ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3p16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 955 bits (482), Expect = 0.0 Identities = 482/482 (100%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119488 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 119429 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119428 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 119369 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119368 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 119309 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119308 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 119249 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119248 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 119189 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119188 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 119129 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119128 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 119069 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119068 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 119009 Query: 493 ta 494 || Sbjct: 119008 ta 119007 Score = 955 bits (482), Expect = 0.0 Identities = 482/482 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95406 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 95465 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95466 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 95525 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95526 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 95585 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95586 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 95645 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95646 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 95705 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95706 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 95765 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95766 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 95825 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95826 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 95885 Query: 493 ta 494 || Sbjct: 95886 ta 95887
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118269 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 118210 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118209 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 118150 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118149 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 118090 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118089 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 118030 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118029 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 117970 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117969 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 117910 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117909 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 117850 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117849 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 117790 Query: 493 ta 494 || Sbjct: 117789 ta 117788
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119353 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 119294 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119293 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 119234 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119233 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 119174 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119173 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 119114 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119113 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 119054 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119053 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 118994 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118993 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 118934 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118933 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118874 Query: 493 ta 494 || Sbjct: 118873 ta 118872 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95803 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 95862 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95863 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 95922 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95923 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 95982 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95983 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 96042 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96043 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 96102 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96103 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 96162 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96163 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 96222 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96223 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 96282 Query: 493 ta 494 || Sbjct: 96283 ta 96284
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119353 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 119294 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119293 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 119234 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119233 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 119174 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119173 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 119114 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119113 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 119054 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119053 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 118994 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118993 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 118934 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118933 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118874 Query: 493 ta 494 || Sbjct: 118873 ta 118872 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95803 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 95862 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95863 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 95922 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95923 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 95982 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95983 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 96042 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96043 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 96102 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96103 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 96162 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96163 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 96222 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96223 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 96282 Query: 493 ta 494 || Sbjct: 96283 ta 96284
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119302 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 119243 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119242 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 119183 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119182 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 119123 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119122 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 119063 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119062 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 119003 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119002 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 118943 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118942 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 118883 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118882 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118823 Query: 493 ta 494 || Sbjct: 118822 ta 118821 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 95807 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95808 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 95867 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95868 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 95927 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95928 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 95987 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95988 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 96047 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96048 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 96107 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96108 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 96167 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96168 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 96227 Query: 493 ta 494 || Sbjct: 96228 ta 96229
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508381 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 31508440 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508441 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 31508500 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508501 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 31508560 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508561 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 31508620 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508621 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 31508680 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508681 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 31508740 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508741 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 31508800 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508801 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 31508860 Query: 493 ta 494 || Sbjct: 31508861 ta 31508862 Score = 155 bits (78), Expect = 2e-34 Identities = 78/78 (100%) Strand = Plus / Minus Query: 417 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 477 aatgaccgctcagtgata 494 |||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgata 11513240 Score = 107 bits (54), Expect = 3e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 493 ta 494 || Sbjct: 25722118 ta 25722117 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 436 gtcgagagggaaacagcccggatcaccagctaaggccc 473 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 335 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 389 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84215 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 84156 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84155 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 84096 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84095 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 84036 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84035 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 83976 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83975 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 83916 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83915 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 83856 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83855 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 83796 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83795 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 83736 Query: 493 ta 494 || Sbjct: 83735 ta 83734
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119322 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 119263 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119262 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 119203 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119202 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 119143 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119142 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 119083 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119082 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 119023 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119022 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 118963 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118962 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 118903 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118902 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118843 Query: 493 ta 494 || Sbjct: 118842 ta 118841 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95796 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 95855 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95856 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 95915 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95916 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 95975 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95976 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 96035 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96036 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 96095 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96096 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 96155 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96156 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 96215 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96216 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 96275 Query: 493 ta 494 || Sbjct: 96276 ta 96277
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14570 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 14629 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14630 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 14689 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14690 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 14749 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14750 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 14809 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14810 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 14869 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14870 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 14929 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14930 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 14989 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14990 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 15049 Query: 493 ta 494 || Sbjct: 15050 ta 15051 Score = 924 bits (466), Expect = 0.0 Identities = 479/482 (99%), Gaps = 1/482 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122845 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 122904 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || Sbjct: 122905 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-tagg 122963 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122964 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 123023 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123024 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 123083 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123084 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 123143 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123144 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 123203 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123204 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 123263 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123264 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 123323 Query: 493 ta 494 || Sbjct: 123324 ta 123325
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141378 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 141437 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141438 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 141497 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141498 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 141557 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141558 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 141617 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141618 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 141677 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141678 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 141737 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141738 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 141797 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141798 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 141857 Query: 493 ta 494 || Sbjct: 141858 ta 141859
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93974 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 94033 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 94034 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 94093 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94094 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 94153 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94154 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 94213 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94214 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 94273 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94274 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 94333 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94334 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 94393 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94394 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 94453 Query: 493 ta 494 || Sbjct: 94454 ta 94455
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58041 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 57982 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 57981 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 57922 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57921 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 57862 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57861 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 57802 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57801 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 57742 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57741 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 57682 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57681 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 57622 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57621 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 57562 Query: 493 ta 494 || Sbjct: 57561 ta 57560
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28038 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 28097 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28098 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 28157 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28158 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 28217 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28218 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 28277 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28278 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 28337 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28338 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 28397 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28398 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 28457 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28458 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 28517 Query: 493 ta 494 || Sbjct: 28518 ta 28519
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268730 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 9268789 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268790 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 9268849 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268850 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 9268909 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268910 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 9268969 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268970 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 9269029 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269030 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 9269089 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269090 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 9269149 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269150 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 9269209 Query: 493 ta 494 || Sbjct: 9269210 ta 9269211 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056644 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 9056703 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056704 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 9056763 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056764 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 9056823 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056824 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 9056883 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056884 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 9056943 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056944 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 9057003 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057004 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 9057063 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057064 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 9057123 Query: 493 ta 494 || Sbjct: 9057124 ta 9057125 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228230 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 9228289 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 9228290 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctagg 9228349 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228350 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 9228409 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228410 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 9228469 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228470 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 9228529 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228530 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 9228589 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228590 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 9228649 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228650 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 9228709 Query: 493 ta 494 || Sbjct: 9228710 ta 9228711 Score = 924 bits (466), Expect = 0.0 Identities = 479/482 (99%), Gaps = 1/482 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164819 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 9164878 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || Sbjct: 9164879 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-tagg 9164937 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164938 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 9164997 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164998 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 9165057 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165058 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 9165117 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165118 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 9165177 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165178 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 9165237 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165238 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 9165297 Query: 493 ta 494 || Sbjct: 9165298 ta 9165299
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938715 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 19938774 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938775 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 19938834 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938835 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 19938894 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938895 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 19938954 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938955 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 19939014 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939015 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 19939074 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939075 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 19939134 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939135 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 19939194 Query: 493 ta 494 || Sbjct: 19939195 ta 19939196 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387582 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 10387641 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387642 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 10387701 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387702 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 10387761 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387762 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 10387821 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387822 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 10387881 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387882 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 10387941 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387942 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 10388001 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388002 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 10388061 Query: 493 ta 494 || Sbjct: 10388062 ta 10388063 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276716 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 10276657 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276656 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 10276597 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276596 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 10276537 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276536 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 10276477 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276476 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 10276417 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276416 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 10276357 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276356 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 10276297 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276296 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 10276237 Query: 493 ta 494 || Sbjct: 10276236 ta 10276235 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 342 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 401 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 402 tcggccagtgagacgatgggggataagcttcatcgtcgagag 443 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598897 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 31598956 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598957 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 31599016 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599017 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 31599076 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599077 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 31599136 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599137 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 31599196 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599197 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 31599256 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599257 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 31599316 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599317 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 31599376 Query: 493 ta 494 || Sbjct: 31599377 ta 31599378 Score = 155 bits (78), Expect = 2e-34 Identities = 78/78 (100%) Strand = Plus / Minus Query: 417 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 477 aatgaccgctcagtgata 494 |||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgata 11510003 Score = 107 bits (54), Expect = 3e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 493 ta 494 || Sbjct: 25813427 ta 25813426 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 436 gtcgagagggaaacagcccggatcaccagctaaggccc 473 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 335 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 389 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526213 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 33526272 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33526273 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 33526332 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526333 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 33526392 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526393 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 33526452 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526453 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 33526512 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526513 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 33526572 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526573 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 33526632 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526633 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 33526692 Query: 493 ta 494 || Sbjct: 33526693 ta 33526694 Score = 131 bits (66), Expect = 2e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677991 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 16677932 Query: 73 gccgta 78 |||||| Sbjct: 16677931 gccgta 16677926 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 426 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 485 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 486 tcagtgata 494 ||||||||| Sbjct: 527811 tcagtgata 527819
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47328 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 47269 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47268 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 47209 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47208 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 47149 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47148 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 47089 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47088 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 47029 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47028 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 46969 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46968 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 46909 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46908 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 46849 Query: 493 ta 494 || Sbjct: 46848 ta 46847
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71410 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 71469 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71470 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 71529 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71530 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 71589 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71590 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 71649 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71650 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 71709 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71710 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 71769 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71770 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 71829 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71830 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 71889 Query: 493 ta 494 || Sbjct: 71890 ta 71891
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 241 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 242 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 301 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 361 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 421 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 481 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 541 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 601 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 661 Query: 493 ta 494 || Sbjct: 662 ta 663
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 436 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 437 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 496 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 556 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 616 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 676 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 736 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 796 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 856 Query: 493 ta 494 || Sbjct: 857 ta 858
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 548 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 549 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 608 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 668 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 728 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 788 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 848 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 908 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 968 Query: 493 ta 494 || Sbjct: 969 ta 970
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 307 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 308 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 367 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 427 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 487 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 547 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 607 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 608 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 667 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 727 Query: 493 ta 494 || Sbjct: 728 ta 729
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 438 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 439 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 498 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 558 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 618 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 678 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 738 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 798 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 858 Query: 493 ta 494 || Sbjct: 859 ta 860
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 257 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 258 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 317 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 377 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 437 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 497 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 557 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 617 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 677 Query: 493 ta 494 || Sbjct: 678 ta 679
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 436 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 437 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 496 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 556 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 616 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 676 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 736 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 796 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 856 Query: 493 ta 494 || Sbjct: 857 ta 858
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 438 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 439 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 498 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 558 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 618 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 678 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 738 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 798 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 858 Query: 493 ta 494 || Sbjct: 859 ta 860
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949991 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 19950050 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19950051 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 19950110 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950111 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 19950170 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950171 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 19950230 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950231 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 19950290 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950291 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 19950350 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950351 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 19950410 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950411 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 19950470 Query: 493 ta 494 || Sbjct: 19950471 ta 19950472 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393621 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 10393680 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393681 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 10393740 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393741 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 10393800 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393801 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 10393860 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393861 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 10393920 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393921 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 10393980 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393981 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 10394040 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394041 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 10394100 Query: 493 ta 494 || Sbjct: 10394101 ta 10394102 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282755 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 10282696 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282695 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 10282636 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282635 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 10282576 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282575 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 10282516 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282515 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 10282456 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282455 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 10282396 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282395 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 10282336 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282335 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 10282276 Query: 493 ta 494 || Sbjct: 10282275 ta 10282274 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 342 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 401 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 402 tcggccagtgagacgatgggggataagcttcatcgtcgagag 443 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119296 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 119237 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119236 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 119177 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119176 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 119117 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119116 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 119057 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119056 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 118997 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118996 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 118937 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118936 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 118877 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118876 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118817 Query: 493 ta 494 || Sbjct: 118816 ta 118815 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95743 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 95802 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95803 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 95862 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95863 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 95922 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95923 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 95982 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95983 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 96042 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96043 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 96102 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96103 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 96162 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96163 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 96222 Query: 493 ta 494 || Sbjct: 96223 ta 96224
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 944 bits (476), Expect = 0.0 Identities = 479/480 (99%) Strand = Plus / Plus Query: 15 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 75 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 134 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 135 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 195 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 255 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 315 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 375 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 435 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 942 bits (475), Expect = 0.0 Identities = 478/479 (99%) Strand = Plus / Plus Query: 16 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 76 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 135 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 136 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 196 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 256 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 316 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 376 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 436 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 479
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 20805 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 20864 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20865 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 20924 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20925 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 20984 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20985 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 21044 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21045 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 21104 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21105 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 21164 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21165 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 21224 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21225 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 21284 Query: 493 ta 494 || Sbjct: 21285 ta 21286 Score = 902 bits (455), Expect = 0.0 Identities = 477/483 (98%), Gaps = 1/483 (0%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 44313 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccctccgga 44254 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44253 gccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 44194 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44193 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 44134 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtg-aaatgccactcgaacccagag 251 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 44133 atgttgaagaatcagcggatgagttgtggttaggggtgtaaatgccactcgaacccagag 44074 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 311 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44073 ctagttggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 44014 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44013 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 43954 Query: 372 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43953 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 43894 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43893 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 43834 Query: 492 ata 494 ||| Sbjct: 43833 ata 43831
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 942 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 883 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 882 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 823 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 763 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 703 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 643 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 583 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 523 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 463 Query: 493 ta 494 || Sbjct: 462 ta 461
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123152 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 123093 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123092 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 123033 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123032 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 122973 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122972 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 122913 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122912 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 122853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122852 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 122793 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122792 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 122733 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122732 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 122673 Query: 493 ta 494 || Sbjct: 122672 ta 122671 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99685 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 99744 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99745 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 99804 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99805 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 99864 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99865 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 99924 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99925 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 99984 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99985 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 100044 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100045 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 100104 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100105 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 100164 Query: 493 ta 494 || Sbjct: 100165 ta 100166
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 435 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 436 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 495 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 496 tgatctatccatgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgactg 555 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 615 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 675 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 735 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 795 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 855 Query: 493 ta 494 || Sbjct: 856 ta 857
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123869 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 123810 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123809 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 123750 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123749 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 123690 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123689 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 123630 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123629 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 123570 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123569 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 123510 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123509 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 123450 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123449 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 123390 Query: 493 ta 494 || Sbjct: 123389 ta 123388 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 100362 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 100421 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100422 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 100481 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100482 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 100541 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100542 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 100601 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100602 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 100661 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100662 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 100721 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100722 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 100781 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100782 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 100841 Query: 493 ta 494 || Sbjct: 100842 ta 100843
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 934 bits (471), Expect = 0.0 Identities = 474/475 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 433 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 434 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 493 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 553 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 613 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 673 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 733 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 793 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 487 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 932 bits (470), Expect = 0.0 Identities = 479/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241551 tgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccgga 9241492 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241491 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 9241432 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9241431 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctg 9241372 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241371 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 9241312 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241311 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 9241252 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241251 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 9241192 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241191 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 9241132 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241131 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 9241072 Query: 493 ta 494 || Sbjct: 9241071 ta 9241070 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 307 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 366 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 367 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 426 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 427 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 472 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 932 bits (470), Expect = 0.0 Identities = 479/482 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52764 tgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccgga 52705 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52704 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 52645 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 52644 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctg 52585 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52584 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 52525 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52524 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 52465 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52464 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 52405 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52404 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 52345 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52344 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 52285 Query: 493 ta 494 || Sbjct: 52284 ta 52283
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 916 bits (462), Expect = 0.0 Identities = 478/482 (99%), Gaps = 1/482 (0%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123092 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 123033 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123032 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 122973 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122972 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 122913 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122912 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 122853 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122852 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 122793 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122792 gcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 122734 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122733 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 122674 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122673 atcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtga 122614 Query: 493 ta 494 || Sbjct: 122613 ta 122612 Score = 916 bits (462), Expect = 0.0 Identities = 478/482 (99%), Gaps = 1/482 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99645 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 99704 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99705 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 99764 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99765 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 99824 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99825 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 99884 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99885 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 99944 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99945 gcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 100003 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100004 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 100063 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 100064 atcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtga 100123 Query: 493 ta 494 || Sbjct: 100124 ta 100125
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 916 bits (462), Expect = 0.0 Identities = 478/482 (99%), Gaps = 1/482 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5998 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 6057 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6058 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 6117 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6118 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 6177 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6178 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 6237 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6238 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 6297 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6298 gcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 6356 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6357 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 6416 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 6417 atcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtga 6476 Query: 493 ta 494 || Sbjct: 6477 ta 6478
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 916 bits (462), Expect = 0.0 Identities = 478/482 (99%), Gaps = 1/482 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 586 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 645 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 646 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 705 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 765 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 825 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 885 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 gcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 944 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 1004 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1005 atcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtga 1064 Query: 493 ta 494 || Sbjct: 1065 ta 1066
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 906 bits (457), Expect = 0.0 Identities = 460/461 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 641 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 642 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 701 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 761 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 821 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 881 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 941 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 1001 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggccc 473 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 atcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 858 bits (433), Expect = 0.0 Identities = 472/484 (97%), Gaps = 2/484 (0%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaacccaccg 70 ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122634 tgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaacccaccg 122575 Query: 71 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 130 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122574 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 122515 Query: 131 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 190 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122514 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgac 122455 Query: 191 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122454 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 122395 Query: 251 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122394 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122335 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122334 aagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatact 122275 Query: 371 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 122274 agatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagct 122215 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 122214 tcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaat 122155 Query: 491 gata 494 |||| Sbjct: 122154 gata 122151
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 858 bits (433), Expect = 0.0 Identities = 472/484 (97%), Gaps = 2/484 (0%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaacccaccg 70 ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 12825175 tgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaacccaccg 12825116 Query: 71 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 130 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12825115 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 12825056 Query: 131 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 190 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12825055 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgac 12824996 Query: 191 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824995 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 12824936 Query: 251 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824935 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 12824876 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12824875 aagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatact 12824816 Query: 371 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 12824815 agatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagct 12824756 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 12824755 tcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaat 12824696 Query: 491 gata 494 |||| Sbjct: 12824695 gata 12824692
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 844 bits (426), Expect = 0.0 Identities = 468/482 (97%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131088 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 131034 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 131033 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 130974 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 130973 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 130914 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130913 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 130854 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130853 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 130794 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 130793 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 130734 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130733 atatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 130674 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130673 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 130614 Query: 493 ta 494 || Sbjct: 130613 ta 130612 Score = 844 bits (426), Expect = 0.0 Identities = 468/482 (97%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103547 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 103601 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 103602 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 103661 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 103662 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 103721 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103722 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 103781 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103782 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 103841 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 103842 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 103901 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103902 atatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 103961 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103962 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 104021 Query: 493 ta 494 || Sbjct: 104022 ta 104023
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 844 bits (426), Expect = 0.0 Identities = 468/482 (97%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141528 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 141474 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 141473 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 141414 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 141413 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 141354 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141353 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 141294 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141293 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 141234 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 141233 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 141174 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 141173 atatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttc 141114 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141113 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 141054 Query: 493 ta 494 || Sbjct: 141053 ta 141052 Score = 844 bits (426), Expect = 0.0 Identities = 468/482 (97%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112129 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 112183 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 112184 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 112243 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 112244 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 112303 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112304 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 112363 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112364 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 112423 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 112424 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 112483 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112484 atatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttc 112543 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112544 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 112603 Query: 493 ta 494 || Sbjct: 112604 ta 112605
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 844 bits (426), Expect = 0.0 Identities = 468/482 (97%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 580 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 634 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 635 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 694 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 695 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 754 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 814 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 874 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 875 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 934 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 atatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 994 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 1054 Query: 493 ta 494 || Sbjct: 1055 ta 1056
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138925 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 138871 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 138870 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 138811 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 138810 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 138751 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138750 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 138691 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138690 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 138631 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 138630 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 138571 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138570 atatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagcttc 138511 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138510 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 138451 Query: 493 ta 494 || Sbjct: 138450 ta 138449 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110172 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 110226 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110227 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 110286 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 110287 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 110346 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110347 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 110406 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110407 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 110466 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 110467 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 110526 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110527 atatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagcttc 110586 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110587 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 110646 Query: 493 ta 494 || Sbjct: 110647 ta 110648
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132196 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 132142 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 132141 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 132082 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 132081 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 132022 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132021 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 131962 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131961 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 131902 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 131901 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 131842 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131841 atatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 131782 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131781 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 131722 Query: 493 ta 494 || Sbjct: 131721 ta 131720 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104682 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 104736 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 104737 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 104796 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 104797 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 104856 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104857 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 104916 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104917 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 104976 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 104977 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 105036 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105037 atatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 105096 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105097 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 105156 Query: 493 ta 494 || Sbjct: 105157 ta 105158
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131212 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 131158 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 131157 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 131098 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 131097 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 131038 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131037 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 130978 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130977 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 130918 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 130917 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 130858 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130857 atatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 130798 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130797 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 130738 Query: 493 ta 494 || Sbjct: 130737 ta 130736 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102233 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 102287 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 102288 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 102347 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 102348 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 102407 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102408 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 102467 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102468 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 102527 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 102528 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 102587 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102588 atatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 102647 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102648 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 102707 Query: 493 ta 494 || Sbjct: 102708 ta 102709
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136359 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 136305 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 136304 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 136245 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 136244 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 136185 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136184 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 136125 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136124 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 136065 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 136064 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 136005 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 136004 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 135945 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135944 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 135885 Query: 493 ta 494 || Sbjct: 135884 ta 135883 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107198 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 107252 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 107253 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 107312 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 107313 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 107372 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107373 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 107432 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107433 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 107492 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107493 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 107552 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107553 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 107612 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107613 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 107672 Query: 493 ta 494 || Sbjct: 107673 ta 107674
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134967 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 134913 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 134912 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 134853 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 134852 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 134793 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134792 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 134733 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134732 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 134673 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134672 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 134613 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134612 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 134553 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134552 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 134493 Query: 493 ta 494 || Sbjct: 134492 ta 134491 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106069 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106123 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106124 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 106183 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106184 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106243 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106244 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106303 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106304 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106363 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106364 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 106423 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106424 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 106483 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106484 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 106543 Query: 493 ta 494 || Sbjct: 106544 ta 106545
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136013 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135959 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135958 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 135899 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 135898 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 135839 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135838 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 135779 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135778 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 135719 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135718 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 135659 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135658 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 135599 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135598 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 135539 Query: 493 ta 494 || Sbjct: 135538 ta 135537 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106412 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106466 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106467 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 106526 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106527 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106586 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106587 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106646 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106647 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106706 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106707 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 106766 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106767 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 106826 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106827 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 106886 Query: 493 ta 494 || Sbjct: 106887 ta 106888
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135102 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135048 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135047 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 134988 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 134987 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 134928 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134927 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 134868 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134867 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 134808 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134807 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 134748 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134747 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 134688 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134687 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 134628 Query: 493 ta 494 || Sbjct: 134627 ta 134626 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106241 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106295 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106296 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 106355 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106356 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106415 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106416 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106475 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106476 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106535 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106536 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 106595 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106596 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 106655 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106656 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 106715 Query: 493 ta 494 || Sbjct: 106716 ta 106717
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135100 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135046 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135045 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 134986 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 134985 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 134926 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 134866 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134865 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 134806 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134805 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 134746 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134745 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 134686 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134685 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 134626 Query: 493 ta 494 || Sbjct: 134625 ta 134624 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106238 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106292 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106293 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 106352 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106353 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106412 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106413 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106472 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106473 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106532 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106533 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 106592 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106593 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 106652 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106653 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 106712 Query: 493 ta 494 || Sbjct: 106713 ta 106714
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135012 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 134958 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 134957 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 134898 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 134897 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 134838 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134837 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 134778 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134777 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 134718 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134717 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 134658 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134657 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 134598 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134597 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 134538 Query: 493 ta 494 || Sbjct: 134537 ta 134536 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106116 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106170 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106171 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 106230 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106231 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106290 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106291 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106350 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106351 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106410 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106411 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 106470 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106471 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 106530 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106531 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 106590 Query: 493 ta 494 || Sbjct: 106591 ta 106592
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 837 bits (422), Expect = 0.0 Identities = 468/482 (97%), Gaps = 6/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133643 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 133589 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133588 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 133529 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 133528 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 133469 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133468 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 133409 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 133408 tagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaa 133349 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 133348 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 133289 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133288 atatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttc 133230 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133229 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 133170 Query: 493 ta 494 || Sbjct: 133169 ta 133168 Score = 837 bits (422), Expect = 0.0 Identities = 468/482 (97%), Gaps = 6/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104328 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 104382 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104383 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 104442 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 104443 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 104502 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 104562 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104563 tagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaa 104622 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 104623 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 104682 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104683 atatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttc 104741 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 104801 Query: 493 ta 494 || Sbjct: 104802 ta 104803
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132189 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 132135 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 132134 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 132075 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 132074 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 132015 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132014 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 131955 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131954 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 131895 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 131894 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 131835 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131834 atatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 131775 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131774 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 131715 Query: 493 ta 494 || Sbjct: 131714 ta 131713 Score = 837 bits (422), Expect = 0.0 Identities = 467/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104680 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 104734 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 104735 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 104794 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 104795 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 104854 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104855 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 104914 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104915 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 104974 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 104975 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 105034 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105035 atatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 105094 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105095 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 105154 Query: 493 ta 494 || Sbjct: 105155 ta 105156
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135721 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135667 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135666 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 135607 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 135606 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 135547 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135546 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 135487 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135486 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 135427 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135426 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 135367 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135366 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 135307 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135306 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 135247 Query: 493 ta 494 || Sbjct: 135246 ta 135245 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106909 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106963 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106964 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 107023 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 107024 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 107083 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107084 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 107143 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107144 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 107203 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107204 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 107263 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107264 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 107323 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107324 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 107383 Query: 493 ta 494 || Sbjct: 107384 ta 107385
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135322 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135268 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 135267 gccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctggg 135208 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 135207 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 135148 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135147 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 135088 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135087 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 135028 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135027 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 134968 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134967 atatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 134908 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134907 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 134848 Query: 493 ta 494 || Sbjct: 134847 ta 134846 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106584 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106638 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 106639 gccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctggg 106698 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106699 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106758 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106759 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106818 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106819 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106878 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106879 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 106938 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106939 atatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 106998 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106999 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 107058 Query: 493 ta 494 || Sbjct: 107059 ta 107060
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 142300 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 142246 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 142245 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 142186 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142185 tgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactg 142126 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142125 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 142066 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142065 tagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 142006 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 142005 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 141946 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 141945 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttg 141886 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141885 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 141826 Query: 493 ta 494 || Sbjct: 141825 ta 141824 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111028 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 111082 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 111083 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 111142 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 111143 tgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactg 111202 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111203 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 111262 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111263 tagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 111322 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 111323 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 111382 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111383 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttg 111442 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111443 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 111502 Query: 493 ta 494 || Sbjct: 111503 ta 111504
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2103 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 2157 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 2158 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 2217 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 2218 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 2277 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2278 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 2337 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2338 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 2397 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 2398 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 2457 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2458 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 2517 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2518 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 2577 Query: 493 ta 494 || Sbjct: 2578 ta 2579
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135601 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135547 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 135546 gccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctggg 135487 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 135486 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 135427 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135426 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 135367 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135366 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 135307 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135306 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 135247 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135246 atatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 135187 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135186 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 135127 Query: 493 ta 494 || Sbjct: 135126 ta 135125 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106806 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106860 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 106861 gccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctggg 106920 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106921 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106980 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 107040 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107041 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 107100 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107101 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 107160 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107161 atatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 107220 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107221 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 107280 Query: 493 ta 494 || Sbjct: 107281 ta 107282
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135719 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135665 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135664 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 135605 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 135604 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 135545 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135544 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 135485 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135484 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 135425 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135424 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 135365 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135364 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 135305 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135304 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 135245 Query: 493 ta 494 || Sbjct: 135244 ta 135243 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106907 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106961 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106962 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 107021 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 107022 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 107081 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107082 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 107141 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107142 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 107201 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107202 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 107261 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107262 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 107321 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107322 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 107381 Query: 493 ta 494 || Sbjct: 107382 ta 107383
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135450 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 135396 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135395 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 135336 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 135335 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 135276 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135275 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 135216 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135215 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 135156 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135155 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 135096 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135095 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 135036 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135035 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 134976 Query: 493 ta 494 || Sbjct: 134975 ta 134974 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106688 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 106742 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106743 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 106802 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106803 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106862 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106863 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106922 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106923 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106982 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106983 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 107042 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107043 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 107102 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107103 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 107162 Query: 493 ta 494 || Sbjct: 107163 ta 107164
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139130 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 139076 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 139075 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 139016 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 139015 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 138956 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138955 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 138896 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138895 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 138836 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 138835 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 138776 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138775 atatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagcttc 138716 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138715 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 138656 Query: 493 ta 494 || Sbjct: 138655 ta 138654 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110169 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 110223 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110224 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 110283 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 110284 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 110343 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110344 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 110403 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110404 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 110463 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 110464 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 110523 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110524 atatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagcttc 110583 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110584 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 110643 Query: 493 ta 494 || Sbjct: 110644 ta 110645
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 829 bits (418), Expect = 0.0 Identities = 466/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 676 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 730 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 731 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 790 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 791 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 850 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 910 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 970 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 971 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 1030 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1031 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 1090 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1091 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtga 1150 Query: 493 ta 494 || Sbjct: 1151 ta 1152
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 821 bits (414), Expect = 0.0 Identities = 465/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 134979 tgaagaatgagccggcgactaataggcagtggcttggttaagggaac-----ccaccgga 134925 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 134924 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 134865 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 134864 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 134805 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134804 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 134745 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134744 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 134685 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||| Sbjct: 134684 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatag 134625 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134624 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 134565 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134564 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 134505 Query: 493 ta 494 || Sbjct: 134504 ta 134503 Score = 821 bits (414), Expect = 0.0 Identities = 465/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 106083 tgaagaatgagccggcgactaataggcagtggcttggttaagggaac-----ccaccgga 106137 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106138 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 106197 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 106198 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106257 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106258 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106317 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106318 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106377 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||| Sbjct: 106378 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatag 106437 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106438 atatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 106497 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106498 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 106557 Query: 493 ta 494 || Sbjct: 106558 ta 106559
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 815 bits (411), Expect = 0.0 Identities = 468/487 (96%), Gaps = 10/487 (2%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139006 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 138952 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 138951 gccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 138892 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 138891 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 138832 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138831 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 138772 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138771 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 138712 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 138711 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 138652 Query: 373 atatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 427 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138651 atatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 138592 Query: 428 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138591 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 138532 Query: 488 agtgata 494 ||||||| Sbjct: 138531 agtgata 138525 Score = 815 bits (411), Expect = 0.0 Identities = 468/487 (96%), Gaps = 10/487 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110939 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 110993 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110994 gccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 111053 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 111054 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 111113 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111114 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 111173 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111174 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 111233 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 111234 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 111293 Query: 373 atatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 427 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111294 atatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 111353 Query: 428 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111354 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 111413 Query: 488 agtgata 494 ||||||| Sbjct: 111414 agtgata 111420
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 578 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 632 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 633 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 692 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 693 tgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 752 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 812 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 872 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 873 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 932 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 933 atatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttc 992 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 1052 Query: 493 ta 494 || Sbjct: 1053 ta 1054
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132419 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 132365 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 132364 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 132305 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 132304 tgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 132245 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132244 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 132185 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132184 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 132125 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 132124 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 132065 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132064 atatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttc 132005 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132004 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 131945 Query: 493 ta 494 || Sbjct: 131944 ta 131943 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104345 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 104399 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 104400 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 104459 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 104460 tgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 104519 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104520 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 104579 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104580 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 104639 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 104640 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 104699 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104700 atatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttc 104759 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104760 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 104819 Query: 493 ta 494 || Sbjct: 104820 ta 104821
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 585 tgaaaaatgagccggcgactcatacgcagtggcttggttaagggaac-----ccaccgga 639 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 640 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 699 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 700 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 759 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 819 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 879 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 880 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 939 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 atatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 999 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 atcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 1059 Query: 493 ta 494 || Sbjct: 1060 ta 1061
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131288 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccaccgga 131234 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 131233 gccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacctggg 131174 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 131173 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 131114 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131113 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 131054 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131053 tagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaa 130994 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 130993 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 130934 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130933 atatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagcttc 130874 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130873 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 130814 Query: 493 ta 494 || Sbjct: 130813 ta 130812 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104106 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccaccgga 104160 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 104161 gccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacctggg 104220 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 104221 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 104280 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104281 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 104340 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104341 tagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaa 104400 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 104401 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 104460 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104461 atatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagcttc 104520 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104521 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 104580 Query: 493 ta 494 || Sbjct: 104581 ta 104582
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133380 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 133326 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 133325 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 133266 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 133265 tgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 133206 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133205 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 133146 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133145 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 133086 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 133085 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 133026 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133025 atatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttc 132966 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132965 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 132906 Query: 493 ta 494 || Sbjct: 132905 ta 132904 Score = 813 bits (410), Expect = 0.0 Identities = 464/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105269 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 105323 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 105324 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 105383 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 105384 tgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 105443 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105444 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 105503 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105504 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 105563 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 105564 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 105623 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105624 atatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttc 105683 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105684 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 105743 Query: 493 ta 494 || Sbjct: 105744 ta 105745
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 811 bits (409), Expect = 0.0 Identities = 464/482 (96%), Gaps = 9/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 127284 tgaagaatgagccggcgactcataggcagtggcttggttaagggaat-----ccaccgta 127230 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127229 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 127170 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 127169 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 127110 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127109 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 127050 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127049 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 126990 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 126989 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 126930 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126929 atatgacccca----aacaggggtcaaggtcggccagtgagacgatgggggataagcttc 126874 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126873 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 126814 Query: 493 ta 494 || Sbjct: 126813 ta 126812 Score = 811 bits (409), Expect = 0.0 Identities = 464/482 (96%), Gaps = 9/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 107638 tgaagaatgagccggcgactcataggcagtggcttggttaagggaat-----ccaccgta 107692 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107693 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 107752 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 107753 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 107812 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107813 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 107872 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107873 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 107932 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107933 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 107992 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107993 atatgacccca----aacaggggtcaaggtcggccagtgagacgatgggggataagcttc 108048 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108049 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 108108 Query: 493 ta 494 || Sbjct: 108109 ta 108110
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 807 bits (407), Expect = 0.0 Identities = 465/483 (96%), Gaps = 6/483 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1074 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 1128 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1129 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 1188 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 1189 tgatctatccatgaccaggatgaagcttgggtgaaactaagtgagggtccgaaccgactg 1248 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1249 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 1308 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1309 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 1368 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 1369 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 1428 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat-gggggataagctt 431 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1429 atatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggggataagctt 1488 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1489 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1548 Query: 492 ata 494 ||| Sbjct: 1549 ata 1551
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 805 bits (406), Expect = 0.0 Identities = 463/482 (96%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 587 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 641 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 642 gccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctggg 701 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| Sbjct: 702 tgatctatccatgaccaggatggagcttgggtgaaactaagtggaggtccgaaccgactg 761 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 821 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 881 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 882 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 941 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 942 atatgacctcaaaataacaggggttaaggtcggccagtgagacaatgggggataagcttc 1001 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1002 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcaatga 1061 Query: 493 ta 494 || Sbjct: 1062 ta 1063
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 793 bits (400), Expect = 0.0 Identities = 461/482 (95%), Gaps = 12/482 (2%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134405 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 134351 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 134350 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 134291 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 134290 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 134231 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134230 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 134171 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134170 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 134111 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134110 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 134051 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||| || ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134050 atatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagcttc 133998 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133997 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 133938 Query: 493 ta 494 || Sbjct: 133937 ta 133936 Score = 793 bits (400), Expect = 0.0 Identities = 461/482 (95%), Gaps = 12/482 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105877 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 105931 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 105932 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 105991 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 105992 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 106051 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106052 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 106111 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106112 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 106171 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106172 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 106231 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||| || ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106232 atatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagcttc 106284 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106285 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 106344 Query: 493 ta 494 || Sbjct: 106345 ta 106346
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 793 bits (400), Expect = 0.0 Identities = 466/484 (96%), Gaps = 8/484 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2347 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 2401 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 2402 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 2461 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagagg-tccgaaccgact 191 |||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| Sbjct: 2462 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggagggtccgaaccgact 2521 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatg-ccactcgaacccaga 250 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2522 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatggccactcgaacccaga 2581 Query: 251 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2582 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 2641 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2642 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 2701 Query: 371 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2702 agatatgactc-aaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 2760 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2761 tcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaaatgaccgctcagt 2820 Query: 491 gata 494 |||| Sbjct: 2821 gata 2824
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 789 bits (398), Expect = 0.0 Identities = 449/466 (96%), Gaps = 5/466 (1%) Strand = Plus / Plus Query: 29 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 88 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 89 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 148 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 149 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 208 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 209 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 269 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 329 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 388 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 389 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 448 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 449 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 1052
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 789 bits (398), Expect = 0.0 Identities = 461/482 (95%), Gaps = 5/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 129951 tgaagaatgagccggcgactcataggtagtggcttggttaagggaaa-----ccaccgga 129897 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 129896 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 129837 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 129836 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 129777 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129776 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 129717 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 129716 tagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaa 129657 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 129656 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 129597 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 129596 atatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagcttc 129537 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 129536 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtga 129477 Query: 493 ta 494 || Sbjct: 129476 ta 129475 Score = 789 bits (398), Expect = 0.0 Identities = 461/482 (95%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 102505 tgaagaatgagccggcgactcataggtagtggcttggttaagggaaa-----ccaccgga 102559 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 102560 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 102619 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 102620 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 102679 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102680 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 102739 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 102740 tagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaa 102799 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 102800 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 102859 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| ||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 102860 atatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagcttc 102919 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102920 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtga 102979 Query: 493 ta 494 || Sbjct: 102980 ta 102981
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 783 bits (395), Expect = 0.0 Identities = 450/468 (96%), Gaps = 4/468 (0%) Strand = Plus / Plus Query: 27 gcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagc 86 |||| ||||| |||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 612 gcgaatcataagcagtggcttggttaacgg----gaacccaccggagccgtagcgaaagc 667 Query: 87 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 146 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 727 Query: 147 ccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 206 |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 728 ccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 787 Query: 207 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 847 Query: 267 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 907 Query: 327 cgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaa 386 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 908 cgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaa 967 Query: 387 taacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggga 446 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 taacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggga 1027 Query: 447 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 1075
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 775 bits (391), Expect = 0.0 Identities = 397/399 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 399 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 340 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 339 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 280 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 220 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 160 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 100 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 40 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtg 411 ||||||||||||||||||||||||||||||||||||||| Sbjct: 39 atatgacccaaaaataacaggggtcaaggtcggccagtg 1
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 775 bits (391), Expect = 0.0 Identities = 424/435 (97%) Strand = Plus / Plus Query: 60 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 119 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 120 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 179 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 180 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 240 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 300 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 359 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 360 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 420 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 480 gaccgctcagtgata 494 |||||| |||||||| Sbjct: 1022 gaccgcccagtgata 1036
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 773 bits (390), Expect = 0.0 Identities = 457/478 (95%), Gaps = 6/478 (1%) Strand = Plus / Plus Query: 18 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga-gccg 76 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 603 aatgagccggcgactcataggaagtggcttggttaagggaac-----ccaccggaagccg 657 Query: 77 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 136 ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 658 tagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgat 717 Query: 137 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 196 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 718 ctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgt 777 Query: 197 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 837 Query: 257 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 316 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 838 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaagggtaaagcac 897 Query: 317 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 376 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 898 tgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactaaatat 957 Query: 377 gacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcg 436 |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 958 gacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcg 1017 Query: 437 tcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1018 tccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 1075
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 771 bits (389), Expect = 0.0 Identities = 456/477 (95%), Gaps = 6/477 (1%) Strand = Plus / Plus Query: 18 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 77 ||||||||| ||||||||||| |||||||||||||||||||| ||| ||||||||| Sbjct: 604 aatgagccg-cgactcataggaagtggcttggttaagggaac-----ccaacggagccgt 657 Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 658 agcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatc 717 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 718 tatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgtt 777 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 837 Query: 258 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcact 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcact 897 Query: 318 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 377 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 gtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatg 957 Query: 378 acccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 437 ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 958 acctcaaaataacaggggttaaggtcggccagtgagaccatgggggataagcttcatcgt 1017 Query: 438 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1018 ccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 1074
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 769 bits (388), Expect = 0.0 Identities = 458/482 (95%), Gaps = 12/482 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 64 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 118 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 119 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 178 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 179 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 238 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 298 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 299 tagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaa 358 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 359 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 418 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 || || || |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 419 atctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttc 471 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 531 Query: 493 ta 494 || Sbjct: 532 ta 533
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 769 bits (388), Expect = 0.0 Identities = 458/482 (95%), Gaps = 12/482 (2%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139781 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 139727 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 139726 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 139667 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 139666 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 139607 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139606 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 139547 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 139546 tagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaa 139487 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 139486 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 139427 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 || || || |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 139426 atctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttc 139374 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139373 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 139314 Query: 493 ta 494 || Sbjct: 139313 ta 139312 Score = 769 bits (388), Expect = 0.0 Identities = 458/482 (95%), Gaps = 12/482 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110279 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 110333 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110334 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 110393 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 110394 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 110453 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110454 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 110513 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 110514 tagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaa 110573 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 110574 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 110633 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 || || || |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 110634 atctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttc 110686 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110687 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 110746 Query: 493 ta 494 || Sbjct: 110747 ta 110748
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 761 bits (384), Expect = 0.0 Identities = 457/482 (94%), Gaps = 12/482 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 80 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 134 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 194 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 195 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 254 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 255 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccgctcgaacccagagc 314 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 315 tagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaa 374 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 375 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 434 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 || || || |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 435 atctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttc 487 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 547 Query: 493 ta 494 || Sbjct: 548 ta 549
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 759 bits (383), Expect = 0.0 Identities = 460/483 (95%), Gaps = 7/483 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 177423 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 177477 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 177478 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 177537 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 177538 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga-ccgactg 177596 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177597 atgttgaagaatcagcgggtgagttgtggttaggggtgaaatgccactcgcacccagagc 177656 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177657 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 177716 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 177717 gcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 177776 Query: 373 atatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagctt 431 |||||||| ||||||| | |||| |||||||||| |||||||||||||||||||||||| Sbjct: 177777 atatgacctcaaaataagaggggggcaaggtcggctagtgagacgatgggggataagctt 177836 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177837 catcgtcgagagggaaagagcccggatcaccagctaaggcccctaaatgaccgctcagtg 177896 Query: 492 ata 494 ||| Sbjct: 177897 ata 177899 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 aggcccctaaatgaccgctcag 489 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 751 bits (379), Expect = 0.0 Identities = 458/483 (94%), Gaps = 6/483 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 52107 tgaagaatgagccggcgactcataggcagcggcttggttaagggaac-----ccaccgga 52053 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 52052 gccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctggg 51993 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 51992 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 51933 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51932 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 51873 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51872 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 51813 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 51812 gcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactag 51753 Query: 373 -atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 |||||||| | |||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 51752 aatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagctt 51693 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 51692 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtg 51633 Query: 492 ata 494 ||| Sbjct: 51632 ata 51630 Score = 751 bits (379), Expect = 0.0 Identities = 458/483 (94%), Gaps = 6/483 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 37721 tgaagaatgagccggcgactcataggcagcggcttggttaagggaac-----ccaccgga 37775 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 37776 gccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctggg 37835 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 37836 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 37895 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37896 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 37955 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37956 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 38015 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 38016 gcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactag 38075 Query: 373 -atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 |||||||| | |||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 38076 aatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagctt 38135 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 38136 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtg 38195 Query: 492 ata 494 ||| Sbjct: 38196 ata 38198
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 751 bits (379), Expect = 0.0 Identities = 458/483 (94%), Gaps = 6/483 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 4649 tgaagaatgagccggcgactcataggcagcggcttggttaagggaac-----ccaccgga 4703 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 4704 gccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctggg 4763 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 4764 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 4823 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4824 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 4883 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4884 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 4943 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 4944 gcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactag 5003 Query: 373 -atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 |||||||| | |||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 5004 aatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagctt 5063 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 5064 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtg 5123 Query: 492 ata 494 ||| Sbjct: 5124 ata 5126
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 743 bits (375), Expect = 0.0 Identities = 457/483 (94%), Gaps = 6/483 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 578 tgaagaatgagccggcgactcataggcagcggcttggttaagggaac-----ccaccgga 632 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||||| Sbjct: 633 gccatagcgaaagcgagtattcataggactattgtcactgcttatggacccgaacctggg 692 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| Sbjct: 693 tgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtccgaaccgactg 752 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 812 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 872 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| Sbjct: 873 gcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactag 932 Query: 373 -atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 933 aatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatgggggataagctt 992 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 993 catcgtcgagagggaaacagcccagatcaccagctaaggcccctaattgatcgctcagtg 1052 Query: 492 ata 494 ||| Sbjct: 1053 ata 1055
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 743 bits (375), Expect = 0.0 Identities = 455/482 (94%), Gaps = 11/482 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||| | |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 599 tgaagaattaaccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 653 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 654 gccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctggg 713 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 714 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 773 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 833 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 893 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 894 gcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactctgaatactag 953 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 432 |||||||| | |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 954 atatgacc------tcacaggggttaaggtcggccaatgagacgatgggggataagcttc 1007 Query: 433 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 492 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1008 atcttccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 1067 Query: 493 ta 494 || Sbjct: 1068 ta 1069
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 716 bits (361), Expect = 0.0 Identities = 453/481 (94%), Gaps = 7/481 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||| Sbjct: 581 tgaagaatgagccggcgacttataggtagtggcctggttaagggaac-----ccaccgga 635 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 636 gccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctggg 695 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 696 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 755 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 815 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 816 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 875 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 876 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 935 Query: 372 gatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggataagct 430 ||||||| || |||||||||||| | |||||| ||||||||||| ||||||||||||| Sbjct: 936 gatatgatccccaaataacaggggataaaggtcaaccagtgagacggtgggggataagct 995 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 996 tcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 1055 Query: 491 g 491 | Sbjct: 1056 g 1056
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 714 bits (360), Expect = 0.0 Identities = 441/464 (95%), Gaps = 8/464 (1%) Strand = Plus / Plus Query: 35 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 93 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 94 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 151 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 152 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 211 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 212 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 271 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 331 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 390 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 391 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 450 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 451 gcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 |||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgata 1072
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 712 bits (359), Expect = 0.0 Identities = 404/419 (96%), Gaps = 5/419 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46836 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 46890 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 46891 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 46950 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 46951 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 47010 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47011 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 47070 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47071 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 47130 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 47131 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 47190 Query: 373 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47191 atatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 708 bits (357), Expect = 0.0 Identities = 415/433 (95%), Gaps = 6/433 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 364761 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 364815 Query: 73 gccgtagcgaaag-cgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 131 ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 364816 gccgtagcgaaaggcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 364875 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 364876 gtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 364935 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364936 gatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 364995 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364996 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 365055 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 365056 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 365115 Query: 372 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 365116 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacggtgggggataagctt 365175 Query: 432 catcgtcgagagg 444 ||||||||||||| Sbjct: 365176 catcgtcgagagg 365188 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 439 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagt 129296 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 698 bits (352), Expect = 0.0 Identities = 452/482 (93%), Gaps = 10/482 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 86844 tgaagaatgagccggcgacttataggcagtggcttggttaagggaac-----ccaccgga 86898 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 86899 gccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacctggg 86958 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 86959 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 87018 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87019 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 87078 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaa 311 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 87079 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaa 87138 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 87139 agcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 87198 Query: 372 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 ||| || ||| ||||| |||||| | |||| |||||||||||||||||||||||||| Sbjct: 87199 gat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatgggggataagctt 87254 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 87255 catcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 87314 Query: 492 at 493 || Sbjct: 87315 at 87316
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 692 bits (349), Expect = 0.0 Identities = 455/486 (93%), Gaps = 12/486 (2%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 145978 tgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccaccgga 145924 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 145923 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 145864 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 145863 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 145804 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 145803 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagc 145744 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 145743 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 145684 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 145683 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 145624 Query: 372 gatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggat 425 | ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||||| Sbjct: 145623 ggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggat 145564 Query: 426 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 485 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 145563 aagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgc 145504 Query: 486 tcagtg 491 |||||| Sbjct: 145503 tcagtg 145498 Score = 692 bits (349), Expect = 0.0 Identities = 455/486 (93%), Gaps = 12/486 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 112484 tgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccaccgga 112538 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 112539 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 112598 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 112599 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 112658 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 112659 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagc 112718 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112719 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 112778 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112779 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 112838 Query: 372 gatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggat 425 | ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||||| Sbjct: 112839 ggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggat 112898 Query: 426 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 485 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 112899 aagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgc 112958 Query: 486 tcagtg 491 |||||| Sbjct: 112959 tcagtg 112964
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 684 bits (345), Expect = 0.0 Identities = 449/481 (93%), Gaps = 7/481 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||| Sbjct: 117568 tgaagaatgagccggcgacttataggtagtggcctggttaagggaac-----ccaccgga 117514 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 117513 gccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctggg 117454 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 117453 tgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 117394 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117393 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 117334 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 117333 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 117274 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 117273 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 117214 Query: 372 gatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| || |||||| | ||||| | |||| ||||||||||| ||||||||||||| Sbjct: 117213 gatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataagct 117154 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 117153 tcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagt 117094 Query: 491 g 491 | Sbjct: 117093 g 117093 Score = 684 bits (345), Expect = 0.0 Identities = 449/481 (93%), Gaps = 7/481 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||| Sbjct: 90534 tgaagaatgagccggcgacttataggtagtggcctggttaagggaac-----ccaccgga 90588 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 90589 gccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctggg 90648 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 90649 tgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 90708 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90709 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 90768 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 90769 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 90828 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 90829 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 90888 Query: 372 gatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| || |||||| | ||||| | |||| ||||||||||| ||||||||||||| Sbjct: 90889 gatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataagct 90948 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 90949 tcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagt 91008 Query: 491 g 491 | Sbjct: 91009 g 91009
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 672 bits (339), Expect = 0.0 Identities = 449/482 (93%), Gaps = 9/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 88930 tgaagaatgagccggcgacttataggcagtggcttggttaagggaac-----ccaccgga 88984 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 88985 gccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacctggg 89044 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 89045 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 89104 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89105 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 89164 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaa 311 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 89165 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaa 89224 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 89225 agcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactctgaatacta 89284 Query: 372 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 431 ||| | ||||| | || ||||| | |||| |||||||||||||||||||||||||| Sbjct: 89285 gat-taccccaata--aaagggggtaagggtcaaccagtgagacgatgggggataagctt 89341 Query: 432 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 89342 catcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 89401 Query: 492 at 493 || Sbjct: 89402 at 89403
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 668 bits (337), Expect = 0.0 Identities = 447/481 (92%), Gaps = 7/481 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||| |||||||||| || |||||||| Sbjct: 581 tgaagaatgagccggcgacttataggtagtggcctggttaaggggac-----ccaccgga 635 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||| Sbjct: 636 gccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacccgaacctggg 695 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||| Sbjct: 696 tgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgactg 755 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 815 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 816 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 875 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 876 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 935 Query: 372 gatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggataagct 430 ||||||| | |||||| |||| | | |||| ||||||||||| ||||||||||||| Sbjct: 936 gatatgatctccgaataacgggggataagggtcaaccagtgagacggtgggggataagct 995 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 996 tcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 1055 Query: 491 g 491 | Sbjct: 1056 g 1056
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 650 bits (328), Expect = 0.0 Identities = 440/476 (92%), Gaps = 6/476 (1%) Strand = Plus / Minus Query: 17 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 76 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 127856 gaatgagccggcgactcataggcagtggcctggttaagggaac-----ccaccggagccg 127802 Query: 77 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 136 ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 127801 tagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgat 127742 Query: 137 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 196 |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| Sbjct: 127741 ctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgt 127682 Query: 197 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 256 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127681 tgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 127622 Query: 257 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 315 |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||| Sbjct: 127621 tggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagca 127562 Query: 316 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 375 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 127561 ctgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggta 127502 Query: 376 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 435 |||||| || ||| ||| | |||| ||||||||||||||||||||||||||||| Sbjct: 127501 tgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcatt 127442 Query: 436 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 127441 gtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcagtg 127386 Score = 650 bits (328), Expect = 0.0 Identities = 440/476 (92%), Gaps = 6/476 (1%) Strand = Plus / Plus Query: 17 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 76 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 95591 gaatgagccggcgactcataggcagtggcctggttaagggaac-----ccaccggagccg 95645 Query: 77 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 136 ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 95646 tagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgat 95705 Query: 137 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 196 |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| Sbjct: 95706 ctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgt 95765 Query: 197 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 256 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95766 tgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 95825 Query: 257 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 315 |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||| Sbjct: 95826 tggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagca 95885 Query: 316 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 375 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 95886 ctgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggta 95945 Query: 376 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 435 |||||| || ||| ||| | |||| ||||||||||||||||||||||||||||| Sbjct: 95946 tgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcatt 96005 Query: 436 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 491 |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 96006 gtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcagtg 96061
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 628 bits (317), Expect = e-177 Identities = 442/481 (91%), Gaps = 7/481 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 585 tgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccaccgga 639 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||||||| |||||| | |||| |||||||||||||||||||||||||||||| Sbjct: 640 gccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaacctggg 699 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 700 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 759 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 819 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 820 tagctggttctccccgaaatgcgttgaggcgcagcagttgactagactatctaggggtaa 879 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 880 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactg 939 Query: 372 gatatgacccaaaaataacag-gggtcaaggtcggccagtgagacgatgggggataagct 430 |||| ||| | ||||| || | || | |||| |||||||||| ||||||||||||| Sbjct: 940 gataggactccctaataatagagagtaagggtcaaccagtgagacagtgggggataagct 999 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 490 |||| |||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||| Sbjct: 1000 tcattgtcgagaggggaacagcccagatcaccggctaaggcccctaaatgaccgctaagt 1059 Query: 491 g 491 | Sbjct: 1060 g 1060
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 587 bits (296), Expect = e-164 Identities = 347/364 (95%), Gaps = 5/364 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4809 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccaccgga 4863 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 4864 gccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctggg 4923 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| Sbjct: 4924 tgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactg 4983 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4984 atgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaacccagagc 5043 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5044 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 5103 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 5104 gcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 5163 Query: 373 atat 376 |||| Sbjct: 5164 atat 5167 Score = 170 bits (86), Expect = 3e-39 Identities = 92/94 (97%) Strand = Plus / Plus Query: 401 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 461 ccagctaaggcccctaaatgaccgctcagtgata 494 ||||||||||||||||||||| |||||||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgata 5275
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 587 bits (296), Expect = e-164 Identities = 347/364 (95%), Gaps = 5/364 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 23116 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccaccgga 23062 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 23061 gccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctggg 23002 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| Sbjct: 23001 tgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactg 22942 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 22941 atgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaacccagagc 22882 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22881 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 22822 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 22821 gcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 22762 Query: 373 atat 376 |||| Sbjct: 22761 atat 22758 Score = 170 bits (86), Expect = 3e-39 Identities = 92/94 (97%) Strand = Plus / Minus Query: 401 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 461 ccagctaaggcccctaaatgaccgctcagtgata 494 ||||||||||||||||||||| |||||||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgata 22650
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 581 bits (293), Expect = e-163 Identities = 350/369 (94%), Gaps = 5/369 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5077 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccaccgga 5131 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 5132 gccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctggg 5191 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||||||||||||||| || | |||||||||| ||||||||||||||||| Sbjct: 5192 tgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactg 5251 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 5252 atgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagc 5311 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5312 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 5371 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 5372 gcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 5431 Query: 373 atatgaccc 381 ||||||||| Sbjct: 5432 atatgaccc 5440 Score = 172 bits (87), Expect = 7e-40 Identities = 100/103 (97%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 393 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 451 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 452 cccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 ||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgata 5547
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 581 bits (293), Expect = e-163 Identities = 350/369 (94%), Gaps = 5/369 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5077 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccaccgga 5131 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 5132 gccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctggg 5191 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||||||||||||||| || | |||||||||| ||||||||||||||||| Sbjct: 5192 tgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactg 5251 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 5252 atgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagc 5311 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5312 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 5371 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 5372 gcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 5431 Query: 373 atatgaccc 381 ||||||||| Sbjct: 5432 atatgaccc 5440 Score = 172 bits (87), Expect = 7e-40 Identities = 100/103 (97%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 393 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 451 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 452 cccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 ||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgata 5547
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 573 bits (289), Expect = e-160 Identities = 344/361 (95%), Gaps = 6/361 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| ||||||||||| | |||||||| Sbjct: 115630 tgaagaatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccgga 115576 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 115575 gccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctggg 115516 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 115515 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 115456 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115455 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 115396 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 115395 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 115336 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 115335 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 115276 Query: 372 g 372 | Sbjct: 115275 g 115275 Score = 573 bits (289), Expect = e-160 Identities = 344/361 (95%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| ||||||||||| | |||||||| Sbjct: 86490 tgaagaatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccgga 86544 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 86545 gccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctggg 86604 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 86605 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 86664 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86665 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 86724 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86725 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 86784 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 86785 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 86844 Query: 372 g 372 | Sbjct: 86845 g 86845 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtg 115155 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtg 86965
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 567 bits (286), Expect = e-158 Identities = 347/366 (94%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 4470 tgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccgga 4524 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 4525 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 4584 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 4585 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 4644 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4645 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 4704 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4705 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 4764 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4765 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 4824 Query: 372 gatatg 377 | |||| Sbjct: 4825 ggtatg 4830 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtg 4949
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 567 bits (286), Expect = e-158 Identities = 347/366 (94%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 580 tgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccgga 634 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 635 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 694 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 695 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 754 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 814 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 815 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 874 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 934 Query: 372 gatatg 377 | |||| Sbjct: 935 ggtatg 940 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtg 1059
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 567 bits (286), Expect = e-158 Identities = 347/366 (94%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 150665 tgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccgga 150611 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 150610 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 150551 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 150550 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 150491 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150490 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 150431 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 150430 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 150371 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150370 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150311 Query: 372 gatatg 377 | |||| Sbjct: 150310 ggtatg 150305 Score = 567 bits (286), Expect = e-158 Identities = 347/366 (94%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 118001 tgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccgga 118055 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 118056 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 118115 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 118116 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 118175 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118176 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 118235 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118236 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 118295 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 118296 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 118355 Query: 372 gatatg 377 | |||| Sbjct: 118356 ggtatg 118361 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Minus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtg 150186 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtg 118480
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 567 bits (286), Expect = e-158 Identities = 347/366 (94%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 580 tgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccgga 634 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 635 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 694 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 695 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 754 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 814 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 815 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaa 874 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 934 Query: 372 gatatg 377 | |||| Sbjct: 935 ggtatg 940 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtg 1059
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 553 bits (279), Expect = e-154 Identities = 318/331 (96%), Gaps = 5/331 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 108 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 162 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 163 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 222 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 223 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 282 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 342 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 343 tagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaa 402 Query: 313 gcactgtttcggtgcgggctgcgcgagcggt 343 ||||||||||||||||||| ||| ||||||| Sbjct: 403 gcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 549 bits (277), Expect = e-153 Identities = 344/364 (94%), Gaps = 3/364 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| | | |||||||| Sbjct: 564 tgaagaatgagccggcgacttataggcagtggcctggttaagggaaagaa--ccaccgga 621 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 622 gccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccgaacctggg 681 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 682 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 741 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 801 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 802 tagctggttctccccgaaatgcgttgaggcgcaacagttgactggactatctaggggtaa 861 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 862 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactg 921 Query: 372 gata 375 |||| Sbjct: 922 gata 925 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||||||||| |||| Sbjct: 1015 taaggcccctaaatgaccgctaagtg 1040
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 547 bits (276), Expect = e-152 Identities = 429/476 (90%), Gaps = 8/476 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||| | |||||||||||||||| |||| |||||||| Sbjct: 584 tgaagaatgagccggcgactcataagtagtggcttggttaagg----ggaa-ccaccgga 638 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 | | |||||||||| |||||| ||||||| | ||||| ||||||||||||||||| |||| Sbjct: 639 gtcatagcgaaagcaagtcttcatagggcaaatgtcattgcttatggacccgaacttggg 698 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| |||| |||||||||| ||||||||||||||||| Sbjct: 699 tgatctaaccatgaccaagatgaaatttggttgaaactaagtggaggtccgaaccgactg 758 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| Sbjct: 759 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcaaacccaaagc 818 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||| ||||||||||||||||||||| |||||||| |||| || |||||||||||||||| Sbjct: 819 tagttggttctccccgaaatgcgtttaggcgcagaagtt-accagacatctaggggtaaa 877 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||||||||||| |||| ||| |||| ||||||||| |||||||||| |||||||||| Sbjct: 878 gcactgtttcggttcgggtcgcgagagccgtaccaaattgaggcaaactatgaatactag 937 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||||||||| |||||||||||||| Sbjct: 938 atatgacctccaaaaataacagggataaaggtggaccagtgagaccatgggggataagct 997 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 486 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 998 tcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgct 1053
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 533 bits (269), Expect = e-148 Identities = 305/317 (96%), Gaps = 5/317 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 158 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 159 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 218 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 219 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 278 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 338 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 339 tagctggctctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaa 398 Query: 313 gcactgtttcggtgcgg 329 ||||||||||||||||| Sbjct: 399 gcactgtttcggtgcgg 415
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 529 bits (267), Expect = e-147 Identities = 430/482 (89%), Gaps = 8/482 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||| | ||| ||||||||||||| |||||||| Sbjct: 138687 tgaagaatgagccggcgacttataggcggcggcctggttaagggaac-----ccaccgga 138633 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||| | |||| ||||||||||||||||||| ||| Sbjct: 138632 gccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccggg 138573 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||| Sbjct: 138572 tgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactg 138513 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 138512 atgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagc 138453 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||||||| || | || | ||||| Sbjct: 138452 tagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaa 138393 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 ||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 138392 agcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactg 138333 Query: 372 gatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatgggggataagc 429 | |||| ||| | | | ||| |||| ||||||||||||||||||| |||||||||||| Sbjct: 138332 ggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataagc 138273 Query: 430 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 489 |||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 138272 ttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctcag 138213 Query: 490 tg 491 || Sbjct: 138212 tg 138211 Score = 529 bits (267), Expect = e-147 Identities = 430/482 (89%), Gaps = 8/482 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||| | ||| ||||||||||||| |||||||| Sbjct: 83190 tgaagaatgagccggcgacttataggcggcggcctggttaagggaac-----ccaccgga 83244 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||| | |||| ||||||||||||||||||| ||| Sbjct: 83245 gccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccggg 83304 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||| Sbjct: 83305 tgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactg 83364 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 83365 atgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagc 83424 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||||||| || | || | ||||| Sbjct: 83425 tagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaa 83484 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 ||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 83485 agcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactg 83544 Query: 372 gatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatgggggataagc 429 | |||| ||| | | | ||| |||| ||||||||||||||||||| |||||||||||| Sbjct: 83545 ggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataagc 83604 Query: 430 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 489 |||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 83605 ttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctcag 83664 Query: 490 tg 491 || Sbjct: 83665 tg 83666
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 502 bits (253), Expect = e-139 Identities = 259/261 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 75120 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 75061 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 75060 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 75001 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75000 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 74941 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74940 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 74881 Query: 253 tagctggttctccccgaaatg 273 ||||||||||||||||||||| Sbjct: 74880 tagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 502 bits (253), Expect = e-139 Identities = 259/261 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 382418 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 382477 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 382478 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 382537 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382538 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 382597 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382598 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 382657 Query: 253 tagctggttctccccgaaatg 273 ||||||||||||||||||||| Sbjct: 382658 tagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 502 bits (253), Expect = e-139 Identities = 259/261 (99%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 113211 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 113152 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 113151 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 113092 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113091 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 113032 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113031 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 112972 Query: 253 tagctggttctccccgaaatg 273 ||||||||||||||||||||| Sbjct: 112971 tagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 502 bits (253), Expect = e-139 Identities = 262/265 (98%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 367893 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 367834 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 367833 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 367774 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367773 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 367714 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367713 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 367654 Query: 253 tagctggttctccccgaaatgcgtt 277 |||||||||||||||||||| |||| Sbjct: 367653 tagctggttctccccgaaattcgtt 367629 Score = 502 bits (253), Expect = e-139 Identities = 262/265 (98%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 184498 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgga 184439 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 184438 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 184379 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184378 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 184319 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184318 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 184259 Query: 253 tagctggttctccccgaaatgcgtt 277 |||||||||||||||||||| |||| Sbjct: 184258 tagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 gtcgagagggaaacagcccggatc 459 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 490 bits (247), Expect = e-135 Identities = 337/363 (92%), Gaps = 3/363 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| ||||| ||||||||| | ||||| ||||| Sbjct: 144500 tgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccgga 144557 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| | |||| |||||||| |||||| ||||||||||||| Sbjct: 144558 gccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctggg 144617 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 144618 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 144677 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144678 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 144737 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 144738 tagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaa 144797 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 144798 agcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 144857 Query: 372 gat 374 ||| Sbjct: 144858 gat 144860 Score = 490 bits (247), Expect = e-135 Identities = 337/363 (92%), Gaps = 3/363 (0%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| ||||| ||||||||| | ||||| ||||| Sbjct: 88351 tgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccgga 88294 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| | |||| |||||||| |||||| ||||||||||||| Sbjct: 88293 gccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctggg 88234 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 88233 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 88174 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88173 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 88114 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaa 311 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 88113 tagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaa 88054 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 88053 agcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 87994 Query: 372 gat 374 ||| Sbjct: 87993 gat 87991 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 466 taaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtg 144984 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 466 taaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtg 87867
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 490 bits (247), Expect = e-135 Identities = 340/367 (92%), Gaps = 8/367 (2%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 5967 tgaagaatgagccggcgacttataggcagtggcttggttaagggcac-----ccaccgga 5913 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgctt-atggacccgaacctgg 131 |||||||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct: 5912 gccgtagcgagagcgagtcttcatagggcaattgtcactgctttatggacccgaacctgg 5853 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 5852 gtgatctatccatgaccaggatgaagct-ggatgaaactaagtagaggtccgaaccgact 5794 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5793 gatgttgcaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 5734 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggta 310 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 5733 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggta 5674 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||| ||| | | |||||||| | ||||||||||||| |||||||| Sbjct: 5673 aagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactatgaatact 5614 Query: 371 agatatg 377 ||||||| Sbjct: 5613 agatatg 5607 Score = 131 bits (66), Expect = 2e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 460 accagctaaggcccctaaatgaccgctcagtgat 493 ||||| |||||||||||||||||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgat 5509
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 452 bits (228), Expect = e-124 Identities = 258/268 (96%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 553 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 607 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 608 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 667 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 668 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 727 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 787 Query: 253 tagctggttctccccgaaatgcgttgag 280 |||||||||||||||||||||||||||| Sbjct: 788 tagctggttctccccgaaatgcgttgag 815
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 448 bits (226), Expect = e-123 Identities = 333/366 (90%), Gaps = 7/366 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| |||||| | Sbjct: 582 tgaagaatgagccggcgacttataggcagtggcatggttaagggaat-----ccaccgaa 636 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 637 gccatagcgaaagcaagtctttc-agggcgattgtcactgtttatggacccgaacccggg 695 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 696 tgatctatccatgaccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgactg 755 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 756 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaactcggagc 815 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||||| Sbjct: 816 tagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaa 875 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 876 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatacta 935 Query: 372 gatatg 377 ||||| Sbjct: 936 aatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 465 ctaaggcccctaaat 479 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 448 bits (226), Expect = e-123 Identities = 333/366 (90%), Gaps = 7/366 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| |||||| | Sbjct: 3616 tgaagaatgagccggcgacttataggcagtggcatggttaagggaat-----ccaccgaa 3670 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 3671 gccatagcgaaagcaagtctttc-agggcgattgtcactgtttatggacccgaacccggg 3729 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 3730 tgatctatccatgaccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgactg 3789 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 3790 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaactcggagc 3849 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||||| Sbjct: 3850 tagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaa 3909 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 3910 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatacta 3969 Query: 372 gatatg 377 ||||| Sbjct: 3970 aatatg 3975 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 465 ctaaggcccctaaat 479 |||||||||||||| Sbjct: 4045 ttaaggcccctaaat 4059
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 444 bits (224), Expect = e-121 Identities = 329/361 (91%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| ||||||||| | ||| || ||| Sbjct: 580 tgaagaatgagccggcgacttataggcagtggcctggttaaggcga--gaagcc---gga 634 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct: 635 gccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccggg 694 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||||||| Sbjct: 695 tgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactg 754 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 755 atgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagc 814 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 815 tagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaa 874 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatacta 934 Query: 372 g 372 | Sbjct: 935 g 935 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtg 1037
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 444 bits (224), Expect = e-121 Identities = 329/361 (91%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| ||||||||| | ||| || ||| Sbjct: 593 tgaagaatgagccggcgacttataggcagtggcctggttaaggcga--gaagcc---gga 647 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct: 648 gccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccggg 707 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||||||| Sbjct: 708 tgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactg 767 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 768 atgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagc 827 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 828 tagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaa 887 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 888 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatacta 947 Query: 372 g 372 | Sbjct: 948 g 948 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtg 1050
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 442 bits (223), Expect = e-121 Identities = 317/347 (91%), Gaps = 1/347 (0%) Strand = Plus / Minus Query: 148 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 207 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 208 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 267 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 268 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 327 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 328 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 387 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 388 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 447 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 448 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 494 ||| || |||||||||||||||||||||||||||| ||||||||||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgata 2766 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%), Gaps = 5/117 (4%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 3231 tgaagaatgagccgacgactcataggcagtggcttggttaagggaac-----ccaccgga 3177 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 ||| ||||||||||||||| ||| |||| ||| ||||||||||||||||||||||| Sbjct: 3176 gccatagcgaaagcgagtcagaatggggcaattctcactgcttatggacccgaacct 3120
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 440 bits (222), Expect = e-120 Identities = 330/362 (91%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacg-gaacccaccgg 71 |||||||||||||||||||| |||||||||||| ||||||||| || ||| || || Sbjct: 697 tgaagaatgagccggcgacttataggcagtggcctggttaagg---cgtgaagcc---gg 750 Query: 72 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 131 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 751 agccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgg 810 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||| Sbjct: 811 gtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgact 870 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 871 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 930 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 310 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 931 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 990 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 991 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1050 Query: 371 ag 372 || Sbjct: 1051 ag 1052 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 400 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 459 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 460 accagctaaggcccctaaatgaccgctcagtg 491 |||||||||||||||||||||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtg 1154
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 440 bits (222), Expect = e-120 Identities = 333/367 (90%), Gaps = 6/367 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||| | |||||| ||||||||| |||| |||||||| Sbjct: 597 tgaagaatgagccggcgactcataagtagtggcctggttaagg----ggaa-ccaccgga 651 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| ||||||| | ||||| |||||||| |||||||| |||| Sbjct: 652 gccatagcgaaagcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttggg 711 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| |||||||||||||||| |||| |||||||||| ||||||||||||||||| Sbjct: 712 tgatctaaccatgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgactg 771 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 772 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagc 831 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||| Sbjct: 832 tagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatctaggggtaaa 890 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 |||||||||||||||||| || |||||||||||||| |||||||||| |||||||||| Sbjct: 891 gcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatgaatactag 950 Query: 373 atatgac 379 ||||||| Sbjct: 951 atatgac 957 Score = 133 bits (67), Expect = 6e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 404 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 463 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 464 gctaaggcccctaaatgaccgct 486 ||||||||||||||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgct 1082
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 440 bits (222), Expect = e-120 Identities = 332/366 (90%), Gaps = 7/366 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| |||||| | Sbjct: 582 tgaagaatgagccggcgacttataggcagtggcatggttaagggaat-----ccaccgaa 636 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 637 gccatagcgaaagcaagtctttc-agggcgattgtcactgtttatggacccgaacccggg 695 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 |||||||||||||||||||||||||||||| | |||| ||| ||||||||||||||||| Sbjct: 696 tgatctatccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactg 755 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 756 atgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaactcggagc 815 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||||| Sbjct: 816 tagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaa 875 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 876 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatacta 935 Query: 372 gatatg 377 ||||| Sbjct: 936 aatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 465 ctaaggcccctaaat 479 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 438 bits (221), Expect = e-120 Identities = 328/361 (90%), Gaps = 7/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 582 tgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt-----caccgga 636 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 637 gccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccggg 695 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 696 tgatctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgactg 755 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | |||| Sbjct: 756 atgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagc 815 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||||| Sbjct: 816 tagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaa 875 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 876 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatacta 935 Query: 372 g 372 | Sbjct: 936 g 936 Score = 133 bits (67), Expect = 6e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 465 ctaaggcccctaaatgaccgctcagtg 491 ||||||||||||||||||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtg 1039
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 422 bits (213), Expect = e-115 Identities = 326/361 (90%), Gaps = 7/361 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 124683 tgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt-----caccgga 124629 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 124628 gccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccggg 124570 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||| |||||||||||||||| |||| | ||| ||||||||||||||||| Sbjct: 124569 tgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgactg 124510 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | |||| Sbjct: 124509 atgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagc 124450 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||||| Sbjct: 124449 tagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaa 124390 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 124389 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatacta 124330 Query: 372 g 372 | Sbjct: 124329 g 124329 Score = 422 bits (213), Expect = e-115 Identities = 326/361 (90%), Gaps = 7/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct: 95183 tgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt-----caccgga 95237 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 95238 gccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccggg 95296 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||| |||||||||||||||| |||| | ||| ||||||||||||||||| Sbjct: 95297 tgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgactg 95356 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | |||| Sbjct: 95357 atgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagc 95416 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||||| Sbjct: 95417 tagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaa 95476 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 95477 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatacta 95536 Query: 372 g 372 | Sbjct: 95537 g 95537 Score = 133 bits (67), Expect = 6e-28 Identities = 82/87 (94%) Strand = Plus / Minus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 465 ctaaggcccctaaatgaccgctcagtg 491 ||||||||||||||||||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtg 124226 Score = 133 bits (67), Expect = 6e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 465 ctaaggcccctaaatgaccgctcagtg 491 ||||||||||||||||||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtg 95640
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 410 bits (207), Expect = e-111 Identities = 323/359 (89%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||| Sbjct: 4626 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-accgga 4684 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| ||| Sbjct: 4685 gccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccggg 4744 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| | Sbjct: 4745 tgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccg 4804 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||| Sbjct: 4805 atgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagc 4864 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 |||||||||||||||||||||||||||||||||||| || |||| || ||| |||||||| Sbjct: 4865 tagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaa 4924 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 4925 agcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 468 aggcccctaaatgaccgctcagtg 491 ||||||||||||| ||||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtg 5088
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 410 bits (207), Expect = e-111 Identities = 323/359 (89%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||| Sbjct: 593 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-accgga 651 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| ||| Sbjct: 652 gccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccggg 711 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| | Sbjct: 712 tgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccg 771 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||| Sbjct: 772 atgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagc 831 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 |||||||||||||||||||||||||||||||||||| || |||| || ||| |||||||| Sbjct: 832 tagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaa 891 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 892 agcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 468 aggcccctaaatgaccgctcagtg 491 ||||||||||||| ||||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtg 1055
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 410 bits (207), Expect = e-111 Identities = 323/359 (89%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||| | || |||||| Sbjct: 593 tgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-accgga 651 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| ||| Sbjct: 652 gccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccggg 711 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| | Sbjct: 712 tgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccg 771 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||| Sbjct: 772 atgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagc 831 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 |||||||||||||||||||||||||||||||||||| || |||| || ||| |||||||| Sbjct: 832 tagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaa 891 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 892 agcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 468 aggcccctaaatgaccgctcagtg 491 ||||||||||||| ||||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtg 1055
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 392 bits (198), Expect = e-106 Identities = 213/218 (97%) Strand = Plus / Plus Query: 60 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 119 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 81 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 140 Query: 120 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 179 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 141 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 200 Query: 180 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 260 Query: 240 tcgaacccagagctagctggttctccccgaaatgcgtt 277 |||||||||||||||||||||||||||||||||||||| Sbjct: 261 tcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 349 bits (176), Expect = 5e-93 Identities = 194/200 (97%) Strand = Plus / Plus Query: 295 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 354 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 355 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 414 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 415 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 475 taaatgaccgctcagtgata 494 ||||||| |||||||||||| Sbjct: 497 taaatgatcgctcagtgata 516
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 559 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 613 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 614 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 673 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 674 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 733 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 734 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 793 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 794 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 852 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 853 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 912 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 913 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 972 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 973 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1025
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 391 bits (197), Expect = e-105 Identities = 407/473 (86%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 332/375 (88%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 111 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 170 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 171 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 230 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 231 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 290 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 291 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 350 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 351 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 408 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 409 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 468 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 469 ggcccctaaatgacc 483 ||||||||||||||| Sbjct: 1012 ggcccctaaatgacc 1026 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaaggg 56 |||||||||||||||| ||||||| | ||||| |||||||||| Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg 603
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 389 bits (196), Expect = e-105 Identities = 324/364 (89%), Gaps = 2/364 (0%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||| ||||||| ||||||||||| | | || ||| Sbjct: 588 tgaagaatgagccggcgactcatagatagtggctgggttaagggaatttatgc-actgga 646 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| ||||| |||||||||| |||||||||||||| ||| Sbjct: 647 gccatagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaacccggg 706 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||||| |||||||||| ||||||| ||||||| | Sbjct: 707 tgatctaaccatggccaggatgaagcttgggtgaaactaagtggaggtcccaaccgaccg 766 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||| Sbjct: 767 atgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagc 826 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 |||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||| Sbjct: 827 tagctggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggtaa 886 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 887 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatactg 946 Query: 372 gata 375 |||| Sbjct: 947 gata 950 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 468 aggcccctaaatgaccgctcagtg 491 ||||||||||||| ||||| |||| Sbjct: 1027 aggcccctaaatggccgctaagtg 1050
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 385 bits (194), Expect = e-103 Identities = 324/363 (89%), Gaps = 7/363 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||||||||||| |||||||| | | || |||||| Sbjct: 579 tgaagaatgagccggcgacttataggcagtggctaggttaaggta-caaaa---accgga 634 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| Sbjct: 635 gccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccggg 693 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||| | ||||||| || || |||||||||||| | Sbjct: 694 tgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccg 753 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| |||||||||||||||||||||||||||||||| |||||| | |||| Sbjct: 754 atgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagc 813 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggta 310 ||||||||||||||||||||||||||||||||||| |||| | || |||||||||| Sbjct: 814 tagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggta 873 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 874 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatact 933 Query: 371 aga 373 ||| Sbjct: 934 aga 936 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||| ||||| |||| Sbjct: 1012 taaggcccctaaatggccgctaagtg 1037
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 385 bits (194), Expect = e-103 Identities = 324/363 (89%), Gaps = 7/363 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||||||||||| |||||||| | | || |||||| Sbjct: 115083 tgaagaatgagccggcgacttataggcagtggctaggttaaggta-caaaa---accgga 115028 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| Sbjct: 115027 gccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccggg 114969 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||| | ||||||| || || |||||||||||| | Sbjct: 114968 tgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccg 114909 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| |||||||||||||||||||||||||||||||| |||||| | |||| Sbjct: 114908 atgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagc 114849 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggta 310 ||||||||||||||||||||||||||||||||||| |||| | || |||||||||| Sbjct: 114848 tagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggta 114789 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 114788 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatact 114729 Query: 371 aga 373 ||| Sbjct: 114728 aga 114726 Score = 385 bits (194), Expect = e-103 Identities = 324/363 (89%), Gaps = 7/363 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||||||||||| |||||||| | | || |||||| Sbjct: 86905 tgaagaatgagccggcgacttataggcagtggctaggttaaggta-caaaa---accgga 86960 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| Sbjct: 86961 gccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccggg 87019 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||| | ||||||| || || |||||||||||| | Sbjct: 87020 tgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccg 87079 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| |||||||||||||||||||||||||||||||| |||||| | |||| Sbjct: 87080 atgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagc 87139 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggta 310 ||||||||||||||||||||||||||||||||||| |||| | || |||||||||| Sbjct: 87140 tagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggta 87199 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 87200 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatact 87259 Query: 371 aga 373 ||| Sbjct: 87260 aga 87262 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||| ||||| |||| Sbjct: 114650 taaggcccctaaatggccgctaagtg 114625 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||| ||||| |||| Sbjct: 87338 taaggcccctaaatggccgctaagtg 87363
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 383 bits (193), Expect = e-103 Identities = 406/473 (85%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 559 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 613 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 614 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 673 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| || || Sbjct: 674 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagattg 733 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 734 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 793 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 794 tagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaa 852 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 853 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 912 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 913 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 972 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 973 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1025
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 383 bits (193), Expect = e-103 Identities = 407/473 (86%), Gaps = 9/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagc-gtt-accagacctctaggggtaaa 852 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 853 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 912 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 913 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 972 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 973 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1025
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 383 bits (193), Expect = e-103 Identities = 406/473 (85%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| || ||| || ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagtcgtt-accagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-101 Identities = 405/473 (85%), Gaps = 8/473 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||| ||||||| | ||||| |||||||||| ||| | || || Sbjct: 560 tgaagaatgagccggcaactcataagtagtggactggttaaggg----gaatcg-ccaga 614 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||| |||| |||||| ||||| | | || || |||||||||||| ||| || | Sbjct: 615 gccatagcaaaagtaagtcttcataggacaaatgccattgcttatggaccagaatttgag 674 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||||||| |||||| || | |||||||||| ||||||||||| ||||| Sbjct: 675 tgatctaaccatgaccaagatgaaatttagttgaaactaagtggaggtccgaacagactg 734 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 735 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgtcaatcgaacccaaagc 794 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 ||||||||||||||||||||||||| ||||| ||| | | | ||| |||||||||||| Sbjct: 795 tagctggttctccccgaaatgcgtttaggcggagccg-tatccagacctctaggggtaaa 853 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| ||| Sbjct: 854 gcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattag 913 Query: 373 atatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 430 ||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||||| Sbjct: 914 atatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagct 973 Query: 431 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 483 ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| Sbjct: 974 tcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgacc 1026
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 367 bits (185), Expect = 2e-98 Identities = 322/367 (87%), Gaps = 8/367 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||| |||||||| |||||||||| | |||| | Sbjct: 986 tgaagaatgagccggcgacttataagcagtggcctggttaagggtat-------accgaa 1038 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||| | |||||| |||||||| ||||||||||||||| ||| Sbjct: 1039 gccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccggg 1098 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||| ||||| |||||||||| |||| | ||| |||| |||||||||||| Sbjct: 1099 tgatctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgactg 1158 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 1159 gtgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggagc 1218 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| |||||| || | ||||||||| Sbjct: 1219 tagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggtaa 1278 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1279 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatacta 1338 Query: 372 gatatga 378 || |||| Sbjct: 1339 gacatga 1345 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 407 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 466 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 467 aaggcccctaaatgaccgctcagtg 491 ||||||||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtg 1442
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 357 bits (180), Expect = 2e-95 Identities = 321/366 (87%), Gaps = 9/366 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||| | |||||| |||||||| ||| || ||| Sbjct: 539 tgaagaatgagccggcgacttataagtagtggcctggttaagagaat-------actgga 591 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 |||||||||||||| |||| || | || || |||||||| |||| |||||||||| ||| Sbjct: 592 gccgtagcgaaagcaagtcatatttgg-cgcatgtcactgtttatagacccgaacccggg 650 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||||||||| ||||| |||| ||||| |||| | ||| ||||||||||||||||| Sbjct: 651 tgatctatccatggccagggtgaaacttgggtgaagccaagtggaggtccgaaccgactg 710 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 711 atgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagc 770 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaa 311 ||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||| Sbjct: 771 tagctggttctccccgaaatgcgttgaggcgcagcgattgattggactacttaggggtaa 830 Query: 312 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 831 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatacta 890 Query: 372 gatatg 377 | |||| Sbjct: 891 ggtatg 896 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 407 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 466 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 467 aaggcccctaaatgaccgctcagtgata 494 |||||||| ||||||||||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgata 999
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 353 bits (178), Expect = 3e-94 Identities = 322/367 (87%), Gaps = 6/367 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||| |||||||||||| | |||||| ||||||||| |||| |||||||| Sbjct: 572 tgaagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccaccgga 626 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| |||||||||| |||||| |||||| | ||||| ||||| ||||||||||| |||| Sbjct: 627 gccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaacttggg 686 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| |||||||||||||| | |||| | |||||||| | |||| |||||||||| Sbjct: 687 tgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccgactg 746 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 747 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagc 806 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 312 |||||||||| ||||||||||| || ||||||||||||| || || |||||||||||||| Sbjct: 807 tagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctaggggtaaa 865 Query: 313 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 372 ||| ||||| |||||||| || |||||||||||||| |||||| ||| |||||||||| Sbjct: 866 gcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatgaatactag 925 Query: 373 atatgac 379 ||||||| Sbjct: 926 atatgac 932 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 382 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 441 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 442 agggaaacagcccggatcaccagctaaggcccctaaatgaccgct 486 |||| |||| || |||||| ||||||| |||||||||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgct 1048
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 345 bits (174), Expect = 8e-92 Identities = 320/365 (87%), Gaps = 9/365 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||| |||||||||||||||| ||| | ||||| Sbjct: 645 tgaagaatgagccggcgacttataaaaagtggcttggttaagga----gaatcatccgga 700 Query: 73 gccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctg 130 ||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||| | Sbjct: 701 gccagagcgaaagcaagtcttaatagggcgattttgtcactttttatggacccgaacccg 760 Query: 131 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 190 ||||||||| |||||||||||||||||||||| | |||| ||| || |||||||||||| Sbjct: 761 ggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagtccgaaccgac 820 Query: 191 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 250 ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 821 cgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaacccgga 880 Query: 251 gctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg-gacatctaggg 307 ||||||||||||||||||||||||||||||||||||| ||||| || | ||||||| Sbjct: 881 gctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggg 940 Query: 308 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 367 |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| Sbjct: 941 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaat 1000 Query: 368 actag 372 ||||| Sbjct: 1001 actag 1005 Score = 107 bits (54), Expect = 3e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 466 taaggcccctaaatgaccgctcagtg 491 |||||||||| |||| ||||| |||| Sbjct: 1083 taaggcccctgaatggccgctaagtg 1108
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 125 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 126 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 185 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 186 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 245 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 246 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 301 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 302 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 361 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 362 ctgaatactag 372 ||||||||| Sbjct: 932 aagaatactag 942 Score = 145 bits (73), Expect = 2e-31 Identities = 85/89 (95%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 466 taaggcccctaaatgaccgctcagtgata 494 ||||||||||||||| ||||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgata 1048 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| |||| |||||||||||||||| Sbjct: 581 tgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 67 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 126 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 127 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 186 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 187 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 246 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 247 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 305 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 306 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 365 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 366 atactagatatga 378 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 465 ctaaggcccctaaatgaccgctcagtgata 494 ||||||||||||||||||||| ||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgata 1004 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 545 tgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 8e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 60 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 119 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 120 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 179 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 180 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 315 bits (159), Expect = 8e-83 Identities = 315/364 (86%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||| |||||||||||||||| || | || ||| Sbjct: 729 tgaagaatgagccggcgacttataaagagtggcttggttaaggaaaaaaatcc----gga 784 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct: 785 gccaaagcgaaagcaagtcttaatagggctcaggtcactctttatggacccgaacccggg 844 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| |||||||||||||||||||| | | |||| || || |||||||||||| | Sbjct: 845 tgatctaaccatgaccaggatgaagcttcggtaaaacggagtggaagtccgaaccgaccg 904 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| |||||||||||||||||||||||||||||||| |||||| | |||| Sbjct: 905 atgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagc 964 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggta 310 ||||||||||||||||||||||||||||||||||| ||| || ||| | |||||||||| Sbjct: 965 tagctggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggta 1024 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 1025 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 1084 Query: 371 agat 374 |||| Sbjct: 1085 agat 1088 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 466 taaggcccctaaatgaccgctcagtg 491 |||||||||| |||| ||||| |||| Sbjct: 1163 taaggcccctcaatggccgctaagtg 1188
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 176 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 235 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 236 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 295 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 296 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 355 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 356 caaactctgaatactagatat 376 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 103 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 162 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 163 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 222 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 223 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 282 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 283 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 339 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 340 cggtaccaaatcgaggcaaactctgaatactaga 373 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 708 tgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 119 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 178 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 179 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 238 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 239 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 297 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 298 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 356 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 357 aaactctgaatactagatatgac 379 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 468 aggcccctaaatg 480 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 72 agccgtagcgaaagcgagtcttaatagggcgat 104 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgact 32 |||||||||||||||||||| Sbjct: 6250 tgaagaatgagccggcgact 6269
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 299 bits (151), Expect = 4e-78 Identities = 151/151 (100%) Strand = Plus / Minus Query: 344 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 404 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 464 gctaaggcccctaaatgaccgctcagtgata 494 ||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgata 369
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 119 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 178 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 179 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 238 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 239 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 297 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 298 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 356 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 357 aaactctgaatactagatatgac 379 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 468 aggcccctaaatg 480 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 72 agccgtagcgaaagcgagtcttaatagggcgat 104 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgact 32 |||||||||||||||||||| Sbjct: 3313 tgaagaatgagccggcgact 3332
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 119 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 178 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 179 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 238 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 239 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 297 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 298 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 356 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 357 aaactctgaatactagatatgac 379 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 468 aggcccctaaatg 480 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 72 agccgtagcgaaagcgagtcttaatagggcgat 104 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgact 32 |||||||||||||||||||| Sbjct: 601 tgaagaatgagccggcgact 620
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 297 bits (150), Expect = 2e-77 Identities = 312/361 (86%), Gaps = 5/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||| |||||||| || | | || ||| Sbjct: 2395 tgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg--atttactgga 2451 Query: 73 gccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctgg 131 ||| |||||||||||||| ||||||| ||| || |||||| |||| |||||||||| || Sbjct: 2452 gccatagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacccgg 2511 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||| ||||| ||||| |||||||| | | ||||||| |||| ||||||||| Sbjct: 2512 gtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccgatc 2571 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 2572 gatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccggag 2631 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggta 310 |||||||||||||||||||||||||||||||||||| ||||| | || |||||||| Sbjct: 2632 ctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggggta 2691 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 2692 aagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaatact 2751 Query: 371 a 371 | Sbjct: 2752 a 2752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 478 at 479 || Sbjct: 2838 at 2839
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 297 bits (150), Expect = 2e-77 Identities = 312/361 (86%), Gaps = 5/361 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||| |||||||| || | | || ||| Sbjct: 114853 tgaagaatgagccggcgacttataggtagtggca-ggttaaggtaaagaatt--actgga 114797 Query: 73 gccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctgg 131 ||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| || Sbjct: 114796 gccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgg 114737 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | Sbjct: 114736 gtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgatt 114677 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 114676 aatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggag 114617 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 310 |||||||||||||||||||||| ||||||||||||| ||||| | | | |||||||| Sbjct: 114616 ctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggta 114557 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 114556 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 114497 Query: 371 a 371 | Sbjct: 114496 a 114496 Score = 297 bits (150), Expect = 2e-77 Identities = 312/361 (86%), Gaps = 5/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||| |||||||| || | | || ||| Sbjct: 2664 tgaagaatgagccggcgacttataggtagtggca-ggttaaggtaaagaatt--actgga 2720 Query: 73 gccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctgg 131 ||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| || Sbjct: 2721 gccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgg 2780 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | Sbjct: 2781 gtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgatt 2840 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 2841 aatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggag 2900 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 310 |||||||||||||||||||||| ||||||||||||| ||||| | | | |||||||| Sbjct: 2901 ctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggta 2960 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2961 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 3020 Query: 371 a 371 | Sbjct: 3021 a 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 465 ctaaggcccctaaat 479 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 465 ctaaggcccctaaat 479 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 4e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 69 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 128 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 129 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 188 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 189 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 248 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 249 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 308 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 309 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 368 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 369 ct 370 || Sbjct: 2489 ct 2490 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 466 taaggcccctaaat 479 |||||||||||||| Sbjct: 2565 taaggcccctaaat 2578 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||| |||||| Sbjct: 2138 tgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 106 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 165 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 166 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 225 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 226 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 285 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 286 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 342 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 343 taccaaatcgaggcaaactctgaatactaga 373 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 147 bits (74), Expect = 4e-32 Identities = 83/86 (96%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||||||||| |||| Sbjct: 1026 taaggcccctaaatgaccgctaagtg 1051 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaa 53 |||||||||||||||||||| ||| | |||||||||||||| Sbjct: 587 tgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 125 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 126 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 185 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 186 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 245 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 246 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 304 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 365 aatactagata 375 ||||||||||| Sbjct: 921 aatactagata 931 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 465 ctaaggcccctaaatga 481 |||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatga 1020 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgact 32 |||||||||||||||||||| Sbjct: 570 tgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 125 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 126 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 185 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 186 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 245 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 246 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 304 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 365 aatactagata 375 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 465 ctaaggcccctaaatga 481 |||||||||| |||||| Sbjct: 25813 ctaaggccccaaaatga 25829 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgact 32 |||||||||||||||||||| Sbjct: 25379 tgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 127 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 128 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 187 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 188 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 247 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 248 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 306 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 307 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 366 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 367 tac 369 ||| Sbjct: 549 tac 551 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 465 ctaaggcccctaaatg 480 |||||| ||| ||||| Sbjct: 626 ctaaggtcccaaaatg 641 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcatagg 38 |||||||||||||||||||| ||||| Sbjct: 199 tgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 72 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 131 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 308 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 309 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 368 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 369 ctaga 373 ||||| Sbjct: 935 ctaga 939 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||| ||||| |||| Sbjct: 1017 taaggcccctaaatggccgctaagtg 1042 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaa 53 |||||||||||||||||||| ||||| |||||||||||||| Sbjct: 578 tgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 136 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 137 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 196 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 197 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 256 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 257 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 313 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 314 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 3e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 466 taaggcccctaaat 479 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 72 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 131 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 308 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 309 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 368 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 369 ctaga 373 ||||| Sbjct: 2817 ctaga 2821 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||| ||||| |||| Sbjct: 2899 taaggcccctaaatggccgctaagtg 2924 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaa 53 |||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2460 tgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 281 bits (142), Expect = 1e-72 Identities = 312/365 (85%), Gaps = 9/365 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||| || | ||||||||||||||||| ||| | ||| | Sbjct: 555 tgaagaatgagccggcgactcctaagaagtggcttggttaaggg---ggattac-ccgaa 610 Query: 73 gccgtagcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaacctg 130 ||| ||||||||| ||||| |||||||| | | |||||| ||| ||||||||||| | Sbjct: 611 gccaaagcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaacccg 670 Query: 131 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 190 ||||||||| ||||| |||||||||||||||| | |||| ||| ||||||||||||||| Sbjct: 671 ggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgac 730 Query: 191 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 250 ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||| | || Sbjct: 731 cgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcgga 790 Query: 251 gctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggg 307 ||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||| Sbjct: 791 gctagctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggg 850 Query: 308 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 367 ||||||||||||||||||||||||| || || |||||||||||| ||||||| |||| Sbjct: 851 gtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaat 910 Query: 368 actag 372 ||||| Sbjct: 911 actag 915 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||| |||| ||||| |||| Sbjct: 993 taaggccccagaatggccgctaagtg 1018
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 81 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 140 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 141 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 200 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 201 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 260 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 261 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 319 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 320 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 81 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 140 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 141 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 200 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 201 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 260 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 261 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 319 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 320 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 466 taaggcccctaaat 479 |||||||||||||| Sbjct: 189932 taaggcccctaaat 189945 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 466 taaggcccctaaat 479 |||||||||||||| Sbjct: 151359 taaggcccctaaat 151372 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcatag 37 |||||||||||||||||||| |||| Sbjct: 189503 tgaagaatgagccggcgacttatag 189527 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcatag 37 |||||||||||||||||||| |||| Sbjct: 150930 tgaagaatgagccggcgacttatag 150954
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 278 bits (140), Expect = 2e-71 Identities = 143/144 (99%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 544 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 545 gccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctggg 604 Query: 133 tgatctatccatgaccaggatgaa 156 |||||||||||||||||||||||| Sbjct: 605 tgatctatccatgaccaggatgaa 628
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 478 at 479 || Sbjct: 5585 at 5584 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 6026 tgaagaatgagccggcgacttataggcactggc 5994
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 478 at 479 || Sbjct: 212187 at 212188 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 211746 tgaagaatgagccggcgacttataggcactggc 211778
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 433 tgaagaatgagccggcgacttataggcactggc 465
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 256/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 81 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 140 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 188644 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 188703 Query: 141 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 200 ||||| ||||| |||||||| | | | |||||| |||||||||||||||| |||||||| Sbjct: 188704 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactaatgttgaa 188763 Query: 201 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 260 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 188764 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 188823 Query: 261 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 318 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 188824 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 188882 Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188883 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 266 bits (134), Expect = 6e-68 Identities = 255/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 81 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 140 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150201 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 150260 Query: 141 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 200 ||||| ||||| |||||||| | | | |||||| ||||||||| |||||| |||||||| Sbjct: 150261 ccatggccagggtgaagcttaggtaacactaagtggaggtccgagccgactaatgttgaa 150320 Query: 201 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 260 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 150321 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 150380 Query: 261 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 318 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 150381 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 150439 Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 371 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150440 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 468 aggcccctaaat 479 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 408 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 467 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 468 aggcccctaaat 479 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 114 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 173 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 174 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 233 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 234 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 293 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 294 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 350 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 351 cgaggcaaactctgaatact 370 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 123 bits (62), Expect = 6e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 466 taaggcccctaaat 479 |||||||||||||| Sbjct: 1025 taaggcccctaaat 1038
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 114 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 173 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 174 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 233 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 234 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 293 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 294 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 350 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 351 cgaggcaaactctgaatact 370 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 123 bits (62), Expect = 6e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 466 taaggcccctaaat 479 |||||||||||||| Sbjct: 2763 taaggcccctaaat 2776
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 122 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 123 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 182 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 183 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 242 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 243 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 299 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 300 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 358 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 359 actctgaatactagata 375 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 440 agagggaaacagcccggatcaccagctaaggcccctaaatg 480 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 ||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 711 tgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 122 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 123 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 182 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 183 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 242 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 243 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 299 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 300 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 358 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 359 actctgaatactagata 375 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 440 agagggaaacagcccggatcaccagctaaggcccctaaatg 480 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 ||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 711 tgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 6e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 81 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 140 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 141 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 200 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 201 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 260 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 261 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 317 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 318 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 465 ctaaggcccctaaatgaccgctcagtgata 494 |||||| ||| |||| | |||| ||||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgata 655 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggca 40 |||||||||||||||||||| ||||||| Sbjct: 199 tgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 6e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 127 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 128 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 187 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 188 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 247 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 248 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 304 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 365 aatactag 372 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 6e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 127 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 128 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 187 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 188 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 247 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 248 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 304 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 365 aatactag 372 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 466 taaggcccctaaatg 480 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 466 taaggcccctaaatg 480 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137068 tgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48476 tgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 266 bits (134), Expect = 6e-68 Identities = 308/362 (85%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||||||||||||| || || |||||| Sbjct: 192444 tgaagaatgagccggcgacttatagggagtggcttggttaaggtaa---aat--accgga 192498 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| | | Sbjct: 192499 gccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaacccgag 192558 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||| ||||| | | || || || | |||||||||| | Sbjct: 192559 tgatctaaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccg 192618 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||| Sbjct: 192619 atgttgaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcggagc 192678 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggt 309 ||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || ||||||| Sbjct: 192679 tagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggggt 192738 Query: 310 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 192739 aaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatac 192798 Query: 370 ta 371 || Sbjct: 192799 ta 192800 Score = 266 bits (134), Expect = 6e-68 Identities = 308/362 (85%), Gaps = 8/362 (2%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||||||||||||| || || |||||| Sbjct: 144338 tgaagaatgagccggcgacttatagggagtggcttggttaaggtaa---aat--accgga 144284 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| | | Sbjct: 144283 gccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaacccgag 144224 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||| ||||| | | || || || | |||||||||| | Sbjct: 144223 tgatctaaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccg 144164 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||| Sbjct: 144163 atgttgaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcggagc 144104 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggt 309 ||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || ||||||| Sbjct: 144103 tagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggggt 144044 Query: 310 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 144043 aaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatac 143984 Query: 370 ta 371 || Sbjct: 143983 ta 143982 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 478 atgaccgctcagtg 491 ||| ||||| |||| Sbjct: 192890 atggccgctaagtg 192903 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 478 atgaccgctcagtg 491 ||| ||||| |||| Sbjct: 143892 atggccgctaagtg 143879
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 6e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 67 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 126 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 127 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 186 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 187 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 246 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 247 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 300 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 301 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 360 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 361 tctgaatact 370 | ||||||| Sbjct: 924 taagaatact 933 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 402 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 461 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 462 cagctaaggcccctaaatgaccgctcagtgata 494 ||||||||||||| |||| ||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgata 1040 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 575 tgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcga 353 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 356049 tgaagaatgagccggcgacttataggcactggc 356081 Score = 44.1 bits (22), Expect = 0.43 Identities = 52/62 (83%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 478 at 479 || Sbjct: 356490 at 356491
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 264 bits (133), Expect = 2e-67 Identities = 133/133 (100%) Strand = Plus / Plus Query: 362 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 422 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 482 ccgctcagtgata 494 ||||||||||||| Sbjct: 121 ccgctcagtgata 133
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 478 at 479 || Sbjct: 2137769 at 2137768 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 478 at 479 || Sbjct: 477091 at 477092 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 2138210 tgaagaatgagccggcgacttataggcactggc 2138178 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 476650 tgaagaatgagccggcgacttataggcactggc 476682
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 81 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 140 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 141 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 200 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 201 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 260 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 261 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 317 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 318 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 465 ctaaggcccctaaat 479 |||||| ||| |||| Sbjct: 626 ctaaggtccccaaat 640 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggca 40 |||||||||||||||||||| ||||||| Sbjct: 199 tgaagaatgagccggcgacttataggca 226
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 478 at 479 || Sbjct: 339020 at 339019 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 478 at 479 || Sbjct: 132080 at 132079 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 339461 tgaagaatgagccggcgacttataggcactggc 339429 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 132521 tgaagaatgagccggcgacttataggcactggc 132489
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 258 bits (130), Expect = 2e-65 Identities = 307/362 (84%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| |||||||||||||||| || || || ||| Sbjct: 613 tgaagaatgagccggcgacttatagggagtggcttggttaaggcaaa--aagcc---gga 667 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||| | Sbjct: 668 gccaaagcgaaagcaagtctgaatagggcgcttgtcactttttatggacccgaacctgag 727 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||| ||||| | | || || || | |||||||||| | Sbjct: 728 tgatctaaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaaccgaccg 787 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| |||||| Sbjct: 788 atgttgaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactcagagc 847 Query: 253 tagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atctaggggt 309 ||||||| ||||| ||||||| ||||||||||||| ||||| ||| | | ||||||| Sbjct: 848 tagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctagttaggggt 907 Query: 310 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 908 aaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaatac 967 Query: 370 ta 371 || Sbjct: 968 ta 969 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 478 atgaccgctcagtg 491 ||| ||||| |||| Sbjct: 1059 atggccgctaagtg 1072
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 433 tgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 433 tgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 433 tgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 433 tgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 433 tgaagaatgagccggcgacttataggcactggc 465
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 72 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 129 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 250 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 306 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 307 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 365 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 366 atactagatatg 377 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 9e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 466 taaggcccctaaatg 480 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaaggg 56 |||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 601 tgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 258 bits (130), Expect = 2e-65 Identities = 160/170 (94%), Gaps = 5/170 (2%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 165 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccgga 111 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110 gccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctggg 51 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 182 |||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 50 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 1
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 9e-64 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 122 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 123 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 182 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 183 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 242 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 243 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 299 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 300 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 358 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 359 actctgaatactagata 375 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 440 agagggaaacagcccggatcaccagctaaggcccctaaatg 480 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 765 tgaagaatgagccggcgacttataggaagtggcaaggttaagg 807
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 9e-64 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 106 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 165 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 166 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 225 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 226 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 285 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 286 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 344 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 345 ccaaatcgaggcaaactctgaatacta 371 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 466 taaggcccctaaat 479 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 258 ggttctccccgaaatgcgttgaggcgcagc 287 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 365 aatac 369 ||||| Sbjct: 548 aatac 552 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 466 taaggcccctaaatgaccgctcagtga 492 ||||| ||| |||| ||| || ||||| Sbjct: 628 taaggtccccaaataaccactaagtga 654
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 258 ggttctccccgaaatgcgttgaggcgcagc 287 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 365 aatac 369 ||||| Sbjct: 548 aatac 552 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 465 ctaaggcccctaaatgaccgctcagtgata 494 |||||| ||| ||||||| ||| ||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgata 656 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 ||||| |||||||||||| | |||||||||||| Sbjct: 199 tgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 126 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 127 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 186 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 187 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 246 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 247 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 304 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 305 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 363 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 364 gaatactagatatg 377 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 466 taaggcccctaaatg 480 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggct 46 |||||||||||||||||||| ||||| ||||||| Sbjct: 596 tgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcatagg 38 |||||||||||||||||||| ||||| Sbjct: 420 tgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcatagg 38 |||||||||||||||||||| ||||| Sbjct: 420 tgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcatagg 38 |||||||||||||||||||| ||||| Sbjct: 420 tgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 176 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 235 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 236 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 295 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 296 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 352 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 353 aggcaaactctgaatactag 372 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 464 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 465 ctaaggcccctaaatga 481 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 576 tgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 105 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 160 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 126 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 127 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 186 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 187 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 246 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 247 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 304 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 305 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 363 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 364 gaatactagatatg 377 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 466 taaggcccctaaatg 480 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggct 46 |||||||||||||||||||| ||||| ||||||| Sbjct: 596 tgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 1e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 67 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 126 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 127 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 186 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 187 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 246 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 247 cagagctagctggttctccccgaaatgcgttgaggcgcagc 287 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 465 ctaaggcccctaaatgaccgctcagtg 491 |||||||||| ||||||||||| |||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtg 1030 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 300 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 359 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 360 ctctgaatactagata 375 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 573 tgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 248 bits (125), Expect = 1e-62 Identities = 237/271 (87%), Gaps = 5/271 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| ||||| | |||| ||||||||| |||| | ||||| Sbjct: 2791 tgaagaatgagccggcgacttataggtactggca-ggttaaggg---ggaaatc-ccgga 2845 Query: 73 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 132 ||| ||||||||||||||| ||||||||||| |||| | |||| |||||||||| ||| Sbjct: 2846 gccacagcgaaagcgagtctgaatagggcgatggtcagtatttatagacccgaacccggg 2905 Query: 133 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 192 ||||||| ||||| |||||||||||||||| ||| || | | ||||||||||||||||| Sbjct: 2906 tgatctaaccatggccaggatgaagcttgggtgataccacgtggaggtccgaaccgactg 2965 Query: 193 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 252 |||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||| Sbjct: 2966 atgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagc 3025 Query: 253 tagctggttctccccgaaatgcgttgaggcg 283 |||||||||||||||||||| |||| ||||| Sbjct: 3026 tagctggttctccccgaaatacgtttaggcg 3056 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 305 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 363 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 364 gaatac 369 |||||| Sbjct: 3139 gaatac 3144 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 478 atgaccgctcagtgata 494 || | |||| ||||||| Sbjct: 3232 ataagcgctaagtgata 3248
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 6e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 124 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 125 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 184 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 185 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 244 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 245 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 301 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 302 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 360 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 361 tctgaatactagatatg 377 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 426 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 480 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 |||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 593 tgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 6e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 125 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 126 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 185 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 186 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 245 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 246 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 303 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 304 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 362 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 363 tgaatactagatat 376 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 440 agagggaaacagcccggatcaccagctaaggcccctaaatga 481 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagg 55 ||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 667 tgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 2e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 258 ggttctccccgaaatgcgttgaggcgcagcagttg 292 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 465 ctaaggcccctaaatgaccgctcagtgat 493 |||||| ||| ||||| ||||||||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgat 657 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 365 aatac 369 ||||| Sbjct: 550 aatac 554
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 2e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 127 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 128 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 187 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 188 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 247 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 248 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 305 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 306 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 365 aatac 369 ||||| Sbjct: 547 aatac 551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 465 ctaaggcccctaaat 479 |||||| ||| |||| Sbjct: 626 ctaaggtccccaaat 640 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggca 40 |||||||||||||||||||| ||||||| Sbjct: 199 tgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 2e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 68 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 127 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 128 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 187 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 188 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 247 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 248 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 305 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 306 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 365 aatactagat 374 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 440 agagggaaacagcccggatcaccagctaaggcccctaaatg 480 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||| |||||| Sbjct: 761 tgaagaatgagccggcgacttataggaagtggc 793
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 244 bits (123), Expect = 2e-61 Identities = 305/361 (84%), Gaps = 6/361 (1%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||| |||||| |||||||| | ||| |||||| Sbjct: 39850 tgaagaatgagccggcgacttgtaggtagtggc-aggttaaggta---gaaaataccgga 39795 Query: 73 gccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgg 131 ||| || ||||||||| ||||||| ||| ||||||||| ||| |||||||||| || Sbjct: 39794 gccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaacccgg 39735 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 ||||||| ||||| |||| |||||||| | | | |||||| ||||| |||||||||| Sbjct: 39734 atgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaaccgact 39675 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||||| |||||||||||||| |||||||||||||||||||||| ||||| || ||| Sbjct: 39674 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatccggag 39615 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 310 |||||||||||||||||||||||||| ||||||||| |||| || | |||||||| Sbjct: 39614 ctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttaggggta 39555 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 39554 aagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctgaatact 39495 Query: 371 a 371 | Sbjct: 39494 a 39494 Score = 244 bits (123), Expect = 2e-61 Identities = 305/361 (84%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 72 |||||||||||||||||||| |||| |||||| |||||||| | ||| |||||| Sbjct: 19550 tgaagaatgagccggcgacttgtaggtagtggc-aggttaaggta---gaaaataccgga 19605 Query: 73 gccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgg 131 ||| || ||||||||| ||||||| ||| ||||||||| ||| |||||||||| || Sbjct: 19606 gccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaacccgg 19665 Query: 132 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 191 ||||||| ||||| |||| |||||||| | | | |||||| ||||| |||||||||| Sbjct: 19666 atgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaaccgact 19725 Query: 192 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 251 ||||||||| |||||||||||||| |||||||||||||||||||||| ||||| || ||| Sbjct: 19726 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatccggag 19785 Query: 252 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 310 |||||||||||||||||||||||||| ||||||||| |||| || | |||||||| Sbjct: 19786 ctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttaggggta 19845 Query: 311 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 370 |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 19846 aagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctgaatact 19905 Query: 371 a 371 | Sbjct: 19906 a 19906 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 478 at 479 || Sbjct: 39408 at 39407 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 478 at 479 || Sbjct: 19992 at 19993
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 478 atgaccgctcagtgata 494 || | |||| ||||||| Sbjct: 320614 attaacgctaagtgata 320630 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcga 353 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 320173 tgaagaatgagccggcgacttataggcactggc 320205
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Minus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 478 at 479 || Sbjct: 1775466 at 1775465 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 478 at 479 || Sbjct: 376603 at 376604 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 1775907 tgaagaatgagccggcgacttataggcactggc 1775875 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 376162 tgaagaatgagccggcgacttataggcactggc 376194
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 478 atgaccgctcagtgata 494 || | |||| ||||||| Sbjct: 3037 attaacgctaagtgata 3053 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcga 353 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 2596 tgaagaatgagccggcgacttataggcactggc 2628
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 478 atgaccgctcagtgata 494 || | |||| ||||||| Sbjct: 3038 attaacgctaagtgata 3054 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcga 353 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 2597 tgaagaatgagccggcgacttataggcactggc 2629
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 478 at 479 || Sbjct: 3265 at 3266 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 2824 tgaagaatgagccggcgacttataggcactggc 2856
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 9e-61 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 258 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 314 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 315 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 466 taaggcccctaaatga 481 ||||| ||| |||||| Sbjct: 626 taaggtccccaaatga 641 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgact 32 |||||||||||||||||||| Sbjct: 199 tgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 478 atgaccgctcagtgata 494 || | |||| ||||||| Sbjct: 19843 attaacgctaagtgata 19827 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcga 353 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 20284 tgaagaatgagccggcgacttataggcactggc 20252
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 478 atgaccgctcagtgata 494 || | |||| ||||||| Sbjct: 1597 attaacgctaagtgata 1581 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcga 353 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 2038 tgaagaatgagccggcgacttataggcactggc 2006
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 478 atgaccgctcagtgata 494 || | |||| ||||||| Sbjct: 316103 attaacgctaagtgata 316119 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcga 353 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 315662 tgaagaatgagccggcgacttataggcactggc 315694
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 365 aatac 369 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 365 aatac 369 ||||| Sbjct: 1049320 aatac 1049316 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 465 ctaagg 470 |||||| Sbjct: 1659503 ctaagg 1659508 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 465 ctaagg 470 |||||| Sbjct: 1049241 ctaagg 1049236 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 1659076 tgaagaatgagccggcgacttataggcactggc 1659108 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 1049668 tgaagaatgagccggcgacttataggcactggc 1049636
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 9e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 434 tgaagaatgagccggcgacttataggcactggc 466
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 365 aatac 369 ||||| Sbjct: 1186 aatac 1190 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 465 ctaagg 470 |||||| Sbjct: 1265 ctaagg 1270 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 838 tgaagaatgagccggcgacttataggcactggc 870
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 9e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 258 ggttctccccgaaatgcgttgaggcg 283 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 365 aatac 369 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 305 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 364 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 365 aatac 369 ||||| Sbjct: 571559 aatac 571563 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 465 ctaagg 470 |||||| Sbjct: 2657283 ctaagg 2657278 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 465 ctaagg 470 |||||| Sbjct: 571638 ctaagg 571643 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 2657710 tgaagaatgagccggcgacttataggcactggc 2657678 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 571211 tgaagaatgagccggcgacttataggcactggc 571243
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 240 bits (121), Expect = 4e-60 Identities = 196/221 (88%) Strand = Plus / Plus Query: 67 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 126 ||||||||| ||| ||||||||| || ||||||||| ||||||||| |||| |||||||| Sbjct: 2370 accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggttatagacccgaa 2429 Query: 127 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 186 || || ||||||| ||||| ||||| |||||||| | | | |||||| |||| |||||| Sbjct: 2430 cccggatgatctaaccatggccaggttgaagcttaggtaatactaagtggaggaccgaac 2489 Query: 187 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 246 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2490 cgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaatt 2549 Query: 247 cagagctagctggttctccccgaaatgcgttgaggcgcagc 287 | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2550 cggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 407 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 466 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 467 aaggcccctaaat 479 ||||||||||||| Sbjct: 2751 aaggcccctaaat 2763
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 120 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 179 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 180 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 239 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 240 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 299 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 300 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 358 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 359 actctgaatacta 371 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 418 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 477 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 478 at 479 || Sbjct: 1470 at 1471 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||| |||||| Sbjct: 1027 tgaagaatgagccggcgacttataggtagtggc 1059
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 119 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 178 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 179 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 238 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 239 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 298 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 299 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 356 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 357 aaactctgaatactagatatg 377 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 404 ggccagtgagacgatgggggataagcttcat 434 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 238 bits (120), Expect = 1e-59 Identities = 256/302 (84%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| ||| ||||||||| | ||||| ||||| |||||| ||| |||||||||| Sbjct: 2324 ggagccatagtgaaagcgagcttgaatagagcgatagtcactatttacagacccgaaccc 2383 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 || ||||||| ||||| |||||||||| ||| | | | |||||| |||||||||||||| Sbjct: 2384 ggatgatctagccatggccaggatgaaacttaggtaacactaagtggaggtccgaaccga 2443 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| ||||| | | Sbjct: 2444 ctgatgttgaaaaatcaacggatgagctgtggctagcggtgaaataccaatcgaattcgg 2503 Query: 250 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 309 |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||| Sbjct: 2504 agctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggt 2563 Query: 310 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 |||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||| Sbjct: 2564 aaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatac 2623 Query: 370 ta 371 || Sbjct: 2624 ta 2625 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 407 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 466 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 467 aaggcccctaaat 479 ||||||||||||| Sbjct: 2700 aaggcccctaaat 2712 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgact 32 |||||||||||||||||||| Sbjct: 2271 tgaagaatgagccggcgact 2290
>gb|DQ312633.1| Uncultured bacterium clone 3C6G 23S ribosomal RNA gene, partial sequence Length = 807 Score = 234 bits (118), Expect = 2e-58 Identities = 190/214 (88%) Strand = Plus / Plus Query: 70 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 129 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 130 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 189 |||||||||| ||||| |||||||||||||||| || || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggcgataccaagtggaggtccgaaccga 605 Query: 190 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 249 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 250 agctagctggttctccccgaaatgcgttgaggcg 283 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 319 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 369 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 737 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 787 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| ||||||| |||| Sbjct: 434 tgaagaatgagccggcgacttataggcactggc 466
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 234 bits (118), Expect = 2e-58 Identities = 256/300 (85%), Gaps = 4/300 (1%) Strand = Plus / Plus Query: 78 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 137 ||||||||||||||| | |||||| ||||| || ||| |||||||||| |||||||| Sbjct: 642 agcgaaagcgagtctgataagggcgtctgtcattggctatagacccgaacccgggtgatc 701 Query: 138 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 197 || || | ||||||||| ||||| | | |||||| ||||||||||||||| |||||| Sbjct: 702 taaccgcggtcaggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgtt 761 Query: 198 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 257 ||| |||| |||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 762 gaaaaatcggcggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagct 821 Query: 258 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggaca-tctaggggtaaag 313 |||||||||||||||||||||||||||||| ||| || | | | |||||||||| || Sbjct: 822 ggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagag 881 Query: 314 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 373 |||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 882 cactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactaga 941 Score = 89.7 bits (45), Expect = 8e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 405 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 464 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 465 ctaaggcccctaaatga 481 ||||||||||||||||| Sbjct: 1014 ctaaggcccctaaatga 1030 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggc 45 |||||||||||||||||||| || | ||||||| Sbjct: 582 tgaagaatgagccggcgacttatggtcagtggc 614
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 234 bits (118), Expect = 2e-58 Identities = 244/279 (87%), Gaps = 9/279 (3%) Strand = Plus / Plus Query: 105 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 164 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 165 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 224 |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| |||||||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtta 905 Query: 225 ggggtgaaatgccactcgaacccagagctagctggttctccccg-aaatgcgttgaggcg 283 |||||||||||||| |||||| | ||||||||| |||||||||| ||||||||||| ||| Sbjct: 906 ggggtgaaatgccaatcgaactc-gagctagct-gttctccccgtaaatgcgttga-gcg 962 Query: 284 cagcagt---tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 338 |||| || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 963 cagcggttgatgacttgggctatctaggggtaaagcactgtttcggtgcgggctgcgaga 1022 Query: 339 gcggtaccaaatcgaggcaaactctgaatactagatatg 377 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 1023 gcggtaccaaatcgtagcaaactaagaatactaggtatg 1061 Score = 123 bits (62), Expect = 6e-25 Identities = 81/86 (94%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 406 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 465 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 466 taaggcccctaaatgaccgctcagtg 491 ||||||||||||||| ||||| |||| Sbjct: 1132 taaggcccctaaatggccgctaagtg 1157 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 13 tgaagaatgagccggcgactcataggcagtggcttggttaa 53 |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 696 tgaagaatgagccggcgacttatagggagtggcgtggttaa 736 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,752,598 Number of Sequences: 3902068 Number of extensions: 2752598 Number of successful extensions: 53467 Number of sequences better than 10.0: 2686 Number of HSP's better than 10.0 without gapping: 2703 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 39648 Number of HSP's gapped (non-prelim): 13311 length of query: 494 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 472 effective length of database: 17,147,199,772 effective search space: 8093478292384 effective search space used: 8093478292384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
