ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3o18 |
|---|---|
| Clone Library Name | barley_pub |
>MAGD1_MOUSE (Q9QYH6) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (Dlxin-1) Length = 775 Score = 38.9 bits (89), Expect = 0.012 Identities = 24/55 (43%), Positives = 25/55 (45%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGIPSPW*TPP 134 P W P S W PPS W P W+G W V P W PP W PS W PP Sbjct: 375 PGWQSPPS-WQAPPS-WQSPQDWQGPP-DW-QVPPDWS--MPPDWSFPSDWPFPP 423
>MAGD1_RAT (Q9ES73) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (Sertoli cell necdin-related gene 1) (SNERG-1) Length = 775 Score = 38.1 bits (87), Expect = 0.020 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIP----PPCWGIPSPW*TPP 134 P W P S W PPS W P W+G P W+ P PP W PS W PP Sbjct: 375 PGWQSPPS-WQAPPS-WQSPQDWQG--------PPDWQLPPDWSMPPDWSFPSDWPFPP 423
>MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)| Length = 784 Score = 37.7 bits (86), Expect = 0.026 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 10/56 (17%) Frame = -2 Query: 271 WGVPPSCWGLPPPWRGISLSW*GVSPSWRGIP----------PPCWGIPSPW*TPP 134 W PP W PP W+G P W+G P PP W +P+ W PP Sbjct: 386 WQTPPG-WQTPPGWQG--------PPDWQGPPDWPLPPDWPLPPDWPLPTDWPLPP 432 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSC-----WGLPPPWRGISLSW*GVSPSWRGIPPPCWGIPSP 149 P W +P W +PP W LPP W I W V P W+ + P PSP Sbjct: 408 PDWPLPPD-WPLPPDWPLPTDWPLPPDW--IPTDW-PVPPDWQNLRPSPNLRPSP 458
>MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (MAGE tumor antigen CCF) Length = 778 Score = 37.7 bits (86), Expect = 0.026 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 10/56 (17%) Frame = -2 Query: 271 WGVPPSCWGLPPPWRGISLSW*GVSPSWRGIP----------PPCWGIPSPW*TPP 134 W PP W PP W+G P W+G P PP W +P+ W PP Sbjct: 380 WQTPPG-WQTPPGWQG--------PPDWQGPPDWPLPPDWPLPPDWPLPTDWPLPP 426
>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 238 Score = 34.3 bits (77), Expect = 0.29 Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 3/94 (3%) Frame = +3 Query: 66 PLKGGMGHHGEDLHLLK-EEPHPRGGVHXXXXXXXXXXXXXLHEGETPH--QEREIPLQG 236 P +GG G H K E P P+GG +G PH + P QG Sbjct: 31 PPQGGNQSQGPPPHPGKPERPPPQGGNQS--------------QGPPPHPGKPERPPPQG 76 Query: 237 GGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQGK 338 G Q TP + G P QG Q H GK Sbjct: 77 GNQSQGPPPTPGKPEGPPPQGGNQSQGPPPHPGK 110 Score = 29.6 bits (65), Expect = 7.0 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 231 QGGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQGK 338 QGG PQ+ P + +G P QG Q H GK Sbjct: 12 QGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPHPGK 47
>VLPF_MYCHR (Q49538) Variant surface antigen F precursor (VLPF prolipoprotein)| Length = 174 Score = 33.5 bits (75), Expect = 0.49 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQE------GGTPQQERGTPQQGRGIDQNQGHHQGKLIPLDI 356 G TP E+ QGG +P E G TP E+G Q G QG++QG P Sbjct: 108 GSTPTPEQGNN-QGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPE 166 Query: 357 EGN 365 +GN Sbjct: 167 QGN 169 Score = 33.5 bits (75), Expect = 0.49 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQE------GGTPQQERGTPQQGRGIDQNQGHHQGKLIPLDI 356 G TP E+ QGG +P E G TP E+G Q G QG++QG P Sbjct: 82 GSTPTPEQGNN-QGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPE 140 Query: 357 EGN 365 +GN Sbjct: 141 QGN 143 Score = 33.5 bits (75), Expect = 0.49 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQE------GGTPQQERGTPQQGRGIDQNQGHHQGKLIPLDI 356 G TP E+ QGG +P E G TP E+G Q G QG++QG P Sbjct: 56 GSTPTPEQGNN-QGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPE 114 Query: 357 EGN 365 +GN Sbjct: 115 QGN 117 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 234 GGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQGKLIPLDIEGN 365 G G+ G TP E+G Q G QG++QG P +GN Sbjct: 48 GSGTSNGSGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGN 91
>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor| Length = 932 Score = 33.5 bits (75), Expect = 0.49 Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 12/98 (12%) Frame = +3 Query: 192 EGETPHQEREIPLQGG----GSPQQEGGTPQ-----QERGTPQQGRGIDQNQG---HHQG 335 EG P QE E P +GG G QEGG PQ QE PQ+G + + G H Sbjct: 380 EGGDP-QEAEEPQEGGAPQEGGEPQEGGDPQEAREPQEAREPQEGAELPEATGTTSHRDR 438 Query: 336 KLIPLDIEGNMVDLDQGLHTLGVTIEDLQEEGIHQGTD 449 P E N + G TL + E+ EEG HQG + Sbjct: 439 GAQPGPEELNTESM--GSETLDMKAEE-PEEG-HQGRE 472
>BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protein 1)| Length = 756 Score = 33.1 bits (74), Expect = 0.64 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Frame = +3 Query: 186 LHEGETPHQEREI-------PLQGGGSPQQEGGTPQQERGTPQQGR--GIDQNQGHHQGK 338 L EG+ P QE+E P +G G P + G +E G P +G+ G+ + G +GK Sbjct: 519 LEEGQGPPQEKEDGLKEEGGPPEGKGEPPEGKGDSVKEEGGPPEGKGDGVKEEGGPPEGK 578 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%) Frame = +3 Query: 192 EGETPHQEREIPLQGGGSPQQEGGTPQ------QERGTPQQGR--GIDQNQGHHQGK 338 EG P + E P G S ++EGG P+ +E G P +G+ G+ + G +GK Sbjct: 536 EGGPPEGKGEPPEGKGDSVKEEGGPPEGKGDGVKEEGGPPEGKGDGVKEEGGPPEGK 592
>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 276 Score = 32.7 bits (73), Expect = 0.83 Identities = 30/112 (26%), Positives = 35/112 (31%) Frame = +3 Query: 3 GTRRRSPXPKEGTGHHDEDLHPLKGGMGHHGEDLHLLKEEPHPRGGVHXXXXXXXXXXXX 182 G + + P P G P +GG G H K E P G H Sbjct: 52 GNQSQGPPPHPGKPERP----PPQGGNQSQGPPPHPGKPESRPPQGGHQSQG-------- 99 Query: 183 XLHEGETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQGK 338 TP + P QGG Q P + G P QG Q H GK Sbjct: 100 ---PPPTPGKPEGPPPQGGNQSQGTPPPPGKPEGRPPQGGNQSQGPPPHPGK 148
>BIND_STRPU (P06651) Bindin precursor| Length = 481 Score = 32.7 bits (73), Expect = 0.83 Identities = 19/44 (43%), Positives = 22/44 (50%) Frame = +3 Query: 204 PHQEREIPLQGGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQG 335 PH+ P QG G P Q G P Q G P QG+ QG+ QG Sbjct: 440 PHEGMGGPPQGMGMPHQGMGGPPQGMGMPPQGQ--PYGQGYLQG 481 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +3 Query: 225 PLQGGGSPQQEGGTPQQERGTPQQGRGID-QNQGHHQGKL 341 P +G G P Q G P Q G P QG G+ Q Q + QG L Sbjct: 440 PHEGMGGPPQGMGMPHQGMGGPPQGMGMPPQGQPYGQGYL 479
>RESIL_DROME (Q9V7U0) Pro-resilin precursor| Length = 620 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +3 Query: 234 GGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQGKLIPLDIEG 362 GGG+ GG P G P QG+G Q QG + GK P D G Sbjct: 53 GGGN----GGRPSDSYGAPGQGQGQGQGQGGYAGK--PSDTYG 89
>FEN_SULTO (Q976H6) Flap structure-specific endonuclease (EC 3.1.-.-)| Length = 351 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/44 (38%), Positives = 27/44 (61%) Frame = +3 Query: 333 GKLIPLDIEGNMVDLDQGLHTLGVTIEDLQEEGIHQGTDHLQQG 464 GK + ++I+ +++LD L LG+T E L + GI GTD+ G Sbjct: 200 GKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGTDYNPDG 243
>BSL1_TRIVA (Q8MTI2) Putative surface protein bspA-like (TvBspA-like-625)| Length = 625 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQ-GRGIDQNQGHHQGKLI 344 GE P Q E P Q G +P Q G P Q P Q G D + K I Sbjct: 491 GENPSQPGENPNQPGENPNQPGENPNQPGENPSQPGENTDDPSKSKENKAI 541 Score = 31.6 bits (70), Expect = 1.8 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQ 296 GE P+Q E P Q G +P Q G P Q P Q Sbjct: 484 GENPNQPGENPSQPGENPNQPGENPNQPGENPNQ 517 Score = 31.6 bits (70), Expect = 1.8 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQ 296 GE P+Q E P Q G +P Q G P Q P Q Sbjct: 463 GENPNQPGENPSQPGENPSQPGENPNQPGENPSQ 496 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQ 296 GE P+Q E P Q G +P Q G P Q P Q Sbjct: 456 GENPNQPGENPNQPGENPSQPGENPSQPGENPNQ 489 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQ 296 GE P+Q E P Q G +P Q G P Q P Q Sbjct: 449 GENPNQPGENPNQPGENPNQPGENPSQPGENPSQ 482 Score = 30.8 bits (68), Expect = 3.2 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQ 296 GE P Q E P Q G +P Q G P Q P Q Sbjct: 470 GENPSQPGENPSQPGENPNQPGENPSQPGENPNQ 503 Score = 30.4 bits (67), Expect = 4.1 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +3 Query: 195 GETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQ 296 GE P Q E P Q G +P Q G P Q P Q Sbjct: 477 GENPSQPGENPNQPGENPSQPGENPNQPGENPNQ 510
>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 464 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGI--PSPW*TPP 134 P GV GV P G+ PP G+ GV P G+ PP G+ P+P PP Sbjct: 304 PAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP 360 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGI--PSPW*TPP 134 P GV GV P G+ PP G+ GV P G+ PP G+ P+P PP Sbjct: 297 PASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPP 353 Score = 30.0 bits (66), Expect = 5.4 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -2 Query: 307 IPLPCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGI--PSPW*TPP 134 +P P GV V P G+ PP G+ GV P G+ PP G+ P+P PP Sbjct: 280 LPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPP 339 Score = 29.3 bits (64), Expect = 9.2 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGIPSP 149 P GV GV P G+ PP G+ GV P G+ PP G+ P Sbjct: 318 PAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP 367
>YTGF_LACLA (Q9CEE2) UPF0144 protein ytgF| Length = 531 Score = 31.2 bits (69), Expect = 2.4 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +1 Query: 151 EKGFPNKEEGFLSTKERLLTKKERFL-SKEEGVPNKKEGLPNKKEGLPNKEE 303 EK +EE L K+ LTKKE L SKEE + K + L ++E L + EE Sbjct: 99 EKRLKQREE-ILDRKDDTLTKKEENLDSKEENLVRKTDTLSKREEQLAHIEE 149 Score = 29.6 bits (65), Expect = 7.0 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 10/79 (12%) Frame = +1 Query: 130 QEEGFTKEKGFPNKEEG----------FLSTKERLLTKKERFLSKEEGVPNKKEGLPNKK 279 + E F KE + +EE F ++ L ++R +EE + K + L K+ Sbjct: 61 EAEAFKKEARYTLREEEQKQRREIEDEFKQERQELKETEKRLKQREEILDRKDDTLTKKE 120 Query: 280 EGLPNKEEG*IKIKVTIKE 336 E L +KEE ++ T+ + Sbjct: 121 ENLDSKEENLVRKTDTLSK 139
>ZN207_HUMAN (O43670) Zinc finger protein 207| Length = 478 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -2 Query: 289 GVPLSCWGVPPSCWGLPPPWRGI---SLSW*GVSPSWRGIPPPCWGIPSPW*TPPL 131 G+P GVPP G+PP G+ + G+ P GIPP G+P P PP+ Sbjct: 159 GIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMP-PGMPPPV 213
>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)| Length = 501 Score = 31.2 bits (69), Expect = 2.4 Identities = 25/61 (40%), Positives = 26/61 (42%) Frame = -2 Query: 304 PLPCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGIPSPW*TPPLG* 125 PLP VPL PP+ G PPP RG G P PPP G P PP G Sbjct: 340 PLP--PVPLGIAPPPPTPRGPPPPGRG------GPPPP----PPPATGRSGPLPPPPPGA 387 Query: 124 G 122 G Sbjct: 388 G 388
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 9/46 (19%) Frame = +3 Query: 225 PLQGG------GSPQ---QEGGTPQQERGTPQQGRGIDQNQGHHQG 335 P QGG G PQ Q+GG P+ RG PQ G Q GH QG Sbjct: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQ---GPPQQGGHQQG 137
>FEN_METMA (Q8PYF6) Flap structure-specific endonuclease (EC 3.1.-.-)| Length = 338 Score = 31.2 bits (69), Expect = 2.4 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = +3 Query: 333 GKLIPLDIEGNMVDLDQGLHTLGVTIEDLQEEGIHQGTDH 452 GK + +D+E M++L++ L +LG+ + L + I GTD+ Sbjct: 198 GKNVYVDVELEMIELEETLDSLGINRDQLIDIAICVGTDY 237
>GP101_HUMAN (Q96P66) Probable G-protein coupled receptor 101| Length = 508 Score = 31.2 bits (69), Expect = 2.4 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 8/97 (8%) Frame = +3 Query: 189 HEGETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQGRGIDQ--------NQGHHQGKLI 344 HEGE +E + + G +EG T E + RG ++ + G +GK Sbjct: 266 HEGEVKAKEGRMEAKDGSLKAKEGSTGTSESSV--EARGSEEVRESSTVASDGSMEGKEG 323 Query: 345 PLDIEGNMVDLDQGLHTLGVTIEDLQEEGIHQGTDHL 455 +E N + D+G + DL E+ + G D + Sbjct: 324 STKVEENSMKADKGRTEVNQCSIDLGEDDMEFGEDDI 360
>HLYA_PROMI (P16466) Hemolysin precursor| Length = 1577 Score = 30.8 bits (68), Expect = 3.2 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 3/92 (3%) Frame = +3 Query: 198 ETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQGRGID---QNQGHHQGKLIPLDIEGNM 368 ETP+ E+ ++GGGS Q + T Q T ID N+ H QG EG Sbjct: 919 ETPNVGVEVGIKGGGSQQSQ--TDSQAVSTSINAGKIDIDSNNKLHDQGTHYQSTQEG-- 974 Query: 369 VDLDQGLHTLGVTIEDLQEEGIHQGTDHLQQG 464 + L HT T++ HQ T H +G Sbjct: 975 ISLTANTHTSEATLDK------HQTTFHETKG 1000
>ALGA_PSESM (Q887Q9) Alginate biosynthesis protein algA [Includes:| Mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) (Phosphohexomutase); Mannose-1-phosphate guanylyl transferase [GDP] (EC 2.7.7.22) (GDP-mannose pyrophosphorylase Length = 483 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +3 Query: 408 IEDLQEEGIHQGTDHLQQ----GSILLKDVGHHLPIGRLDLGKPGRNLVCCRL*LCHHRA 575 + L E+G + +HL+ GS D+G + R+ + KPG C L + HHRA Sbjct: 343 VATLNEQGRTETQNHLEVYRPWGSYDSVDMGGRFQVKRISV-KPG---ACLSLQMHHHRA 398 Query: 576 ESW 584 E W Sbjct: 399 EHW 401
>PSIP1_FELCA (Q66T72) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Transcription coactivator p75) (LEDGF/p75) Length = 530 Score = 30.8 bits (68), Expect = 3.2 Identities = 26/85 (30%), Positives = 39/85 (45%) Frame = +1 Query: 31 KKARVTTTKISIP*KEAWVTTAKISIS*KKSLTQEEGFTKEKGFPNKEEGFLSTKERLLT 210 K+ R T++ IP K + + EE +K+KG K+ K++L Sbjct: 179 KRGRPAATEVKIPKPRGRPKMVKQPCPSESDMVTEEDKSKKKGQEEKQP-----KKQL-- 231 Query: 211 KKERFLSKEEGVPNKKEGLPNKKEG 285 KK+ KEE P K+ P+KKEG Sbjct: 232 KKDEEGQKEEDKPRKE---PDKKEG 253
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 30.8 bits (68), Expect = 3.2 Identities = 23/57 (40%), Positives = 27/57 (47%) Frame = +1 Query: 133 EEGFTKEKGFPNKEEGFLSTKERLLTKKERFLSKEEGVPNKKEGLPNKKEGLPNKEE 303 E+G KEK K+E S KE KKE K + VP KK+ K P KEE Sbjct: 708 EKGEQKEKVEEEKKEAKESPKEEKAEKKE---EKPKDVPEKKKAESPVKAESPVKEE 761
>VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (hVIAAT) (Solute carrier family 32 member 1) Length = 525 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = +3 Query: 192 EGETPHQE-REIPLQGGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQGKLIPLDIEGNM 368 EGE E E P++G Q+ G P G+ Q G + GH + K+ + N+ Sbjct: 66 EGEPCGDEGAEAPVEGDIHYQRGSGAPLPPSGSKDQVGGGGEFGGHDKPKITAWEAGWNV 125 Query: 369 VDLDQGLHTLGV 404 + QG+ LG+ Sbjct: 126 TNAIQGMFVLGL 137
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGI--PSPW*TPP 134 P GV GV P G+ PP G+ GV P G+ PP G+ P+P PP Sbjct: 322 PTPGVHPPAPGVHPPAPGVHPPAPGVHPPTPGVHPPAPGVHPPAPGVHPPAPGVHPP 378 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGI--PSPW*TPP 134 P GV GV P G+ PP G+ GV P G+ PP G+ P+P PP Sbjct: 315 PAPGVHPPTPGVHPPAPGVHPPAPGVHPPAPGVHPPTPGVHPPAPGVHPPAPGVHPP 371 Score = 30.8 bits (68), Expect = 3.2 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -2 Query: 304 PLPCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGI--PSPW*TPP 134 P P P S GV P G+ PP G+ GV P G+ PP G+ P+P PP Sbjct: 301 PAPVVHPPTS--GVHPPAPGVHPPTPGVHPPAPGVHPPAPGVHPPAPGVHPPTPGVHPP 357
>TIP60_MOUSE (Q8CHK4) Histone acetyltransferase HTATIP (EC 2.3.1.48) (60 kDa Tat| interactive protein) (Tip60) Length = 513 Score = 30.4 bits (67), Expect = 4.1 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +1 Query: 190 TKERLLTKKERFLSKEEGVPNKKEGLPNKKEGLPNKE 300 T ERL KK +F KE P K GLP + G P +E Sbjct: 59 THERLDLKKIQFPKKEAKTPT-KNGLPGSRPGSPERE 94
>TIP60_HUMAN (Q92993) Histone acetyltransferase HTATIP (EC 2.3.1.48) (60 kDa Tat| interactive protein) (Tip60) (HIV-1 Tat interactive protein) (cPLA(2)-interacting protein) Length = 513 Score = 30.4 bits (67), Expect = 4.1 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +1 Query: 190 TKERLLTKKERFLSKEEGVPNKKEGLPNKKEGLPNKE 300 T ERL KK +F KE P K GLP + G P +E Sbjct: 59 THERLDLKKIQFPKKEAKTPT-KNGLPGSRPGSPERE 94
>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1| light chain LC1] Length = 2468 Score = 30.4 bits (67), Expect = 4.1 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Frame = +1 Query: 25 PLK-KARVTTTKISIP*KEAWVTTAKISIS*KKSLTQEEGFTKEKGFPNKEEGFLSTKER 201 P+K + + + T+ +P KE + K ++ K++ + KEK + TK + Sbjct: 593 PVKTETKPSVTEKEVPSKEE-PSPVKAEVAEKQATDVKPKAAKEKTVKKE------TKVK 645 Query: 202 LLTKKERFLSKEEGVPNKKEGLPNKKEGLPNKEEG*IKIKVTIKE 336 KKE ++ V K++ P KKE P KEE ++K IK+ Sbjct: 646 PEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKK 690
>MYOB_DICDI (P34092) Myosin IB heavy chain| Length = 1111 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Frame = +3 Query: 225 PLQGGGS-----PQQEGGT----PQQERGTPQQGRGIDQNQGHHQG 335 P QGGG+ PQQ GG Q+ G PQQG G Q QG Sbjct: 971 PQQGGGARPMPQPQQGGGARPMGAPQQGGAPQQGAGRQLPQPTQQG 1016
>ERF2_ZYGRO (Q9HGI4) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 662 Score = 30.4 bits (67), Expect = 4.1 Identities = 22/58 (37%), Positives = 28/58 (48%) Frame = +1 Query: 148 KEKGFPNKEEGFLSTKERLLTKKERFLSKEEGVPNKKEGLPNKKEGLPNKEEG*IKIK 321 K++ P KEE KE+ K+E K EG P KKE LP E+ +KIK Sbjct: 149 KKEEEPKKEEKKAEPKEQESKKEE---PKREGTPRPAAAKDEKKEDLPKLEK--LKIK 201
>PSIP1_BOVIN (Q8MJG1) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Fragment) Length = 483 Score = 30.0 bits (66), Expect = 5.4 Identities = 26/85 (30%), Positives = 39/85 (45%) Frame = +1 Query: 31 KKARVTTTKISIP*KEAWVTTAKISIS*KKSLTQEEGFTKEKGFPNKEEGFLSTKERLLT 210 K+ R T++ IP K + + EE +K+KG K+ K++L Sbjct: 132 KRGRPAATEVKIPKPRGRPKMVKQPCPSESDMITEEDKSKKKGQEEKQP-----KKQL-- 184 Query: 211 KKERFLSKEEGVPNKKEGLPNKKEG 285 KK+ KEE P K+ P+KKEG Sbjct: 185 KKDEEGQKEEEKPRKE---PDKKEG 206
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.0 bits (66), Expect = 5.4 Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 6/102 (5%) Frame = +3 Query: 45 HHDEDLHPLKGGMGHHG-----EDLHLLKEEPHPRGGVHXXXXXXXXXXXXXLHEGETPH 209 HH P GG H E HL PHP G + P+ Sbjct: 114 HHGGPAPPPPGGAPEHAPGVKEEYTHLPPPHPHPAYGRYHAD------------PNMDPY 161 Query: 210 QEREIPLQGGGSPQQEGGTPQQERGTPQQ-GRGIDQNQGHHQ 332 + + PL GG PQQ+ PQQ+ PQQ G G N+ Q Sbjct: 162 RYGQ-PLPGGKPPQQQQPHPQQQ--PPQQPGPGGSPNRPPQQ 200
>CARB_SULSO (Q59969) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1051 Score = 30.0 bits (66), Expect = 5.4 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 Query: 336 KLIPLDIEGNMVDLDQGLHTLGVTIEDLQEEGIHQG 443 K I IE + + G LG+T+E ++E G+H G Sbjct: 748 KYIENAIEAEIDGVSDGNKVLGITLEHIEEAGVHSG 783
>PKH3_ASHGO (Q753D9) Serine/threonine-protein kinase PKH3 (EC 2.7.11.1)| Length = 726 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/55 (27%), Positives = 29/55 (52%) Frame = +3 Query: 366 MVDLDQGLHTLGVTIEDLQEEGIHQGTDHLQQGSILLKDVGHHLPIGRLDLGKPG 530 +VD + +H++GV DL+ E + ++G +++ D G +G+ D G G Sbjct: 120 LVDTVEYIHSMGVIHRDLKPENVLLD----KEGRLMIADFGAAYTVGQSDAGSDG 170
>UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000| Length = 395 Score = 29.6 bits (65), Expect = 7.0 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +3 Query: 225 PLQGGGSPQQEGGTPQQERGTPQQGRGIDQNQ 320 P G P Q GG P Q QQG G+ Q Q Sbjct: 346 PQYGAVPPPQYGGAPPQNNNYQQQGSGMQQPQ 377
>PACS1_RAT (O88588) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 961 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +3 Query: 198 ETPHQEREIPLQGGGSPQQEGG--TPQQERGTPQQGRGIDQ 314 +TP + + LQG SP + G TP+Q+R TP + R + + Sbjct: 478 KTPMKSSKADLQGSASPSKVEGTHTPRQKRSTPLKERQLSK 518
>PACS1_MOUSE (Q8K212) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 961 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +3 Query: 198 ETPHQEREIPLQGGGSPQQEGG--TPQQERGTPQQGRGIDQ 314 +TP + + LQG SP + G TP+Q+R TP + R + + Sbjct: 478 KTPMKSSKADLQGSASPSKVEGTHTPRQKRSTPLKERQLSK 518
>SSRP1_CHICK (Q04678) Structure-specific recognition protein 1 (SSRP1)| (Recombination signal sequence recognition protein) (T160) (Fragment) Length = 669 Score = 29.6 bits (65), Expect = 7.0 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = +1 Query: 115 KKSLTQEEGFTKEKGFPNKEEGFLSTKERLLTKKERFLSKEEGVPNKKEGLPNKKE 282 KK Q +G ++KG P+K STK T E F SKE ++ +KKE Sbjct: 594 KKQEKQMKGKGEKKGSPSKSSS--STKSSAKTMSESFKSKEFVSSDESSSAESKKE 647
>MAP1B_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Neuraxin)| [Contains: MAP1 light chain LC1] Length = 2459 Score = 29.6 bits (65), Expect = 7.0 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 16/90 (17%) Frame = +1 Query: 115 KKSLTQEEGFTKEKGFPNKEEGF--LSTKERLLTKKERFLSKE--------------EGV 246 K S+T++E +KE+ P K E +T+ + K++ + KE + V Sbjct: 598 KPSVTEKEVPSKEEQSPVKAEVAEKAATESKPKVTKDKVVKKEIKTKPEEKKEEKPKKEV 657 Query: 247 PNKKEGLPNKKEGLPNKEEG*IKIKVTIKE 336 K++ P KK+ P KEE +IK IK+ Sbjct: 658 AKKEDKTPLKKDEKPKKEEAKKEIKKEIKK 687
>Y1857_THEMA (Q9X2H2) UPF0144 protein TM1857| Length = 508 Score = 29.6 bits (65), Expect = 7.0 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 136 EGFTKEKGFPNKEEGFLSTKERLLTKKERFLSKEEGVPNKKEGLPNKKEGLPNK 297 E F KE+ +EE + +ERLL ++E KEE + +++ + K L K Sbjct: 66 EEFEKERS--RREEELRALEERLLKREELLTRKEENLEKREQQVEELKANLEEK 117
>AKAP1_HUMAN (Q92667) A kinase anchor protein 1, mitochondrial precursor| (Protein kinase A-anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor prot Length = 903 Score = 29.6 bits (65), Expect = 7.0 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +1 Query: 175 EGFLSTKERLLTKKERFLSKEEGVPNKKEGLPNKKEGLPNKEE 303 EG L +E L +E EEG+ +E L +EGL EE Sbjct: 301 EGELGNEESLDRNEEGLDRNEEGLDRNEESLDRNEEGLDRNEE 343
>CRU2_BRANA (P33524) Cruciferin BnC2 precursor (11S globulin) (12S storage| protein) [Contains: Cruciferin BnC2 alpha subunit; Cruciferin BnC2 beta subunit] Length = 496 Score = 29.6 bits (65), Expect = 7.0 Identities = 28/93 (30%), Positives = 38/93 (40%) Frame = +3 Query: 210 QEREIPLQGGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQGKLIPLDIEGNMVDLDQGL 389 Q+ + G GSP EG +G QQG+G Q QG QGK +G QG Sbjct: 111 QDSSVFQPGSGSPFGEG------QGQGQQGQG--QGQGQGQGKGQQGQGKGQQ-GQSQGQ 161 Query: 390 HTLGVTIEDLQEEGIHQGTDHLQQGSILLKDVG 488 G D+ HQ +H++ G + G Sbjct: 162 QGQGQGFRDM-----HQKVEHIRSGDTIATHPG 189
>PWP1_HUMAN (Q13610) Periodic tryptophan protein 1 homolog (Keratinocyte| protein IEF SSP 9502) Length = 501 Score = 29.3 bits (64), Expect = 9.2 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 17/123 (13%) Frame = +3 Query: 231 QGGGSPQQEGGTPQQ----------------ERGTPQQGRGIDQNQGHHQGKLIPLDIEG 362 +GGGS ++E G+P + E G P+ R +D ++ L D++ Sbjct: 46 EGGGSDEEETGSPSEDGMQSARTQARPREPLEDGDPEDDRTLDDDE------LAEYDLDK 99 Query: 363 NMVDLDQGLHTLGVTIEDLQEEGIHQGTDHLQQGSILLKDVGHHLPIGRLD-LGKPGRNL 539 + D TLG ++ L G + Q + LKD + R D L KP NL Sbjct: 100 YDEEGDPDAETLGESLLGLTVYGSND-----QDPYVTLKDTEQY---EREDFLIKPSDNL 151 Query: 540 VCC 548 + C Sbjct: 152 IVC 154
>MAP1B_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) (MAP1.2)| (MAP1(X)) [Contains: MAP1 light chain LC1] Length = 2464 Score = 29.3 bits (64), Expect = 9.2 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 16/90 (17%) Frame = +1 Query: 115 KKSLTQEEGFTKEKGFPNKEEGFLS---------TKERLLTK--KERFLSKEEGVPNKK- 258 K S+T++E +KE+ P K E TK++++ K K + K+E P K+ Sbjct: 599 KPSVTEKEVSSKEEQSPVKAEVAEKQATESKPKVTKDKVVKKEIKTKLEEKKEEKPKKEV 658 Query: 259 ----EGLPNKKEGLPNKEEG*IKIKVTIKE 336 + P KK+ P KEE +IK IK+ Sbjct: 659 VKKEDKTPLKKDEKPRKEEVKKEIKKEIKK 688
>IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2| Length = 880 Score = 29.3 bits (64), Expect = 9.2 Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 9/122 (7%) Frame = +3 Query: 9 RRRSPXPKEGTGHHDEDLHPLKGGMGHHG--------EDLHLLKEEPHPRGGVHXXXXXX 164 R SP K+ G D +GG + ED +++ P R G Sbjct: 102 REESPG-KQDAGRPPRDKDTRQGGGSSYPPSRSPFQKEDSNIIVSRPIQRTGPSRPNSGG 160 Query: 165 XXXXXXXLHEGETPHQEREIPLQGGGSPQ-QEGGTPQQERGTPQQGRGIDQNQGHHQGKL 341 +G +Q P QGGG Q G P Q G Q RG Q G +QG Sbjct: 161 GYQGNRGPGQGGGGYQGNRGPGQGGGGYQGNRGPGPGQGGGGYQGNRGPGQGGGGYQGNR 220 Query: 342 IP 347 P Sbjct: 221 GP 222
>PSIP1_HUMAN (O75475) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Transcriptional coactivator p75/p52) (Dense fine speckles 70 kDa protein) (DFS 70) (CLL-associated antigen KW-7) Length = 530 Score = 29.3 bits (64), Expect = 9.2 Identities = 24/85 (28%), Positives = 36/85 (42%) Frame = +1 Query: 31 KKARVTTTKISIP*KEAWVTTAKISIS*KKSLTQEEGFTKEKGFPNKEEGFLSTKERLLT 210 K+ R T++ IP K + + EE +K+KG K+ + Sbjct: 179 KRGRPAATEVKIPKPRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQP-------KKQP 231 Query: 211 KKERFLSKEEGVPNKKEGLPNKKEG 285 KK+ KEE P K+ P+KKEG Sbjct: 232 KKDEEGQKEEDKPRKE---PDKKEG 253
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 29.3 bits (64), Expect = 9.2 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = -2 Query: 298 PCWGVPLSCWGVPPSCWGLPPPWRGISLSW*GVSPSWRGIPPPCWGIPSPW*TPP 134 P + P + PP + PPP + ++ P++ PPP + P P +PP Sbjct: 407 PTYSPPPPTYSPPPPTYAQPPP---LPPTYSPPPPAYSPPPPPTYSPPPPTYSPP 458
>VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (rGVAT) (Solute carrier family 32 member 1) Length = 525 Score = 29.3 bits (64), Expect = 9.2 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Frame = +3 Query: 192 EGETPHQEREIPLQGGGSPQQEGGTPQQERGTPQQGRGI-DQNQGHHQGKLIPLDIEGNM 368 EGE E P G Q GG P G+ Q G + GH + K+ + N+ Sbjct: 66 EGEPCGDEGAEPPVEGDIHYQRGGAPLPPSGSKDQAVGAGGEFGGHDKPKITAWEAGWNV 125 Query: 369 VDLDQGLHTLGV 404 + QG+ LG+ Sbjct: 126 TNAIQGMFVLGL 137
>SIF1_DROME (P91621) Protein still life, isoform SIF type 1| Length = 2072 Score = 29.3 bits (64), Expect = 9.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 231 QGGGSPQQEGGTPQQERGTPQQGRGIDQNQGHHQ 332 Q G Q G PQQ++G PQ+ ++Q HHQ Sbjct: 532 QSYGQQQSSGQHPQQQQGPPQRS---SRHQHHHQ 562 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,157,156 Number of Sequences: 219361 Number of extensions: 1690342 Number of successful extensions: 5817 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 5030 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5673 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
