>PKSM_BACSU (P40872) Putative polyketide synthase pksM|
          Length = 4262

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 37   SPVPFAASRESGPWRRCGSRPLRLKEQVARQGVFKQFGAGGNSDNAFTDE 186
            S  PF   ++ G W+R    P+   ++V R+     FGAGG++ +   +E
Sbjct: 2689 SHTPFVVQQQLGEWKR----PVIGGQEVPRRAGLSSFGAGGSNAHIILEE 2734

>DFR12_MOUSE (P50716) Defensin-related cryptdin, related sequence 12 precursor|
           (Cryptdin-related protein 4C-5) (CRS4C)
          Length = 91

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 188 DSSVNALSEFPPAPNCLNTPWRATC 114
           D+++      PP P+CL+ PW   C
Sbjct: 56  DAAIRRARRCPPCPSCLSCPWCPRC 80

>PUR4_SALTI (Q8Z4L6) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1295

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = -3

Query: 150 PKLLKHTLAGDLLLEPERPASTAPPW 73
           P L  HTLAG LLL   RP  T  PW
Sbjct: 63  PALSSHTLAGKLLLVTPRP-GTISPW 87

>SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 926

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 43  VPFAASRESGPWRRCGSRPLRLKEQVARQGVFKQFG 150
           +P +  R  G W+       RLKE++AR  V++  G
Sbjct: 776 LPVSVDRFFGEWKDLKKENERLKEELARSRVYRMLG 811

>TRPI_PSESY (P34818) HTH-type transcriptional regulator trpI (TrpBA operon|
           transcriptional activator)
          Length = 298

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
 Frame = -3

Query: 150 PKLLKHTLAGDLLLEPERPASTA------PPWP 70
           P L  H  AGD  L+P RP   A      PPWP
Sbjct: 121 PDLRLHLSAGDGDLDPRRPGLDALLVFAEPPWP 153

>RSE1_ASHGO (Q753D4) Pre-mRNA-splicing factor RSE1|
          Length = 1288

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 77  GGAVEAGLSGSRSRSPARVCLSSLGLVEI 163
           GG+VE G  GS+ R   ++C+++   VE+
Sbjct: 40  GGSVEGGKKGSKWRKQLQICMATQTQVEL 68

>RAB26_MOUSE (Q504M8) Ras-related protein Rab-26|
          Length = 260

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 4  PKVKGGETKASSPVPFAASRESGP 75
          PK KGG   A+S +P AA+  +GP
Sbjct: 7  PKSKGGSEPATSTLPAAAAATNGP 30


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,562,974
Number of Sequences: 219361
Number of extensions: 615070
Number of successful extensions: 1800
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)