 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 144 gagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 283 gagaaggaggagtccgacgaggacatgggcttcggtctcttcgacta 329
>gb|DQ191633.1| Solanum tuberosum 60s acidic ribosomal protein-like protein mRNA, complete cds Length = 579 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 15 gctgctggcagggagaagtttgctgcggttccatctggtggtggtgg 61 |||||||||||||||||||| ||| | || || ||||||||||||| Sbjct: 210 gctgctggcagggagaagttggcttcagtacctgctggtggtggtgg 256 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgactaga 192 ||||||||||||||||| ||||| |||| Sbjct: 366 gacatgggcttcagtctcttcgattaga 393
>gb|AY096430.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P1 (At5g47700) mRNA, complete cds Length = 373 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 198 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 257 Query: 110 tgc 112 ||| Sbjct: 258 tgc 260
>gb|AY070049.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P1 (At5g47700) mRNA, complete cds Length = 596 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 271 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 330 Query: 110 tgc 112 ||| Sbjct: 331 tgc 333
>dbj|AB226279.1| Aspergillus oryzae cDNA, contig sequence: AoEST3140 Length = 834 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 144 gagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 381 gagaaggaggagtccgacgaggacatgggcttcggtcttttcgacta 427
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 144 gagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||| |||||| |||||||||||| |||| |||||||| Sbjct: 1228264 gagaaggaggagtccgacgaggacatgggcttcggtcttttcgacta 1228310
>gb|AY062854.1| Arabidopsis thaliana 60S acidic ribosomal protein P2 (At2g27710; F15K20.19) mRNA, complete cds Length = 565 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 337 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 396 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 397 tgggtttcagtctattcga 415
>gb|AF428429.1|AF428429 Arabidopsis thaliana At2g27710/F15K20.19 mRNA, complete cds Length = 583 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 334 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 393 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 394 tgggtttcagtctattcga 412
>ref|XM_571764.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1065 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 144 gagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||||||||||| ||||| |||||||||||| |||| |||||||| Sbjct: 934 gagaaggaagagtctgacgacgacatgggcttcggtctcttcgacta 980
>gb|BT006518.1| Arabidopsis thaliana At2g27710 gene, complete cds Length = 348 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 266 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 325 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 326 tgggtttcagtctattcga 344
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 121 caaagaaagaagagaaggtcgtggagaaggaagag 155 |||||||||| |||||||||| |||||||||||| Sbjct: 21691722 caaagaaagaggagaaggtcgaagagaaggaagag 21691756 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 15 gctgctggcagggagaagtttgctgcggttccatctggtggtggtgg 61 |||||||| ||||||||||||||| | || || || ||||||||||| Sbjct: 21691616 gctgctggaagggagaagtttgcttctgtgccctcaggtggtggtgg 21691662
>emb|BX820171.1|CNS0AA6T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZH02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 548 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 318 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 377 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 378 tgggtttcagtctattcga 396
>emb|BX821707.1|CNS0A88S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 404 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 463 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 464 tgggtttcagtctattcga 482
>emb|BX829474.1|CNS0A1FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 488 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 203 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 262 Query: 110 tgc 112 ||| Sbjct: 263 tgc 265
>emb|BX832269.1|CNS0A0Z2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 553 Score = 46.1 bits (23), Expect = 0.094 Identities = 50/59 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgccc 108 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| |||||||| Sbjct: 247 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccc 305
>emb|BX831816.1|CNS0A16C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 235 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 294 Query: 110 tgc 112 ||| Sbjct: 295 tgc 297
>emb|BX833376.1|CNS0A0I0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL4ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 612 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 249 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 308 Query: 110 tgc 112 ||| Sbjct: 309 tgc 311
>emb|BX841989.1|CNS09Y9W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 536 Score = 46.1 bits (23), Expect = 0.094 Identities = 65/79 (82%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaagagaaggtcgtggagaaggaagagagcgacgatgaca 168 |||| |||||||| ||||||||||||||| | || |||||||| ||| ||||||| Sbjct: 311 ctgctgctgagtccaagaaagaagagaagaaggaagaaaaggaagaatccgatgatgaca 370 Query: 169 tgggcttcagtctgttcga 187 |||| |||||||| ||||| Sbjct: 371 tgggtttcagtctattcga 389
>emb|BX841725.1|CNS09YL5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 235 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 294 Query: 110 tgc 112 ||| Sbjct: 295 tgc 297
>gb|AY085303.1| Arabidopsis thaliana clone 14401 mRNA, complete sequence Length = 676 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 316 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 375 Query: 110 tgc 112 ||| Sbjct: 376 tgc 378
>dbj|D21114.1|RICYK132 Oryza sativa mRNA for ribosomal protein A2, partial sequence Length = 344 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 15 gctgctggcagggagaagtttgctgcggttccatctggtggtggtgg 61 |||||||| ||||||||||||||| | || || || ||||||||||| Sbjct: 223 gctgctggaagggagaagtttgcttctgtgccctcaggtggtggtgg 269
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Minus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctgcccc 109 |||||| ||||| | | ||||| ||||||||||||| ||||||| |||| ||||||| | Sbjct: 5487 tggtggaggtggtgcgcctgttgcagctgctgctcctgctgctggcggtggtgctgccgc 5428 Query: 110 tgc 112 ||| Sbjct: 5427 tgc 5425
>gb|AF045249.1|AF045249 Leishmania peruviana acidic ribosomal protein P1 mRNA, complete cds Length = 628 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 148 aggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 |||| ||| |||| || |||||||||||| ||||||||||||| Sbjct: 306 aggaggagggcgatgacgacatgggcttcggtctgttcgacta 348
>emb|AJ278460.1|JRE278460 Juglans regia mRNA for 60S ribosomal protein (rib 60S) Length = 686 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 98 tgctgctgcccctgcagctgagtcaaagaaagaagagaa 136 ||||||||| ||||||||||| |||||||||| ||||| Sbjct: 338 tgctgctgctgctgcagctgagccaaagaaagaggagaa 376
>gb|AY561519.1| Danio rerio acidic ribosomal protein P1 (rplP1) mRNA, complete cds Length = 498 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgacta 190 |||||||||||| ||||||||||||| Sbjct: 410 gacatgggcttcggtctgttcgacta 435
>ref|XM_751300.1| Ustilago maydis 521 hypothetical protein (UM00246.1) partial mRNA Length = 627 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgacta 190 |||||||||||| ||||||||||||| Sbjct: 601 gacatgggcttcggtctgttcgacta 626
>gb|AY231791.1| Drosophila yakuba clone yak-em_RpP2 mRNA sequence Length = 336 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgac 188 ||||| |||||||||||| ||||||||||| Sbjct: 307 gacgacgacatgggcttcggtctgttcgac 336
>ref|XM_788931.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S acidic ribosomal protein P0 (L10E) (LOC589287), mRNA Length = 780 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgactag 191 ||||||||||||||| ||| |||| ||||||||| Sbjct: 450 cgacgatgacatgggtttcggtctcttcgactag 483
>gb|AC092815.2| Homo sapiens chromosome 1 clone RP5-1029K14, complete sequence Length = 126651 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 tgctggaggtgctgctgcccct 110 |||||||||||||||||||||| Sbjct: 64593 tgctggaggtgctgctgcccct 64614
>ref|NM_200029.1| Danio rerio ribosomal protein, large, P1 (rplp1), mRNA Length = 520 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgacta 190 |||||||||||| ||||||||||||| Sbjct: 434 gacatgggcttcggtctgttcgacta 459
>gb|AY072284.1| Spodoptera frugiperda 60S acidic ribosomal protein P0 mRNA, complete cds Length = 1062 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 153 gagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||| |||||||||||| |||| || ||||| Sbjct: 995 gagagcgacgacgacatgggcttcggtctttttgacta 1032
>dbj|AB180444.1| Plutella xylostella mRNA for 60S acidic ribosomal protein P2, complete cds Length = 522 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgactaga 192 ||||| |||||||||||| |||| |||||||||| Sbjct: 377 gacgaggacatgggcttcggtctcttcgactaga 410
>gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the complete genome Length = 13759 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 tggtggtggtggcgtggctgtt 71 |||||||||||||||||||||| Sbjct: 12576 tggtggtggtggcgtggctgtt 12555
>gb|AY161269.1| Leishmania donovani ribosomal protein P1-like protein mRNA, complete cds Length = 617 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 148 aggaagagagcgacgatgacatgggcttcagtctgttcgact 189 |||||||| ||||||| |||||||| || |||||||||||| Sbjct: 359 aggaagagggcgacgacgacatgggttttggtctgttcgact 400
>gb|BC062852.1| Danio rerio ribosomal protein, large, P1, mRNA (cDNA clone MGC:77776 IMAGE:7001140), complete cds Length = 520 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgacta 190 |||||||||||| ||||||||||||| Sbjct: 434 gacatgggcttcggtctgttcgacta 459
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 147 aaggaagagagcgacgatgacatgggcttcagtctgtt 184 ||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 37960 aaggaagagagtgacgatgatatgggattcagcctgtt 37923
>ref|NM_105867.2| Arabidopsis thaliana catalytic/ iron ion binding AT1G72090 mRNA, complete cds Length = 1976 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 agtcaaagaaagaagagaagg 138 ||||||||||||||||||||| Sbjct: 1685 agtcaaagaaagaagagaagg 1705
>ref|XM_473881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5496 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaaga 133 ||||||||||||||||||| ||||| Sbjct: 3929 ctgcagctgagtcaaagaacgaaga 3953
>gb|AY769268.1| Bombyx mori ribosomal protein P1 (RpP1) mRNA, complete cds Length = 537 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||||||||||| |||| || ||||| Sbjct: 387 cgacgatgacatgggcttcggtctctttgacta 419
>gb|AY769267.1| Bombyx mori ribosomal protein P0 (RpP0) mRNA, complete cds Length = 1201 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 148 aggaagagagcgacgatgacatgggcttcagtctgttcgactaga 192 ||||||| ||||| || ||||||||||| |||| |||||||||| Sbjct: 1040 aggaagaaagcgatgacgacatgggctttggtctcttcgactaga 1084
>gb|BT016538.1| Zea mays clone Contig371 mRNA sequence Length = 707 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgact 189 |||||||||||||| |||||||||| Sbjct: 395 gacatgggcttcagcctgttcgact 419
>gb|BT018010.1| Zea mays clone EL01N0528A08.c mRNA sequence Length = 654 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgact 189 |||||||||||||| |||||||||| Sbjct: 364 gacatgggcttcagcctgttcgact 388
>gb|U87960.1|RNU87960 Rattus norvegicus leukocyte common antigen receptor (LAR) gene, trans-spliced alternative untranslated exon Length = 2479 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 73 cagctgctgctccctctgctggaggtgctgctgcccctgcagctg 117 ||||||||||| | |||||| || ||| |||||||||||||||| Sbjct: 2162 cagctgctgctgctgctgctgcagctgcggctgcccctgcagctg 2118
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 cagctgctgctccctctgctg 93 ||||||||||||||||||||| Sbjct: 92258 cagctgctgctccctctgctg 92278
>ref|XM_362022.1| Magnaporthe grisea 70-15 hypothetical protein (MG04467.4) partial cds Length = 942 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| |||| |||||||| Sbjct: 909 cgacgaggacatgggcttcggtctcttcgacta 941
>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence Length = 366816 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tgcagtatctatctttggcca 232 ||||||||||||||||||||| Sbjct: 40688 tgcagtatctatctttggcca 40668
>emb|CR293498.12| Zebrafish DNA sequence from clone DKEY-5I16 in linkage group 23, complete sequence Length = 147189 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 136983 cagctgagtcaaagaaagaag 136963
>emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 in linkage group 14, complete sequence Length = 222032 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 176229 cagctgagtcaaagaaagaag 176209
>emb|AL935274.14| Zebrafish DNA sequence from clone CH211-249C2 in linkage group 4, complete sequence Length = 121896 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 41873 cagctgagtcaaagaaagaag 41893
>emb|CR812792.16| Zebrafish DNA sequence from clone DKEY-33J18 in linkage group 4, complete sequence Length = 123987 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 3993 cagctgagtcaaagaaagaag 4013
>emb|CR788308.9| Zebrafish DNA sequence from clone DKEY-192K19 in linkage group 3, complete sequence Length = 193615 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 ctttaacaatgcattgttatgatat 399 ||||||||||||||| ||||||||| Sbjct: 192378 ctttaacaatgcatttttatgatat 192354
>emb|CR391997.9| Zebrafish DNA sequence from clone CH211-236G14 in linkage group 17, complete sequence Length = 163437 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 71644 cagctgagtcaaagaaagaag 71664
>gb|AC015884.15| Homo sapiens chromosome 17, clone RP11-216P6, complete sequence Length = 207661 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 gaaccataccctttgttatcc 363 ||||||||||||||||||||| Sbjct: 25895 gaaccataccctttgttatcc 25915
>gb|AF548317.1| Branchiostoma belcheri ribosomal protein P2 mRNA, complete cds Length = 526 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| | ||||||||||| Sbjct: 367 cgacgaagacatgggcttcggactgttcgacta 399
>emb|BX649269.11| Zebrafish DNA sequence from clone CH211-195G14 in linkage group 13, complete sequence Length = 141533 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 93397 cagctgagtcaaagaaagaag 93377
>emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 in linkage group 8, complete sequence Length = 232595 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 60279 cagctgagtcaaagaaagaag 60259
>emb|CR382326.12| Zebrafish DNA sequence from clone DKEYP-50A7 in linkage group 14, complete sequence Length = 133943 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 17223 cagctgagtcaaagaaagaag 17243
>gb|AC154556.2| Mus musculus BAC clone RP23-423F3 from chromosome 14, complete sequence Length = 189092 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 123 aagaaagaagagaaggtcgtggagaaggaagag 155 ||||||||||||||||| | |||| |||||||| Sbjct: 176528 aagaaagaagagaaggtggaggaggaggaagag 176496
>gb|U97194.4| Caenorhabditis elegans cosmid C37A2, complete sequence Length = 27406 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| |||| |||||||| Sbjct: 14753 cgacgacgacatgggcttcggtctcttcgacta 14721
>emb|Z74696.1|HS203C2 Human DNA sequence from clone RP1-203C2 on chromosome X Contains the gene for actin-related protein T1 (ACTRT1), a novel pseudogene, a BTG family member 3 (BTG3) pseudodgene and a actin-related protein pseudogene, complete sequence Length = 150620 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tgctgctgcccctgcagctga 118 ||||||||||||||||||||| Sbjct: 138619 tgctgctgcccctgcagctga 138639
>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a cytochrome c oxidase subunit IV pseudogene, a novel gene, an aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene, a novel gene, similar to RIKEN cDNA 1700086N05 and CpG island, complete sequence Length = 112107 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 gctgctgctccctctgctgga 95 ||||||||||||||||||||| Sbjct: 41241 gctgctgctccctctgctgga 41261
>emb|BX510948.13| Zebrafish DNA sequence from clone DKEY-4E4 in linkage group 8, complete sequence Length = 124751 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 10786 cagctgagtcaaagaaagaag 10806
>emb|CR848001.13| Zebrafish DNA sequence from clone CH211-264G8 in linkage group 20, complete sequence Length = 96579 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 82580 cagctgagtcaaagaaagaag 82560
>emb|CR381619.9| Zebrafish DNA sequence from clone DKEY-1O2 in linkage group 5, complete sequence Length = 266753 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 206274 cagctgagtcaaagaaagaag 206294
>gb|AC159196.2| Mus musculus BAC clone RP23-430O17 from chromosome 13, complete sequence Length = 198595 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cagctgctgctccctctgctg 93 ||||||||||||||||||||| Sbjct: 27237 cagctgctgctccctctgctg 27217
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaaga 133 ||||||||||||||||||| ||||| Sbjct: 48810 ctgcagctgagtcaaagaacgaaga 48834
>emb|CR847859.13| Zebrafish DNA sequence from clone DKEYP-2F4 in linkage group 14, complete sequence Length = 124837 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 8784 cagctgagtcaaagaaagaag 8804
>emb|BX537277.15| Zebrafish DNA sequence from clone DKEY-45D16 in linkage group 2, complete sequence Length = 263014 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 102044 cagctgagtcaaagaaagaag 102024
>emb|BX276184.16| Zebrafish DNA sequence from clone CH211-236E20 in linkage group 17, complete sequence Length = 161442 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 65844 cagctgagtcaaagaaagaag 65824 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 27481 cagctgagtcaaagaaagaag 27501
>emb|BX890613.22| Zebrafish DNA sequence from clone DKEY-156K2 in linkage group 14, complete sequence Length = 209228 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 105845 cagctgagtcaaagaaagaag 105825
>emb|BX957251.3| Zebrafish DNA sequence from clone CH211-152L15 in linkage group 23, complete sequence Length = 120410 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 112398 cagctgagtcaaagaaagaag 112378
>emb|BX323594.6| Zebrafish DNA sequence from clone CH211-233H3 in linkage group 8, complete sequence Length = 23416 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 3699 cagctgagtcaaagaaagaag 3719
>emb|BX537137.13| Zebrafish DNA sequence from clone DKEYP-87D1 in linkage group 20 Contains two novel genes and two CpG islands, complete sequence Length = 200339 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 108859 cagctgagtcaaagaaagaag 108879
>emb|BX927404.7| Zebrafish DNA sequence from clone DKEY-18F7 in linkage group 19, complete sequence Length = 94279 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 52478 cagctgagtcaaagaaagaag 52498
>emb|BX511182.12| Zebrafish DNA sequence from clone DKEY-26H11 in linkage group 17, complete sequence Length = 155243 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 138009 cagctgagtcaaagaaagaag 137989 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 29789 cagctgagtcaaagaaagaag 29769
>emb|BX000701.25| Zebrafish DNA sequence from clone CH211-18I3 in linkage group 3, complete sequence Length = 181568 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 59625 cagctgagtcaaagaaagaag 59605
>emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 in linkage group 8, complete sequence Length = 198019 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 109035 cagctgagtcaaagaaagaag 109055
>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence Length = 171461 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tgctggaggtgctgctgcccc 109 ||||||||||||||||||||| Sbjct: 39666 tgctggaggtgctgctgcccc 39686
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 cctctgctggaggtgctgctg 105 ||||||||||||||||||||| Sbjct: 966045 cctctgctggaggtgctgctg 966025 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| || |||||||||| Sbjct: 8988 cgacgacgacatgggcttcggtttgttcgacta 9020
>gb|AC157594.4| Mus musculus BAC clone RP23-279A2 from chromosome 17, complete sequence Length = 220526 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ctgagtcaaagaaagaagaga 135 ||||||||||||||||||||| Sbjct: 184381 ctgagtcaaagaaagaagaga 184401
>emb|BX537290.9| Zebrafish DNA sequence from clone DKEY-89K1 in linkage group 5, complete sequence Length = 180630 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 33569 cagctgagtcaaagaaagaag 33589
>gb|AF367274.1|AF367274 Arabidopsis thaliana At1g72090/F28P5_4 mRNA, complete cds Length = 1977 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 agtcaaagaaagaagagaagg 138 ||||||||||||||||||||| Sbjct: 1685 agtcaaagaaagaagagaagg 1705
>ref|NM_059543.4| Caenorhabditis elegans C37A2.7 (C37A2.7) mRNA, complete cds Length = 430 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| |||| |||||||| Sbjct: 295 cgacgacgacatgggcttcggtctcttcgacta 327
>emb|AL116172.1|CNS01CZ8 Botrytis cinerea strain T4 cDNA library Length = 516 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 334 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 378
>emb|AL115473.1|CNS01CFT Botrytis cinerea strain T4 cDNA library Length = 554 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 319 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 363
>emb|AL115427.1|CNS01CEJ Botrytis cinerea strain T4 cDNA library Length = 420 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 228 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 272
>emb|AL115241.1|CNS01C9D Botrytis cinerea strain T4 cDNA library Length = 600 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 373 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 417
>emb|AL113803.1|CNS01B5F Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 333 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 377
>emb|AL113787.1|CNS01B4Z Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 310 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 354
>emb|AL112414.1|CNS01A2U Botrytis cinerea strain T4 cDNA library Length = 516 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 336 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 380
>emb|AL111591.1|CNS019FZ Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 323 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 367
>emb|AL111709.1|CNS019J9 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 332 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 376
>emb|AL110770.1|CNS018T7 Botrytis cinerea strain T4 cDNA library Length = 420 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 205 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 249
>emb|AL110713.1|CNS018RM Botrytis cinerea strain T4 cDNA library Length = 600 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcga 187 ||||||||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 376 ggagaaggaagagtccgacgaggacatgggtttcggtcttttcga 420
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 ctgcagctgagtcaaagaaagaaga 133 ||||||||||||||||||| ||||| Sbjct: 31227208 ctgcagctgagtcaaagaacgaaga 31227232
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cagctgctgctccctctgctg 93 ||||||||||||||||||||| Sbjct: 12411917 cagctgctgctccctctgctg 12411897
>gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosome 13, complete sequence Length = 189362 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 cagctgctgctccctctgctg 93 ||||||||||||||||||||| Sbjct: 18181 cagctgctgctccctctgctg 18201
>gb|AF280909.1|AF280909 Pongo pygmaeus clone 3804 chromosome Xq genomic sequence Length = 853 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tgctgctgcccctgcagctga 118 ||||||||||||||||||||| Sbjct: 451 tgctgctgcccctgcagctga 471
>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete sequence Length = 38629 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 agtcaaagaaagaagagaagg 138 ||||||||||||||||||||| Sbjct: 14806 agtcaaagaaagaagagaagg 14786
>gb|AY072285.1| Spodoptera frugiperda 60S acidic ribosomal protein P1 mRNA, complete cds Length = 520 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| |||| |||||||| Sbjct: 388 cgacgacgacatgggcttcggtctcttcgacta 420
>gb|BT002712.1| Arabidopsis thaliana At1g72090/F28P5_4 gene, complete cds Length = 1806 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 agtcaaagaaagaagagaagg 138 ||||||||||||||||||||| Sbjct: 1643 agtcaaagaaagaagagaagg 1663
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 138803 ggtcgtggagaaggaagagag 138823
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 40765 ggtcgtggagaaggaagagag 40785
>emb|AJ490511.1|BMO490511 Bombyx mori mRNA for acidic ribosomal protein P1 (rpP1 gene) Length = 339 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 ||||||||||||||||||| |||| || ||||| Sbjct: 306 cgacgatgacatgggcttcggtctctttgacta 338
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 120231 cagctgagtcaaagaaagaag 120251
>emb|AJ457827.1|BMO457827 Bombyx mori mRNA for ribosomal P0 protein (p0 gene) Length = 1151 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 148 aggaagagagcgacgatgacatgggcttcagtctgttcgactaga 192 ||||||| ||||| || ||||||||||| |||| |||||||||| Sbjct: 981 aggaagaaagcgatgacgacatgggctttggtctcttcgactaga 1025
>dbj|AB115749.1| Seriola quinqueradiata BRAF mRNA for serine/threonine protein kinase BRAF, partial cds Length = 2340 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cagctgctgctccctctgctg 93 ||||||||||||||||||||| Sbjct: 62 cagctgctgctccctctgctg 42
>emb|BX005442.10| Zebrafish DNA sequence from clone DKEY-88J15, complete sequence Length = 200176 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 155089 cagctgagtcaaagaaagaag 155069
>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence Length = 256446 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 53761 cagctgagtcaaagaaagaag 53741
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 78152 ggtcgtggagaaggaagagag 78132
>dbj|AK122126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132D02, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 184 ggtcgtggagaaggaagagag 204
>dbj|AK110702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-C03, full insert sequence Length = 1104 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| |||| |||||||| Sbjct: 964 cgacgaggacatgggcttcggtcttttcgacta 996
>ref|NM_210388.1| Eremothecium gossypii AER177Wp (AER177W), mRNA Length = 2376 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 cctctgctggaggtgctgctg 105 ||||||||||||||||||||| Sbjct: 1431 cctctgctggaggtgctgctg 1411
>ref|NM_209871.1| Eremothecium gossypii AEL342Wp (AEL342W), mRNA Length = 318 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| || |||||||||| Sbjct: 285 cgacgacgacatgggcttcggtttgttcgacta 317
>dbj|AK064779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B04, full insert sequence Length = 1479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 70 ggtcgtggagaaggaagagag 90
>emb|BX470217.15| Zebrafish DNA sequence from clone CH211-231P4 in linkage group 20, complete sequence Length = 119560 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 25400 cagctgagtcaaagaaagaag 25420
>dbj|AK061976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A03, full insert sequence Length = 1655 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggtcgtggagaaggaagagag 157 ||||||||||||||||||||| Sbjct: 69 ggtcgtggagaaggaagagag 89
>gb|AY849714.1| Magnaporthe grisea 60S acidic ribosomal protein-like protein mRNA, complete cds Length = 1436 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| |||| |||||||| Sbjct: 983 cgacgaggacatgggcttcggtctcttcgacta 1015
>emb|CT009563.15| Mouse DNA sequence from clone RP23-69I23 on chromosome 14, complete sequence Length = 68081 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 123 aagaaagaagagaaggtcgtggagaaggaagag 155 ||||||||||||||||| | |||| |||||||| Sbjct: 49313 aagaaagaagagaaggtggaggaggaggaagag 49281
>gb|AC006059.3|AC006059 Homo sapiens PAC RPCI4-613B23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 185161 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tgctggaggtgctgctgcccc 109 ||||||||||||||||||||| Sbjct: 56215 tgctggaggtgctgctgcccc 56235
>emb|AL845295.21| Zebrafish DNA sequence from clone DKEY-285E18 in linkage group 4, complete sequence Length = 162785 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 69818 cagctgagtcaaagaaagaag 69798
>gb|AY609630.1| Sus scrofa clone Clu_22066.scr.msk.p1.Contig2, mRNA sequence Length = 1621 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gtgctgctgcccctgcagctg 117 ||||||||||||||||||||| Sbjct: 73 gtgctgctgcccctgcagctg 93
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cagctgctgctccctctgctg 93 ||||||||||||||||||||| Sbjct: 12419257 cagctgctgctccctctgctg 12419237
>emb|BX005101.8| Zebrafish DNA sequence from clone CH211-139G10 in linkage group 20, complete sequence Length = 160724 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cagctgagtcaaagaaagaag 132 ||||||||||||||||||||| Sbjct: 113802 cagctgagtcaaagaaagaag 113782
>gb|AC151411.2| Mus musculus BAC clone RP24-363M23 from 17, complete sequence Length = 173264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ctgagtcaaagaaagaagaga 135 ||||||||||||||||||||| Sbjct: 111607 ctgagtcaaagaaagaagaga 111627
>gb|AC121770.3| Mus musculus BAC clone RP23-341M16 from 17, complete sequence Length = 186190 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ctgagtcaaagaaagaagaga 135 ||||||||||||||||||||| Sbjct: 45893 ctgagtcaaagaaagaagaga 45873
>gb|U62752.1|ZMU62752 Zea mays acidic ribosomal protein P1a (rpp1a) mRNA, complete cds Length = 573 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgact 189 |||||||||||||| |||||||||| Sbjct: 335 gacatgggcttcagcctgttcgact 359
>gb|U40147.1|ZMU40147 Zea mays ribosomal protein L12 mRNA, complete cds Length = 530 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gacatgggcttcagtctgttcgact 189 |||||||||||||| |||||||||| Sbjct: 370 gacatgggcttcagcctgttcgact 394
>emb|Z83263.1|BFZ83263 B.floridae mRNA for AmphiP2 Length = 515 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtctgttcgacta 190 |||||| |||||||||||| | ||||||||||| Sbjct: 361 cgacgacgacatgggcttcggactgttcgacta 393
>ref|NM_127390.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT2G18330 mRNA, complete cds Length = 2273 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tgctgctgcccctgcagctg 117 |||||||||||||||||||| Sbjct: 1213 tgctgctgcccctgcagctg 1194
>gb|DQ235177.1| Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds Length = 567 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 99 gctgctgcccctgcagctgagtcaaagaaagaagag 134 |||||||||||||| |||||| |||||| |||||| Sbjct: 314 gctgctgcccctgctgctgaggaaaagaaggaagag 349
>gb|AC161363.7| Mus musculus BAC clone RP24-554L15 from chromosome 6, complete sequence Length = 209193 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gagtcaaagaaagaagagaa 136 |||||||||||||||||||| Sbjct: 17216 gagtcaaagaaagaagagaa 17197
>gb|AY769269.1| Bombyx mori ribosomal protein P2 (RpP2) mRNA, complete cds Length = 524 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 |||||||||||||||||| |||| || ||||| Sbjct: 376 gacgatgacatgggcttcggtctctttgacta 407
>gb|AC124332.9| Mus musculus chromosome 1, clone RP24-497F17, complete sequence Length = 181313 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 attcagcctctggttgctgg 329 |||||||||||||||||||| Sbjct: 5734 attcagcctctggttgctgg 5753
>ref|XM_368802.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00442.4) partial mRNA Length = 1110 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ggtggtggtggcgtggctgt 70 |||||||||||||||||||| Sbjct: 928 ggtggtggtggcgtggctgt 947
>ref|XM_658508.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5996.2), mRNA Length = 330 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| ||| || |||||||||||| |||| |||||||| Sbjct: 282 ggagaaggaggagtccgatgaggacatgggcttcggtctcttcgacta 329
>gb|AY495648.1| Cochliobolus heterostrophus polyketide synthase (PKS7) gene, complete cds Length = 9467 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccatctggtggtggtggcgt 64 |||||||||||||||||||| Sbjct: 9119 ccatctggtggtggtggcgt 9100
>ref|XM_757109.1| Ustilago maydis 521 hypothetical protein (UM06055.1) partial mRNA Length = 942 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| |||| |||||||| Sbjct: 910 gacgacgacatgggcttcggtctcttcgacta 941
>ref|XM_748034.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g17610) partial mRNA Length = 915 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctctgctggaggtgctgc 103 |||||||||||||||||||| Sbjct: 326 ccctctgctggaggtgctgc 307
>ref|XM_566980.1| Cryptococcus neoformans var. neoformans JEC21 PRCDNA35 (CNA06350) partial mRNA Length = 471 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| |||| |||||||| Sbjct: 344 gacgacgacatgggcttcggtctcttcgacta 375
>ref|XM_571539.1| Cryptococcus neoformans var. neoformans JEC21 ribosomal protein P2 (CNF02150) partial mRNA Length = 663 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||| |||||||||||| |||| |||||||| Sbjct: 360 gacgacgacatgggcttcggtctcttcgacta 391
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence Length = 164612 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 50 tggtggtggtggcgtggctgtttcagctgctgctccctctgctggaggtgctgctg 105 |||||||||||| || |||| | | ||||||||| | ||||||| |||||||||| Sbjct: 92221 tggtggtggtggtgttgctgctgctgctgctgctgctgctgctggtggtgctgctg 92166
>ref|XM_538699.2| PREDICTED: Canis familiaris similar to topoisomerase I binding, arginine/serine-rich (LOC481577), mRNA Length = 3679 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 agtcaaagaaagaagagaag 137 |||||||||||||||||||| Sbjct: 1586 agtcaaagaaagaagagaag 1605
>ref|XM_800089.1| Trypanosoma cruzi strain CL Brener 60S acidic ribosomal protein P2 (Tc00.1047053505977.26) partial mRNA Length = 339 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 ||||||||||||||||| ||||||| ||||| Sbjct: 307 gacgatgacatgggctttggtctgtttgacta 338
>gb|AF548329.1| Branchiostoma belcheri ribosomal protein P1 mRNA, complete cds Length = 546 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 150 gaagagagcgacgatgacatgggcttcagtctgttcgactagat 193 |||||||| || || |||||||| ||| | |||||||||||||| Sbjct: 465 gaagagagtgatgacgacatgggattcggactgttcgactagat 508
>ref|XM_730160.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301604.00.0) partial mRNA Length = 480 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 71 ttcagctgctgctccctctgctggaggtgctgctgc 106 ||||||||||||| | |||||||||| | ||||||| Sbjct: 471 ttcagctgctgcttcttctgctggagcttctgctgc 436
>ref|XM_739294.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000291.05.0) partial mRNA Length = 522 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 71 ttcagctgctgctccctctgctggaggtgctgctgc 106 ||||||||||||| | |||||||||| | ||||||| Sbjct: 471 ttcagctgctgcttcttctgctggagcttctgctgc 436
>emb|CR633168.2|CNS0ENIU Tetraodon nigroviridis full-length cDNA Length = 520 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cgacgatgacatgggcttcagtct 181 |||||||||||||||||| ||||| Sbjct: 444 cgacgatgacatgggctttagtct 467
>emb|AL357503.12| Human DNA sequence from clone RP5-899C14 on chromosome 20 Contains the 3' end of the C20orf101 gene, complete sequence Length = 133288 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gtaattcagcctctggttgc 326 |||||||||||||||||||| Sbjct: 84509 gtaattcagcctctggttgc 84528
>emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chromosome 13 Contains a high-mobility group pseudogene, complete sequence Length = 162763 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tcaaagaaagaagagaaggt 139 |||||||||||||||||||| Sbjct: 60690 tcaaagaaagaagagaaggt 60709
>emb|BX026590.1|CNS08SOI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4DF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 824 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 atgggcttcagtctgttcgactagatgc 195 ||||||||| ||||||||||||| |||| Sbjct: 61 atgggcttcggtctgttcgactaaatgc 34
>emb|X99708.1|ASNIRORF Anabaena sp. nir gene and orfs 136 & 398 Length = 2536 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tagatgcttgggtatcttgt 208 |||||||||||||||||||| Sbjct: 1835 tagatgcttgggtatcttgt 1816
>gb|AY786077.1| Penicillium brevicompactum 60S acidic ribosomal P1 phosphoprotein Pen b 26 (Pen b 26) mRNA, complete cds Length = 324 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 143 ggagaaggaagagagcgacgatgacatgggcttcagtctgttcgacta 190 ||||||||| ||| ||| || |||||||||||| |||| |||||||| Sbjct: 276 ggagaaggaggagtccgatgaggacatgggcttcggtctcttcgacta 323
>emb|AL603834.6| Mouse DNA sequence from clone RP23-113D4 on chromosome 11 Contains the Rpa1 gene for replication protein A1, the 5' end of a novel gene and a CpG island, complete sequence Length = 67911 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 agctgctgctccctctgctggagg 97 |||||||||||| ||||||||||| Sbjct: 26397 agctgctgctccttctgctggagg 26420
>gb|AC161408.4| Mus musculus chromosome 1, clone RP24-329G10, complete sequence Length = 154449 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 attcagcctctggttgctgg 329 |||||||||||||||||||| Sbjct: 92690 attcagcctctggttgctgg 92709
>gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, complete sequence Length = 173189 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tgagtcaaagaaagaagagaaggt 139 ||||||||||| |||||||||||| Sbjct: 168246 tgagtcaaagagagaagagaaggt 168223
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||||| ||| ||||||||||||| Sbjct: 185969 gacgatgatatgggtttcggtctgttcgacta 185938
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||||| ||| ||||||||||||| Sbjct: 140213 gacgatgatatgggtttcggtctgttcgacta 140244
>gb|AY093265.1| Arabidopsis thaliana putative AAA-type ATPase (At2g18330) mRNA, complete cds Length = 1947 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tgctgctgcccctgcagctg 117 |||||||||||||||||||| Sbjct: 1041 tgctgctgcccctgcagctg 1022
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete sequence Length = 92861 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tgctgctgcccctgcagctg 117 |||||||||||||||||||| Sbjct: 47777 tgctgctgcccctgcagctg 47796
>ref|NM_079487.2| Drosophila melanogaster Ribosomal protein LP0 CG7490-RA (RpLP0), mRNA Length = 1262 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||||| ||| ||||||||||||| Sbjct: 1057 gacgatgatatgggtttcggtctgttcgacta 1088
>gb|AC079824.25| Homo sapiens Xp BAC RP11-750F16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119386 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gctgtttcagctgctgctcc 85 |||||||||||||||||||| Sbjct: 56525 gctgtttcagctgctgctcc 56544
>gb|AY075528.1| Drosophila melanogaster RE74511 full length cDNA Length = 1277 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gacgatgacatgggcttcagtctgttcgacta 190 |||||||| ||||| ||| ||||||||||||| Sbjct: 1057 gacgatgatatgggtttcggtctgttcgacta 1088
>gb|DQ275654.1| HIV-1 isolate 03ZAPS086MB1 from South Africa gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds Length = 9086 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gctgctgctccctctgctgg 94 |||||||||||||||||||| Sbjct: 8331 gctgctgctccctctgctgg 8312
>emb|AJ534439.1|TBA534439 Timarcha balearica mRNA for 60S acidic ribosomal protein P0 (rpP0 gene) Length = 1106 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 162 gatgacatgggcttcagtctgttcgactagat 193 ||||||||||| |||||||| || |||||||| Sbjct: 1010 gatgacatgggtttcagtctttttgactagat 1041 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,445,212 Number of Sequences: 3902068 Number of extensions: 5445212 Number of successful extensions: 133572 Number of sequences better than 10.0: 272 Number of HSP's better than 10.0 without gapping: 274 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132509 Number of HSP's gapped (non-prelim): 1052 length of query: 431 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 409 effective length of database: 17,147,199,772 effective search space: 7013204706748 effective search space used: 7013204706748 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)