ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3p21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 258 bits (130), Expect = 2e-65 Identities = 161/170 (94%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactaca 102 ||||||||| |||||||| ||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 93724 tatagtactccctccgttcctaaatataagtcttttaagcgatttcactaagggattaca 93783 Query: 103 tacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagt 162 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 93784 tacagagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacgtagt 93843 Query: 163 cctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 93844 cctctagtgcaatctctaaaaagacttatattat-ggaacggagggagta 93892 Score = 176 bits (89), Expect = 5e-41 Identities = 141/157 (89%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 56 ccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaat 115 ||||| ||||||||||||||||||||||||||| ||| | | |||||||| ||||||||| Sbjct: 67793 ccgttcctaaatataagtcttttaagcgatttcactatatgtctacatacgaagcaaaat 67852 Query: 116 gagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaat 175 || ||||| ||||||||||| ||||||||||||||||||||| | |||| |||||| ||| Sbjct: 67853 gattgaatgtacactctaaaatatgtctatatacatccgtatatggtccactagtgaaat 67912 Query: 176 ctctaaaaagacttatattatgggaacggagggagta 212 ||||| ||||||||||||| | ||||||||||||||| Sbjct: 67913 ctctacaaagacttatatt-taggaacggagggagta 67948 Score = 111 bits (56), Expect = 3e-21 Identities = 121/140 (86%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 55 tccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaa 114 |||||| ||||||||||||||||| || |||| ||| ||| |||||||| || |||| Sbjct: 4740 tccgttcctaaatataagtctttttagagattctactagagg-ctacatacggagaaaaa 4798 Query: 115 tgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaa 174 ||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||||| Sbjct: 4799 tgagtgagcctacactctaaggtatgtatatatacatccgtatgtagtcc-gtagtggaa 4857 Query: 175 tctctaaaaagacttatatt 194 ||||| ||||||||||||| Sbjct: 4858 cctctacaaagacttatatt 4877 Score = 107 bits (54), Expect = 4e-20 Identities = 139/166 (83%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| ||||||| ||||||||||||||||||| |||| ||| | | | |||||| Sbjct: 55558 tactccctccgtacctaaatataagtcttttaaaatattttactagatgtccacatacgg 55617 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 || ||||||| |||||||| | | ||||||||||||||||||||||||||||||| | | Sbjct: 55618 agtaaaatgaatgaatctatattttaaagtatgtctatatacatccgtatgtagttcatt 55677 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagtaa 213 ||| ||| ||||| ||||||||||||| | |||||||||||||||| Sbjct: 55678 agttgaacctctagaaagacttatatt-taggaacggagggagtaa 55722 Score = 67.9 bits (34), Expect = 3e-08 Identities = 57/62 (91%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||| |||||||| ||||||||||||||||||||||| | |||||||| |||| Sbjct: 4792 tccgtatgtag-cctctagtagaatctctaaaaagacttatatt-taggaacggatggag 4735 Query: 211 ta 212 || Sbjct: 4734 ta 4733 Score = 46.1 bits (23), Expect = 0.13 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 154 gtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||| ||| ||||| |||| || |||||||||||||| | ||||||||||||||| Sbjct: 93786 gtatgtaatcccttagtgaaatcgcttaaaagacttatatt-taggaacggagggagta 93729 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 |||| |||||||| |||||||||||||||| Sbjct: 67948 tactccctccgttcctaaatataagtcttt 67919 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 |||| |||||||| |||||||||||||||| Sbjct: 55721 tactccctccgttcctaaatataagtcttt 55692 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactac 101 ||||| |||| |||||||| | |||||||||||||| || |||| | ||| |||||||| Sbjct: 93898 atatactactccctccgttccataatataagtctttttagagattgcactagaggactac 93839
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 258 bits (130), Expect = 2e-65 Identities = 161/170 (94%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactaca 102 ||||||||| |||||||| ||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 2185 tatagtactccctccgttcctaaatataagtcttttaagcgatttcactaagggattaca 2126 Query: 103 tacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagt 162 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2125 tacagagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacgtagt 2066 Query: 163 cctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 2065 cctctagtgcaatctctaaaaagacttatattat-ggaacggagggagta 2017 Score = 46.1 bits (23), Expect = 0.13 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 154 gtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||| ||| ||||| |||| || |||||||||||||| | ||||||||||||||| Sbjct: 2123 gtatgtaatcccttagtgaaatcgcttaaaagacttatatt-taggaacggagggagta 2180 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactac 101 ||||| |||| |||||||| | |||||||||||||| || |||| | ||| |||||||| Sbjct: 2011 atatactactccctccgttccataatataagtctttttagagattgcactagaggactac 2070
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 232 bits (117), Expect = 1e-57 Identities = 154/165 (93%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 12669 tactccctccgttcctaaatataagtcttttaagcgatttcactaagagactacatacgg 12728 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 12729 agcaaaatgagtgaatctacactttaaaatatgtctatatacatccgtatgtagtcctct 12788 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 12789 agtgaaatctctaaaaagacttatattat-ggaacggagggagta 12832 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||| |||||||| | |||||||||||||| || |||||| ||| |||||||||||| Sbjct: 12832 tactccctccgttccataatataagtctttttagagatttcactagaggactacatac 12775 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||||| ||||| |||| || |||||||||||||| | ||||||||||||| Sbjct: 12729 tccgtatgtagtctcttagtgaaatcgcttaaaagacttatatt-taggaacggagggag 12671 Query: 211 ta 212 || Sbjct: 12670 ta 12669
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 218 bits (110), Expect = 2e-53 Identities = 153/166 (92%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacataca 106 |||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 14654 gtacttcctccgttcctaaatataagtcttttaagcaatttcactaaaggtctacatacg 14595 Query: 107 aagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctc 166 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 14594 gagcaaaatgattgaatctatactctaaagtatgtctatatacatccgtatgtagtccac 14535 Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| |||||||| ||||||||||||| | ||||||||||||||| Sbjct: 14534 tagtgaaatctctacaaagacttatatt-taggaacggagggagta 14490 Score = 200 bits (101), Expect = 4e-48 Identities = 150/165 (90%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||||||||||||||||||| |||| || ||||||| Sbjct: 89143 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacatatgg 89202 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 89203 agcaaaatgattgaatctatactctaaagtatgtctatatacatccgtatgtagtccact 89262 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| |||||||| ||||||||||||| | ||||||||||||||| Sbjct: 89263 agtgaaatctctagaaagacttatatt-taggaacggagggagta 89306 Score = 131 bits (66), Expect = 3e-27 Identities = 143/166 (86%), Gaps = 2/166 (1%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||||||||| || |||| ||||||| |||||||| Sbjct: 81136 tactccctccgttcctaaatataagtctttttagaaattttactaaagggctacatacgg 81195 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcc-tc 166 |||||||| | |||||||| ||| ||||||||| ||||||||||||||||||||||| | Sbjct: 81196 agcaaaataaatgaatctatactttaaagtatgcctatatacatccgtatgtagtccatt 81255 Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| || |||| |||||||||||||| | |||||||||| |||| Sbjct: 81256 tagtgaaacctcttaaaagacttatatt-taggaacggaggaagta 81300 Score = 95.6 bits (48), Expect = 2e-16 Identities = 139/168 (82%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacata 104 ||||||| ||| ||||| ||||||||||| |||| |||||| || |||||| |||| Sbjct: 83631 tagtactcccttcgtttttaaatataagttttttttaagatttcattagaggactgcata 83572 Query: 105 caaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcc 164 | || ||||||||||||||||||||||| | |||||||| ||||||| ||| || ||| Sbjct: 83571 cggagtaaaatgagtgaatctacactctagaatatgtctacatacatctatatataatcc 83512 Query: 165 tctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||| | |||||||||||||||||||||| | ||||||||| ||||| Sbjct: 83511 cttagcgaaatctctaaaaagacttatatt-taggaacggagagagta 83465 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/117 (84%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||| |||| | ||| |||| ||| |||||||||| Sbjct: 66720 gactacatacggagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgt 66661 Query: 156 atgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||| | ||||| |||||||||| | |||||||| | ||||||||||||||| Sbjct: 66660 atgtagt-ttatagtgagatctctaaaaggtcttatatt-taggaacggagggagta 66606 Score = 69.9 bits (35), Expect = 9e-09 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaa-ggactacatac 105 ||||||||||||| |||||||||||||||||||| | |||| ||||| ||||||||||| Sbjct: 81300 tacttcctccgttcctaaatataagtcttttaagaggtttcactaaatggactacatac 81242 Score = 60.0 bits (30), Expect = 8e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||| ||| |||| ||| |||||||||||||||||| | ||||||||||||| Sbjct: 81196 tccgtatgtagccctttagtaaaatttctaaaaagacttatatt-taggaacggagggag 81138 Query: 211 ta 212 || Sbjct: 81137 ta 81136 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 ||||| |||||||| |||||||||||||||| || |||||| ||| ||||||||||| Sbjct: 89307 gtactccctccgttcctaaatataagtctttctagagatttcactagtggactacatac 89249 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||| |||||||| |||||||||||||||| || |||||| ||| ||||||||||| Sbjct: 14490 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatac 14547 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtcttttaagcgatttctctaa 93 ||||||| ||||||| ||||||||||||||||| || |||||| |||| Sbjct: 83462 tagtactctctccgttcctaaatataagtctttttagagatttcgctaa 83510 Score = 44.1 bits (22), Expect = 0.50 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| |||| || |||||||||||||| | ||||||||||||||| Sbjct: 89187 tagtgaaatcgcttaaaagacttatatt-taggaacggagggagta 89143 Score = 44.1 bits (22), Expect = 0.50 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||| ||| ||||| ||| || |||||||||||||| | |||||||||| || Sbjct: 14593 tccgtatgtagacctttagtgaaattgcttaaaagacttatatt-taggaacggaggaag 14651 Query: 211 ta 212 || Sbjct: 14652 ta 14653
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 208 bits (105), Expect = 1e-50 Identities = 151/165 (91%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| |||||||||||||||||||| ||||| ||| | ||||| |||||| Sbjct: 1823 tactccctccgttcctaaatataagtcttttaagatatttcactagatgactaaatacaa 1764 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 1763 agcaaaatgagtgaatatacactctaaagtatgtctacatacatccgtatgtagtcctat 1704 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||| ||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1703 agtagaatctctagaaagacttatattat-ggaacggagggagta 1660 Score = 54.0 bits (27), Expect = 5e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 154 gtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| ||||| ||||||| ||| ||| |||||||||||||| | ||||||||||||||| Sbjct: 1766 gtatttagtcatctagtgaaatatcttaaaagacttatatt-taggaacggagggagta 1823
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 178 bits (90), Expect = 1e-41 Identities = 137/150 (91%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 63 taaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaatgagtgaa 122 |||||||||||||||||||||||||| || |||||||||||| ||||| || |||| Sbjct: 6346 taaatataagtcttttaagcgatttcatcaagaaactacatacaaaacaaaaagaatgaa 6287 Query: 123 tctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctctaaa 182 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 6286 tctacactctaaagtatgtctatatacatccgtatgtagtcct-tagtgaaatctctaaa 6228 Query: 183 aagacttatattatgggaacggagggagta 212 | |||||||||||| ||||||||||||||| Sbjct: 6227 atgacttatattat-ggaacggagggagta 6199
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 176 bits (89), Expect = 5e-41 Identities = 147/165 (89%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| |||||||||||||||||||| |||||| |||| || ||||||| | Sbjct: 47280 tactccctccgttcctaaatataagtcttttaagagatttcactaagggtttacatacga 47339 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 || |||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |||| Sbjct: 47340 agtaaaatgagtgaatcaacactttaaagtatgtctatatacatctgtatgtagttctct 47399 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| || ||||||||||||||||||| | |||||||||||||| Sbjct: 47400 agtgaaacctctaaaaagacttatatt-tacgaacggagggagta 47443 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgt 159 ||||||||||||||||||||| ||||| |||| ||| |||||||||||||| Sbjct: 61111 agcaaaatgagtgaatctacatcctaaaatatgactacatacatccgtatgt 61060 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| ||||||| |||||||||||||| | ||||||||||||||| Sbjct: 47324 tagtgaaatctcttaaaagacttatatt-taggaacggagggagta 47280 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||||| |||||||| |||||||||||||||| || | |||| ||| || ||||||||| Sbjct: 47445 agtactccctccgttcgtaaatataagtctttttagaggtttcactagagaactacatac 47386 Query: 106 a 106 | Sbjct: 47385 a 47385
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 172 bits (87), Expect = 8e-40 Identities = 132/147 (89%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| |||||||||||||||||||| ||||| |||| |||||||||||| Sbjct: 91844 tactccctccgttcctaaatataagtcttttaagaaatttcactaagagactacatacaa 91785 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||||||||| || | | ||||||||||||| |||||||||||||||||||| | Sbjct: 91784 agcaaaatgagtgaatatatattttaaagtatgtctaaatacatccgtatgtagtcctat 91725 Query: 168 agtggaatctctaaaaagacttatatt 194 |||| || ||||||||||||||||||| Sbjct: 91724 agtgaaacctctaaaaagacttatatt 91698 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 98 ctacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtat 157 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 85348 ctacatacgaagcaaaatgagtaaatctacactctaaagtatgtctatatacatccgtat 85289 Query: 158 gtag 161 |||| Sbjct: 85288 gtag 85285 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 56 ccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 ||||| ||||||||||||||||| || | |||| ||| |||||||||||| Sbjct: 91689 ccgttcctaaatataagtctttttagaggtttcactataggactacatac 91738 Score = 46.1 bits (23), Expect = 0.13 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 154 gtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||| ||||| ||| ||| |||||||||||||| | ||||||||||||||| Sbjct: 91787 gtatgtagtctcttagtgaaatttcttaaaagacttatatt-taggaacggagggagta 91844 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 119 tgaatctacactctaaagtatgtctatatacatccgtatgtagtcct 165 ||||| || ||| |||| ||| ||||||||||| ||||||||||||| Sbjct: 18721 tgaatttatactttaaaatatatctatatacattcgtatgtagtcct 18767 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 134 aagtatgtctatatacatccgtatgtagtcctctagtggaatctctaaaa 183 |||||||| ||| |||||||| ||||| | | |||||| ||||||||||| Sbjct: 74287 aagtatgtttatgtacatccgaatgtaattcactagtgaaatctctaaaa 74238 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatatt 194 ||||||||| | ||||||| ||| | |||||||||||||||| Sbjct: 18709 cgtatgtagacttctagtgaaatttttaaaaagacttatatt 18668
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 172 bits (87), Expect = 8e-40 Identities = 144/159 (90%), Gaps = 3/159 (1%) Strand = Plus / Minus Query: 54 ctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaa 113 ||||||| ||||||||||||||||| || |||| | ||| ||||||||||||||||||| Sbjct: 7568 ctccgttcctaaatataagtctttttagagattacactat-ggactacatacaaagcaaa 7510 Query: 114 atgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgga 173 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 7509 atgagtgcatctacactctaaagtatgtctatatacatccgtatgtagttc-gtagtgga 7451 Query: 174 atctctaaaaagacttatattatgggaacggagggagta 212 |||||||||||||| |||||| | |||| |||||||||| Sbjct: 7450 atctctaaaaagacctatatt-taggaatggagggagta 7413 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/59 (89%), Gaps = 2/59 (3%) Strand = Plus / Plus Query: 154 gtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||| Sbjct: 7518 gtatgtagtcca-tagtgtaatctctaaaaagacttatatt-taggaacggagtgagta 7574
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 168 bits (85), Expect = 1e-38 Identities = 146/165 (88%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||||||||| || |||||| ||| | |||||||||| Sbjct: 76975 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 76916 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||||||| | |||||| |||||||||||||||||| |||||||| || Sbjct: 76915 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctact 76856 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| || ||||||||||||||||||| | ||||||||||||||| Sbjct: 76855 agtgaaacctctaaaaagacttatatt-taggaacggagggagta 76812 Score = 147 bits (74), Expect = 5e-32 Identities = 138/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 55 tccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaa 114 ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| Sbjct: 29990 tccgtttctaaatataagtcttttaagcgattttactaagaatctacatacggagcaaaa 29931 Query: 115 tgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaa 174 ||| ||||||||||||||||| ||||||||||| ||||| |||||||| | ||||| || Sbjct: 29930 tgattgaatctacactctaaaatatgtctatatgcatccatatgtagttcactagtaaaa 29871 Query: 175 tctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||||||||||| | | ||||||||||||| Sbjct: 29870 cctctaaaaagacttatatt-tagaaacggagggagta 29834 Score = 75.8 bits (38), Expect = 1e-10 Identities = 57/62 (91%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||||| ||||| | |||||||||||||||||||||| | ||||||||||||| Sbjct: 76915 tccgtatgtagtcgtctagcgaaatctctaaaaagacttatatt-taggaacggagggag 76973 Query: 211 ta 212 || Sbjct: 76974 ta 76975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagt 162 |||||||||| ||||| || ||| |||| ||||||||| |||||||||||||||| Sbjct: 23153 agcaaaatgaatgaatatatactttaaaatatgtctatgtacatccgtatgtagt 23099 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtctttt 78 |||| |||||||||||||||||||||||||| Sbjct: 29834 tactccctccgtttctaaatataagtctttt 29864 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtctttt 78 ||||| |||||||| ||||||||||||||||| Sbjct: 76811 gtactccctccgttcctaaatataagtctttt 76842 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataag 72 ||||| |||||||||||||||||||| Sbjct: 23050 gtactccctccgtttctaaatataag 23075
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 167 bits (84), Expect = 5e-38 Identities = 148/167 (88%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| ||||||||||||||||||||||||||||| |||||| | || | |||||||| | Sbjct: 251 tactccctccgtttctaaatataagtcttttaagagatttcaccaagagtctacatacga 310 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtc--tatatacatccgtatgtagtcct 165 |||||||||| ||||||| |||| ||||||||||| |||||| |||||||||||||| Sbjct: 311 agcaaaatgaatgaatctgcactttaaagtatgtctatatatatatccgtatgtagtcta 370 Query: 166 ctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||||||| ||||||||||||| | ||||||||||||||| Sbjct: 371 ctagtggaatctctagaaagacttatatt-taggaacggagggagta 416 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttt 77 ||||| |||||||| |||||||||||||||| Sbjct: 417 gtactccctccgttcctaaatataagtcttt 387 Score = 40.1 bits (20), Expect = 7.8 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 173 aatctctaaaaagacttatattatgggaacggagggagta 212 ||||||| |||||||||||||| | | ||||||||||||| Sbjct: 289 aatctcttaaaagacttatatt-tagaaacggagggagta 251
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 153 bits (77), Expect = 8e-34 Identities = 141/161 (87%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 53 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 112 |||||||| ||||||||||||||||| || ||||| || |||||||||||| |||||| Sbjct: 71696 cctccgttcctaaatataagtctttttagacatttcaatagaggactacatacgaagcaa 71755 Query: 113 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 172 ||||||||||| || || |||| |||||||||||||||||||||||||| | ||||| Sbjct: 71756 aatgagtgaattcacgctttaaaatatgtctatatacatccgtatgtagttcaatagtga 71815 Query: 173 aatctctaaaaagacttatattatgggaacggagggagtaa 213 |||||||| ||||||||||||| | |||||||||||||||| Sbjct: 71816 aatctctagaaagacttatatt-taggaacggagggagtaa 71855 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||||||||||||||||||| |||| || |||||| | Sbjct: 73866 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattcgg 73925 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatat 147 |||||||||| |||||||| |||||||||||||||||||| Sbjct: 73926 agcaaaatgattgaatctatactctaaagtatgtctatat 73965 Score = 93.7 bits (47), Expect = 6e-16 Identities = 66/71 (92%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 142 ctatatacatccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaa 201 ||||||||||||||||||||||| |||||| |||||||| ||||||||||||| | |||| Sbjct: 90825 ctatatacatccgtatgtagtccactagtgaaatctctacaaagacttatatt-taggaa 90883 Query: 202 cggagggagta 212 ||||||||||| Sbjct: 90884 cggagggagta 90894 Score = 63.9 bits (32), Expect = 5e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggaggg 208 |||||||||||||||| || ||| |||||||||||||||||| | ||||||||||| Sbjct: 71749 cgtatgtagtcctctattgaaatgtctaaaaagacttatatt-taggaacggaggg 71695 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||||| |||||||| |||||||||||||||| || |||||| ||| ||||||||||| Sbjct: 90896 agtactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatac 90837 Score = 44.1 bits (22), Expect = 0.50 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| |||| || |||||||||||||| | ||||||||||||||| Sbjct: 73910 tagtgaaatcgcttaaaagacttatatt-taggaacggagggagta 73866 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 |||| |||||||| |||||||||||||||| Sbjct: 71854 tactccctccgttcctaaatataagtcttt 71825
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 145 bits (73), Expect = 2e-31 Identities = 143/165 (86%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| |||||||||||||||||||| ||||| |||| | ||||||||| Sbjct: 23274 tactccctccgttcctaaatataagtcttttaaggaatttcactaatgatctacatacag 23333 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||||||||| |||||| ||||| ||||||||| |||||||||| | | Sbjct: 23334 agcaaaatgagtgaatctacattctaaaatatgtttatatacattcgtatgtagttcatt 23393 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| ||||| || ||||||||||||| | ||||| ||||||||| Sbjct: 23394 agtgaaatctttagaaagacttatatt-taggaacagagggagta 23437 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaa 80 |||||| ||||||||||||||||||| |||||| Sbjct: 22945 tacttcatccgtttctaaatataagtattttaa 22977 Score = 46.1 bits (23), Expect = 0.13 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 124 ctacactctaaagtatgtctatatacatccgtatgtagt 162 ||||||||| || ||||||||||||||| |||||||||| Sbjct: 23030 ctacactctgaaatatgtctatatacat-cgtatgtagt 22993 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 181 aaaagacttatattatgggaacggagggagta 212 |||||||||||||| | ||||||||||||||| Sbjct: 23304 aaaagacttatatt-taggaacggagggagta 23274 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 aatataagtcttttaagcgatttc 88 ||||||||||||||||| |||||| Sbjct: 23088 aatataagtcttttaagagatttc 23065
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 145 bits (73), Expect = 2e-31 Identities = 145/165 (87%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||| |||||||||||| |||| ||| || ||||||||| Sbjct: 148 tactccctccgttcctaaatacaagtcttttaagagattcaactatag-actacatacgg 206 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | Sbjct: 207 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacatagt-ctgt 265 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| ||| ||| |||||||||||||| | ||||||||||||||| Sbjct: 266 agtgaaatttcttaaaagacttatatt-taggaacggagggagta 309 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 ||||||||||||| ||||||||||||||||||||||||||| ||| | | |||||||| | Sbjct: 194500 tacttcctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacga 194441 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtat 157 |||||||||| ||||| | || | |||||||||||||||||||||||||| Sbjct: 194440 agcaaaatgattgaatattcattttaaagtatgtctatatacatccgtat 194391 Score = 105 bits (53), Expect = 2e-19 Identities = 103/117 (88%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1640 gactacatacggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgt 1699 Query: 156 atgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||| | |||| ||||||||||| | |||||||| | ||||||||||||||| Sbjct: 1700 atgtagt-ttatagtacaatctctaaaaggtcttatatt-taggaacggagggagta 1754 Score = 95.6 bits (48), Expect = 2e-16 Identities = 91/104 (87%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 91 taaaggactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatataca 150 |||| |||||||||| |||||||||||||||||||| |||||||| |||||| || || | Sbjct: 217230 taaaagactacatacgaagcaaaatgagtgaatctatactctaaaatatgtcgatgtata 217289 Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatatt 194 |||||||||||| | ||||| ||||||||||| | |||||||| Sbjct: 217290 tccgtatgtagttc-atagtgcaatctctaaaatgtcttatatt 217332 Score = 91.7 bits (46), Expect = 2e-15 Identities = 101/117 (86%), Gaps = 3/117 (2%) Strand = Plus / Plus Query: 98 ctacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtat 157 |||||||| ||||||| |||| |||||| |||||||||| |||||||||||||||||| Sbjct: 143227 ctacatacggagcaaaacgagtaaatctatgctctaaagtacgtctatatacatccgtat 143286 Query: 158 gtagtcctctagtggaatctct--aaaaagacttatattatgggaacggagggagta 212 |||||| | ||||| || |||| ||||||||||||||| | ||||||||| ||||| Sbjct: 143287 gtagtcttgtagtgaaacctctaaaaaaagacttatatt-taggaacggagcgagta 143342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| | |||||||||| ||| || |||||||||||| ||||| ||||||||| Sbjct: 142805 gactacatacggaacaaaatgagttaatttatactctaaagtatatctatgtacatccgt 142746 Query: 156 atgtagt 162 ||||||| Sbjct: 142745 atgtagt 142739 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtctttta 79 |||||||||||||||||||||||||||||||| Sbjct: 190752 tacttcctccgtttctaaatataagtctttta 190783 Score = 54.0 bits (27), Expect = 5e-04 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 ||||| |||||||||||||||| ||||||||| |||||| | ||| |||||||| | | Sbjct: 142566 gactatatacaaagcaaaatgacagaatctacattctaaaatgagtccatatacat-cat 142624 Query: 156 atgtagtcctctagt 170 |||||||| |||||| Sbjct: 142625 atgtagtcttctagt 142639 Score = 54.0 bits (27), Expect = 5e-04 Identities = 56/63 (88%), Gaps = 2/63 (3%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||||| | |||| |||||||| ||||||||| |||| | ||||||||||||| Sbjct: 207 tccgtatgtagtc-tatagttgaatctcttaaaagacttgtatt-taggaacggagggag 150 Query: 211 taa 213 ||| Sbjct: 149 taa 147 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaag 81 |||| |||||||| |||||||||||||||||||| Sbjct: 309 tactccctccgttcctaaatataagtcttttaag 276 Score = 48.1 bits (24), Expect = 0.032 Identities = 52/60 (86%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||| | ||||||| |||| || |||||||||||||| | |||||||||| |||| Sbjct: 194442 cgtatgtagacatctagtgaaatcgcttaaaagacttatatt-taggaacggaggaagta 194500 Score = 46.1 bits (23), Expect = 0.13 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 174 atctctaaaaagacttatattatgggaacggagggagta 212 |||| |||||||||||||||| | ||||||||||||||| Sbjct: 136721 atctttaaaaagacttatatt-taggaacggagggagta 136684 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtctttt 78 |||| |||||||| ||||||||||||||||| Sbjct: 136684 tactccctccgttcctaaatataagtctttt 136714 Score = 44.1 bits (22), Expect = 0.50 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||||| |||||| ||| |||||| | |||||||| | ||||||||||||| Sbjct: 1652 tccgtatgtagtctcctagtgaaatacctaaaaggtcttatatt-ttggaacggagggag 1594 Query: 211 ta 212 || Sbjct: 1593 ta 1592 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 54 ctccgtttctaaatataagtctttt 78 ||||||| ||||||||||||||||| Sbjct: 143336 ctccgttcctaaatataagtctttt 143312
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 133 bits (67), Expect = 7e-28 Identities = 145/167 (86%), Gaps = 3/167 (1%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||||| |||| ||| ||||||||||||||||| || |||| || | ||||||||||| Sbjct: 1379 agtactccctctgttcctaaatataagtctttttagagatt-ctaatatggactacatac 1321 Query: 106 aaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcct 165 |||||||||||||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 1320 ggagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcc- 1262 Query: 166 ctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 || | |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1261 atattcaaatctctaaaaagacttatatt-taggaacggagggagta 1216 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 |||||||||||||| || | ||||||||||||||||||||||| | ||||| ||||||| Sbjct: 1318 tccgtatgtagtcca-tattagaatctctaaaaagacttatatt-taggaacagagggag 1375 Query: 211 ta 212 || Sbjct: 1376 ta 1377 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgattt 87 |||| |||||||| ||||||||||||||||| || ||||| Sbjct: 1216 tactccctccgttcctaaatataagtctttttagagattt 1255
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 129 bits (65), Expect = 1e-26 Identities = 141/165 (85%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| |||||||||||||||||||| ||||| ||| | | ||||||| || Sbjct: 143731 tactccctccgttactaaatataagtcttttaagagattttactagacgtctacatataa 143672 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 | | |||||||||||| || | | |||| ||||| |||||||||||||||||||||| || Sbjct: 143671 aactaaatgagtgaatatatattttaaaatatgtttatatacatccgtatgtagtccact 143612 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| ||| |||| ||||||||| ||| | ||||||||||||||| Sbjct: 143611 agtgaaatttctagaaagacttacatt-taggaacggagggagta 143568 Score = 107 bits (54), Expect = 4e-20 Identities = 139/166 (83%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacataca 106 ||||| |||||||| | |||||||||| ||||||||||||| ||| | |||||||| Sbjct: 30438 gtactccctccgttccgaaatataagttttttaagcgattttactacgtgtctacatacg 30379 Query: 107 aagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctc 166 | |||||||| ||||| ||||||||||| ||||||||||||||| |||||||| | | | Sbjct: 30378 gaacaaaatgattgaatatacactctaaaatatgtctatatacattcgtatgtaattcac 30319 Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 || || || || |||||||||||||||| | | ||||||||||||| Sbjct: 30318 taatgaaacctgtaaaaagacttatatt-tagaaacggagggagta 30274 Score = 101 bits (51), Expect = 2e-18 Identities = 124/147 (84%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| ||||||| |||||||||||||||||||||||||| |||| || | |||||| | Sbjct: 197492 tactccctccgtccctaaatataagtcttttaagcgattta-ctaagggtcaacatacga 197550 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 | ||||| | ||||| || |||||||||||||||||||||||||||||||||| | Sbjct: 197551 aataaaataattgaatgtatgctctaaagtatgtctatatacatccgtatgtagtttaat 197610 Query: 168 agtggaatctctaaaaagacttatatt 194 | || || ||||||||||||||||||| Sbjct: 197611 aatgaaacctctaaaaagacttatatt 197637 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| ||||||||||||||||||| |||||| || ||||| |||| |||||||||| | Sbjct: 208503 tactccctccgtttctaaatataaatctttttagagattttactaagtgactacatacga 208444 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 | ||||| | ||||| || | |||||| |||||||||||| | | ||||||||| ||| Sbjct: 208443 aataaaataaatgaatgtatattctaaaatatgtctatatataatcatatgtagtcttct 208384 Query: 168 agtggaatctctaaaaagact 188 |||| || |||| ||||||| Sbjct: 208383 agtgaaacctcttcaaagact 208363 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtctttt 78 |||| |||||||||||||||||||||||||| Sbjct: 30274 tactccctccgtttctaaatataagtctttt 30304 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtctttt 78 |||| ||| |||||||||||||||||||||| Sbjct: 197654 tactcccttcgtttctaaatataagtctttt 197624 Score = 44.1 bits (22), Expect = 0.50 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 155 tatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||| | |||||| ||||||| |||||||||||||| | | ||||||||||||| Sbjct: 143675 tatgtagacgtctagtaaaatctcttaaaagacttatatt-tagtaacggagggagta 143731 Score = 40.1 bits (20), Expect = 7.8 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||| |||| |||||||||||||| ||||||| | | ||||||||||||| Sbjct: 208445 cgtatgtagtcacttagtaaaatctctaaaaagatttatatt-tagaaacggagggagta 208503
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 129 bits (65), Expect = 1e-26 Identities = 141/165 (85%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| ||||||||||||||||||||||||||||| ||||| ||| | | |||||||| Sbjct: 389 tactccctccgtttctaaatataagtcttttaagatatttcactagaagtctacatacgg 448 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||||| |||||||| | |||||||||||||||| |||||||||||||| | || Sbjct: 449 agcaaaatgagttaatctacattgtaaagtatgtctatatgcatccgtatgtagttcact 508 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 | | || |||| |||| |||||||| | ||||||||||||||| Sbjct: 509 aaagaaacctctttaaagtcttatatt-taggaacggagggagta 552 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||| | ||||||| ||| ||| |||||||||||||| | | ||||||||||| Sbjct: 449 tccgtatgtagacttctagtgaaatatcttaaaagacttatatt-tagaaacggagggag 391 Query: 211 ta 212 || Sbjct: 390 ta 389
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 125 bits (63), Expect = 2e-25 Identities = 145/167 (86%), Gaps = 4/167 (2%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacataca 106 ||||| |||||||| ||||||| ||||| ||| | |||||| ||| || ||||||||| Sbjct: 7401 gtactccctccgttcctaaatacaagtccttttaaagatttcactatag-actacatacg 7459 Query: 107 aagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctc 166 ||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 7460 aagcaaaatgagttaatctacattctaaagtatggttatatacatctgtatgtagtcc-a 7518 Query: 167 tagtggaatctc-taaaaagacttatattatgggaacggagggagta 212 |||||||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 7519 tagtggaatctcaaaaaaagacttatatt-taggaacggagggagta 7564 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtctttt 78 |||| |||||||| ||||||||||||||||| Sbjct: 7564 tactccctccgttcctaaatataagtctttt 7534 Score = 40.1 bits (20), Expect = 7.8 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||| | ||||| ||||| ||||| ||||| |||| | ||||||||||||||| Sbjct: 7459 cgtatgtagtc-tatagtgaaatctttaaaaggacttgtatt-taggaacggagggagta 7402
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 123 bits (62), Expect = 7e-25 Identities = 135/158 (85%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 55 tccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaa 114 |||||| |||||||||||||||| ||| ||||| |||| |||||||| | ||||| Sbjct: 8521 tccgttcctaaatataagtctttaaagatatttcactaagaatctacatacggaccaaaa 8462 Query: 115 tgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaa 174 ||||||||||||||||||||| ||||||||||||||||||||||||||| || || || Sbjct: 8461 tgagtgaatctacactctaaaatatgtctatatacatccgtatgtagtctattaatgaaa 8402 Query: 175 tctctaaaaagacttatattatgggaacggagggagta 212 ||||| ||| ||||||||| | ||||||||||||||| Sbjct: 8401 tctctttaaaaacttatatt-taggaacggagggagta 8365 Score = 93.7 bits (47), Expect = 6e-16 Identities = 91/103 (88%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 110 caaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctag 169 |||||||| |||||||| ||| |||| ||||||||| |||||||||||||||| | ||| Sbjct: 246 caaaatgaatgaatctatactttaaaatatgtctatgtacatccgtatgtagt-ttatag 304 Query: 170 tggaatctctaaaaagacttatattatgggaacggagggagta 212 || ||||||||||||| |||||||| | ||||||||||||||| Sbjct: 305 tgcaatctctaaaaagtcttatatt-taggaacggagggagta 346 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 112 aaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtg 171 |||| ||||||||||||||||||| ||||||||||||||| |||||||||| || || Sbjct: 8331 aaattagtgaatctacactctaaaatatgtctatatacatttgtatgtagtctattaatg 8272 Query: 172 gaatctctaaaaagacttatatt 194 ||||||| ||||||||||||| Sbjct: 8271 aaatctctttaaagacttatatt 8249 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||||| |||||||| |||||||||||| ||| ||| |||||| ||| |||||||||| Sbjct: 8363 agtactccctccgttcctaaatataagtttttaaagagatttcattaatagactacatac 8422 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatatt 194 ||||||| ||||| ||||||||||||| ||||| | |||||||| Sbjct: 244 tccgtatatagtcttctagtggaatctttaaaaggtcttatatt 201 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 62 ctaaatataagtcttttaagcgatttctctaaaggactacatacaaa 108 |||||||||||||||| ||| |||||| ||| ||||||||||||| Sbjct: 8246 ctaaatataagtctttaaagagatttcattaatagactacatacaaa 8292
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 121 bits (61), Expect = 3e-24 Identities = 147/173 (84%), Gaps = 2/173 (1%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactaca 102 |||| |||| |||||||| ||||||||| ||||||||| || ||| ||| | |||||| Sbjct: 1612 tataatactccctccgttcttaaatataaatcttttaagagacttcactagtgaactaca 1553 Query: 103 tacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagt 162 | || | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 1552 tgcagaacaaaatgaatgaatgtacactctaaagtatgtctatataaatccgtatgtagt 1493 Query: 163 cctctagtggaatctctaaaaagacttatattatgggaacggagggagtaaaa 215 |||| || || || |||||||||||||||| | |||| ||||||||||||| Sbjct: 1492 -ttctaatgaaacctttaaaaagacttatatt-taggaatggagggagtaaaa 1442
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 121 bits (61), Expect = 3e-24 Identities = 140/165 (84%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| ||||||||||||||||||||||||||||| ||||| || | | |||||||| Sbjct: 88 tactccctccgtttctaaatataagtcttttaagatatttcagtagaagtctacatacgg 147 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||||| |||||||| | |||||||||||||||| |||||||||||||| | || Sbjct: 148 agcaaaatgagttaatctacattgtaaagtatgtctatatgcatccgtatgtagttcact 207 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 | | || |||| |||| |||||||| | ||||||||||||||| Sbjct: 208 aaagaaacctctttaaagtcttatatt-taggaacggagggagta 251 Score = 44.1 bits (22), Expect = 0.50 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||| | |||| || ||| ||| |||||||||||||| | | ||||||||||| Sbjct: 148 tccgtatgtagacttctactgaaatatcttaaaagacttatatt-tagaaacggagggag 90 Query: 211 ta 212 || Sbjct: 89 ta 88
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 119 bits (60), Expect = 1e-23 Identities = 138/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 53 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 112 |||| ||| ||||||||||||||||| || |||| || | ||||||||||| ||||| Sbjct: 1378 cctctgttcctaaatataagtctttttagagatt-ctaatatggactacatacggagcaa 1320 Query: 113 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 172 ||||||||||||||||||||||| || |||||||| |||||||||||||| | || | Sbjct: 1319 aatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtgc-atattca 1261 Query: 173 aatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1260 aatctctaaaaagacttatatt-taggaacggagggagta 1222 Score = 48.1 bits (24), Expect = 0.032 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatatt 194 |||||||||||||| || | ||||||||||||||||||||||| Sbjct: 1324 tccgtatgtagtcca-tattagaatctctaaaaagacttatatt 1366 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgattt 87 |||| |||||||| ||||||||||||||||| || ||||| Sbjct: 1222 tactccctccgttcctaaatataagtctttttagagattt 1261
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||||||||||||||||||| |||| || |||||| | Sbjct: 817 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattcgg 876 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatat 147 |||||||||| |||||||| |||||||||||||||||||| Sbjct: 877 agcaaaatgattgaatctatactctaaagtatgtctatat 916 Score = 44.1 bits (22), Expect = 0.50 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| |||| || |||||||||||||| | ||||||||||||||| Sbjct: 861 tagtgaaatcgcttaaaagacttatatt-taggaacggagggagta 817
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 119 bits (60), Expect = 1e-23 Identities = 137/160 (85%), Gaps = 2/160 (1%) Strand = Plus / Minus Query: 53 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 112 |||||||| ||| |||||||||||||||| ||||| ||| | |||||||| |||||| Sbjct: 50626 cctccgttcctagatataagtcttttaagatatttcactaggagtctacatacgaagcaa 50567 Query: 113 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 172 |||||||||||||||||| |||| ||||||||||||||||| |||||||||| ||| || Sbjct: 50566 aatgagtgaatctacactttaaaatatgtctatatacatccatatgtagtccactaatga 50507 Query: 173 aatctctaaaaagacttatattatgggaacggagggagta 212 || || | ||| |||||||||| | |||||||||||||| Sbjct: 50506 aaccttttaaa-gacttatatt-taagaacggagggagta 50469
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 113 bits (57), Expect = 7e-22 Identities = 79/85 (92%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 128 actctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctctaaaaagac 187 ||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 52391 actctaaagtatgtctatatacatccgtatgtagtcccctagtgaaacatctaaaaagac 52450 Query: 188 ttatattatgggaacggagggagta 212 ||||||| | ||||||||||||||| Sbjct: 52451 ttatatt-taggaacggagggagta 52474 Score = 73.8 bits (37), Expect = 6e-10 Identities = 83/97 (85%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 53 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 112 |||||||||||||||| |||||||||||| ||||| ||| | ||||||||| || || Sbjct: 69791 cctccgtttctaaata-aagtcttttaagagattttactagcgaactacatacgaaataa 69733 Query: 113 aatgagtgaatctacactctaaagtatgtctatatac 149 ||||| | ||| |||||||||||||||||||| |||| Sbjct: 69732 aatgaataaatttacactctaaagtatgtctacatac 69696 Score = 58.0 bits (29), Expect = 3e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 144 atatacatccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacg 203 |||||||||||||||||| | || || || ||||||||||||||||||| | |||||| Sbjct: 57411 atatacatccgtatgtagatttttaatgaaacctctaaaaagacttatatt-taggaacg 57353 Query: 204 gagggagta 212 ||||||||| Sbjct: 57352 gagggagta 57344 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtctttt 78 |||| |||||||| ||||||||||||||||| Sbjct: 57344 tactccctccgttcctaaatataagtctttt 57374 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtctttt 78 |||| |||||||| ||||||||||||||||| Sbjct: 52474 tactccctccgttcctaaatataagtctttt 52444 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tttcaactataattatttag 307 |||||||||||||||||||| Sbjct: 20299 tttcaactataattatttag 20318
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 113 bits (57), Expect = 7e-22 Identities = 139/165 (84%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| ||||||| |||||||||||| ||||||| ||||| || | | |||||||| Sbjct: 2192 tactccctccgtacctaaatataagtattttaagatatttcattagatgtctacatacgg 2251 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||| |||| ||| ||| |||| |||||||||||||||||||||||||||| | Sbjct: 2252 agcaaaatgaatgaacctatactttaaaatatgtctatatacatccgtatgtagtccatt 2311 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||| | | ||||| ||||||||||||| | ||||||||||||||| Sbjct: 2312 agttggacctctagaaagacttatatt-taggaacggagggagta 2355 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 |||| |||||||| |||||||||||||||| Sbjct: 2355 tactccctccgttcctaaatataagtcttt 2326
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 113 bits (57), Expect = 7e-22 Identities = 139/165 (84%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||| | ||||||||||||||||| || |||||| |||| |||||||||| Sbjct: 22020 tactccctccgatcctaaatataagtctttttagagatttcactaagtgactacatacgt 21961 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 || |||||| ||||| | || || |||||||||| ||||||||||||||||| || ||| Sbjct: 21960 agtaaaatgcatgaatgtgcattccaaagtatgtccatatacatccgtatgtaatcttct 21901 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| ||||||| ||||||||||||| | ||||| ||||||||| Sbjct: 21900 agtgaaatctctttaaagacttatatt-taggaacagagggagta 21857 Score = 113 bits (57), Expect = 7e-22 Identities = 104/117 (88%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 5480 gactacatacgaagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgt 5421 Query: 156 atgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||| | |||| ||||||||||| | |||||||| | ||||||||||||||| Sbjct: 5420 atgtagt-ttatagtataatctctaaaaggtcttatatt-taggaacggagggagta 5366 Score = 56.0 bits (28), Expect = 1e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||| ||||| |||||||||||||||||||||| | ||| ||||||||||| Sbjct: 21962 cgtatgtagtcacttagtgaaatctctaaaaagacttatatt-taggatcggagggagta 22020 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||| |||| ||| |||||||||||||||| ||| |||||| ||| | || ||||||| Sbjct: 21857 tactccctctgttcctaaatataagtctttaaagagatttcactagaagattacatac 21914 Score = 42.1 bits (21), Expect = 2.0 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||| ||||||| ||| |||||| | |||||||| | |||| |||||||||| Sbjct: 5470 cgtatgtagtcttctagtgaaattcctaaaaggtcttatatt-ttggaatggagggagta 5528 Query: 213 aaacacagt 221 | |||||| Sbjct: 5529 tatcacagt 5537
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 109 bits (55), Expect = 1e-20 Identities = 142/167 (85%), Gaps = 8/167 (4%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacataca 106 ||||| |||||||| |||||||||||||| | || |||||| ||| ||||||||||| Sbjct: 8724 gtactccctccgttcctaaatataagtctctgtagagatttcactat-ggactacatacg 8666 Query: 107 aagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctc 166 ||||||||||||||||||||||||||||| | ||||||||| ||||| |||| Sbjct: 8665 aagcaaaatgagtgaatctacactctaaaatgcatctatatac-----tatgtggtcc-a 8612 Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagtaa 213 |||||||||||||| ||||||||||||| | |||||||||||||||| Sbjct: 8611 tagtggaatctctacaaagacttatatt-taggaacggagggagtaa 8566 Score = 48.1 bits (24), Expect = 0.032 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||||| ||||| |||||||| | ||||||||||| | ||||||||||||||| Sbjct: 8666 cgtatgtagtcca-tagtgaaatctctacagagacttatatt-taggaacggagggagta 8723 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttt 77 |||| |||||||| |||||||||||||||| Sbjct: 8567 tactccctccgttcctaaatataagtcttt 8596
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 109 bits (55), Expect = 1e-20 Identities = 95/105 (90%), Gaps = 5/105 (4%) Strand = Plus / Plus Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | Sbjct: 3561 agcaaaatgagtgaacctacact---aagtatgtctatatacatccgtatgtagtcc-at 3616 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||| || ||||||||||||||| | ||||||||||||||| Sbjct: 3617 agtggaatgtcgaaaaagacttatatt-taggaacggagggagta 3660 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtctttt 78 ||||| |||||||| ||||||||||||||||| Sbjct: 3661 gtactccctccgttcctaaatataagtctttt 3630 Score = 44.1 bits (22), Expect = 0.50 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||||||| ||| |||||||||| ||||| ||||||||| Sbjct: 3546 tagtggaatctctagaaatacttatatta-aggaaccgagggagta 3502
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 105 bits (53), Expect = 2e-19 Identities = 139/165 (84%), Gaps = 2/165 (1%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| | ||||||||| | ||| || ||||| ||| | |||||||||| Sbjct: 5640 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 5699 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||| | | Sbjct: 5700 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt-ttat 5758 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||| ||||||||||| | |||||||| | ||||||||||||||| Sbjct: 5759 agtacaatctctaaaaggtcttatatt-taggaacggagggagta 5802 Score = 54.0 bits (27), Expect = 5e-04 Identities = 55/63 (87%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggag 210 ||||||||||||| ||||||| ||| |||||| | |||||||| | ||||||||||||| Sbjct: 5700 tccgtatgtagtcttctagtgaaatacctaaaaggtcttatatt-ttggaacggagggag 5642 Query: 211 taa 213 ||| Sbjct: 5641 taa 5639
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 103 bits (52), Expect = 6e-19 Identities = 104/118 (88%), Gaps = 5/118 (4%) Strand = Plus / Plus Query: 95 ggactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccg 154 |||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 3608 ggactatatacggagcaaaatgagtgaacctacact---aagtatgtctatatacatccg 3664 Query: 155 tatgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||| ||||||||| || |||||||||| |||| | ||||||||||||||| Sbjct: 3665 tatgtagtcc-atagtggaatgtcgaaaaagacttgtatt-taggaacggagggagta 3720 Score = 44.1 bits (22), Expect = 0.50 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||||||| ||| |||||||||| ||||| ||||||||| Sbjct: 3606 tagtggaatctctagaaatacttatatta-aggaaccgagggagta 3562
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 99.6 bits (50), Expect = 1e-17 Identities = 103/118 (87%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 70069 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtctatatacatccat 70010 Query: 156 atgtagtcctcta-gtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| || || | || ||||||||||||||| ||||| | ||||||||||||||| Sbjct: 70009 atgtggtagtccatttgaaatctctaaaaagacaaatatt-taggaacggagggagta 69953
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 99.6 bits (50), Expect = 1e-17 Identities = 139/166 (83%), Gaps = 2/166 (1%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||||| ||||||||| | ||| || |||||| |||| |||||||||| Sbjct: 10549 tactacctccgtttcaaaatataagaccttttagagatttcattaaaagactacatacgg 10490 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||||||||||| || | ||||||||| |||||| |||||||| | | Sbjct: 10489 agcaaaatgagtgaatctacactttagaatatgtctatgtacatctatatgtagt-ttat 10431 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagtaa 213 | || ||| ||||||| | |||||||| | |||||||||||||||| Sbjct: 10430 aatgcaatatctaaaaggtcttatatt-taggaacggagggagtaa 10386 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 151 tccgtatgtagtcctctagtggaatctctaaaaagacttatatt 194 ||||||||||||| | || || ||||||||||| | |||||||| Sbjct: 10489 tccgtatgtagtcttttaatgaaatctctaaaaggtcttatatt 10532
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 99.6 bits (50), Expect = 1e-17 Identities = 137/162 (84%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 53 cctccgtttctaaatataagtcttttaagcgatttct-ctaaaggactacatacaaagca 111 |||||||| ||||||||||||||||| | ||||| | || |||||| ||||| | || Sbjct: 8881 cctccgttcctaaatataagtcttttcaaacatttcaaccaagggactatatacagaaca 8822 Query: 112 aaatgagtgaatctacactctaaagtatgtctat-atacatccgtatgtagtcctctagt 170 |||||||| || ||| ||| |||| ||||||||| ||||||||||||||||| |||| Sbjct: 8821 aaatgagtaaacctatactttaaaatatgtctatgatacatccgtatgtagtttaatagt 8762 Query: 171 ggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 8761 ggaatctctaaaaagacttatatt-taggaactgagggagta 8721 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||||||||| ||| |||||||||||| | | | |||||| || || |||| |||| Sbjct: 15216 tacttcctccatttttaaatataagtcgtattaaagatttcattagagaactatatacgg 15157 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagt 162 | |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 15156 aacaaaatgaatgaatctacactctaaaatatgtctatatttatccggatgtagt 15102
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 99.6 bits (50), Expect = 1e-17 Identities = 103/118 (87%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 2356 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtctatatacattcgt 2297 Query: 156 atgtagtcctcta-gtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| || || | || ||||||||||||||| ||||| | ||||||||||||||| Sbjct: 2296 atgtggtagtccatttgaaatctctaaaaagacaaatatt-taggaacggagggagta 2240
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 97.6 bits (49), Expect = 4e-17 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||| |||||||| ||| |||||||||||||||| ||||||| |||||||| | Sbjct: 5336 agcaaaatgaatgaatctatactttaaagtatgtctatatgcatccgtttgtagtccatt 5277 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||| ||||||||| || ||||||||| | ||||||||||||||| Sbjct: 5276 agttgaatctctagaagaacttatatt-taggaacggagggagta 5233 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 130 tctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctctaaaaagactt 189 |||||||||| |||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 5400 tctaaagtatatctatatacatccgtatgtagtccactagtaaaatctctagaaagactt 5459 Query: 190 atatt 194 ||||| Sbjct: 5460 atatt 5464 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||||||||||||||||||| |||| | ||||||| Sbjct: 5156 tactccctccgttcctaaatataagtcttttaagcgatttcactaaggatctacataggg 5215 Query: 108 agcaaaatgagtgaatctac 127 |||||||||| ||||||||| Sbjct: 5216 agcaaaatgattgaatctac 5235 Score = 44.1 bits (22), Expect = 0.50 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| |||| || |||||||||||||| | ||||||||||||||| Sbjct: 5200 tagtgaaatcgcttaaaagacttatatt-taggaacggagggagta 5156 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatat 69 ||||||||||||||| |||||||| Sbjct: 5491 agtacttcctccgttcctaaatat 5468 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 tcaactataattatttagctacagaggaagta 321 |||||||||||||||||| || ||| |||||| Sbjct: 3025 tcaactataattatttaggtagagaagaagta 3056
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1032 gactacatacgaagtaaaatgagttaatctacactctaaaatatgtctatatacatccgt 973 Query: 156 atgt 159 |||| Sbjct: 972 atgt 969
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 7819 gactacatacggagcaaaatgagtgaatctacactctaaaatgtgtctatatacatccgt 7760 Query: 156 atgt 159 |||| Sbjct: 7759 atgt 7756
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 93.7 bits (47), Expect = 6e-16 Identities = 66/71 (92%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 142 ctatatacatccgtatgtagtcctctagtggaatctctaaaaagacttatattatgggaa 201 ||||||||||||||||||||||| |||||| |||||||| ||||||||||||| | |||| Sbjct: 371 ctatatacatccgtatgtagtccactagtgaaatctctacaaagacttatatt-taggaa 429 Query: 202 cggagggagta 212 ||||||||||| Sbjct: 430 cggagggagta 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 105 |||||| |||||||| |||||||||||||||| || |||||| ||| ||||||||||| Sbjct: 442 agtactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatac 383
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 93.7 bits (47), Expect = 6e-16 Identities = 88/102 (86%), Gaps = 6/102 (5%) Strand = Plus / Plus Query: 95 ggactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctata------ta 148 ||||||||||| ||||||| |||||||||||| ||| ||||| ||||||||| || Sbjct: 17128 ggactacatacgaagcaaagtgagtgaatctatactttaaagcatgtctatatacatgta 17187 Query: 149 catccgtatgtagtcctctagtggaatctctaaaaagactta 190 |||| ||||||||||| ||||||||| ||||||||||||||| Sbjct: 17188 catctgtatgtagtcccctagtggaacctctaaaaagactta 17229 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 153 cgtatgtagtcctctagtggaatctctaaaaaga 186 |||||||||||| ||||||||||||||||||||| Sbjct: 17139 cgtatgtagtcccctagtggaatctctaaaaaga 17106
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 93.7 bits (47), Expect = 6e-16 Identities = 85/95 (89%), Gaps = 2/95 (2%) Strand = Plus / Plus Query: 119 tgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctc 178 |||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 2064 tgaatctacaatctaaaatatgtctatatacatccgtatatagtcc-gtagtggaatctt 2122 Query: 179 taaaaagacttatat-tatgggaacggagggagta 212 |||||| |||||||| | | ||||||||||||||| Sbjct: 2123 taaaaatacttatatatttaggaacggagggagta 2157
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 62 ctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaatgagtga 121 |||||||| ||||||| || |||||| ||| ||||||||||| |||||||||||| | Sbjct: 198463 ctaaatatttgtctttttagagatttcaacaaatgactacatacagagcaaaatgagtaa 198522 Query: 122 atctacactctaaagtatgtctatatacatccgtatgt 159 ||||||||| |||| |||||||||||||||||| |||| Sbjct: 198523 atctacactgtaaaatatgtctatatacatccgcatgt 198560 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 62 ctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaatgagtga 121 |||||||| ||||||| || |||||| ||| ||||||||||| |||||||||||| | Sbjct: 44709 ctaaatatttgtctttttagagatttcaacaaatgactacatacagagcaaaatgagtaa 44768 Query: 122 atctacactctaaagtatgtctatatacatccgtatgt 159 ||||||||| |||| |||||||||||||||||| |||| Sbjct: 44769 atctacactgtaaaatatgtctatatacatccgcatgt 44806
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 91.7 bits (46), Expect = 2e-15 Identities = 102/118 (86%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 50028 gactacatacggagcaaaatgagtgaatctacactctaaaatatgtctacatgcatccgt 49969 Query: 156 atgtagtcctcta-gtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| || || | || ||| |||||||||||||||||| | ||||| ||||||||| Sbjct: 49968 atgttgtagtccatttgaaatgtctaaaaagacttatatt-taggaacagagggagta 49912 Score = 50.1 bits (25), Expect = 0.008 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 176 ctctaaaaagacttatattatgggaacggagggagta 212 ||||| ||||||||||||||| ||||||||||||||| Sbjct: 50041 ctctagaaagacttatattat-ggaacggagggagta 50076 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtctttt 78 ||||| |||| ||| ||||||||||||||||| Sbjct: 49911 gtactccctctgttcctaaatataagtctttt 49942
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 91.7 bits (46), Expect = 2e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||| |||||| || |||||| || ||||| |||| Sbjct: 383 tactccctccgttcctaaatataggtctttgtagagatttcaacaagtgactatatacgg 442 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtat 157 |||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 443 agcaaaatgagtgaatctacactctaaaatacgtctatatacatccgtat 492 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 173 aatctctaaaaagacttatattatgggaacggagggagtaa 213 |||||||| |||||| |||||| | |||||||||||||||| Sbjct: 421 aatctctacaaagacctatatt-taggaacggagggagtaa 382
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 89.7 bits (45), Expect = 9e-15 Identities = 92/105 (87%), Gaps = 2/105 (1%) Strand = Plus / Minus Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||||||| |||||||| | |||||||||||||||||||||||| | | Sbjct: 1134 agcaaaatgagtgaatctatactctaaaatgtgtctatatacatccgtatgtagttc-at 1076 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||| |||||||| || | |||||||| | ||||||||||||||| Sbjct: 1075 agtaaaatctctagaaggtcttatatt-taggaacggagggagta 1032 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Minus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatcc 153 |||||||||| | |||||||||||||| || | | |||| |||| |||||||||||| Sbjct: 1333 gactacatacggaacaaaatgagtgaatgtatattttaaaatatgactatatacatcc 1276
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 966 gactacatacggagcaaaatgagtgaatctacactctaaaacatgtctacatacatccgt 1025 Query: 156 atgt 159 |||| Sbjct: 1026 atgt 1029
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 85.7 bits (43), Expect = 1e-13 Identities = 75/85 (88%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 110 caaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctag 169 ||||||||||||||||| ||||||| | |||||||||||||||||||||||| | ||| Sbjct: 3904 caaaatgagtgaatctatactctaavatgtgtctatatacatccgtatgtagttc-atag 3962 Query: 170 tggaatctctaaaaagacttatatt 194 ||||||||||| || | |||||||| Sbjct: 3963 tggaatctctagaaggtcttatatt 3987
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 81.8 bits (41), Expect = 2e-12 Identities = 138/165 (83%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| ||||||||||| | ||| || |||| | ||| || |||| ||| | Sbjct: 703 tactccctccgttcctaaatataagaccttttagagattacactatag-actaggtacga 761 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 ||||||||||||||||||||| ||||| |||| ||| ||| ||||||||||||| | | Sbjct: 762 agcaaaatgagtgaatctacatcctaaaatatgactacata-atccgtatgtagttc-at 819 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||||||||||||| | |||||||| | |||||||||| |||| Sbjct: 820 agtggaatctctaaaatgtcttatatt-taggaacggaggaagta 863 Score = 44.1 bits (22), Expect = 0.50 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 167 tagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| ||||||||||| | |||||||| | ||||||||||||||| Sbjct: 747 tagtgtaatctctaaaaggtcttatatt-taggaacggagggagta 703 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataag 72 ||||||||||||| ||||||||||| Sbjct: 863 tacttcctccgttcctaaatataag 839
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 81.8 bits (41), Expect = 2e-12 Identities = 97/113 (85%), Gaps = 2/113 (1%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaag-gactacataca 106 |||| |||||||| |||||||||||||||| || |||| || ||| ||||||||||| Sbjct: 51932 tactccctccgttcctaaatataagtctttctagagatt-ctaacaagcgactacataca 51874 Query: 107 aagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgt 159 || ||||||| |||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 51873 tagtaaaatgaatgaatctatactctaaaatatgtctatgtacatccgtatgt 51821 Score = 77.8 bits (39), Expect = 4e-11 Identities = 142/171 (83%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactac 101 ||||| |||| |||||||| |||||||||||||||| ||| |||| | || || || || Sbjct: 23106 atatactactccctccgttcctaaatataagtctttgaagtgattccattatag-accac 23164 Query: 102 atacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtag 161 ||| ||||||||||||||||||| ||| |||| | ||||||||||||||||||| | Sbjct: 23165 ataaggagcaaaatgagtgaatctatact-taaaatgcatctatatacatccgtatgtgg 23223 Query: 162 tcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 | | ||||| |||||||| ||||||||||||| | |||||||||| |||| Sbjct: 23224 ttca-tagtgaaatctctacaaagacttatatt-taggaacggaggaagta 23272 Score = 52.0 bits (26), Expect = 0.002 Identities = 39/42 (92%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 172 gaatctctaaaaagacttatattatgggaacggagggagtaa 213 ||||||||| ||||||||||||| | |||||||||||||||| Sbjct: 51893 gaatctctagaaagacttatatt-taggaacggagggagtaa 51933 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 ||||||||||||| |||||||||||||||| Sbjct: 23272 tacttcctccgttcctaaatataagtcttt 23243 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tccgtttctaaatataagtctttt 78 |||||| ||||||||||||||||| Sbjct: 51775 tccgttcctaaatataagtctttt 51798
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 95 ggactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccg 154 ||||||||||| | | ||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 2323 ggactacatacggatccaaatgagtggatctactctctaaagtatgtttatatacatccg 2264 Query: 155 tatgtagt 162 |||||||| Sbjct: 2263 tatgtagt 2256 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 44 atagtacttcctccgtttctaaatataagtctttt 78 |||||||| ||||| || ||||||||||||||||| Sbjct: 2204 atagtactgcctccattcctaaatataagtctttt 2238
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| || Sbjct: 966 gactacatacggagcaaaatgagtgaatctacactctaaaacatgtctacatacatctgt 1025 Query: 156 atgt 159 |||| Sbjct: 1026 atgt 1029
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 97 actacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatc 152 ||||||||| | |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 172967 actacatacggaacaaaatgagtgaatctacactctaaattatgtctatatacatc 173022
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||||||| ||||||||||||||||||| |||||| | |||||||| |||||||||| Sbjct: 24758 gactacatacggagcaaaatgagtgaatctagactctagaatatgtctacatacatccgt 24817 Query: 156 atgt 159 |||| Sbjct: 24818 atgt 24821 Score = 48.1 bits (24), Expect = 0.032 Identities = 37/40 (92%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 176 ctctaaaaagacttatattatgggaacggagggagtaaaa 215 ||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 24839 ctctaaaaagactaatatt-tgggaacgaagggagtaaaa 24877
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 79.8 bits (40), Expect = 9e-12 Identities = 100/116 (86%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 97 actacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgta 156 |||||||||||||||||||||||||||||| | | |||| |||||||||||||| |||| Sbjct: 178028 actacatacaaagcaaaatgagtgaatctata-tttaaaagatgtctatatacattcgta 178086 Query: 157 tgtagtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||||| | || || ||| ||||||| | |||||||| | ||||||||||||||| Sbjct: 178087 tgtagttc-ataatgtaatatctaaaatgtcttatatt-taggaacggagggagta 178140 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 111 aaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtc 163 ||||||| |||||||| |||||| ||||||||||| ||||||||||||||| Sbjct: 167407 aaaatgaatgaatctatcttctaaaatatgtctatattcatccgtatgtagtc 167355
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 79.8 bits (40), Expect = 9e-12 Identities = 109/132 (82%) Strand = Plus / Minus Query: 63 taaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaatgagtgaa 122 ||||||||||||||||||| |||| || | | ||| |||| || |||||| | |||| Sbjct: 3896 taaatataagtcttttaagatattttattagaagtctatatacgaaacaaaataaatgaa 3837 Query: 123 tctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctctaaa 182 |||| ||| |||| |||||||||||||||||||||||||||| ||| || || ||| | Sbjct: 3836 tctatactttaaaatatgtctatatacatccgtatgtagtccactaatgaaacctcctta 3777 Query: 183 aagacttatatt 194 |||||||||||| Sbjct: 3776 aagacttatatt 3765
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 79.8 bits (40), Expect = 9e-12 Identities = 86/100 (86%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 95 ggactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccg 154 |||||||||| ||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 2296 ggactacataagaagcaaaatgagtgaatctacactctaaaatacatctatatacattcc 2237 Query: 155 tatgtagtcctctagtggaatctctaaaaagacttatatt 194 | |||||||| | | || ||||||||||| | |||||||| Sbjct: 2236 tgtgtagtccgc-attgaaatctctaaaaggtcttatatt 2198
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 77.8 bits (39), Expect = 4e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 ||||||||||||| |||||||||| | |||| | ||||| || ||||| |||| | Sbjct: 27437 tacttcctccgttcctaaatataaatatttttaaagattttattatgagactatatacga 27496 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 |||||||||| |||| ||||||| |||| ||||||||||||||| | |||||||| | || Sbjct: 27497 agcaaaatgaatgaacctacactttaaattatgtctatatacatacatatgtagttccct 27556 Query: 168 agtggaatctctaaaaagacttatatt 194 | ||| ||||| ||||||||||||| Sbjct: 27557 gatagaacctctagaaagacttatatt 27583
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 54 ctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaa 113 ||||||| | ||||||||||||| | | |||||| ||| |||||||||| ||||||| Sbjct: 11655 ctccgttccaaaatataagtcttcttaaagatttcactaggagactacatacgaagcaaa 11714 Query: 114 atgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcc 164 |||||| ||| ||||||||||| | |||||||| |||| ||||||||||| Sbjct: 11715 atgagtaaatttacactctaaattgtgtctataaacatatgtatgtagtcc 11765 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttatatt 194 ||||||||||| |||||| ||||| ||| |||||||||||| Sbjct: 11707 cgtatgtagtctcctagtgaaatctttaagaagacttatatt 11666 Score = 44.1 bits (22), Expect = 0.50 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 100 acatacaaagcaaaatgagtgaatctacactctaaagtatgtctata-tacatccgtatg 158 |||||||||| ||||| | |||||||| ||| |||| ||||| ||| |||||||||||| Sbjct: 11513 acatacaaagtaaaataaatgaatctatactttaaaatatgtttattctacatccgtatg 11454 Query: 159 ta 160 || Sbjct: 11453 ta 11452
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 73.8 bits (37), Expect = 6e-10 Identities = 136/165 (82%), Gaps = 3/165 (1%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 107 |||| |||||||| |||||||||||||||| | |||||| || |||| |||||| Sbjct: 2946 tactccctccgttcctaaatataagtctttggacagatttcattat-ggaccacatacgg 2888 Query: 108 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 167 || |||||||||||| ||| |||||||| | |||| |||||||||||||| |||| | Sbjct: 2887 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcc-at 2829 Query: 168 agtggaatctctaaaaagacttatattatgggaacggagggagta 212 |||| |||||||| ||||||||||||| | |||| |||||||||| Sbjct: 2828 agtgaaatctctacaaagacttatatt-taggaatggagggagta 2785
>gb|AF479764.1| Triticum aestivum glutathione-S-transferase 28e45 mRNA, complete cds Length = 1018 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 112 aaatgagtgaatctacactctaaagtatgtctatatacatccgtatgt 159 |||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 941 aaatgaatgtatctacactctaaaatatgtctatatacatccgtatgt 894
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/70 (88%), Gaps = 2/70 (2%) Strand = Plus / Plus Query: 95 ggactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccg 154 ||||||||||| |||||||||||||||||||||||||||| || | | |||||||| | Sbjct: 56824 ggactacatacggagcaaaatgagtgaatctacactctaaaatacgac--tatacatctg 56881 Query: 155 tatgtagtcc 164 |||||||||| Sbjct: 56882 tatgtagtcc 56891 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 102 atacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtag 161 ||||| ||||| |||||||||| || |||||||| ||||||||||||||| | ||||||| Sbjct: 59995 atacagagcaacatgagtgaatttatactctaaattatgtctatatacattcatatgtag 59936 Query: 162 t 162 | Sbjct: 59935 t 59935 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 114 atgagtgaatctacactctaaagtatgtctatatacatcc 153 ||||||||||||| ||| |||| ||||| ||||||||||| Sbjct: 49512 atgagtgaatctatactttaaaatatgtttatatacatcc 49473 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataa 71 |||| ||||||||||||||||||| Sbjct: 56938 tactccctccgtttctaaatataa 56915
>emb|X58564.1|HVPRP1A H.vulgare mRNA for a pathogenesis-related protein (Hv-1a) Length = 809 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 73 tcttttaagcgatttctctaaaggactacatacaaagcaaaatgagtgaatctacactct 132 ||||||||| ||||| |||| |||| |||||| || |||||| ||||||| || ||||| Sbjct: 697 tcttttaagagattttactaatggacaacatacgaaacaaaataagtgaatgtatactct 756 Query: 133 aaagtatgtctatatacatccgtatgtagt 162 ||||||| |||||| ||||| |||||||| Sbjct: 757 aaagtatatctataaacatctatatgtagt 786
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 97 actacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgta 156 |||||||||| ||||||||||||||||||||| |||| |||| |||||||||| ||| Sbjct: 537 actacatacagagcaaaatgagtgaatctacatcataaaatatgactatatacatacgtg 478 Query: 157 tgtagt 162 |||||| Sbjct: 477 tgtagt 472
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtcta 144 |||||||||| ||||||||||||| |||||||||||||| |||||||| Sbjct: 1261 gactacatacggagcaaaatgagtgtatctacactctaaaatatgtcta 1309 Score = 54.0 bits (27), Expect = 5e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 170 tggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 1254 tggaatctctagaaagacttatatt-tgggaacagagggagta 1213 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 cctccgtttctaaatataagtctttt 78 |||||||| ||||||||||||||||| Sbjct: 1372 cctccgttcctaaatataagtctttt 1347
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 |||||| ||| ||| ||||||||| ||||||||||||||| |||| ||| ||| |||||| Sbjct: 45444 gactacgtacgaagtaaaatgagtaaatctacactctaaaatatgactacatatatccgt 45503 Query: 156 atgt 159 |||| Sbjct: 45504 atgt 45507
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 63.9 bits (32), Expect = 5e-07 Identities = 91/108 (84%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 53 cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 112 ||||| |||||||||||||| |||| || |||||| || |||||||||| |||||| Sbjct: 1204 cctccttttctaaatataaggttttttagagatttcattaggagactacatacgaagcaa 1263 Query: 113 aatgagtgaatctacactctaaagtatgtctatatacatccgtatgta 160 ||||| ||||| || | | |||||| |||||||||||||||||||||| Sbjct: 1264 aatga-tgaat-tataatttaaagtgtgtctatatacatccgtatgta 1309
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 60.0 bits (30), Expect = 8e-06 Identities = 125/154 (81%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactac 101 ||||| |||| |||| ||||||||||||||||| |||||| |||| ||| ||| |||| Sbjct: 46 atatactactccctctgtttctaaatataagtcctttaagaaattttactatagg-ctac 104 Query: 102 atacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtag 161 | || ||||||| | |||||||| | |||||| | ||||||||| ||||| ||| || Sbjct: 105 acacggggcaaaataaatgaatctatattctaaaagacgtctatatatatccgaatgcag 164 Query: 162 tc-ctctagtggaatctctaaaaagacttatatt 194 || | ||||||||||||||||| || ||||||| Sbjct: 165 tctttatagtggaatctctaaaaggatttatatt 198
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 119 tgaatctacactctaaagtatgtctatatacatccgtatgtagtc 163 ||||||||||||||||| || ||| ||||| |||||||||||||| Sbjct: 336155 tgaatctacactctaaaatacgtccatatatatccgtatgtagtc 336111 Score = 46.1 bits (23), Expect = 0.13 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 55 tccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaaa 114 |||||| ||||||||||||||||| || |||||| | | |||||||||| | || |||| Sbjct: 260165 tccgttcctaaatataagtctttttagagatttcaat-atggactacatatagagaaaaa 260223 Query: 115 tgagtga 121 ||||||| Sbjct: 260224 tgagtga 260230 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 aatctctaaaaagacttatatt 194 |||||||||||||||||||||| Sbjct: 260196 aatctctaaaaagacttatatt 260175 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 aatctctaaaaagacttatatt 194 |||||||||||||||||||||| Sbjct: 259935 aatctctaaaaagacttatatt 259914
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 56.0 bits (28), Expect = 1e-04 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacataca 106 ||||| ||||||| ||||||||||||||||||||| ||||| |||| | ||| ||| Sbjct: 637 gtactccctccgtatctaaatataagtcttttaagatatttcactaagtgtctatatatg 696 Query: 107 aagcaaaatgagtgaatcta 126 |||||||| ||||||||||| Sbjct: 697 aagcaaaa-gagtgaatcta 715
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 155 ||||||||||| | ||||||| |||||||| | |||||| |||||||| |||||||| | Sbjct: 1018 gactacatacagaataaaatgaatgaatctatattctaaaatatgtctacatacatccat 1077 Query: 156 atgt 159 |||| Sbjct: 1078 atgt 1081
>dbj|D50641.1| Hordeum vulgare DNA for plant metallothionein-like protein, complete cds Length = 1819 Score = 56.0 bits (28), Expect = 1e-04 Identities = 95/116 (81%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacataca 106 ||||| ||||||||| ||||||||||||||| | ||||| | | | | |||||||| Sbjct: 317 gtactccctccgtttttaaatataagtctttataaagattt-tattatgaactacatatg 375 Query: 107 aagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagt 162 ||||||||||| ||| | || || |||| ||||||||||||||||||||| |||| Sbjct: 376 aagcaaaatgattgattttatacattaaaatatgtctatatacatccgtatatagt 431
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatat 69 ||||||||||||||||||||||||||| Sbjct: 35104 tatagtacttcctccgtttctaaatat 35078
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 97 actacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacat 151 ||||||||| | |||||||| ||||| ||||| ||||| ||||||||||||||| Sbjct: 482 actacatacggaacaaaatgaatgaatgtacacgctaaaatatgtctatatacat 428
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatat 69 ||||||||||||||||||||||||||| Sbjct: 24233995 tatagtacttcctccgtttctaaatat 24233969 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||||||||||||||||||||| Sbjct: 18119559 atagtacttcctccgtttctaaatat 18119534 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttc 62 ||||||||||||||||||||||| Sbjct: 10870233 atatatagtacttcctccgtttc 10870255 Score = 46.1 bits (23), Expect = 0.13 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaaca 217 |||||||||||||| |||||||||||||||| Sbjct: 7859074 cttatattatggga-cggagggagtaaaaca 7859045 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttct 63 |||||||||||||||||||||| Sbjct: 19787939 atatagtacttcctccgtttct 19787918 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 18448611 tacttcctccgtttctaaatat 18448590 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 18369594 tacttcctccgtttctaaatat 18369573 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 6582953 tacttcctccgtttctaaatat 6582974 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagta 212 |||||||||||||| ||||||||||| Sbjct: 4592814 cttatattatgggatcggagggagta 4592839 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatat 69 ||||||| |||| ||||||||||||||||| Sbjct: 2885902 atatatattactccctccgtttctaaatat 2885873 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||| |||||||||||||||| Sbjct: 28286739 cttatattatgg-aacggagggagtaaaa 28286712 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 21517166 agtacttcctccgtttcacaatataagtc 21517194 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttc 62 |||||||||||||||| |||||||| Sbjct: 6395448 atatatatagtacttcgtccgtttc 6395424 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatat 69 |||||| ||||||||||||||||| Sbjct: 26584492 agtactccctccgtttctaaatat 26584515 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 41 tatatagtacttcctccgtttctaaatataag 72 |||||| ||||||||||||||| ||| ||||| Sbjct: 26080497 tatatactacttcctccgtttcaaaacataag 26080528 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 4426299 gtacttcctccgtttcataatataagtc 4426272
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatat 69 ||||||||||||||||||||||||||| Sbjct: 24545664 tatagtacttcctccgtttctaaatat 24545638 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||||||||||||||||||||| Sbjct: 18283417 atagtacttcctccgtttctaaatat 18283442 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttc 62 ||||||||||||||||||||||| Sbjct: 10949422 atatatagtacttcctccgtttc 10949444 Score = 46.1 bits (23), Expect = 0.13 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaaca 217 |||||||||||||| |||||||||||||||| Sbjct: 7929161 cttatattatggga-cggagggagtaaaaca 7929132 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttct 63 |||||||||||||||||||||| Sbjct: 20071105 atatagtacttcctccgtttct 20071084 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 18608012 tacttcctccgtttctaaatat 18607991 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 18528995 tacttcctccgtttctaaatat 18528974 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 6649420 tacttcctccgtttctaaatat 6649441 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagta 212 |||||||||||||| ||||||||||| Sbjct: 4614065 cttatattatgggatcggagggagta 4614090 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 4509479 tacttcctccgtttctaaatat 4509458 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatat 69 ||||||| |||| ||||||||||||||||| Sbjct: 2894933 atatatattactccctccgtttctaaatat 2894904 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||| |||||||||||||||| Sbjct: 28271316 cttatattatgg-aacggagggagtaaaa 28271289 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 21827365 agtacttcctccgtttcacaatataagtc 21827393 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttc 62 |||||||||||||||| |||||||| Sbjct: 6461915 atatatatagtacttcgtccgtttc 6461891 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatat 69 |||||| ||||||||||||||||| Sbjct: 26909756 agtactccctccgtttctaaatat 26909779 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 41 tatatagtacttcctccgtttctaaatataag 72 |||||| ||||||||||||||| ||| ||||| Sbjct: 26399193 tatatactacttcctccgtttcaaaacataag 26399224 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 4434993 gtacttcctccgtttcataatataagtc 4434966
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatataagt 73 ||||||||||||||||||||| ||||||||| Sbjct: 21159 tatagtacttcctccgtttcttaatataagt 21129
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 97 actacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgta 156 ||||||||| || ||||| ||||||| || ||| |||| |||||||||||||||| ||| Sbjct: 30750 actacatacgaaacaaaacaagtgaatatatactttaaaatatgtctatatacatctgta 30809 Query: 157 tgtagt 162 | |||| Sbjct: 30810 tatagt 30815
>gb|AC124150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0001I22, complete sequence Length = 162413 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||||||||||||||||||||| Sbjct: 118674 atagtacttcctccgtttctaaatat 118699
>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence Length = 157296 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatataagt 73 |||||||||| ||||||||||||||||||| Sbjct: 141249 atagtacttcatccgtttctaaatataagt 141220
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 37 gatatatatagtacttcctccgtttc 62 |||||||||||||||||||||||||| Sbjct: 24929690 gatatatatagtacttcctccgtttc 24929665 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagta 212 |||||||| ||||||||||||||||| Sbjct: 11371751 cttatattttgggaacggagggagta 11371726 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 23224700 tagtactccctccgtttctaaatat 23224724 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 14156425 agtacttcctccgtttcacaatataagtc 14156453 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 12285315 agtacttcctccgtttcacaatataagtc 12285343 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaa 214 ||||||||||||| |||||||||||||| Sbjct: 27080981 cttatattatggg-acggagggagtaaa 27080955 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatat 69 |||||| ||||||||||||||||| Sbjct: 14027531 agtactccctccgtttctaaatat 14027508 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttctaaatataagtcttt 77 ||||||| | ||||||||||||||| |||||||| |||| Sbjct: 11301621 atatataaaatacttcctccgtttcataatataagacttt 11301582 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaata 68 ||||||||||||||| |||||||| Sbjct: 1237420 tagtacttcctccgtctctaaata 1237397
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 97 actacatacaaagcaaaatgagtgaatctacactctaaagtatgtctata 146 ||||||||| ||||||||||||||||| |||||||| | || ||||||| Sbjct: 349 actacatacggagcaaaatgagtgaatccacactctagaatacgtctata 300
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 37 gatatatatagtacttcctccgtttc 62 |||||||||||||||||||||||||| Sbjct: 24857896 gatatatatagtacttcctccgtttc 24857871 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagta 212 |||||||| ||||||||||||||||| Sbjct: 11371422 cttatattttgggaacggagggagta 11371397 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 23152891 tagtactccctccgtttctaaatat 23152915 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 14110705 agtacttcctccgtttcacaatataagtc 14110733 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 12239685 agtacttcctccgtttcacaatataagtc 12239713 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaa 214 ||||||||||||| |||||||||||||| Sbjct: 27006575 cttatattatggg-acggagggagtaaa 27006549 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatat 69 |||||| ||||||||||||||||| Sbjct: 13981811 agtactccctccgtttctaaatat 13981788 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttctaaatataagtcttt 77 ||||||| | ||||||||||||||| |||||||| |||| Sbjct: 11301292 atatataaaatacttcctccgtttcataatataagacttt 11301253 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaata 68 ||||||||||||||| |||||||| Sbjct: 1237420 tagtacttcctccgtctctaaata 1237397
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 37 gatatatatagtacttcctccgtttc 62 |||||||||||||||||||||||||| Sbjct: 35178 gatatatatagtacttcctccgtttc 35203
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 170 tggaatctctaaaaagacttatatt 194 ||||||||||||||||||||||||| Sbjct: 8601 tggaatctctaaaaagacttatatt 8577 Score = 42.1 bits (21), Expect = 2.0 Identities = 65/77 (84%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 119 tgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctc 178 ||||| || |||||| | |||||||| ||||||| ||||||||| | || || |||||| Sbjct: 8625 tgaatgtagactctagaatatgtctacatacatctttatgtagtc-tatattgaaatctc 8683 Query: 179 taaaaa-gacttatatt 194 |||||| |||||||||| Sbjct: 8684 taaaaaagacttatatt 8700
>gb|AC148343.2| Medicago truncatula chromosome 7 BAC clone mth2-70c24, complete sequence Length = 87311 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 ||||||||||||||||||||||||| Sbjct: 25734 tacttcctccgtttctaaatataag 25758
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtc 74 ||||||||||||||||||||| |||||||||| Sbjct: 19961063 atatagtacttcctccgtttcacaatataagtc 19961095 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatataa 71 ||||||||||||||||||||||| ||||||| Sbjct: 7920385 atatatagtacttcctccgtttcacaatataa 7920354 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatat 69 ||||||||||||||||||||||| Sbjct: 22150292 gtacttcctccgtttctaaatat 22150314 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 16648081 tacttcctccgtttctaaatat 16648102 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 13894207 tagtactccctccgtttctaaatat 13894183 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 12656605 tagtactccctccgtttctaaatat 12656581 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaa 214 |||||||||||||| ||||||||||||| Sbjct: 20385900 cttatattatggga-cggagggagtaaa 20385926
>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa211K08 Length = 41043 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtc 74 ||||||||||||||||||||| |||||||||| Sbjct: 17702 atatagtacttcctccgtttcacaatataagtc 17734
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 50.1 bits (25), Expect = 0.008 Identities = 66/77 (85%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 119 tgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctc 178 ||||| |||||| || | |||||||||||||||| |||||||| || || || |||||| Sbjct: 17233 tgaatgtacactttagaatatgtctatatacatctttatgtagt-ctatattgaaatctc 17291 Query: 179 t-aaaaagacttatatt 194 | ||||||||||||||| Sbjct: 17292 taaaaaagacttatatt 17308 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 170 tggaatctctaaaaagacttatatt 194 ||||||||||||||||||||||||| Sbjct: 17209 tggaatctctaaaaagacttatatt 17185
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0498F03 Length = 54025 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtc 74 ||||||||||||||||||||| |||||||||| Sbjct: 35211 atatagtacttcctccgtttcacaatataagtc 35243
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtctttta 79 |||| |||||||| |||||||||||||||||| Sbjct: 148724 tactccctccgttcctaaatataagtctttta 148693 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 96 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacat 151 ||||| ||||||||| |||| | |||||||| | | |||| ||||||||||||||| Sbjct: 148610 gactatatacaaagcgaaataaatgaatctataatttaaactatgtctatatacat 148665
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 39 tatatatagtacttcctccgtttc 62 |||||||||||||||||||||||| Sbjct: 20486 tatatatagtacttcctccgtttc 20463
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttctaaatat 69 |||||||||| ||||||||||||||||| Sbjct: 757707 atatagtactccctccgtttctaaatat 757680 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatat 69 ||||||||||||||||||||||| Sbjct: 27983984 gtacttcctccgtttctaaatat 27983962 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttctaaatataagtcttt 77 ||||||||||||| ||||||||| |||||||| |||| Sbjct: 24061256 atatatagtactttctccgtttcacaatataagacttt 24061293 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||| |||||||||| Sbjct: 13062840 tagtacttcctccgtttcacaatataagtc 13062869 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttctaaatataagtcttt 77 ||||| ||||||||||||||||| |||| |||||||| Sbjct: 6834755 atatacagtacttcctccgtttcataatacaagtcttt 6834792 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 acttcctccgtttctaaatat 69 ||||||||||||||||||||| Sbjct: 35400212 acttcctccgtttctaaatat 35400232 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 20909521 tagtactccctccgtttctaaatat 20909545 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 184 agacttatattatgggaacggagggagta 212 |||||||||||||||| |||||||||||| Sbjct: 6687553 agacttatattatggg-acggagggagta 6687580 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tatatagtacttcctccgttt 61 ||||||||||||||||||||| Sbjct: 4483823 tatatagtacttcctccgttt 4483803 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 3625196 cttatattatggga-cggagggagtaaaa 3625223 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaa 214 ||||||||||||| |||||||||||||| Sbjct: 34932037 cttatattatggg-acggagggagtaaa 34932011 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 28007569 gtacttcctccgtttcacaatataagtc 28007596 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 27884860 gtacttcctccgtttcacaatataagtc 27884833 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatataagtct 75 |||||||||||||||||| ||||||||||| Sbjct: 27376785 atagtacttcctccgttttacaatataagtct 27376754 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtcttttaa 80 |||||||||||||||||| ||| ||||||| |||| Sbjct: 27160815 tagtacttcctccgtttcacaatgtaagtctgttaa 27160850 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ctaaaaagacttatattatg 197 |||||||||||||||||||| Sbjct: 15948159 ctaaaaagacttatattatg 15948140 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaa 214 ||||||||||||| |||||||||||||| Sbjct: 15335891 cttatattatggg-acggagggagtaaa 15335865 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 14202350 gtacttcctccgtttcacaatataagtc 14202323 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 tatatatagtacttcctccgtttc 62 ||||||||||||| |||||||||| Sbjct: 6039105 tatatatagtactccctccgtttc 6039128 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ttcctccgtttctaaatataagtc 74 |||||||||||| ||||||||||| Sbjct: 3594091 ttcctccgtttcaaaatataagtc 3594068
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagt 73 |||||| ||||||||||||||||||||| Sbjct: 71594 agtactccctccgtttctaaatataagt 71567
>emb|X58565.1|HVPRP1C H.vulgare mRNA for a pathogenesis-related protein (Hv-1c) Length = 748 Score = 48.1 bits (24), Expect = 0.032 Identities = 60/72 (83%) Strand = Plus / Plus Query: 67 tataagtcttttaagcgatttctctaaaggactacatacaaagcaaaatgagtgaatcta 126 ||||| ||||||||| ||||| ||| ||||||||||| || |||||| ||||||| || Sbjct: 652 tataaatcttttaagagattttactagtggactacatacgaaacaaaataagtgaatgta 711 Query: 127 cactctaaagta 138 ||| ||||||| Sbjct: 712 tactttaaagta 723 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 153 cgtatgtagtcctctagtggaatctctaaaaagacttata 192 |||||||||||| ||||| ||||||| |||||| ||||| Sbjct: 691 cgtatgtagtccactagtaaaatctcttaaaagatttata 652
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.032 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttctaaatat 69 ||||||||| |||||||||||||||||||||| Sbjct: 13660266 atatatata-tacttcctccgtttctaaatat 13660236 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgttt 61 |||||||||||||||||||||| Sbjct: 16570930 atatatagtacttcctccgttt 16570951 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 13660020 tacttcctccgtttctaaatat 13660041 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 5486182 tacttcctccgtttctaaatat 5486161 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 2899868 tacttcctccgtttctaaatat 2899847 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 acggagggagtaaaacacagt 221 ||||||||||||||||||||| Sbjct: 11530319 acggagggagtaaaacacagt 11530339 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 |||||||||||||||||| |||||| Sbjct: 11407246 tagtacttcctccgtttcaaaatat 11407222 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttc 62 ||||||||||||||||||||| Sbjct: 7119646 atatagtacttcctccgtttc 7119666 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatat 69 |||||||||| ||||||||||||| Sbjct: 15913467 agtacttccttcgtttctaaatat 15913490
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||||| |||||||||| Sbjct: 26710278 tatagtacttcctccgtttcacaatataagtc 26710309 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatat 69 ||||||||||||||||||||||| Sbjct: 8036822 gtacttcctccgtttctaaatat 8036800 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttctaaat 67 ||||||||| |||| ||||||||||||||| Sbjct: 9562022 atatatatactactccctccgtttctaaat 9561993 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttctaaat 67 ||||||||||||||||||||| |||| Sbjct: 132509 atatagtacttcctccgtttcgaaat 132484 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 tatatatagtacttcctccgtttctaaat 67 ||||||||||||| |||||||||| |||| Sbjct: 26969333 tatatatagtactccctccgtttcaaaat 26969305 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtc 74 ||||| ||||||||||||||| |||||||||| Sbjct: 24453003 atatattacttcctccgtttcacaatataagtc 24453035 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 41 tatatagtacttcctccgtttctaaatat 69 |||||| |||| ||||||||||||||||| Sbjct: 15261364 tatatactactccctccgtttctaaatat 15261392 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 5595518 agtacttcctccgtttcataatataagtc 5595546 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtcttt 77 ||||||||||||||||| ||| ||||||||| Sbjct: 29606829 agtacttcctccgtttcataatgtaagtcttt 29606798 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatat 69 |||||||||| | ||||||||||||||| Sbjct: 28930562 atatagtactccttccgtttctaaatat 28930589 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaa 214 |||||||||||||| ||||||||||||| Sbjct: 27906698 cttatattatggga-cggagggagtaaa 27906724 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaa 214 |||||||||||||| ||||||||||||| Sbjct: 23670445 cttatattatggga-cggagggagtaaa 23670471 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatat 69 |||||| ||||||||||||||||| Sbjct: 17663039 agtactccctccgtttctaaatat 17663016 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 38 atatatatagtacttcctccgtttctaaatat 69 ||||||||| |||| ||||||||||||||||| Sbjct: 2468436 atatatata-tactccctccgtttctaaatat 2468466
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 38 atatatatagtacttcctccgtttctaaatat 69 |||||||||||||| ||||||||| ||||||| Sbjct: 27589477 atatatatagtactccctccgtttttaaatat 27589508 Score = 46.1 bits (23), Expect = 0.13 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaaca 217 |||||||||||||| |||||||||||||||| Sbjct: 16980316 cttatattatggga-cggagggagtaaaaca 16980287 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatat 69 ||||||||| ||||||||||||||||| Sbjct: 7787941 tatagtactccctccgtttctaaatat 7787915 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtc 74 ||||||||||||||| ||||||||||| Sbjct: 2181179 tacttcctccgtttcaaaatataagtc 2181205 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 28191032 tacttcctccgtttctaaatat 28191053 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||||||| ||||||||||||| Sbjct: 27198744 atagtacttccttcgtttctaaatat 27198719 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 1717382 tacttcctccgtttctaaatat 1717403 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 41 tatatagtacttcctccgtttctaaatat 69 |||||| |||| ||||||||||||||||| Sbjct: 19065433 tatatattactccctccgtttctaaatat 19065461 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 tatatatagtacttcctccgt 59 ||||||||||||||||||||| Sbjct: 14144329 tatatatagtacttcctccgt 14144309 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 5176367 tagtactccctccgtttctaaatat 5176391 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaa 66 |||||||||||||||||||| Sbjct: 29584582 gtacttcctccgtttctaaa 29584563 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatat 69 |||||| ||||||||||||||||| Sbjct: 29177439 agtactccctccgtttctaaatat 29177416 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 19058000 gtacttcctccgtttcacaatataagtc 19057973 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaa 214 |||||||||||||| ||||||||||||| Sbjct: 10333857 cttatattatggga-cggagggagtaaa 10333883 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ctccgtttctaaatataagt 73 |||||||||||||||||||| Sbjct: 8966366 ctccgtttctaaatataagt 8966347 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagt 73 |||||| | ||||||||||||||||||| Sbjct: 4050883 agtactccatccgtttctaaatataagt 4050910 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttc 62 |||||||||||||||||||| Sbjct: 3293005 tatagtacttcctccgtttc 3292986
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 39 tatatatagtacttcctccgtttc 62 |||||||||||||||||||||||| Sbjct: 15906797 tatatatagtacttcctccgtttc 15906774 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 ||||||||||||||| ||||||||||||| Sbjct: 1957893 tacttcctccgtttcataatataagtcttt 1957864 Score = 42.1 bits (21), Expect = 2.0 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 176 ctctaaaaagacttatattatgggaacggagggagta 212 ||||||||| ||||||||| ||| ||||||||||||| Sbjct: 26924218 ctctaaaaatacttatattctgg-aacggagggagta 26924183 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtc 74 ||||| ||||||||||||||| |||||||||| Sbjct: 26090321 atatactacttcctccgtttcacaatataagtc 26090353 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 17993277 tagtactccctccgtttctaaatat 17993301 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 13828824 tagtactccctccgtttctaaatat 13828800 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||||||||| ||||||||||| Sbjct: 4148287 tagtacttcctccatttctaaatat 4148263 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 190 atattatgggaacggagggagtaaaaca 217 ||||||||||| |||||||||||||||| Sbjct: 23575668 atattatggga-cggagggagtaaaaca 23575642 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 acggagggagtaaaacacag 220 |||||||||||||||||||| Sbjct: 14632982 acggagggagtaaaacacag 14633001 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 tatattatgggaacggagggagta 212 |||||||||||||||||| ||||| Sbjct: 8356726 tatattatgggaacggagagagta 8356749
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttctaaatat 69 |||||||||| ||||||||||||||||| Sbjct: 757705 atatagtactccctccgtttctaaatat 757678 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatat 69 ||||||||||||||||||||||| Sbjct: 28075308 gtacttcctccgtttctaaatat 28075286 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttctaaatataagtcttt 77 ||||||||||||| ||||||||| |||||||| |||| Sbjct: 23978725 atatatagtactttctccgtttcacaatataagacttt 23978762 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||| |||||||||| Sbjct: 13059615 tagtacttcctccgtttcacaatataagtc 13059644 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttctaaatataagtcttt 77 ||||| ||||||||||||||||| |||| |||||||| Sbjct: 6832652 atatacagtacttcctccgtttcataatacaagtcttt 6832689 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 acttcctccgtttctaaatat 69 ||||||||||||||||||||| Sbjct: 35490284 acttcctccgtttctaaatat 35490304 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 24725649 cttatattatggga-cggagggagtaaaa 24725676 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 20902550 tagtactccctccgtttctaaatat 20902574 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 184 agacttatattatgggaacggagggagta 212 |||||||||||||||| |||||||||||| Sbjct: 6686766 agacttatattatggg-acggagggagta 6686793 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tatatagtacttcctccgttt 61 ||||||||||||||||||||| Sbjct: 4483938 tatatagtacttcctccgttt 4483918 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 3625307 cttatattatggga-cggagggagtaaaa 3625334 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaa 214 ||||||||||||| |||||||||||||| Sbjct: 35022109 cttatattatggg-acggagggagtaaa 35022083 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 28098893 gtacttcctccgtttcacaatataagtc 28098920 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 27976184 gtacttcctccgtttcacaatataagtc 27976157 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatataagtct 75 |||||||||||||||||| ||||||||||| Sbjct: 27468108 atagtacttcctccgttttacaatataagtct 27468077 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtcttttaa 80 |||||||||||||||||| ||| ||||||| |||| Sbjct: 27252138 tagtacttcctccgtttcacaatgtaagtctgttaa 27252173 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ctaaaaagacttatattatg 197 |||||||||||||||||||| Sbjct: 15942693 ctaaaaagacttatattatg 15942674 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaa 214 ||||||||||||| |||||||||||||| Sbjct: 15330425 cttatattatggg-acggagggagtaaa 15330399 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 14197325 gtacttcctccgtttcacaatataagtc 14197298 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 tatatatagtacttcctccgtttc 62 ||||||||||||| |||||||||| Sbjct: 6038318 tatatatagtactccctccgtttc 6038341 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ttcctccgtttctaaatataagtc 74 |||||||||||| ||||||||||| Sbjct: 3594202 ttcctccgtttcaaaatataagtc 3594179
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtctttt 78 |||||||||||||||| |||||||||||||| Sbjct: 32446627 gtacttcctccgtttcataatataagtctttt 32446596 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 38 atatatatagtacttcctccgttt 61 |||||||||||||||||||||||| Sbjct: 23758311 atatatatagtacttcctccgttt 23758334 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||||| |||||||||| Sbjct: 10240164 tatagtacttcctccgtttcacaatataagtc 10240133 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtcttt 77 |||||||||||||||||||| ||| ||||||||| Sbjct: 30023929 tatagtacttcctccgtttcacaatgtaagtcttt 30023963 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 23667560 tacttcctccgtttctaaatat 23667539 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 20930623 tacttcctccgtttctaaatat 20930602 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 17964354 tacttcctccgtttctaaatat 17964375 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||| ||||||||||||||||| Sbjct: 17875443 atagtactccctccgtttctaaatat 17875418 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 8232232 tacttcctccgtttctaaatat 8232211 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 33216085 cttatattatggga-cggagggagtaaaa 33216112 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 41 tatatagtacttcctccgtttctaaatat 69 ||||||||||| |||||||||||||||| Sbjct: 25884137 tatatagtactctctccgtttctaaatat 25884165 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 21041191 tagtactccctccgtttctaaatat 21041167 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 ||||||||||||| ||||||||||| Sbjct: 19275771 tacttcctccgttcctaaatataag 19275795 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 17964593 tagtactccctccgtttctaaatat 17964569 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatataagtcttt 77 ||||||||||||||||| ||| |||||| |||| Sbjct: 11313534 tagtacttcctccgtttttaattataaggcttt 11313502 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 38 atatatata-gtacttcctccgtttctaaatataagtcttt 77 ||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 8122520 atatatatatgtacttcctctgtttcataatataagtcttt 8122480 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 41 tatatagtacttcctccgtttctaaatat 69 ||||||||||| ||| ||||||||||||| Sbjct: 7098851 tatatagtactcccttcgtttctaaatat 7098823 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gatatatatagtacttcctccgttt 61 ||||||||||||||| ||||||||| Sbjct: 5706178 gatatatatagtactacctccgttt 5706202 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ctaaaaagacttatattatg 197 |||||||||||||||||||| Sbjct: 32446593 ctaaaaagacttatattatg 32446612 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 31543811 gtacttcctccgtttcacaatataagtc 31543784 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagt 73 |||||||||| |||||||||||||||| Sbjct: 30394711 agtacttcctttgtttctaaatataagt 30394684 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataa 71 ||||||||||||||| |||||||| Sbjct: 16347318 tacttcctccgtttcaaaatataa 16347295 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 176 ctctaaaaagacttatattatgggaacggagg 207 ||||||||| ||||||||||| |||||||||| Sbjct: 15235741 ctctaaaaatacttatattat-ggaacggagg 15235771 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatata 70 |||||||||||||||| ||||||| Sbjct: 7011571 gtacttcctccgtttcaaaatata 7011548 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cttcctccgtttctaaatat 69 |||||||||||||||||||| Sbjct: 6430331 cttcctccgtttctaaatat 6430312 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 188 ttatattatgggaacggagggagtaaaa 215 ||||||||||||| |||||||||||||| Sbjct: 6036724 ttatattatggga-cggagggagtaaaa 6036698 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttctaaat 67 |||||||||||| |||||||||| |||| Sbjct: 4212701 atatatagtactccctccgtttcgaaat 4212728 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 38 atatatatagtacttcctccgtttctaaatat 69 ||||||||| |||| ||||||||||||||||| Sbjct: 4091035 atatatata-tactccctccgtttctaaatat 4091065
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 48.1 bits (24), Expect = 0.032 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttctaaatat 69 ||||||||| |||||||||||||||||||||| Sbjct: 129268 atatatata-tacttcctccgtttctaaatat 129238 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 129022 tacttcctccgtttctaaatat 129043
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttctaaatat 69 |||||||||| ||||||||||||||||| Sbjct: 53252 atatagtactccctccgtttctaaatat 53225
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttctaaatat 69 |||||||||| ||||||||||||||||| Sbjct: 143588 atatagtactccctccgtttctaaatat 143561
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 38 atatatatagtacttcctccgtttctaaatat 69 |||||||||||||| ||||||||| ||||||| Sbjct: 31171 atatatatagtactccctccgtttttaaatat 31202
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatataa 71 ||||||||||||||||||||||| ||||||| Sbjct: 33028 atatatagtacttcctccgtttcacaatataa 32997
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||||| |||||||||| Sbjct: 57135 tatagtacttcctccgtttcacaatataagtc 57166
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||||| |||||||||| Sbjct: 112530 tatagtacttcctccgtttcacaatataagtc 112499
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||||| |||||||||| Sbjct: 5974 tatagtacttcctccgtttcacaatataagtc 5943
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 38 atatatatagtacttcctccgttt 61 |||||||||||||||||||||||| Sbjct: 68895 atatatatagtacttcctccgttt 68918
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtctttt 78 |||||||||||||||| |||||||||||||| Sbjct: 108140 gtacttcctccgtttcataatataagtctttt 108109 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ctaaaaagacttatattatg 197 |||||||||||||||||||| Sbjct: 108106 ctaaaaagacttatattatg 108125
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtctttt 78 |||||||||||||||| |||||||||||||| Sbjct: 50020 gtacttcctccgtttcataatataagtctttt 49989 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ctaaaaagacttatattatg 197 |||||||||||||||||||| Sbjct: 49986 ctaaaaagacttatattatg 50005
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||||| |||||||||| Sbjct: 127882 tatagtacttcctccgtttcacaatataagtc 127913
>dbj|AK106777.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-G12, full insert sequence Length = 2557 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtctttt 78 |||||||||||||||| |||||||||||||| Sbjct: 1265 gtacttcctccgtttcataatataagtctttt 1296 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ctaaaaagacttatattatg 197 |||||||||||||||||||| Sbjct: 1299 ctaaaaagacttatattatg 1280
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.032 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttctaaatat 69 ||||||||| |||||||||||||||||||||| Sbjct: 13667608 atatatata-tacttcctccgtttctaaatat 13667578 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgttt 61 |||||||||||||||||||||| Sbjct: 16579171 atatatagtacttcctccgttt 16579192 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 13667362 tacttcctccgtttctaaatat 13667383 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 5486969 tacttcctccgtttctaaatat 5486948 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 2899819 tacttcctccgtttctaaatat 2899798 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 acggagggagtaaaacacagt 221 ||||||||||||||||||||| Sbjct: 11536759 acggagggagtaaaacacagt 11536779 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 |||||||||||||||||| |||||| Sbjct: 11413686 tagtacttcctccgtttcaaaatat 11413662 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttc 62 ||||||||||||||||||||| Sbjct: 7122932 atatagtacttcctccgtttc 7122952 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatat 69 |||||||||| ||||||||||||| Sbjct: 15921708 agtacttccttcgtttctaaatat 15921731
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 46.1 bits (23), Expect = 0.13 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaaca 217 |||||||||||||| |||||||||||||||| Sbjct: 138874 cttatattatggga-cggagggagtaaaaca 138903
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttc 62 ||||||||||||||||||||||| Sbjct: 59753 atatatagtacttcctccgtttc 59775
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatat 69 ||||||||||||||||||||||| Sbjct: 41042 gtacttcctccgtttctaaatat 41064 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 17457 gtacttcctccgtttcacaatataagtc 17430
>gb|AC174360.8| Medicago truncatula clone mth2-31a5, complete sequence Length = 99153 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataag 72 ||||||||||||||||| ||||||||| Sbjct: 15423 agtacttcctccgtttcaaaatataag 15449
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttc 62 ||||||||||||||||||||||| Sbjct: 18714222 atatatagtacttcctccgtttc 18714244 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 29822955 tacttcctccgtttctaaatat 29822934 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||| ||||||||||||||||| Sbjct: 29822713 atagtactccctccgtttctaaatat 29822738 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatataagtcttt 77 ||||||||| ||||||||| ||||||||||||| Sbjct: 21363949 atagtacttgctccgtttcataatataagtcttt 21363916 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtctttt 78 |||||||||||||||||| |||||||| ||||| Sbjct: 19431363 tagtacttcctccgtttcacaatataagactttt 19431396 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 tatatagtacttcctccgtttc 62 |||||||||||||||||||||| Sbjct: 18809305 tatatagtacttcctccgtttc 18809284 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 tatatagtacttcctccgtttc 62 |||||||||||||||||||||| Sbjct: 4837104 tatatagtacttcctccgtttc 4837125 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 1014135 tacttcctccgtttctaaatat 1014156 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 34080867 cttatattatggga-cggagggagtaaaa 34080840 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttc 62 ||||||||||||||||||||| Sbjct: 400023 atatagtacttcctccgtttc 400043 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 35365179 gtacttcctccgtttcacaatataagtc 35365152 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttc 62 |||||||||||||||||||| Sbjct: 25106038 tatagtacttcctccgtttc 25106057 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 185 gacttatattatgggaacggagggagta 212 |||||||||| | ||||||||||||||| Sbjct: 21917433 gacttatatttttggaacggagggagta 21917406 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataag 72 ||||||| ||||||| |||||||||||| Sbjct: 20706136 tagtactccctccgtctctaaatataag 20706163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttc 62 |||||||||||||||||||| Sbjct: 18497710 tatagtacttcctccgtttc 18497691 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtc 74 |||| ||||||||||||||| |||||||||| Sbjct: 18252657 tatattacttcctccgtttcataatataagtc 18252688 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 12716034 gtacttcctccgtttcataatataagtc 12716061 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaa 214 ||||||||| ||| |||||||||||||| Sbjct: 6966695 cttatattagggggacggagggagtaaa 6966668
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttt 77 |||||||||||||||| ||||||||| |||| Sbjct: 34763873 gtacttcctccgtttcaaaatataagacttt 34763843 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatataagtc 74 ||||||| ||||||||||||||| |||||||||| Sbjct: 3075343 atatataatacttcctccgtttcataatataagtc 3075309 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgttt 61 |||||||||||||||||||||| Sbjct: 10058170 atatatagtacttcctccgttt 10058191 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 2514828 tacttcctccgtttctaaatat 2514807 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ttcctccgtttctaaatataa 71 ||||||||||||||||||||| Sbjct: 42091097 ttcctccgtttctaaatataa 42091117 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cttcctccgtttctaaatata 70 ||||||||||||||||||||| Sbjct: 39279716 cttcctccgtttctaaatata 39279696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttc 62 ||||||||||||||||||||| Sbjct: 32189061 atatagtacttcctccgtttc 32189041 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 24266102 agtacttcctccgtttcacaatataagtc 24266074 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 ||||||||||||| ||||||||||| Sbjct: 13968985 tacttcctccgttcctaaatataag 13969009 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 7845913 tagtactccctccgtttctaaatat 7845937 Score = 40.1 bits (20), Expect = 7.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaacac 218 ||||||||||||||| ||||||||||| |||| Sbjct: 35848589 cttatattatgggaa-ggagggagtaagacac 35848559 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 tatatatagtacttcctccgtttc 62 ||||| |||||||||||||||||| Sbjct: 35454968 tatatgtagtacttcctccgtttc 35454945 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 34721347 gtacttcctccgtttcacaatataagtc 34721374 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataa 71 |||| ||||||||||||||||||| Sbjct: 32108926 tactccctccgtttctaaatataa 32108949 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatat 69 |||||| ||||||||||||||||| Sbjct: 31983009 agtactccctccgtttctaaatat 31983032 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatataag 72 ||||||| ||||||| |||||||||||| Sbjct: 31772019 tagtactccctccgtctctaaatataag 31771992 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 26029521 gtacttcctccgtttcacaatataagtc 26029494 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 atatagtacttcctccgttt 61 |||||||||||||||||||| Sbjct: 24844734 atatagtacttcctccgttt 24844715 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtcttt 77 ||||||||||||||||| |||||||| |||| Sbjct: 20369048 agtacttcctccgtttcacaatataagacttt 20369017 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatata 70 |||||||||||||||| ||||||| Sbjct: 10747890 gtacttcctccgtttcaaaatata 10747913 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 8537769 gtacttcctccgtttcacaatataagtc 8537796 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 6104569 gtacttcctccgtttcacaatataagtc 6104542 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 186 acttatattatgggaacggagggagtaa 213 |||||||||||||| ||||||||||||| Sbjct: 4749350 acttatattatggg-acggagggagtaa 4749324
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttc 62 ||||||||||||||||||||||| Sbjct: 63360 atatatagtacttcctccgtttc 63382 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 tatatagtacttcctccgtttc 62 |||||||||||||||||||||| Sbjct: 158468 tatatagtacttcctccgtttc 158447
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1148D12 Length = 132060 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttt 77 |||||||||||||||| ||||||||| |||| Sbjct: 79113 gtacttcctccgtttcaaaatataagacttt 79083 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataagtc 74 |||||||||||||||| |||||||||| Sbjct: 36587 gtacttcctccgtttcacaatataagtc 36614
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454H12 Length = 161004 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataagtcttt 77 |||||||||||||||| ||||||||| |||| Sbjct: 23045 gtacttcctccgtttcaaaatataagacttt 23015
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtcttt 77 |||||||||||||||||||| ||| ||||||||| Sbjct: 3526 tatagtacttcctccgtttcacaatgtaagtcttt 3560
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatat 69 ||||||||||||||||||||||| Sbjct: 71785 gtacttcctccgtttctaaatat 71807
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtc 74 ||||||||||||||| ||||||||||| Sbjct: 40636 tacttcctccgtttcaaaatataagtc 40662
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatataagtc 74 ||||||| ||||||||||||||| |||||||||| Sbjct: 19131 atatataatacttcctccgtttcataatataagtc 19097
>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1423D04 Length = 154474 Score = 46.1 bits (23), Expect = 0.13 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaaca 217 |||||||||||||| |||||||||||||||| Sbjct: 113338 cttatattatggga-cggagggagtaaaaca 113309
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatat 69 ||||||||| ||||||||||||||||| Sbjct: 2323 tatagtactccctccgtttctaaatat 2297
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 43 tatagtacttcctccgtttctaaatat 69 ||||||||| ||||||||||||||||| Sbjct: 100439 tatagtactccctccgtttctaaatat 100413
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataagtcttt 77 |||||||||||||||||||| ||| ||||||||| Sbjct: 124205 tatagtacttcctccgtttcacaatgtaagtcttt 124239
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatat 69 ||||||||||||||||||||||| Sbjct: 75019 gtacttcctccgtttctaaatat 74997
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatataagtc 74 ||||||| ||||||||||||||| |||||||||| Sbjct: 43383 atatataatacttcctccgtttcataatataagtc 43349
>gb|AC154113.1| Medicago truncatula chromosome 2 BAC clone mte1-25a23, complete sequence Length = 42983 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataag 72 ||||| |||||||||||||||||||| Sbjct: 17767 gtactccctccgtttctaaatataag 17742
>gb|DQ157462.1| Oryza sativa (indica cultivar-group) strain Suphan Buri 1 Hd3a gene, complete cds Length = 3836 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 2232 tacttcctccgtttctaaatat 2253
>gb|DQ157461.1| Oryza sativa (indica cultivar-group) strain KDML 105 Hd3a gene, complete cds Length = 3836 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 2232 tacttcctccgtttctaaatat 2253
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagtcttt 77 ||||||||||||||| ||||||||||||| Sbjct: 24652 tacttcctccgtttcataatataagtcttt 24681 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 18528 agtacttcctccgtttcacaatataagtc 18500
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 37597 tacttcctccgtttctaaatat 37618
>gb|AY021582.1| Oryza sativa microsatellite MRG3907 containing (TA)X29, closest to marker RM111, genomic sequence Length = 258 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 6 tacttcctccgtttctaaatat 27
>gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0084A20, complete sequence Length = 139391 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatat 69 ||||||| |||| ||||||||||||||||| Sbjct: 26715 atatatattactccctccgtttctaaatat 26686
>gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040G18, complete sequence Length = 172281 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 162314 tacttcctccgtttctaaatat 162335 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagta 212 |||||||||||||| ||||||||||| Sbjct: 57728 cttatattatgggatcggagggagta 57703
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgtttctaaatataagtcttt 77 ||||||||||||| ||||||||| |||||||| |||| Sbjct: 30229 atatatagtactttctccgtttcacaatataagacttt 30192
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttct 63 |||||||||||||||||||||| Sbjct: 140823 atatagtacttcctccgtttct 140802
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttct 63 |||||||||||||||||||||| Sbjct: 26448 atatagtacttcctccgtttct 26427
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 104959 tacttcctccgtttctaaatat 104938
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 ||||||||||||||| ||||||||||||| Sbjct: 50770 tacttcctccgtttcataatataagtcttt 50741
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 27926 tacttcctccgtttctaaatat 27905
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataag 72 ||||||||||||| |||||||||||| Sbjct: 71922 gtacttcctccgtatctaaatataag 71947
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatataagtcttt 77 ||||||||| ||||||||| ||||||||||||| Sbjct: 13699 atagtacttgctccgtttcataatataagtcttt 13666
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataag 72 ||||| |||||||||||||||||||| Sbjct: 123748 gtactccctccgtttctaaatataag 123723
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagt 73 |||| ||||||||||||||||||||| Sbjct: 35300 tactccctccgtttctaaatataagt 35325
>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence Length = 123953 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagt 73 |||| ||||||||||||||||||||| Sbjct: 76105 tactccctccgtttctaaatataagt 76130 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataa 71 |||||| ||||||||||||||||| Sbjct: 76253 tacttcatccgtttctaaatataa 76230
>gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete sequence Length = 112241 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataag 72 ||||||||||||||| |||||||||| Sbjct: 1631 gtacttcctccgtttttaaatataag 1606
>gb|AC145061.27| Medicago truncatula clone mth2-6a18, complete sequence Length = 139522 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagt 73 |||| ||||||||||||||||||||| Sbjct: 122377 tactccctccgtttctaaatataagt 122402
>gb|AC152347.14| Medicago truncatula clone mth2-28c12, complete sequence Length = 112461 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataag 72 ||||||||||||||| |||||||||| Sbjct: 111447 gtacttcctccgtttttaaatataag 111422
>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence Length = 128267 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagt 73 ||||||||||||| |||||||||||| Sbjct: 80049 tacttcctccgttcctaaatataagt 80024
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 atatatagtacttcctccgttt 61 |||||||||||||||||||||| Sbjct: 89312 atatatagtacttcctccgttt 89291
>emb|CR933498.1|OSJN00303 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1168G10, complete sequence Length = 142295 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 tatatagtacttcctccgtttc 62 |||||||||||||||||||||| Sbjct: 15766 tatatagtacttcctccgtttc 15787
>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21, complete sequence Length = 143093 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 tatatagtacttcctccgtttc 62 |||||||||||||||||||||| Sbjct: 25215 tatatagtacttcctccgtttc 25194
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtctttt 78 |||||||||||||||||| |||||||| ||||| Sbjct: 84927 tagtacttcctccgtttcacaatataagactttt 84960
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 93854 tacttcctccgtttctaaatat 93875
>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10 Length = 87503 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatataag 72 ||||||||| |||| ||||||||||||||| Sbjct: 59511 tatagtactccctctgtttctaaatataag 59540
>gb|AF494453.1| Oryza sativa (japonica cultivar-group) telomerase reverse transcriptase (TERT) gene, complete cds Length = 17280 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagta 212 |||||||| ||||||||||||||||| Sbjct: 6871 cttatattttgggaacggagggagta 6896
>gb|DQ445145.1| Beta vulgaris chromosome 9 clone BAC33 genomic sequence Length = 19043 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaata 68 |||||||||||||||||||||| Sbjct: 675 gtacttcctccgtttctaaata 654 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaata 68 ||||||||||||||||||||| Sbjct: 412 tacttcctccgtttctaaata 432
>gb|DQ374087.1| Beta vulgaris chromosome 9 clone BAC33 genomic sequence Length = 99090 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgttt 61 |||||||||||||||||||||| Sbjct: 12141 atatatagtacttcctccgttt 12162
>gb|AC151822.29| Medicago truncatula clone mth2-32h21, complete sequence Length = 118094 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagt 73 |||||||||||||| ||||||||||| Sbjct: 32547 tacttcctccgtttttaaatataagt 32572
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataagt 73 |||| ||||||||||||||||||||| Sbjct: 73666 tactccctccgtttctaaatataagt 73691
>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic sequence, complete sequence Length = 138826 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 42163 tacttcctccgtttctaaatat 42184
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 57466 tacttcctccgtttctaaatat 57487
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 80900 tacttcctccgtttctaaatat 80879
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 ||||||||||||||| ||||||||||||| Sbjct: 20489993 tacttcctccgtttcataatataagtcttt 20489964 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 9087763 tacttcctccgtttctaaatat 9087742 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 27532559 cttatattatggga-cggagggagtaaaa 27532586 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||||||||||||| ||||||| Sbjct: 79130 tagtacttcctccgtttataaatat 79106 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 atatagtacttcctccgttt 61 |||||||||||||||||||| Sbjct: 25668077 atatagtacttcctccgttt 25668096 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtct 75 ||||||||||||||| ||||||||||| Sbjct: 20372149 tacttcctccgtttcacaatataagtct 20372122 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 tatagtacttcctccgtttctaaatata 70 |||||||||||||| ||||| ||||||| Sbjct: 4686860 tatagtacttcctctgtttcaaaatata 4686887 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 185 gacttatattatgggaacggagggagta 212 |||||||||||||| ||||||||||||| Sbjct: 3387702 gacttatattatgg-aacggagggagta 3387676 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatat 69 |||||||| ||||||||||||||| Sbjct: 3086917 agtacttcatccgtttctaaatat 3086894 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 tatatatagtacttcctccgtttc 62 ||||||| |||||||||||||||| Sbjct: 1771741 tatatatggtacttcctccgtttc 1771764
>gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene cluster, complete sequence Length = 10607 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataag 72 |||||||||||||||| ||||||||| Sbjct: 8554 gtacttcctccgtttcaaaatataag 8529
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 69249 tacttcctccgtttctaaatat 69228
>gb|AY345016.1| Philine aperta cytochrome oxidase subunit I gene, partial cds; and tRNA-Val and large subunit ribosomal RNA genes, complete sequence; mitochondrial Length = 2434 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 554 agaaggagaagaaaagctgtga 575 |||||||||||||||||||||| Sbjct: 544 agaaggagaagaaaagctgtga 523
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttctaaatataagtcttt 77 ||||| ||||||||||||||||| |||| |||||||| Sbjct: 30690 atatacagtacttcctccgtttcataatacaagtcttt 30727
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgtttctaaatataagtcttt 77 ||||| ||||||||||||||||| |||| |||||||| Sbjct: 1352 atatacagtacttcctccgtttcataatacaagtcttt 1389
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 atatatagtacttcctccgttt 61 |||||||||||||||||||||| Sbjct: 5639 atatatagtacttcctccgttt 5660
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||| |||||||||| Sbjct: 140538 tagtacttcctccgtttcacaatataagtc 140567
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Minus Query: 110 caaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtc 163 |||||||||||||| |||| |||||| || || || |||||||| |||||||| Sbjct: 54227 caaaatgagtgaatttacaatctaaaatacgtgtacatacatccagatgtagtc 54174 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ttcctccgtttctaaatataagtc 74 ||||| |||||||||||||||||| Sbjct: 54285 ttccttcgtttctaaatataagtc 54262
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 98073 tacttcctccgtttctaaatat 98052
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 120553 tacttcctccgtttctaaatat 120574
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 tttctaaatataagtcttttaa 80 |||||||||||||||||||||| Sbjct: 666993 tttctaaatataagtcttttaa 667014
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 42531 tacttcctccgtttctaaatat 42552
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10 Length = 175754 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 121938 tacttcctccgtttctaaatat 121959
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||||||| ||||||||||||| Sbjct: 55760 atagtacttccttcgtttctaaatat 55735
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 56220 tacttcctccgtttctaaatat 56241
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 64378 tacttcctccgtttctaaatat 64357
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 54095 tacttcctccgtttctaaatat 54074
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1059D01 Length = 158792 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttctaaat 67 ||||||||| |||| ||||||||||||||| Sbjct: 69752 atatatatactactccctccgtttctaaat 69723
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 42 atatagtacttcctccgtttctaaat 67 ||||||||||||||||||||| |||| Sbjct: 131808 atatagtacttcctccgtttcgaaat 131783
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 98987 tacttcctccgtttctaaatat 99008 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||| ||||||||||||||||| Sbjct: 10076 atagtactccctccgtttctaaatat 10051 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 99226 tagtactccctccgtttctaaatat 99202
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 25948 tacttcctccgtttctaaatat 25969 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 26187 tagtactccctccgtttctaaatat 26163
>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654A08 Length = 154812 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||| ||||||||||||||||| Sbjct: 114974 atagtactccctccgtttctaaatat 114949
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 108660 tacttcctccgtttctaaatat 108639
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 8903 tacttcctccgtttctaaatat 8882
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 23257 tacttcctccgtttctaaatat 23236
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtcttt 77 ||||||||||||||| ||||||||||||| Sbjct: 120623 tacttcctccgtttcataatataagtcttt 120594 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagtct 75 ||||||||||||||| ||||||||||| Sbjct: 2779 tacttcctccgtttcacaatataagtct 2752
>dbj|AK120281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049I08, full insert sequence Length = 4359 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatataagtc 74 |||||||||||||||||| |||||||||| Sbjct: 3533 tagtacttcctccgtttcacaatataagtc 3504
>emb|AJ512944.1|HVU512944 Hordeum vulgare cor14b gene for cold regulated protein Length = 1395 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataag 72 ||||| |||||||||||||||||||| Sbjct: 1368 gtactccctccgtttctaaatataag 1393
>gb|AF085168.1|AF085168 Triticum aestivum receptor-like protein kinase pesudogene sequence Length = 3822 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 127 cactctaaagtatgtctatatacatccgtatgtagtcc 164 ||||||||| | |||||||||||||||||| |||||| Sbjct: 3558 cactctaaaatccgtctatatacatccgtatctagtcc 3595
>emb|CR962123.2| Medicago truncatula chromosome 5 clone mth2-167a19, COMPLETE SEQUENCE Length = 128818 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 agtacttcctccgtttctaaatataa 71 |||||| ||||||||||||||||||| Sbjct: 53875 agtactccctccgtttctaaatataa 53850
>emb|CT573051.1| Medicago truncatula chromosome 5 clone mth2-15e15, COMPLETE SEQUENCE Length = 117939 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataagt 73 |||||||||||| ||||||||||||| Sbjct: 115192 tacttcctccgtatctaaatataagt 115167
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagta 212 |||||||| ||||||||||||||||| Sbjct: 165213 cttatattttgggaacggagggagta 165238
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 103881 tacttcctccgtttctaaatat 103860 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 atagtacttcctccgtttctaaatat 69 |||||||| ||||||||||||||||| Sbjct: 103639 atagtactccctccgtttctaaatat 103664
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagta 212 |||||||| ||||||||||||||||| Sbjct: 303 cttatattttgggaacggagggagta 328 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 38 atatatatagtacttcctccgtttctaaatataagtcttt 77 ||||||| | ||||||||||||||| |||||||| |||| Sbjct: 70433 atatataaaatacttcctccgtttcataatataagacttt 70472
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataag 72 ||||| |||||||||||||||||||| Sbjct: 602 gtactccctccgtttctaaatataag 627
>dbj|AB052941.1| Oryza sativa (indica cultivar-group) Hd3a gene, complete cds, cultivar:Kasalath Length = 4229 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatat 69 |||||||||||||||||||||| Sbjct: 2500 tacttcctccgtttctaaatat 2521
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 atatatatagtacttcctccgtttc 62 |||||||||||||||| |||||||| Sbjct: 66842 atatatatagtacttcgtccgtttc 66818
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||| |||||||||||||||| Sbjct: 91539 cttatattatgg-aacggagggagtaaaa 91512
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||| |||||||||||||||| Sbjct: 13420 cttatattatgg-aacggagggagtaaaa 13393
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtc 74 ||||| ||||||||||||||| |||||||||| Sbjct: 115082 atatactacttcctccgtttcacaatataagtc 115114
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||||||||| ||||||||||| Sbjct: 34766 tagtacttcctccatttctaaatat 34742
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 28604 tagtactccctccgtttctaaatat 28628
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 94896 tagtactccctccgtttctaaatat 94872
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 42.1 bits (21), Expect = 2.0 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 176 ctctaaaaagacttatattatgggaacggagggagta 212 ||||||||| ||||||||| ||| ||||||||||||| Sbjct: 76650 ctctaaaaatacttatattctgg-aacggagggagta 76615
>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09, complete sequence Length = 158472 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||| ||||||||||||||||| Sbjct: 46326 tagtactccctccgtttctaaatat 46302
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 42 atatagtacttcctccgtttctaaatataagtc 74 ||||| ||||||||||||||| |||||||||| Sbjct: 7661 atatactacttcctccgtttcacaatataagtc 7693
>gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete sequence Length = 121741 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataa 71 ||||||||| ||||||||||||||| Sbjct: 18064 gtacttccttcgtttctaaatataa 18040
>emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1, COMPLETE SEQUENCE Length = 139651 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 ||||||||||||||| ||||||||| Sbjct: 47955 tacttcctccgtttcaaaatataag 47979
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 37579 cttatattatggga-cggagggagtaaaa 37606
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05, complete sequence Length = 127946 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 184 agacttatattatgggaacggagggagta 212 |||||||||||||||| |||||||||||| Sbjct: 73101 agacttatattatggg-acggagggagta 73128
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 agtacttcctccgtttctaaatataagtc 74 ||||||||||||||||| |||||||||| Sbjct: 40685 agtacttcctccgtttcacaatataagtc 40713
>gb|AC133139.23| Medicago truncatula clone mth1-8d23, complete sequence Length = 121016 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 91312 tactccctccgtttctaaatataag 91288
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataag 72 ||||||||| ||||||||||||||| Sbjct: 40661 tacttcctctgtttctaaatataag 40637
>gb|AC152406.8| Medicago truncatula clone mth2-71o20, complete sequence Length = 114919 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataa 71 ||||||||||||| ||||||||||| Sbjct: 74951 gtacttcctccgtatctaaatataa 74975
>gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete sequence Length = 119096 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatataag 72 |||||||| | |||||||||||||||||| Sbjct: 87952 atagtactccttccgtttctaaatataag 87924
>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence Length = 152468 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 65081 tactccctccgtttctaaatataag 65057
>gb|AC151424.15| Medicago truncatula clone mth2-101c17, complete sequence Length = 137117 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 44 atagtacttcctccgtttctaaatataag 72 |||||||||||||||||| ||||||||| Sbjct: 80722 atagtacttcctccgttttgaaatataag 80750
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataag 72 ||||||||| ||||||||||||||| Sbjct: 20542 tacttcctctgtttctaaatataag 20518
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 gtacttcctccgtttctaaatataa 71 ||||| ||||||||||||||||||| Sbjct: 93089 gtactccctccgtttctaaatataa 93065
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataa 71 ||||| ||||||||||||||||||| Sbjct: 88383 gtactccctccgtttctaaatataa 88407 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 acttcctccgtttctaaatataag 72 ||||||||||||| |||||||||| Sbjct: 75522 acttcctccgtttttaaatataag 75545
>gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete sequence Length = 114611 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataa 71 ||||||||| ||||||||||||||| Sbjct: 91143 gtacttccttcgtttctaaatataa 91167
>gb|AC122727.24| Medicago truncatula clone mth2-13b8, complete sequence Length = 128564 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 37252 tactccctccgtttctaaatataag 37276
>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence Length = 92189 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 44 atagtacttcctccgtttctaaatataag 72 |||||||| | |||||||||||||||||| Sbjct: 26676 atagtactccttccgtttctaaatataag 26648
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 23846 tactccctccgtttctaaatataag 23870
>gb|AC140721.15| Medicago truncatula clone mth2-16c16, complete sequence Length = 128119 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataa 71 ||||||||| ||||||||||||||| Sbjct: 72689 gtacttccttcgtttctaaatataa 72713
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence Length = 115857 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 107500 tactccctccgtttctaaatataag 107476 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 107352 tactccctccgtttctaaatataag 107376
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE Length = 128654 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 100765 tactccctccgtttctaaatataag 100789
>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, two novel genes, a pseudogene similar to part of heat shock 90kD protein 1, beta (HSPCB) and a CpG island, complete sequence Length = 178362 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 gtttctaaatataagtctttt 78 ||||||||||||||||||||| Sbjct: 110506 gtttctaaatataagtctttt 110486
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 131762 cttatattatggga-cggagggagtaaaa 131735
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 160 agtcctctagtggaatctctaaaaagacttatattatgggaacggagggagta 212 ||||| ||| || ||| |||||||||||||||||| | |||||||| |||||| Sbjct: 1957 agtcccctattgaaatgtctaaaaagacttatatt-taggaacggatggagta 1906 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tccgtttctaaatataagtctttt 78 |||||| ||||||||||||||||| Sbjct: 1913 tccgttcctaaatataagtctttt 1936
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tagtacttcctccgtttctaaatat 69 ||||||||||||| ||||||||||| Sbjct: 122981 tagtacttcctccatttctaaatat 122957
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 cttcctccgtttctaaatata 70 ||||||||||||||||||||| Sbjct: 81422 cttcctccgtttctaaatata 81402
>gb|AC158172.17| Medicago truncatula clone mth2-143b6, complete sequence Length = 117641 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaata 68 ||||||||||||||||||||| Sbjct: 74596 tacttcctccgtttctaaata 74576
>gb|DQ374025.1| Beta vulgaris chromosome 9 clone BAC62 genomic sequence Length = 5268 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaata 68 ||||||||||||||||||||| Sbjct: 2154 tacttcctccgtttctaaata 2134 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaata 68 ||||||||||||||||||||| Sbjct: 1892 tacttcctccgtttctaaata 1912
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 123104 tactccctccgtttctaaatataag 123128
>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence Length = 100341 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 tacttcctccgtttctaaatataag 72 |||| |||||||||||||||||||| Sbjct: 87234 tactccctccgtttctaaatataag 87210
>gb|AC146722.16| Medicago truncatula clone mth2-23c16, complete sequence Length = 121968 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 gtacttcctccgtttctaaatataa 71 ||||||||||||||| ||||||||| Sbjct: 87070 gtacttcctccgtttataaatataa 87094
>gb|AC147178.6| Medicago truncatula clone mth2-142i4, complete sequence Length = 114693 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 tacttcctccgtttctaaatataag 72 |||||| |||||||||||||||||| Sbjct: 104417 tacttcatccgtttctaaatataag 104441
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 187 cttatattatgggaacggagggagtaaaa 215 |||||||||||||| |||||||||||||| Sbjct: 104338 cttatattatggga-cggagggagtaaaa 104365 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,052,768 Number of Sequences: 3902068 Number of extensions: 5052768 Number of successful extensions: 123827 Number of sequences better than 10.0: 432 Number of HSP's better than 10.0 without gapping: 462 Number of HSP's successfully gapped in prelim test: 44 Number of HSP's that attempted gapping in prelim test: 110031 Number of HSP's gapped (non-prelim): 13972 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
