Clone Name | basd3p02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_478504.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2093 Score = 595 bits (300), Expect = e-167 Identities = 498/560 (88%), Gaps = 3/560 (0%) Strand = Plus / Plus Query: 1 gggacgccatcgcgagcctcaacgccaccgacctggacaagcaacgtaagctccaggagt 60 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1042 gggacgccatcgcgagcctcaacgccaccgacgccgacaagcagcgcaagctccaggagt 1101 Query: 61 ggagcaacgccaccagctacgacaagtgcgtgtcccacgagcaagcgcgcgacatcgccg 120 ||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||| Sbjct: 1102 ggagcgccgccaccagccacgacaagtgcgtgcccctcgagcaggcgcgcgacatcgccg 1161 Query: 121 cgatcctgggggtcgggtccgtgttctgggactgggatctgccacgaaccagggaagggt 180 || ||| || ||| ||| |||||||||||||||| ||||| |||| |||| |||| Sbjct: 1162 cgggcctcggcgtcacatccctgttctgggactgggacctgccgagaacacgggaggggt 1221 Query: 181 tctaccgcttccagggctccgtggcgtcggcagtggtccgcgggcgcgccttcgcgccgc 240 |||||||||||| |||||||| ||| |||| || |||||||| ||||| |||||||||| Sbjct: 1222 tctaccgcttccgcggctccgtcgcggcggccgtcgtccgcggccgcgcgttcgcgccgc 1281 Query: 241 acgccgacgtgctctggatggagacgtcgagcccaaacatcgccgagtgcacggccttcg 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1282 acgccgacgtgctctggatggagacgtcgagccccaacatcgccgagtgcacggcgttcg 1341 Query: 301 ccgagggcgtgagggcggctttcccggaggcgatgctggcctacaacctctcgccgtcct 360 ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 1342 ccgagggcgtgagggcggcgagcccgggcgcgatgctggcgtacaacctctcgccgtcct 1401 Query: 361 tcaactgggacgcgtcaggcatgacggacgccgacatggcggcgttcatcccgcatgtcg 420 ||||||||||||| || ||||||||||||||||||||| ||| ||||||||||| || | Sbjct: 1402 tcaactgggacgcctccggcatgacggacgccgacatgtcggagttcatcccgcgcgtgg 1461 Query: 421 ccaagctcggctacgtatggcagttcatcacgctggcccgggttccacgccgacgcgctc 480 | | ||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1462 cgaggctggggtacgtgtggcagttcatcacgctcg-ccgggttccacgccgacgcgctc 1520 Query: 481 gtcaccggacacgttcgcgcgggacttcgcccggcgcggcatgctggccctacgtggaga 540 |||| ||||||||||||| || |||||||| |||||||||||||||| | |||||||||| Sbjct: 1521 gtca-cggacacgttcgcccgcgacttcgcgcggcgcggcatgctgg-cgtacgtggaga 1578 Query: 541 ggatccagcgggaggagagg 560 |||||||| ||||||||||| Sbjct: 1579 ggatccagagggaggagagg 1598
>ref|XM_506381.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007H12.40 mRNA Length = 2154 Score = 595 bits (300), Expect = e-167 Identities = 498/560 (88%), Gaps = 3/560 (0%) Strand = Plus / Plus Query: 1 gggacgccatcgcgagcctcaacgccaccgacctggacaagcaacgtaagctccaggagt 60 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1021 gggacgccatcgcgagcctcaacgccaccgacgccgacaagcagcgcaagctccaggagt 1080 Query: 61 ggagcaacgccaccagctacgacaagtgcgtgtcccacgagcaagcgcgcgacatcgccg 120 ||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||| Sbjct: 1081 ggagcgccgccaccagccacgacaagtgcgtgcccctcgagcaggcgcgcgacatcgccg 1140 Query: 121 cgatcctgggggtcgggtccgtgttctgggactgggatctgccacgaaccagggaagggt 180 || ||| || ||| ||| |||||||||||||||| ||||| |||| |||| |||| Sbjct: 1141 cgggcctcggcgtcacatccctgttctgggactgggacctgccgagaacacgggaggggt 1200 Query: 181 tctaccgcttccagggctccgtggcgtcggcagtggtccgcgggcgcgccttcgcgccgc 240 |||||||||||| |||||||| ||| |||| || |||||||| ||||| |||||||||| Sbjct: 1201 tctaccgcttccgcggctccgtcgcggcggccgtcgtccgcggccgcgcgttcgcgccgc 1260 Query: 241 acgccgacgtgctctggatggagacgtcgagcccaaacatcgccgagtgcacggccttcg 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1261 acgccgacgtgctctggatggagacgtcgagccccaacatcgccgagtgcacggcgttcg 1320 Query: 301 ccgagggcgtgagggcggctttcccggaggcgatgctggcctacaacctctcgccgtcct 360 ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 1321 ccgagggcgtgagggcggcgagcccgggcgcgatgctggcgtacaacctctcgccgtcct 1380 Query: 361 tcaactgggacgcgtcaggcatgacggacgccgacatggcggcgttcatcccgcatgtcg 420 ||||||||||||| || ||||||||||||||||||||| ||| ||||||||||| || | Sbjct: 1381 tcaactgggacgcctccggcatgacggacgccgacatgtcggagttcatcccgcgcgtgg 1440 Query: 421 ccaagctcggctacgtatggcagttcatcacgctggcccgggttccacgccgacgcgctc 480 | | ||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1441 cgaggctggggtacgtgtggcagttcatcacgctcg-ccgggttccacgccgacgcgctc 1499 Query: 481 gtcaccggacacgttcgcgcgggacttcgcccggcgcggcatgctggccctacgtggaga 540 |||| ||||||||||||| || |||||||| |||||||||||||||| | |||||||||| Sbjct: 1500 gtca-cggacacgttcgcccgcgacttcgcgcggcgcggcatgctgg-cgtacgtggaga 1557 Query: 541 ggatccagcgggaggagagg 560 |||||||| ||||||||||| Sbjct: 1558 ggatccagagggaggagagg 1577
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 595 bits (300), Expect = e-167 Identities = 498/560 (88%), Gaps = 3/560 (0%) Strand = Plus / Minus Query: 1 gggacgccatcgcgagcctcaacgccaccgacctggacaagcaacgtaagctccaggagt 60 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 20638822 gggacgccatcgcgagcctcaacgccaccgacgccgacaagcagcgcaagctccaggagt 20638763 Query: 61 ggagcaacgccaccagctacgacaagtgcgtgtcccacgagcaagcgcgcgacatcgccg 120 ||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||| Sbjct: 20638762 ggagcgccgccaccagccacgacaagtgcgtgcccctcgagcaggcgcgcgacatcgccg 20638703 Query: 121 cgatcctgggggtcgggtccgtgttctgggactgggatctgccacgaaccagggaagggt 180 || ||| || ||| ||| |||||||||||||||| ||||| |||| |||| |||| Sbjct: 20638702 cgggcctcggcgtcacatccctgttctgggactgggacctgccgagaacacgggaggggt 20638643 Query: 181 tctaccgcttccagggctccgtggcgtcggcagtggtccgcgggcgcgccttcgcgccgc 240 |||||||||||| |||||||| ||| |||| || |||||||| ||||| |||||||||| Sbjct: 20638642 tctaccgcttccgcggctccgtcgcggcggccgtcgtccgcggccgcgcgttcgcgccgc 20638583 Query: 241 acgccgacgtgctctggatggagacgtcgagcccaaacatcgccgagtgcacggccttcg 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 20638582 acgccgacgtgctctggatggagacgtcgagccccaacatcgccgagtgcacggcgttcg 20638523 Query: 301 ccgagggcgtgagggcggctttcccggaggcgatgctggcctacaacctctcgccgtcct 360 ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 20638522 ccgagggcgtgagggcggcgagcccgggcgcgatgctggcgtacaacctctcgccgtcct 20638463 Query: 361 tcaactgggacgcgtcaggcatgacggacgccgacatggcggcgttcatcccgcatgtcg 420 ||||||||||||| || ||||||||||||||||||||| ||| ||||||||||| || | Sbjct: 20638462 tcaactgggacgcctccggcatgacggacgccgacatgtcggagttcatcccgcgcgtgg 20638403 Query: 421 ccaagctcggctacgtatggcagttcatcacgctggcccgggttccacgccgacgcgctc 480 | | ||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 20638402 cgaggctggggtacgtgtggcagttcatcacgctcg-ccgggttccacgccgacgcgctc 20638344 Query: 481 gtcaccggacacgttcgcgcgggacttcgcccggcgcggcatgctggccctacgtggaga 540 |||| ||||||||||||| || |||||||| |||||||||||||||| | |||||||||| Sbjct: 20638343 gtca-cggacacgttcgcccgcgacttcgcgcggcgcggcatgctgg-cgtacgtggaga 20638286 Query: 541 ggatccagcgggaggagagg 560 |||||||| ||||||||||| Sbjct: 20638285 ggatccagagggaggagagg 20638266
>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0007H12 Length = 150881 Score = 595 bits (300), Expect = e-167 Identities = 498/560 (88%), Gaps = 3/560 (0%) Strand = Plus / Minus Query: 1 gggacgccatcgcgagcctcaacgccaccgacctggacaagcaacgtaagctccaggagt 60 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 129901 gggacgccatcgcgagcctcaacgccaccgacgccgacaagcagcgcaagctccaggagt 129842 Query: 61 ggagcaacgccaccagctacgacaagtgcgtgtcccacgagcaagcgcgcgacatcgccg 120 ||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||| Sbjct: 129841 ggagcgccgccaccagccacgacaagtgcgtgcccctcgagcaggcgcgcgacatcgccg 129782 Query: 121 cgatcctgggggtcgggtccgtgttctgggactgggatctgccacgaaccagggaagggt 180 || ||| || ||| ||| |||||||||||||||| ||||| |||| |||| |||| Sbjct: 129781 cgggcctcggcgtcacatccctgttctgggactgggacctgccgagaacacgggaggggt 129722 Query: 181 tctaccgcttccagggctccgtggcgtcggcagtggtccgcgggcgcgccttcgcgccgc 240 |||||||||||| |||||||| ||| |||| || |||||||| ||||| |||||||||| Sbjct: 129721 tctaccgcttccgcggctccgtcgcggcggccgtcgtccgcggccgcgcgttcgcgccgc 129662 Query: 241 acgccgacgtgctctggatggagacgtcgagcccaaacatcgccgagtgcacggccttcg 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 129661 acgccgacgtgctctggatggagacgtcgagccccaacatcgccgagtgcacggcgttcg 129602 Query: 301 ccgagggcgtgagggcggctttcccggaggcgatgctggcctacaacctctcgccgtcct 360 ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 129601 ccgagggcgtgagggcggcgagcccgggcgcgatgctggcgtacaacctctcgccgtcct 129542 Query: 361 tcaactgggacgcgtcaggcatgacggacgccgacatggcggcgttcatcccgcatgtcg 420 ||||||||||||| || ||||||||||||||||||||| ||| ||||||||||| || | Sbjct: 129541 tcaactgggacgcctccggcatgacggacgccgacatgtcggagttcatcccgcgcgtgg 129482 Query: 421 ccaagctcggctacgtatggcagttcatcacgctggcccgggttccacgccgacgcgctc 480 | | ||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 129481 cgaggctggggtacgtgtggcagttcatcacgctcg-ccgggttccacgccgacgcgctc 129423 Query: 481 gtcaccggacacgttcgcgcgggacttcgcccggcgcggcatgctggccctacgtggaga 540 |||| ||||||||||||| || |||||||| |||||||||||||||| | |||||||||| Sbjct: 129422 gtca-cggacacgttcgcccgcgacttcgcgcggcgcggcatgctgg-cgtacgtggaga 129365 Query: 541 ggatccagcgggaggagagg 560 |||||||| ||||||||||| Sbjct: 129364 ggatccagagggaggagagg 129345
>dbj|AK103744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138N10, full insert sequence Length = 2092 Score = 595 bits (300), Expect = e-167 Identities = 498/560 (88%), Gaps = 3/560 (0%) Strand = Plus / Plus Query: 1 gggacgccatcgcgagcctcaacgccaccgacctggacaagcaacgtaagctccaggagt 60 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1041 gggacgccatcgcgagcctcaacgccaccgacgccgacaagcagcgcaagctccaggagt 1100 Query: 61 ggagcaacgccaccagctacgacaagtgcgtgtcccacgagcaagcgcgcgacatcgccg 120 ||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||| Sbjct: 1101 ggagcgccgccaccagccacgacaagtgcgtgcccctcgagcaggcgcgcgacatcgccg 1160 Query: 121 cgatcctgggggtcgggtccgtgttctgggactgggatctgccacgaaccagggaagggt 180 || ||| || ||| ||| |||||||||||||||| ||||| |||| |||| |||| Sbjct: 1161 cgggcctcggcgtcacatccctgttctgggactgggacctgccgagaacacgggaggggt 1220 Query: 181 tctaccgcttccagggctccgtggcgtcggcagtggtccgcgggcgcgccttcgcgccgc 240 |||||||||||| |||||||| ||| |||| || |||||||| ||||| |||||||||| Sbjct: 1221 tctaccgcttccgcggctccgtcgcggcggccgtcgtccgcggccgcgcgttcgcgccgc 1280 Query: 241 acgccgacgtgctctggatggagacgtcgagcccaaacatcgccgagtgcacggccttcg 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1281 acgccgacgtgctctggatggagacgtcgagccccaacatcgccgagtgcacggcgttcg 1340 Query: 301 ccgagggcgtgagggcggctttcccggaggcgatgctggcctacaacctctcgccgtcct 360 ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 1341 ccgagggcgtgagggcggcgagcccgggcgcgatgctggcgtacaacctctcgccgtcct 1400 Query: 361 tcaactgggacgcgtcaggcatgacggacgccgacatggcggcgttcatcccgcatgtcg 420 ||||||||||||| || ||||||||||||||||||||| ||| ||||||||||| || | Sbjct: 1401 tcaactgggacgcctccggcatgacggacgccgacatgtcggagttcatcccgcgcgtgg 1460 Query: 421 ccaagctcggctacgtatggcagttcatcacgctggcccgggttccacgccgacgcgctc 480 | | ||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1461 cgaggctggggtacgtgtggcagttcatcacgctcg-ccgggttccacgccgacgcgctc 1519 Query: 481 gtcaccggacacgttcgcgcgggacttcgcccggcgcggcatgctggccctacgtggaga 540 |||| ||||||||||||| || |||||||| |||||||||||||||| | |||||||||| Sbjct: 1520 gtca-cggacacgttcgcccgcgacttcgcgcggcgcggcatgctgg-cgtacgtggaga 1577 Query: 541 ggatccagcgggaggagagg 560 |||||||| ||||||||||| Sbjct: 1578 ggatccagagggaggagagg 1597
>dbj|AK063353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C03, full insert sequence Length = 2154 Score = 595 bits (300), Expect = e-167 Identities = 498/560 (88%), Gaps = 3/560 (0%) Strand = Plus / Plus Query: 1 gggacgccatcgcgagcctcaacgccaccgacctggacaagcaacgtaagctccaggagt 60 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1021 gggacgccatcgcgagcctcaacgccaccgacgccgacaagcagcgcaagctccaggagt 1080 Query: 61 ggagcaacgccaccagctacgacaagtgcgtgtcccacgagcaagcgcgcgacatcgccg 120 ||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||| Sbjct: 1081 ggagcgccgccaccagccacgacaagtgcgtgcccctcgagcaggcgcgcgacatcgccg 1140 Query: 121 cgatcctgggggtcgggtccgtgttctgggactgggatctgccacgaaccagggaagggt 180 || ||| || ||| ||| |||||||||||||||| ||||| |||| |||| |||| Sbjct: 1141 cgggcctcggcgtcacatccctgttctgggactgggacctgccgagaacacgggaggggt 1200 Query: 181 tctaccgcttccagggctccgtggcgtcggcagtggtccgcgggcgcgccttcgcgccgc 240 |||||||||||| |||||||| ||| |||| || |||||||| ||||| |||||||||| Sbjct: 1201 tctaccgcttccgcggctccgtcgcggcggccgtcgtccgcggccgcgcgttcgcgccgc 1260 Query: 241 acgccgacgtgctctggatggagacgtcgagcccaaacatcgccgagtgcacggccttcg 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1261 acgccgacgtgctctggatggagacgtcgagccccaacatcgccgagtgcacggcgttcg 1320 Query: 301 ccgagggcgtgagggcggctttcccggaggcgatgctggcctacaacctctcgccgtcct 360 ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 1321 ccgagggcgtgagggcggcgagcccgggcgcgatgctggcgtacaacctctcgccgtcct 1380 Query: 361 tcaactgggacgcgtcaggcatgacggacgccgacatggcggcgttcatcccgcatgtcg 420 ||||||||||||| || ||||||||||||||||||||| ||| ||||||||||| || | Sbjct: 1381 tcaactgggacgcctccggcatgacggacgccgacatgtcggagttcatcccgcgcgtgg 1440 Query: 421 ccaagctcggctacgtatggcagttcatcacgctggcccgggttccacgccgacgcgctc 480 | | ||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1441 cgaggctggggtacgtgtggcagttcatcacgctcg-ccgggttccacgccgacgcgctc 1499 Query: 481 gtcaccggacacgttcgcgcgggacttcgcccggcgcggcatgctggccctacgtggaga 540 |||| ||||||||||||| || |||||||| |||||||||||||||| | |||||||||| Sbjct: 1500 gtca-cggacacgttcgcccgcgacttcgcgcggcgcggcatgctgg-cgtacgtggaga 1557 Query: 541 ggatccagcgggaggagagg 560 |||||||| ||||||||||| Sbjct: 1558 ggatccagagggaggagagg 1577
>gb|U69129.1|ZMU69129 Zea mays isocitrate lyase (ICL) mRNA, partial cds Length = 492 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 76 gctacgacaagtgcgtgtcccacgagcaagcgcgcgacatcgccgcgatcctgggggtcg 135 ||||||||| |||||||||| |||| || ||||||||||||||||| | ||| || ||| Sbjct: 410 gctacgacaggtgcgtgtccaacgaccaggcgcgcgacatcgccgccagcctcggcgtca 469 Query: 136 ggtccgtgttctgggactggga 157 ||||||||||||||||||||| Sbjct: 470 cgtccgtgttctgggactggga 491
>ref|NM_113067.2| Arabidopsis thaliana catalytic/ isocitrate lyase AT3G21720 mRNA, complete cds Length = 2086 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 324 ccggaggcgatgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatg 383 ||||||| ||||| |||||||| |||||||||||||||||||||||||| || || ||| Sbjct: 1358 ccggaggtcatgctcgcctacaatctctcgccgtccttcaactgggacgcttccggtatg 1417 Query: 384 acgga 388 ||||| Sbjct: 1418 acgga 1422 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctccgtg 203 |||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| || Sbjct: 1178 ttctgggactgggacttgccgagaaccagagaaggattctaccggttccaaggctcggtc 1237 Query: 204 gcgtcggcagtggtccg 220 || |||| |||||||| Sbjct: 1238 gcagcggccgtggtccg 1254
>gb|BT010397.1| Arabidopsis thaliana At3g21720 mRNA, complete cds Length = 1731 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 324 ccggaggcgatgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatg 383 ||||||| ||||| |||||||| |||||||||||||||||||||||||| || || ||| Sbjct: 1288 ccggaggtcatgctcgcctacaatctctcgccgtccttcaactgggacgcttccggtatg 1347 Query: 384 acgga 388 ||||| Sbjct: 1348 acgga 1352 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctccgtg 203 |||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| || Sbjct: 1108 ttctgggactgggacttgccgagaaccagagaaggattctaccggttccaaggctcggtc 1167 Query: 204 gcgtcggcagtggtccg 220 || |||| |||||||| Sbjct: 1168 gcagcggccgtggtccg 1184
>gb|AY140000.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 2087 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 324 ccggaggcgatgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatg 383 ||||||| ||||| |||||||| |||||||||||||||||||||||||| || || ||| Sbjct: 1360 ccggaggtcatgctcgcctacaatctctcgccgtccttcaactgggacgcttccggtatg 1419 Query: 384 acgga 388 ||||| Sbjct: 1420 acgga 1424 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctccgtg 203 |||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| || Sbjct: 1180 ttctgggactgggacttgccgagaaccagagaaggattctaccggttccaaggctcggtc 1239 Query: 204 gcgtcggcagtggtccg 220 || |||| |||||||| Sbjct: 1240 gcagcggccgtggtccg 1256
>dbj|AB025634.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSD21 Length = 59793 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 324 ccggaggcgatgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatg 383 ||||||| ||||| |||||||| |||||||||||||||||||||||||| || || ||| Sbjct: 10453 ccggaggtcatgctcgcctacaatctctcgccgtccttcaactgggacgcttccggtatg 10394 Query: 384 acgga 388 ||||| Sbjct: 10393 acgga 10389 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctccgtg 203 |||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| || Sbjct: 10633 ttctgggactgggacttgccgagaaccagagaaggattctaccggttccaaggctcggtc 10574 Query: 204 gcgtcggcagtggtccg 220 || |||| |||||||| Sbjct: 10573 gcagcggccgtggtccg 10557
>gb|M83534.1|ATHICLA A.thaliana isocitrate lyase gene, 5' end Length = 3801 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 324 ccggaggcgatgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatg 383 ||||||| ||||| |||||||| |||||||||||||||||||||||||| || || ||| Sbjct: 3722 ccggaggtcatgctcgcctacaatctctcgccgtccttcaactgggacgcttccggtatg 3781 Query: 384 acgga 388 ||||| Sbjct: 3782 acgga 3786 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctccgtg 203 |||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| || Sbjct: 3542 ttctgggactgggacttgccgagaaccagagaaggattctaccggttccaaggctcggtc 3601 Query: 204 gcgtcggcagtggtccg 220 || |||| |||||||| Sbjct: 3602 gcagcggccgtggtccg 3618
>gb|AF193815.1|AF193815 Dendrobium crumenatum isocitrate lyase (Icl) mRNA, complete cds Length = 1974 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 174 gaagggttctaccgcttccagggctccgtggcgtcggcagtggtccgcgggcgcgccttc 233 |||||||| ||||| |||| || ||||||| | |||| ||||| ||||| || || || Sbjct: 1174 gaagggttttaccgattccgtggatccgtggaggcggcggtggtgcgcggccgggcgttt 1233 Query: 234 gcgccgcacgccgacgtgctctggatggagacgtcgagccc 274 |||||||||||||| || | |||||||||||||||||||| Sbjct: 1234 gcgccgcacgccgatctgatttggatggagacgtcgagccc 1274 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 333 atgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatgacgga 388 |||||||| |||||| | |||||||| ||||||||||| ||| | || |||||||| Sbjct: 1333 atgctggcttacaacttgtcgccgtcgttcaactgggatgcggcggggatgacgga 1388
>emb|Y13356.1|BNGLYISOL Brassica napus mRNA for glyoxysomal isocitrate lyase Length = 1731 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 333 atgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatgacgga 388 ||||| |||||||||||||| || ||||||||||||||||| || || |||||||| Sbjct: 1297 atgctcgcctacaacctctccccatccttcaactgggacgcttctggtatgacgga 1352 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctc 199 |||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 1108 ttctgggactgggacttgcccagaaccagagaaggattctaccggttccaaggctc 1163
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgggac 371 |||||| ||||||||||| ||||||||||||||||||||| Sbjct: 2506754 gatgctcgcctacaacctgtcgccgtccttcaactgggac 2506793 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 |||| ||||||||| ||||||||||||||||||| Sbjct: 3399901 tgctcgcctacaactgctcgccgtccttcaactgg 3399935
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgggac 371 |||||||||||||||||| |||||||| |||||||||||| Sbjct: 1797217 gatgctggcctacaacctgtcgccgtcgttcaactgggac 1797256 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| ||||||||| ||||||||| Sbjct: 4422157 gatgctggcctacaactgctcgccgtcgttcaactgg 4422193 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 ccgacatggcggcgttcatcccgca 415 ||||| ||||||||||||||||||| Sbjct: 4721790 ccgacgtggcggcgttcatcccgca 4721814 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cgcgcgacatcgccgcgatc 125 |||||||||||||||||||| Sbjct: 1493702 cgcgcgacatcgccgcgatc 1493721
>gb|L08482.1|BNAICL Brassica napus isocitrate lyase (ILA133) gene, complete cds Length = 4373 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 333 atgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatgacgga 388 ||||| |||||||||||||| || ||||||||||||||||| || || |||||||| Sbjct: 3262 atgctcgcctacaacctctccccatccttcaactgggacgcttctggtatgacgga 3317 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctc 199 |||||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 3073 ttctgggactgggacttgcccagaaccagagaaggattctaccggttccaaggctc 3128
>ref|XM_501923.1| Yarrowia lipolytica CLIB122, YALI0C16885g predicted mRNA Length = 1623 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 420 gccaagctcggctacgtatggcagttcatcacgctggcc 458 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 1339 gccaagctcggctacgtgtggcagttcatcactctggcc 1377
>emb|X72848.1|YLICL1A Y.lipolytica ICL1 gene for isocitrate lyase Length = 4450 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 420 gccaagctcggctacgtatggcagttcatcacgctggcc 458 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 3878 gccaagctcggctacgtgtggcagttcatcactctggcc 3916
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 420 gccaagctcggctacgtatggcagttcatcacgctggcc 458 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 2383060 gccaagctcggctacgtgtggcagttcatcactctggcc 2383098
>gb|AF243525.1|AF243525 Ipomoea batatas isocitrate lyase (ICL) mRNA, complete cds Length = 1989 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttctac 185 |||||||| ||||| |||||| |||||||||||||||||||| Sbjct: 1139 ttctgggattgggacctgccaagaaccagggaagggttctac 1180 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgggacgcgtc 376 ||||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 1327 gatgctggcttacaatctctcgccgtcgttcaactgggatgcgtc 1371
>dbj|AK107356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-H12, full insert sequence Length = 1828 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 335 gctggcctacaacctctcgccgtccttcaactgggacgc 373 |||||| |||||||| |||||||| |||||||||||||| Sbjct: 1389 gctggcgtacaacctgtcgccgtcgttcaactgggacgc 1427 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 422 caagctcggctacgtatggcagttcatcacgct 454 ||||||||||| ||| ||||||||||||||||| Sbjct: 1476 caagctcggcttcgtgtggcagttcatcacgct 1508
>emb|Z46257.1|MLACEA M.leprae aceA gene for isocitrate lyase Length = 37049 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 333 atgctggcctacaacctctcgccgtccttcaactggga 370 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 1077 atgctggcttacaatctctcgccgtcgttcaactggga 1040
>emb|AL583924.1|MLEPRTN8 Mycobacterium leprae strain TN complete genome; segment 8/10 Length = 342300 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 333 atgctggcctacaacctctcgccgtccttcaactggga 370 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 22806 atgctggcttacaatctctcgccgtcgttcaactggga 22769
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| ||||||||| ||||||||| Sbjct: 2147555 gatgctggcctacaactgctcgccgtcgttcaactgg 2147519 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 gttcatcccgcatgtcgccaagctcggc 431 |||| |||||| |||||||||||||||| Sbjct: 2785635 gttcgtcccgcctgtcgccaagctcggc 2785662
>emb|X52136.1|GHICL Cotton mRNA for cottonseed isocitrate lyase (ICL) (EC 4.1.3.1) Length = 1872 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggttcta 184 ||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 1168 ttctgggactgggatttgcctagaaccagagaagggttcta 1208
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| |||||| |||||||||||| Sbjct: 3339189 gatgctggcctacaactgctcgccttccttcaactgg 3339225
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 ||||||||| |||||| ||||||||||||||||||| Sbjct: 130744 gatgctggcgtacaactgctcgccgtccttcaactgg 130780
>emb|AJ421510.1|REU421510 Ralstonia eutropha aceA1 gene for isocitrate lyase Length = 1680 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| ||||||||| ||||||||| Sbjct: 1092 gatgctggcctacaactgctcgccgtcgttcaactgg 1128
>gb|AF251075.1|AF251075 Oryza sativa isocitrate lyase mRNA, partial cds Length = 491 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 532 acgtggagaggatccagcgggaggagagg 560 ||||||||||||||||| ||||||||||| Sbjct: 1 acgtggagaggatccagagggaggagagg 29
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||| ||||||||| ||||||||||||||||||| Sbjct: 2492902 gatgctcgcctacaactgctcgccgtccttcaactgg 2492938 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 cgccgacgcgctcgtcaccg 487 |||||||||||||||||||| Sbjct: 3599803 cgccgacgcgctcgtcaccg 3599784
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| ||||||||| ||||||||| Sbjct: 1448903 gatgctggcctacaactgctcgccgtcgttcaactgg 1448939
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgggac 371 ||||||||| ||||||||||| || || |||||||||||| Sbjct: 2159199 gatgctggcgtacaacctctcaccatcgttcaactgggac 2159238 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| |||||| || ||||||||| Sbjct: 559899 gatgctggcctacaactgctcgccatcgttcaactgg 559935
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgggac 371 ||||||||| ||||||||||| || || |||||||||||| Sbjct: 83204 gatgctggcgtacaacctctcaccatcgttcaactgggac 83243
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgggac 371 ||||||||| ||||||||||| || || |||||||||||| Sbjct: 238188 gatgctggcgtacaacctctcaccatcgttcaactgggac 238227
>dbj|AB079254.1| Fomitopsis palustris FPICL1 mRNA for isocitrate lyase, complete cds Length = 1780 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 231 ttcgcgccgcacgccgacgtgctctggatggagacg 266 ||||||||| |||| ||| ||||||||||||||||| Sbjct: 1194 ttcgcgccgtacgcggacctgctctggatggagacg 1229
>gb|AF013216.1|AF013216 Myxococcus xanthus Dog (dog), isocitrate lyase (icl), Mls (mls), Ufo (ufo), fumarate hydratase (fhy), and proteosome major subunit (clpP) genes, complete cds; and acyl-CoA oxidase (aco) gene, partial cds Length = 15742 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 337 tggcctacaacctctcgccgtccttcaactgg 368 ||||||||||| ||||||||||||||||||| Sbjct: 4393 tggcctacaactgctcgccgtccttcaactgg 4362
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 |||| ||||||||| ||||||||||||||||||| Sbjct: 2754965 tgctcgcctacaactgctcgccgtccttcaactgg 2754999
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 ||||| |||||||| ||||||||||||||||||| Sbjct: 3826878 tgctgtcctacaactgctcgccgtccttcaactgg 3826912
>gb|AY738741.1| Rhodococcus equi strain 103 isocitrate lyase (aceA) gene, partial cds Length = 1126 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 ||||||| |||||| ||||||||||||||||||| Sbjct: 854 tgctggcgtacaactgctcgccgtccttcaactgg 888
>ref|XM_755339.1| Ustilago maydis 521 hypothetical protein (UM04285.1) partial mRNA Length = 1596 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 335 gctggcctacaacctctcgccgtccttcaactgggacgc 373 |||||| |||||||| ||||| || |||||||||||||| Sbjct: 1239 gctggcgtacaacctgtcgccatcgttcaactgggacgc 1277
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||| ||||||||| ||||||||| Sbjct: 1596037 tgctggcctacaactgctcgccgtcgttcaactgg 1596003
>gb|AY044917.1| Rhodococcus equi isocitrate lyase (aceA) gene, complete cds; and 3-hydroxyacyl CoA dehydrogenase (fadB) gene, partial cds Length = 1846 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 ||||||| |||||| ||||||||||||||||||| Sbjct: 1058 tgctggcgtacaactgctcgccgtccttcaactgg 1092
>gb|AF347026.1| Streptomyces clavuligerus isocitrate lyase (aceA) gene, complete cds Length = 1711 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||| ||| ||||||||||||||| Sbjct: 1150 tgctggcctacaactgctccccgtccttcaactgg 1184
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||| ||||||||| ||||||||| Sbjct: 5525590 tgctggcctacaactgctcgccgtcgttcaactgg 5525556
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 334 tgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||| ||||||||| ||||||||| Sbjct: 1777251 tgctggcctacaactgctcgccgtcgttcaactgg 1777217
>ref|XM_323569.1| Neurospora crassa OR74A ISOCITRATE LYASE (ISOCITRATASE) (ICL) [MIPS] (NCU04230.1) partial mRNA Length = 1647 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 418 tcgccaagctcggctacgtatggcagttcatcac 451 ||||||||||||||||| |||||||||||||| Sbjct: 1370 tcgccaagctcggctactgctggcagttcatcac 1403
>ref|XM_955761.1| Neurospora crassa OR74A ISOCITRATE LYASE (ISOCITRATASE) (ICL) [MIPS] (NCU04230.1) partial mRNA Length = 1647 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 418 tcgccaagctcggctacgtatggcagttcatcac 451 ||||||||||||||||| |||||||||||||| Sbjct: 1370 tcgccaagctcggctactgctggcagttcatcac 1403
>emb|X62697.1|NCACU3 N.crassa acu-3 gene for isocitrate lyase Length = 2098 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 418 tcgccaagctcggctacgtatggcagttcatcac 451 ||||||||||||||||| |||||||||||||| Sbjct: 1750 tcgccaagctcggctactgctggcagttcatcac 1783
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 335 gctggcctacaacctctcgccgtccttcaactgg 368 ||||||||||||| ||||||||| ||||||||| Sbjct: 59786 gctggcctacaacaactcgccgtcgttcaactgg 59753
>emb|AL807369.1|NCG15D1 Neurospora crassa DNA linkage group V cosmid contig G15D1 Length = 62178 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 418 tcgccaagctcggctacgtatggcagttcatcac 451 ||||||||||||||||| |||||||||||||| Sbjct: 50687 tcgccaagctcggctactgctggcagttcatcac 50720
>emb|AL451022.1|NC2E4 Neurospora crassa DNA linkage group V Cosmid contig 2E4 Length = 62070 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 418 tcgccaagctcggctacgtatggcagttcatcac 451 ||||||||||||||||| |||||||||||||| Sbjct: 4569 tcgccaagctcggctactgctggcagttcatcac 4602
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 335 gctggcctacaacctctcgccgtccttcaactgg 368 ||||||||||||| ||||||||| ||||||||| Sbjct: 4771110 gctggcctacaacaactcgccgtcgttcaactgg 4771077
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 339 gcctacaacctctcgccgtccttcaactgg 368 |||||||||||||| || |||||||||||| Sbjct: 1719398 gcctacaacctctccccctccttcaactgg 1719427 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 acgccgacgtgctctggatggagac 265 ||||||||||| ||||||||||||| Sbjct: 1719300 acgccgacgtgatctggatggagac 1719324
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 335 gctggcctacaacctctcgccgtccttcaactgg 368 ||||||||||||| ||||||||| ||||||||| Sbjct: 2677448 gctggcctacaacaactcgccgtcgttcaactgg 2677481
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 339 gcctacaacctctcgccgtccttcaactgg 368 |||||||||||||| || |||||||||||| Sbjct: 1408950 gcctacaacctctccccctccttcaactgg 1408979 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 acgccgacgtgctctggatggagac 265 ||||||||||| ||||||||||||| Sbjct: 1408852 acgccgacgtgatctggatggagac 1408876
>gb|M17145.1|RCCICL4 Castor bean (R.communis) isocitrate lyase mRNA, complete cds Length = 2036 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 144 ttctgggactgggatctgccacgaaccagggaagggtt 181 |||||||| |||||| ||||| |||| ||||||||||| Sbjct: 1131 ttctgggattgggatttgccaagaacaagggaagggtt 1168
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 cgccttcgcgccgcacgccga 247 ||||||||||||||||||||| Sbjct: 2048149 cgccttcgcgccgcacgccga 2048169
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 340 cctacaacctctcgccgtccttcaactgg 368 |||||||| ||||||||||||||||||| Sbjct: 3607176 cctacaactgctcgccgtccttcaactgg 3607204
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| |||||| || ||||||||| Sbjct: 2190117 gatgctggcctacaactgctcgccttcgttcaactgg 2190153
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 cgccttcgcgccgcacgccga 247 ||||||||||||||||||||| Sbjct: 2670974 cgccttcgcgccgcacgccga 2670994
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||| ||| ||||||||| ||||||||| Sbjct: 2653343 gatgctggcctataactgctcgccgtcgttcaactgg 2653307
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| |||||| || ||||||||| Sbjct: 216543 gatgctggcctacaactgctcgccatcgttcaactgg 216579
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgg 368 |||||||||||||||| |||||| || ||||||||| Sbjct: 216469 gatgctggcctacaactgctcgccatcgttcaactgg 216505
>gb|AE006033.1| Caulobacter crescentus CB15 section 359 of 359 of the complete genome Length = 8050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 tcgcccggcgcggcatgctgg 527 ||||||||||||||||||||| Sbjct: 3183 tcgcccggcgcggcatgctgg 3203
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 ttccacgccgacgcgctcgtc 483 ||||||||||||||||||||| Sbjct: 2632094 ttccacgccgacgcgctcgtc 2632114
>gb|U18678.1|LEU18678 Lycopersicon esculentum isocitrate lyase mRNA, complete cds Length = 1791 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 147 tgggactgggatctgccacgaaccagggaagggttctaccgcttccagggctc 199 ||||||||||| |||| ||||||| |||||||||||| | || |||||||| Sbjct: 1157 tgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctc 1209
>gb|L02330.1|SOYICL2A Glycine max glyoxysomal isocitrate lyase isoform 2 (ICL2) mRNA, 3' end Length = 1992 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 332 gatgctggcctacaacctctcgccgtccttcaactgggacgcgtcaggcatga 384 |||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 1244 gatgctggggtacaacctctctccatctttcaactgggatgcttctggcatga 1296
>ref|NM_189087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 ggatccagcgggaggagagg 560 |||||||||||||||||||| Sbjct: 470 ggatccagcgggaggagagg 489
>gb|AC099029.2| Drosophila melanogaster clone BACR09J12, complete sequence Length = 189618 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 cccggcgcggcatgctggcc 529 |||||||||||||||||||| Sbjct: 128300 cccggcgcggcatgctggcc 128319
>ref|XM_960317.1| Neurospora crassa OR74A hypothetical protein (NCU03024.1) partial mRNA Length = 2574 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gcccggcgcggcatgctggc 528 |||||||||||||||||||| Sbjct: 610 gcccggcgcggcatgctggc 629
>ref|XM_330210.1| Neurospora crassa OR74A hypothetical protein (NCU03024.1) partial mRNA Length = 2574 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gcccggcgcggcatgctggc 528 |||||||||||||||||||| Sbjct: 610 gcccggcgcggcatgctggc 629
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 acgagcaagcgcgcgacatcgccg 120 |||||||||| ||||||||||||| Sbjct: 2312063 acgagcaagcacgcgacatcgccg 2312086
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gtgcacggccttcgccgagg 306 |||||||||||||||||||| Sbjct: 5174146 gtgcacggccttcgccgagg 5174165
>emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chromosome 7, complete sequence Length = 185507 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ctgggactgggatctgccac 165 |||||||||||||||||||| Sbjct: 103160 ctgggactgggatctgccac 103141
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 gttccacgccgacgcgctcg 481 |||||||||||||||||||| Sbjct: 2392413 gttccacgccgacgcgctcg 2392432
>emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone B18P24 Length = 75337 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gcccggcgcggcatgctggc 528 |||||||||||||||||||| Sbjct: 46114 gcccggcgcggcatgctggc 46133
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 acgccgacgcgctcgtcacc 486 |||||||||||||||||||| Sbjct: 58629 acgccgacgcgctcgtcacc 58648
>gb|AE012091.1| Xanthomonas axonopodis pv. citri str. 306, section 469 of 469 of the complete genome Length = 14120 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gtgcacggccttcgccgagg 306 |||||||||||||||||||| Sbjct: 9841 gtgcacggccttcgccgagg 9860
>gb|AE012535.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 443 of 460 of the complete genome Length = 11047 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccacgagcaagcgcgcgaca 114 |||||||||||||||||||| Sbjct: 4854 ccacgagcaagcgcgcgaca 4835
>ref|NM_136711.2| Drosophila melanogaster CG11866-RA (CG11866), mRNA Length = 2491 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 cccggcgcggcatgctggcc 529 |||||||||||||||||||| Sbjct: 802 cccggcgcggcatgctggcc 783
>gb|DQ394570.1| Xanthomonas campestris pv. glycines polysaccharide deacetylase gene, partial cds Length = 2631 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gtgcacggccttcgccgagg 306 |||||||||||||||||||| Sbjct: 1612 gtgcacggccttcgccgagg 1593
>gb|AY060879.1| Drosophila melanogaster GM04147 full length cDNA Length = 2462 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 cccggcgcggcatgctggcc 529 |||||||||||||||||||| Sbjct: 764 cccggcgcggcatgctggcc 745
>gb|AF420484.1|AF420484 Coccidioides immitis isocitrate lyase gene, complete cds Length = 4847 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 tggcagttcatcacgctggc 457 |||||||||||||||||||| Sbjct: 2177 tggcagttcatcacgctggc 2196
>gb|AY038602.2| Coccidioides immitis isocitrate lyase mRNA, complete cds Length = 2196 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 tggcagttcatcacgctggc 457 |||||||||||||||||||| Sbjct: 1688 tggcagttcatcacgctggc 1707
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccacgagcaagcgcgcgaca 114 |||||||||||||||||||| Sbjct: 4964343 ccacgagcaagcgcgcgaca 4964324
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 ggatccagcgggaggagagg 560 |||||||||||||||||||| Sbjct: 3588355 ggatccagcgggaggagagg 3588336
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 ggatccagcgggaggagagg 560 |||||||||||||||||||| Sbjct: 66861 ggatccagcgggaggagagg 66842
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 ggatccagcgggaggagagg 560 |||||||||||||||||||| Sbjct: 144072 ggatccagcgggaggagagg 144053
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 cccggcgcggcatgctggcc 529 |||||||||||||||||||| Sbjct: 271729 cccggcgcggcatgctggcc 271710
>gb|AC005974.1|AC005974 Drosophila melanogaster, chromosome 2R, region 46E1-46F6, P1 clones DS05033, DS01913, and DS05181, complete sequence Length = 158983 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 cccggcgcggcatgctggcc 529 |||||||||||||||||||| Sbjct: 93444 cccggcgcggcatgctggcc 93463
>gb|U39807.1|PTU39807 Pinus taeda isocitrate lyase (ICL 8) mRNA, complete cds Length = 2017 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 142 tgttctgggactgggatctgccacgaaccagggaagggttctac 185 |||||||||| ||||||||||| |||| || ||||| |||||| Sbjct: 1193 tgttctgggattgggatctgcctagaactagagaaggcttctac 1236
>dbj|D78256.1| Cucurbita cv. Kurokawa Amakuri mRNA for Isocitrate Lyase, complete cds Length = 1983 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 231 ttcgcgccgcacgccgacgtgctctggatggagacgtcgagccc 274 |||||||| ||||| ||| | |||||||||| ||||||||||| Sbjct: 1230 ttcgcgccacacgcggacctaatctggatggaaacgtcgagccc 1273
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 cgccgacgcgctcgtcaccg 487 |||||||||||||||||||| Sbjct: 38002 cgccgacgcgctcgtcaccg 38021 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,680,473 Number of Sequences: 3902068 Number of extensions: 2680473 Number of successful extensions: 51769 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48262 Number of HSP's gapped (non-prelim): 3483 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)