ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3p19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamm... 154 2e-37
2CRY1_ARATH (Q43125) Cryptochrome-1 (Blue light photoreceptor) 30 4.9

>KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamma subunit 1|
           (AKIN gamma1) (AKING1)
          Length = 424

 Score =  154 bits (390), Expect = 2e-37
 Identities = 73/105 (69%), Positives = 90/105 (85%)
 Frame = +1

Query: 172 SPEAEIGHRVEDLWEVAQPQLSPSEKLNSCFEDIPVAAFPRNHPSQVIEIPSDASLADTV 351
           SPEA++G RVEDLW+  +PQLSP+EKLN+CFE IPV+AFP +  SQ IEI SD SLA+ V
Sbjct: 23  SPEAKLGMRVEDLWDEQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAV 82

Query: 352 ETLSKNKILSAPIRNVDAPEDATWIDKYIGIVEFAGIAMWLLHQV 486
           +TLSK K+LSAP+ +VDAPEDA+WID+YIGIVEF GI +WLLHQ+
Sbjct: 83  QTLSKFKVLSAPVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQL 127



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>CRY1_ARATH (Q43125) Cryptochrome-1 (Blue light photoreceptor)|
          Length = 681

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 415 HPLEHRRFLWVHSKFYFWIMSQQYQQGW 332
           HP  H R L  H KF+ W + + Y + W
Sbjct: 307 HPYSHERPLLGHLKFFPWAVDENYFKAW 334


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,388,678
Number of Sequences: 219361
Number of extensions: 1348833
Number of successful extensions: 3727
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3727
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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