ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3o14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 555 e-155
2dbj|AK111407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
3dbj|AK106215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
4dbj|AK102635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
5dbj|AK058911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
6gb|AY103758.1| Zea mays PCO086041 mRNA sequence 444 e-121
7gb|BT018041.1| Zea mays clone EL01N0531A03.c mRNA sequence 420 e-114
8ref|NM_185778.1| Oryza sativa (japonica cultivar-group), predic... 337 2e-89
9dbj|AK099911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
10gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
12ref|NM_104138.2| Arabidopsis thaliana peptidase AT1G52600 mRNA, ... 127 4e-26
13gb|AY096703.1| Arabidopsis thaliana putative signal peptidase su... 127 4e-26
14gb|AY064032.1| Arabidopsis thaliana putative signal peptidase su... 127 4e-26
15gb|AY084305.1| Arabidopsis thaliana clone 103157 mRNA, complete ... 127 4e-26
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
17dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
18dbj|AK220581.1| Arabidopsis thaliana mRNA for hypothetical prote... 119 1e-23
19dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
21dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
22gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 se... 48 0.031
23ref|NM_112441.3| Arabidopsis thaliana peptidase AT3G15710 mRNA, ... 46 0.12
24gb|BT015660.1| Arabidopsis thaliana At3g15710 gene, complete cds 46 0.12
25gb|BT015149.1| Arabidopsis thaliana At3g15710 gene, complete cds 46 0.12
26gb|AY086118.1| Arabidopsis thaliana clone 21563 mRNA, complete s... 46 0.12
27ref|XM_512154.1| PREDICTED: Pan troglodytes similar to microsoma... 44 0.49
28ref|NM_033280.1| Homo sapiens SEC11-like 3 (S. cerevisiae) (SEC1... 44 0.49
29gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete se... 44 0.49
30emb|CR858452.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0613 (from cl... 44 0.49
31gb|AC099842.2| Homo sapiens chromosome 11, clone RP11-747E23, co... 44 0.49
32gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, co... 44 0.49
33gb|AC100768.2| Homo sapiens chromosome 11, clone RP11-945A11, co... 44 0.49
34gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, com... 44 0.49
35gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-4... 44 0.49
36gb|AF212233.1|AF212233 Homo sapiens microsomal signal peptidase ... 44 0.49
37gb|BC009703.1| Homo sapiens SEC11-like 3 (S. cerevisiae), mRNA (... 44 0.49
38gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 42 1.9
39emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC... 42 1.9
40emb|AJ000744.1|CJAJ744 Campylobacter jejuni gmk gene, partial 42 1.9
41gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, com... 42 1.9
42gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete seq... 42 1.9
43dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.9
44gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.9
45gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, comp... 40 7.6
46gb|DQ008592.1| Escherichia coli serogroup O174 O antigen gene cl... 40 7.6
47gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.6
48ref|XM_955118.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
49ref|XM_325504.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
50gb|AC024812.2| Caenorhabditis elegans cosmid Y54E10BR, complete ... 40 7.6
51emb|AL354831.18| Human DNA sequence from clone RP11-188A23 on ch... 40 7.6
52gb|AC131886.5| Rattus norvegicus 4 BAC CH230-53A1 (Children's Ho... 40 7.6
53emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 7.6
54emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.6
55emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.6
56emb|BX927395.18| Zebrafish DNA sequence from clone CH211-72A16 i... 40 7.6
57gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.6
58gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Canc... 40 7.6
59ref|NM_058691.3| Caenorhabditis elegans Y54E10BR.5 (Y54E10BR.5) ... 40 7.6
60emb|BX826032.1|CNS0A69G Arabidopsis thaliana Full-length cDNA Co... 40 7.6
61emb|BX548006.10| Zebrafish DNA sequence from clone DKEY-127P11, ... 40 7.6
62emb|BX927116.18| Zebrafish DNA sequence from clone DKEY-261D11 i... 40 7.6
63emb|AL929274.7| Zebrafish DNA sequence from clone CH211-79M20 in... 40 7.6
64gb|AC119259.15| Mus musculus chromosome 18, clone RP24-285N19, c... 40 7.6
65gb|AD000014.1|MSGY423 Mycobacterium tuberculosis sequence from c... 40 7.6
66gb|AC118263.8| Mus musculus chromosome 1, clone RP24-502N12, com... 40 7.6

>dbj|AK071238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085B09, full
           insert sequence
          Length = 1035

 Score =  555 bits (280), Expect = e-155
 Identities = 409/452 (90%)
 Strand = Plus / Plus

                                                                       
Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
           |||||||| |||||||||||   ||||||||||||||| ||||| ||| ||||||| |||
Sbjct: 89  gagatgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtc 148

                                                                       
Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226
           ||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 149 ctcgcgcaaatcatcagcctcggtatgattgttacctcggcactgatcatatggaaggga 208

                                                                       
Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286
           ||||||||||| || ||||||||||| || || || ||||| ||||||||||||||||||
Sbjct: 209 ttgatggttgcaacggggagcgagtccccagtggttgtggtcctttctggtagcatggag 268

                                                                       
Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346
           ||||||||||||||||| ||||| || ||| | ||||||||| |||||||||||||||| 
Sbjct: 269 cctggatttaaaaggggcgatatcctttttctacacatgagcaaagatcctatccgcaca 328

                                                                       
Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406
           ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggagagatagttgttttcaacattgatggccgtgaaattccaattgttcaccgtgtgatt 388

                                                                       
Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466
           ||||| ||||||||| | |||||||  |||||||||||||||||||||||||||||||||
Sbjct: 389 aaggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggtgataataat 448

                                                                       
Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526
           |||||||| ||||| ||| | |||||||| |||||||||||||||||  | |||||||||
Sbjct: 449 tttggggacgaccgtcttctttatgcacatgggcagctttggcttcaccaacatcacatt 508

                                           
Query: 527 atgggacgggctgtaggctatctaccatatgt 558
           ||||||||||||||||||| ||| ||||||||
Sbjct: 509 atgggacgggctgtaggctttcttccatatgt 540



to top

>dbj|AK111407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E09, full
           insert sequence
          Length = 1517

 Score =  513 bits (259), Expect = e-142
 Identities = 406/455 (89%)
 Strand = Plus / Plus

                                                                       
Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
           |||||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| 
Sbjct: 243 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 302

                                                                       
Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226
           ||  |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| 
Sbjct: 303 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 362

                                                                       
Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286
           || || ||||  ||||| || || || || || |||||||||||||||||||||||||| 
Sbjct: 363 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 422

                                                                       
Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346
           |||||||||||||| ||||| || |||||||||||||||||| |||| ||||||||||||
Sbjct: 423 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 482

                                                                       
Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 483 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 542

                                                                       
Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466
           ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| |||
Sbjct: 543 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 602

                                                                       
Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526
           |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 603 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 662

                                              
Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561
           ||||| || ||||| || | ||| |||||||||||
Sbjct: 663 atggggcgagctgttggttttctgccatatgttgg 697



to top

>dbj|AK106215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H01, full
           insert sequence
          Length = 1063

 Score =  513 bits (259), Expect = e-142
 Identities = 406/455 (89%)
 Strand = Plus / Plus

                                                                       
Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
           |||||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| 
Sbjct: 232 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 291

                                                                       
Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226
           ||  |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| 
Sbjct: 292 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 351

                                                                       
Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286
           || || ||||  ||||| || || || || || |||||||||||||||||||||||||| 
Sbjct: 352 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 411

                                                                       
Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346
           |||||||||||||| ||||| || |||||||||||||||||| |||| ||||||||||||
Sbjct: 412 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 471

                                                                       
Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 472 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 531

                                                                       
Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466
           ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| |||
Sbjct: 532 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 591

                                                                       
Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526
           |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 592 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 651

                                              
Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561
           ||||| || ||||| || | ||| |||||||||||
Sbjct: 652 atggggcgagctgttggttttctgccatatgttgg 686



to top

>dbj|AK102635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099N11, full
           insert sequence
          Length = 1065

 Score =  513 bits (259), Expect = e-142
 Identities = 406/455 (89%)
 Strand = Plus / Plus

                                                                       
Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
           |||||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| 
Sbjct: 234 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 293

                                                                       
Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226
           ||  |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| 
Sbjct: 294 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 353

                                                                       
Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286
           || || ||||  ||||| || || || || || |||||||||||||||||||||||||| 
Sbjct: 354 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 413

                                                                       
Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346
           |||||||||||||| ||||| || |||||||||||||||||| |||| ||||||||||||
Sbjct: 414 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 473

                                                                       
Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 474 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 533

                                                                       
Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466
           ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| |||
Sbjct: 534 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 593

                                                                       
Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526
           |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 594 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 653

                                              
Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561
           ||||| || ||||| || | ||| |||||||||||
Sbjct: 654 atggggcgagctgttggttttctgccatatgttgg 688



to top

>dbj|AK058911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G10, full
           insert sequence
          Length = 1083

 Score =  513 bits (259), Expect = e-142
 Identities = 406/455 (89%)
 Strand = Plus / Plus

                                                                       
Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
           |||||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| 
Sbjct: 265 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 324

                                                                       
Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226
           ||  |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| 
Sbjct: 325 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 384

                                                                       
Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286
           || || ||||  ||||| || || || || || |||||||||||||||||||||||||| 
Sbjct: 385 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 444

                                                                       
Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346
           |||||||||||||| ||||| || |||||||||||||||||| |||| ||||||||||||
Sbjct: 445 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 504

                                                                       
Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 505 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 564

                                                                       
Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466
           ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| |||
Sbjct: 565 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 624

                                                                       
Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526
           |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 625 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 684

                                              
Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561
           ||||| || ||||| || | ||| |||||||||||
Sbjct: 685 atggggcgagctgttggttttctgccatatgttgg 719



to top

>gb|AY103758.1| Zea mays PCO086041 mRNA sequence
          Length = 1028

 Score =  444 bits (224), Expect = e-121
 Identities = 395/452 (87%)
 Strand = Plus / Plus

                                                                       
Query: 110 atggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtcctc 169
           ||||||||| |||| |||  | ||||||||||||| || |||||| ||||||| || |||
Sbjct: 149 atggggttcgtcggagacacgatggagtcgatccgctccatgcagatccgccaagtgctc 208

                                                                       
Query: 170 acgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaagggattg 229
           | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 209 atgcagatcatcagcctcggtatgattgttacctctgcattaatcatatggaagggtttg 268

                                                                       
Query: 230 atggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcct 289
           || |||   || ||||||||||| || ||||| ||||| || || |||||||||||||||
Sbjct: 269 atagttttcacggggagcgagtcaccagttgtagtggtgctctcgggtagcatggagcct 328

                                                                       
Query: 290 ggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcactgga 349
           |||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| |||
Sbjct: 329 ggatttaaaaggggtgatatcctgtttttgcatatgagcaaagatcctattcgcacagga 388

                                                                       
Query: 350 gaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaag 409
           |||||||||||||| ||| | ||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 389 gaaatagttgttttcaatgtcgatggtcgtgagattccaattgttcaccgagtgattaag 448

                                                                       
Query: 410 gttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataatttt 469
           || |||||||| || || | || |||||| || |||||||| |||||||| |||||||||
Sbjct: 449 gtccatgaacgtcaggacactgcagaagtggacatcctcaccaaaggtgacaataatttt 508

                                                                       
Query: 470 ggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacattatg 529
           |||||||||||||| || |||||||| |||||||||||||| ||| | ||||||||||||
Sbjct: 509 ggggatgaccgactattatatgcacatgggcagctttggctccagcaacatcacattatg 568

                                           
Query: 530 ggacgggctgtaggctatctaccatatgttgg 561
           ||||| || || ||||| || |||||||||||
Sbjct: 569 ggacgtgcggtgggctaccttccatatgttgg 600



to top

>gb|BT018041.1| Zea mays clone EL01N0531A03.c mRNA sequence
          Length = 869

 Score =  420 bits (212), Expect = e-114
 Identities = 392/452 (86%)
 Strand = Plus / Plus

                                                                       
Query: 110 atggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtcctc 169
           ||||||||| |||| |||  | ||||||||||||| || |||||| ||||||| || |||
Sbjct: 116 atggggttcgtcggagacacgatggagtcgatccgctccatgcagatccgccaagtgctc 175

                                                                       
Query: 170 acgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaagggattg 229
           | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 176 atgcagatcatcagcctcggtatgattgttacctctgcattaatcatatggaagggtttg 235

                                                                       
Query: 230 atggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcct 289
           || |||    | ||||||||||| || ||||| ||||| || || |||||||||||||||
Sbjct: 236 atagttttcgcggggagcgagtcaccagttgtagtggtgctctcgggtagcatggagcct 295

                                                                       
Query: 290 ggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcactgga 349
           |||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| |||
Sbjct: 296 ggatttaaaaggggtgatatcctgtttttgcatatgagcaaagatcctattcgcacagga 355

                                                                       
Query: 350 gaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaag 409
           |||||||||||||| ||| | ||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 356 gaaatagttgttttcaatgtcgatggtcgtgagattccaattgttcaccgagtgattaag 415

                                                                       
Query: 410 gttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataatttt 469
           || |||||||| || || | || |||||| || |||||||| |||||||| |||||||||
Sbjct: 416 gtccatgaacgtcaggacactgcagaagtggacatcctcaccaaaggtgacaataatttt 475

                                                                       
Query: 470 ggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacattatg 529
           |||||||||||||| || |||||||| || ||||||||||| ||| | || |||||||||
Sbjct: 476 ggggatgaccgactattatatgcacatggccagctttggctccagcaacaccacattatg 535

                                           
Query: 530 ggacgggctgtaggctatctaccatatgttgg 561
           ||||| || || ||||| || |||||||||||
Sbjct: 536 ggacgtgcggtgggctaccttccatatgttgg 567



to top

>ref|NM_185778.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 651

 Score =  337 bits (170), Expect = 2e-89
 Identities = 245/270 (90%)
 Strand = Plus / Plus

                                                                       
Query: 188 ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247
           ||||||||||||||||| |||||||||||||||||||| || || ||||  ||||| || 
Sbjct: 133 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 192

                                                                       
Query: 248 gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggggtgat 307
           || || || || |||||||||||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 193 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgac 252

                                                                       
Query: 308 attctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgtttttaat 367
           || |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 253 atcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaat 312

                                                                       
Query: 368 attgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaagaa 427
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || 
Sbjct: 313 gttgatggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggag 372

                                         
Query: 428 agtggagaagttgatatcctcacgaaaggt 457
           |||| ||||||||| |||||||| ||||||
Sbjct: 373 agtgcagaagttgacatcctcacaaaaggt 402



 Score =  117 bits (59), Expect = 4e-23
 Identities = 95/107 (88%)
 Strand = Plus / Plus

                                                                       
Query: 455 ggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttcag 514
           |||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 454 ggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttcag 513

                                                          
Query: 515 aagcatcacattatgggacgggctgtaggctatctaccatatgttgg 561
            | ||||| |||||||| || ||||| || | ||| |||||||||||
Sbjct: 514 caacatcatattatggggcgagctgttggttttctgccatatgttgg 560



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                       
Query: 110 atggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtcctc 169
           ||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| || 
Sbjct: 1   atggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtgctg 60

                          
Query: 170 acgcagatcatcagc 184
            |||| |||||||||
Sbjct: 61  gcgcaaatcatcagc 75



to top

>dbj|AK099911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D13, full
           insert sequence
          Length = 1489

 Score =  168 bits (85), Expect = 1e-38
 Identities = 285/351 (81%), Gaps = 3/351 (0%)
 Strand = Plus / Plus

                                                                       
Query: 202 ctcggcattgatcatatggaagggattgatggttgcgacagggagcgagtcgccggttgt 261
           |||||||||||| |||||||||||||||||  |   ||||||||| ||||||||  | ||
Sbjct: 163 ctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagt 222

                                                                       
Query: 262 ggtggttctttctggtagcatggagcctggatttaaaaggggtgatattctgtttttgca 321
            |||||||| ||||  ||||||| || ||||||| ||||||| ||||| |||||||||||
Sbjct: 223 tgtggttctatctgaaagcatggggcttggatttgaaaggggggatatcctgtttttgca 282

                                                                       
Query: 322 catgagccaagatcctatccgcactggagaaatagttgtttttaatattgatggccgtga 381
            |||||| || | ||||| || || ||||| ||||||||||| ||   ||||||||||||
Sbjct: 283 aatgagcaaacaccctatacgaacaggagatatagttgttttcaa---tgatggccgtga 339

                                                                       
Query: 382 aattccaattgttcaccgtgtgattaaggttcatgaacgccaagaaagtggagaagttga 441
           ||||||||| || || || || ||| ||||||| ||||| |  || | || | |||||||
Sbjct: 340 aattccaatcgtccatcgcgttattgaggttcacgaacgacgggataatgcacaagttga 399

                                                                       
Query: 442 tatcctcacgaaaggtgataataattttggggatgaccgacttttgtatgcacaagggca 501
           | ||||||| |||||||| || |||  |  ||| |||||| || | ||  |||| |||||
Sbjct: 400 tttcctcacaaaaggtgacaacaatcctatggacgaccgaattctttacacacatgggca 459

                                                              
Query: 502 gctttggcttcagaagcatcacattatgggacgggctgtaggctatctacc 552
           ||||||||||||| | |||||||| |||||||||||  |||| ||||||||
Sbjct: 460 gctttggcttcagcaacatcacatcatgggacgggccatagggtatctacc 510



to top

>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0082F22, complete sequence
          Length = 176038

 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Plus

                                                                          
Query: 188    ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247
              ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||
Sbjct: 112480 ggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagc 112539

                                                                     
Query: 248    gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggg 302
              ||||| || || || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 112540 gagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggg 112594



 Score =  115 bits (58), Expect = 2e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                          
Query: 454    aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513
              ||||||||||||||||||||| ||||| ||| | |||||||| |||||||||||||||||
Sbjct: 114516 aggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttca 114575

                                            
Query: 514    gaagcatcacattatgggacgggctgtagg 543
                | ||||||||||||||||||||||||||
Sbjct: 114576 ccaacatcacattatgggacgggctgtagg 114605



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                          
Query: 107    gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
              |||||||| |||||||||||   ||||||||||||||| ||||| ||| ||||||| |||
Sbjct: 111806 gagatgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtc 111865

                                      
Query: 167    ctcacgcagatcatcagcctcggt 190
              ||| |||| |||||||||||||||
Sbjct: 111866 ctcgcgcaaatcatcagcctcggt 111889



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                    
Query: 374    ggccgtgaaattccaattgttcaccgtgtgattaaggt 411
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 114174 ggccgtgaaattccaattgttcaccgtgtgattaaggt 114211



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                     
Query: 320    cacatgagccaagatcctatccgcactggagaaatagttgtttttaatattgatg 374
              ||||||||| |||||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 113982 cacatgagcaaagatcctatccgcacaggagagatagttgttttcaacattgatg 114036



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                
Query: 408    aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457
              |||| ||||||||| | |||||||  ||||||||||||||||||||||||
Sbjct: 114327 aggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggt 114376



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Plus

                                                                            
Query: 188      ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247
                ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||
Sbjct: 13149703 ggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagc 13149762

                                                                       
Query: 248      gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggg 302
                ||||| || || || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 13149763 gagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggg 13149817



 Score =  115 bits (58), Expect = 2e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                            
Query: 454      aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513
                ||||||||||||||||||||| ||||| ||| | |||||||| |||||||||||||||||
Sbjct: 13151739 aggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttca 13151798

                                              
Query: 514      gaagcatcacattatgggacgggctgtagg 543
                  | ||||||||||||||||||||||||||
Sbjct: 13151799 ccaacatcacattatgggacgggctgtagg 13151828



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                            
Query: 107      gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
                |||||||| |||||||||||   ||||||||||||||| ||||| ||| ||||||| |||
Sbjct: 13149029 gagatgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtc 13149088

                                        
Query: 167      ctcacgcagatcatcagcctcggt 190
                ||| |||| |||||||||||||||
Sbjct: 13149089 ctcgcgcaaatcatcagcctcggt 13149112



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                      
Query: 374      ggccgtgaaattccaattgttcaccgtgtgattaaggt 411
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 13151397 ggccgtgaaattccaattgttcaccgtgtgattaaggt 13151434



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 320      cacatgagccaagatcctatccgcactggagaaatagttgtttttaatattgatg 374
                ||||||||| |||||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 13151205 cacatgagcaaagatcctatccgcacaggagagatagttgttttcaacattgatg 13151259



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 408      aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457
                |||| ||||||||| | |||||||  ||||||||||||||||||||||||
Sbjct: 13151550 aggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggt 13151599



to top

>ref|NM_104138.2| Arabidopsis thaliana peptidase AT1G52600 mRNA, complete cds
          Length = 818

 Score =  127 bits (64), Expect = 4e-26
 Identities = 268/336 (79%)
 Strand = Plus / Plus

                                                                       
Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237
           |||||| || || |||||||| || || || |||||||||||||| |  ||||||  || 
Sbjct: 156 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 215

                                                                       
Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297
            || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || |||||
Sbjct: 216 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 275

                                                                       
Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357
            ||||| |||||  |||| |||||||||||  |||| || || ||  | || ||||| ||
Sbjct: 276 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 335

                                                                       
Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417
           |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct: 336 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 395

                                                                       
Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477
           | |  || | |  |||||||||||| | || ||||||||||| ||||| | ||| |||||
Sbjct: 396 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 455

                                               
Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513
           | ||||| |||||||  |||| ||||||||||||||
Sbjct: 456 cagacttctgtatgctgaaggacagctttggcttca 491



to top

>gb|AY096703.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600)
           mRNA, complete cds
          Length = 574

 Score =  127 bits (64), Expect = 4e-26
 Identities = 268/336 (79%)
 Strand = Plus / Plus

                                                                       
Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237
           |||||| || || |||||||| || || || |||||||||||||| |  ||||||  || 
Sbjct: 69  catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 128

                                                                       
Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297
            || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || |||||
Sbjct: 129 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 188

                                                                       
Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357
            ||||| |||||  |||| |||||||||||  |||| || || ||  | || ||||| ||
Sbjct: 189 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 248

                                                                       
Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417
           |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct: 249 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 308

                                                                       
Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477
           | |  || | |  |||||||||||| | || ||||||||||| ||||| | ||| |||||
Sbjct: 309 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 368

                                               
Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513
           | ||||| |||||||  |||| ||||||||||||||
Sbjct: 369 cagacttctgtatgctgaaggacagctttggcttca 404



to top

>gb|AY064032.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600)
           mRNA, complete cds
          Length = 825

 Score =  127 bits (64), Expect = 4e-26
 Identities = 268/336 (79%)
 Strand = Plus / Plus

                                                                       
Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237
           |||||| || || |||||||| || || || |||||||||||||| |  ||||||  || 
Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214

                                                                       
Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297
            || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || |||||
Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274

                                                                       
Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357
            ||||| |||||  |||| |||||||||||  |||| || || ||  | || ||||| ||
Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 334

                                                                       
Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417
           |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 394

                                                                       
Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477
           | |  || | |  |||||||||||| | || ||||||||||| ||||| | ||| |||||
Sbjct: 395 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 454

                                               
Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513
           | ||||| |||||||  |||| ||||||||||||||
Sbjct: 455 cagacttctgtatgctgaaggacagctttggcttca 490



to top

>gb|AY084305.1| Arabidopsis thaliana clone 103157 mRNA, complete sequence
          Length = 691

 Score =  127 bits (64), Expect = 4e-26
 Identities = 268/336 (79%)
 Strand = Plus / Plus

                                                                       
Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237
           |||||| || || |||||||| || || || |||||||||||||| |  ||||||  || 
Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214

                                                                       
Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297
            || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || |||||
Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274

                                                                       
Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357
            ||||| |||||  |||| |||||||||||  |||| || || ||  | || ||||| ||
Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 334

                                                                       
Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417
           |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 394

                                                                       
Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477
           | |  || | |  |||||||||||| | || ||||||||||| ||||| | ||| |||||
Sbjct: 395 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 454

                                               
Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513
           | ||||| |||||||  |||| ||||||||||||||
Sbjct: 455 cagacttctgtatgctgaaggacagctttggcttca 490



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                           
Query: 188     ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247
               ||||||||||||||||| |||||||||||||||||||| || || ||||  ||||| || 
Sbjct: 9270059 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 9270000

                                                                    
Query: 248     gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaag 300
               || || || || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9269999 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaag 9269947



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                           
Query: 454     aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513
               ||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 9269009 aggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttca 9268950

                                          
Query: 514     gaagcatcacattatgggacgggctgt 540
               | | ||||| |||||||| || |||||
Sbjct: 9268949 gcaacatcatattatggggcgagctgt 9268923



 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                           
Query: 301     gggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgt 360
               |||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 9269510 gggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgt 9269451

                             
Query: 361     ttttaatattgatg 374
               ||||||| ||||||
Sbjct: 9269450 ttttaatgttgatg 9269437



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                           
Query: 107     gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
               |||||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| 
Sbjct: 9271866 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 9271807

                                 
Query: 167     ctcacgcagatcatcagc 184
               ||  |||| |||||||||
Sbjct: 9271806 ctggcgcaaatcatcagc 9271789



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                     
Query: 374     ggccgtgaaattccaattgttcaccgtgtgattaaggt 411
               |||||||||||||||||||||||||||||||| |||||
Sbjct: 9269339 ggccgtgaaattccaattgttcaccgtgtgatcaaggt 9269302



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                 
Query: 408     aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457
               |||||||||||||||| || |||| ||||||||| |||||||| ||||||
Sbjct: 9269209 aggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggt 9269160



to top

>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0676F10
          Length = 142510

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 188   ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247
             ||||||||||||||||| |||||||||||||||||||| || || ||||  ||||| || 
Sbjct: 37400 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 37341

                                                                  
Query: 248   gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaag 300
             || || || || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 37340 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaag 37288



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                         
Query: 454   aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513
             ||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 36350 aggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttca 36291

                                        
Query: 514   gaagcatcacattatgggacgggctgt 540
             | | ||||| |||||||| || |||||
Sbjct: 36290 gcaacatcatattatggggcgagctgt 36264



 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                         
Query: 301   gggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgt 360
             |||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 36851 gggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgt 36792

                           
Query: 361   ttttaatattgatg 374
             ||||||| ||||||
Sbjct: 36791 ttttaatgttgatg 36778



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                         
Query: 107   gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
             |||||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| 
Sbjct: 39207 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 39148

                               
Query: 167   ctcacgcagatcatcagc 184
             ||  |||| |||||||||
Sbjct: 39147 ctggcgcaaatcatcagc 39130



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                   
Query: 374   ggccgtgaaattccaattgttcaccgtgtgattaaggt 411
             |||||||||||||||||||||||||||||||| |||||
Sbjct: 36680 ggccgtgaaattccaattgttcaccgtgtgatcaaggt 36643



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 408   aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457
             |||||||||||||||| || |||| ||||||||| |||||||| ||||||
Sbjct: 36550 aggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggt 36501



to top

>dbj|AK220581.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL16-87-D04
          Length = 783

 Score =  119 bits (60), Expect = 1e-23
 Identities = 267/336 (79%)
 Strand = Plus / Plus

                                                                       
Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237
           |||||| || || |||||||| || || || |||||||||||||| |  ||||||  || 
Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214

                                                                       
Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297
            || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || |||||
Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274

                                                                       
Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357
            ||||| |||||  |||| |||||||||||  |||| ||  | ||  | || ||||| ||
Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccggttcgagcaggtgaaattgt 334

                                                                       
Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417
           |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| ||
Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 394

                                                                       
Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477
           | |  || | |  |||||||||||| | || ||||||||||| ||||| | ||| |||||
Sbjct: 395 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 454

                                               
Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513
           | ||||| |||||||  |||| ||||||||||||||
Sbjct: 455 cagacttctgtatgctgaaggacagctttggcttca 490



to top

>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0038C05
          Length = 152941

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166
           |||||||||||||||||||||  | | ||||| ||||| |||||||||||||||||||| 
Sbjct: 276 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 217

                             
Query: 167 ctcacgcagatcatcagc 184
           ||  |||| |||||||||
Sbjct: 216 ctggcgcaaatcatcagc 199



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                            
Query: 202      ctcggcattgatcatatggaagggattgatggttgcgacagggagcgagtcgccggttgt 261
                |||||||||||| |||||||||||||||||  |   ||||||||| ||||||||  | ||
Sbjct: 35596252 ctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagt 35596193

                                                         
Query: 262      ggtggttctttctggtagcatggagcctggatttaaaaggg 302
                 |||||||| ||||  |||||||||| ||||||| ||||||
Sbjct: 35596192 tgtggttctatctgaaagcatggagcttggatttgaaaggg 35596152



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 492      cacaagggcagctttggcttcagaagcatcacattatgggacgggc 537
                |||| |||||||||||||||||| | |||||||| |||||||||||
Sbjct: 35595376 cacatgggcagctttggcttcagcaacatcacatcatgggacgggc 35595331



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 305      gatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgtttt 363
                ||||| ||||||||||| |||||| || | ||||| || || ||||| |||||||||||
Sbjct: 35596010 gatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgtttt 35595952



to top

>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0452F04
          Length = 171421

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                          
Query: 202    ctcggcattgatcatatggaagggattgatggttgcgacagggagcgagtcgccggttgt 261
              |||||||||||| |||||||||||||||||  |   ||||||||| ||||||||  | ||
Sbjct: 112644 ctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagt 112585

                                                       
Query: 262    ggtggttctttctggtagcatggagcctggatttaaaaggg 302
               |||||||| ||||  |||||||||| ||||||| ||||||
Sbjct: 112584 tgtggttctatctgaaagcatggagcttggatttgaaaggg 112544



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 492    cacaagggcagctttggcttcagaagcatcacattatgggacgggc 537
              |||| |||||||||||||||||| | |||||||| |||||||||||
Sbjct: 111768 cacatgggcagctttggcttcagcaacatcacatcatgggacgggc 111723



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 305    gatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgtttt 363
              ||||| ||||||||||| |||||| || | ||||| || || ||||| |||||||||||
Sbjct: 112402 gatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgtttt 112344



to top

>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence
          Length = 117737

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 454   aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513
             |||||| ||||| | ||| |||||| ||||| |||||||  |||| ||||||||||||||
Sbjct: 53719 aggtgacaataactatggagatgacagacttctgtatgctgaaggacagctttggcttca 53660



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 89/112 (79%)
 Strand = Plus / Minus

                                                                         
Query: 191   atgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagcgag 250
             |||||||| || || || |||||||||||||| |  ||||||  ||  || || ||||| 
Sbjct: 54392 atgattgtcacatctgctttgatcatatggaaagctttgatgtgtgtcactggaagcgaa 54333

                                                                 
Query: 251   tcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggg 302
             || ||||| ||||| ||||| ||||| |||||||| || || ||||| ||||
Sbjct: 54332 tctccggtggtggttgttctctctggaagcatggaacccggttttaagaggg 54281



to top

>ref|NM_112441.3| Arabidopsis thaliana peptidase AT3G15710 mRNA, complete cds
          Length = 872

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231
           ||||||||||| ||||| || |||||||| || ||||||| ||||||
Sbjct: 199 ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 245



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 369 ttgatggccgtgaaattccaattgttca 396
           ||||||| ||||||||||| ||||||||
Sbjct: 383 ttgatggtcgtgaaattcccattgttca 410



to top

>gb|BT015660.1| Arabidopsis thaliana At3g15710 gene, complete cds
          Length = 543

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231
           ||||||||||| ||||| || |||||||| || ||||||| ||||||
Sbjct: 76  ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 122



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 369 ttgatggccgtgaaattccaattgttca 396
           ||||||| ||||||||||| ||||||||
Sbjct: 260 ttgatggtcgtgaaattcccattgttca 287



to top

>gb|BT015149.1| Arabidopsis thaliana At3g15710 gene, complete cds
          Length = 805

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231
           ||||||||||| ||||| || |||||||| || ||||||| ||||||
Sbjct: 159 ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 205



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 369 ttgatggccgtgaaattccaattgttca 396
           ||||||| ||||||||||| ||||||||
Sbjct: 343 ttgatggtcgtgaaattcccattgttca 370



to top

>gb|AY086118.1| Arabidopsis thaliana clone 21563 mRNA, complete sequence
          Length = 820

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231
           ||||||||||| ||||| || |||||||| || ||||||| ||||||
Sbjct: 199 ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 245



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 369 ttgatggccgtgaaattccaattgttca 396
           ||||||| ||||||||||| ||||||||
Sbjct: 383 ttgatggtcgtgaaattcccattgttca 410



to top

>ref|XM_512154.1| PREDICTED: Pan troglodytes similar to microsomal signal peptidase
           subunit (LOC455447), mRNA
          Length = 451

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404
           |||| |||||||||||||||||  |||| || || || |||||||| |||||| | || |
Sbjct: 364 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 423

                         
Query: 405 ttaaggttcatgaa 418
           | || |||||||||
Sbjct: 424 tcaaagttcatgaa 437



to top

>ref|NM_033280.1| Homo sapiens SEC11-like 3 (S. cerevisiae) (SEC11L3), mRNA
          Length = 794

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404
           |||| |||||||||||||||||  |||| || || || |||||||| |||||| | || |
Sbjct: 329 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 388

                         
Query: 405 ttaaggttcatgaa 418
           | || |||||||||
Sbjct: 389 tcaaagttcatgaa 402



to top

>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence
          Length = 93126

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 191 atgattgttacctcggcattgatcatatggaagggattgatg 232
           ||||||||||| || ||| |||| |||||||||| |||||||
Sbjct: 793 atgattgttacgtctgcactgataatatggaaggcattgatg 752



to top

>emb|CR858452.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0613 (from clone DKFZp469M0613)
          Length = 864

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404
           |||| |||||||||||||||||  |||| || || || |||||||| |||||| | || |
Sbjct: 319 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 378

                         
Query: 405 ttaaggttcatgaa 418
           | || |||||||||
Sbjct: 379 tcaaagttcatgaa 392



to top

>gb|AC099842.2| Homo sapiens chromosome 11, clone RP11-747E23, complete sequence
          Length = 159274

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 495    aagggcagctttggcttcagaa 516
              ||||||||||||||||||||||
Sbjct: 151875 aagggcagctttggcttcagaa 151854



to top

>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence
          Length = 160748

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                          
Query: 345    ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404
              |||| |||||||||||||||||  |||| || || || |||||||| |||||| | || |
Sbjct: 103571 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 103630

                            
Query: 405    ttaaggttcatgaa 418
              | || |||||||||
Sbjct: 103631 tcaaagttcatgaa 103644



to top

>gb|AC100768.2| Homo sapiens chromosome 11, clone RP11-945A11, complete sequence
          Length = 190183

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 495    aagggcagctttggcttcagaa 516
              ||||||||||||||||||||||
Sbjct: 185851 aagggcagctttggcttcagaa 185872



to top

>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence
          Length = 195609

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                         
Query: 345   ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404
             |||| |||||||||||||||||  |||| || || || |||||||| |||||| | || |
Sbjct: 18407 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 18466

                           
Query: 405   ttaaggttcatgaa 418
             | || |||||||||
Sbjct: 18467 tcaaagttcatgaa 18480



to top

>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete
             sequence
          Length = 113539

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 191   atgattgttacctcggcattgatcatatggaagggattgatg 232
             ||||||||||| || ||| |||| |||||||||| |||||||
Sbjct: 34082 atgattgttacgtctgcactgataatatggaaggcattgatg 34041



to top

>gb|AF212233.1|AF212233 Homo sapiens microsomal signal peptidase subunit mRNA, complete cds
          Length = 794

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404
           |||| |||||||||||||||||  |||| || || || |||||||| |||||| | || |
Sbjct: 329 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 388

                         
Query: 405 ttaaggttcatgaa 418
           | || |||||||||
Sbjct: 389 tcaaagttcatgaa 402



to top

>gb|BC009703.1| Homo sapiens SEC11-like 3 (S. cerevisiae), mRNA (cDNA clone
           MGC:9299 IMAGE:3895819), complete cds
          Length = 782

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404
           |||| |||||||||||||||||  |||| || || || |||||||| |||||| | || |
Sbjct: 316 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 375

                         
Query: 405 ttaaggttcatgaa 418
           | || |||||||||
Sbjct: 376 tcaaagttcatgaa 389



to top

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 346     tggagaaatagttgtttttaatattgatg 374
               |||| |||||||||||||| |||||||||
Sbjct: 1225118 tggaaaaatagttgtttttgatattgatg 1225090



to top

>emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              4/6
          Length = 282183

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 346    tggagaaatagttgtttttaatattgatg 374
              |||| |||||||||||||| |||||||||
Sbjct: 164232 tggaaaaatagttgtttttgatattgatg 164204



to top

>emb|AJ000744.1|CJAJ744 Campylobacter jejuni gmk gene, partial
          Length = 300

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 346 tggagaaatagttgtttttaatattgatg 374
           |||| |||||||||||||| |||||||||
Sbjct: 208 tggaaaaatagttgtttttgatattgatg 236



to top

>gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, complete sequence
          Length = 190712

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   ccaagaaagtggagaagttga 441
             |||||||||||||||||||||
Sbjct: 42348 ccaagaaagtggagaagttga 42368



to top

>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence
          Length = 135209

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 98     atccccgccgagatggggttcatcg 122
              |||||||||||||||||| ||||||
Sbjct: 133184 atccccgccgagatggggctcatcg 133208



to top

>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5
          Length = 89779

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 356   gttgtttttaatattgatggc 376
             |||||||||||||||||||||
Sbjct: 40989 gttgtttttaatattgatggc 41009



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 145     gtcgatgcaggtccgccaggtcctc 169
               |||| ||||||||||||||||||||
Sbjct: 3492653 gtcgttgcaggtccgccaggtcctc 3492677



to top

>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   atggagcctggatttaaaag 300
             ||||||||||||||||||||
Sbjct: 25889 atggagcctggatttaaaag 25908



to top

>gb|DQ008592.1| Escherichia coli serogroup O174 O antigen gene cluster, partial
            sequence
          Length = 5660

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 346  tggagaaatagttgtttttaatat 369
            |||||||||||||| |||||||||
Sbjct: 3277 tggagaaatagttgattttaatat 3254



to top

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 95     gagatccccgccgagatggggttcatcg 122
              |||||| |||||||||||| ||||||||
Sbjct: 511404 gagatcaccgccgagatggcgttcatcg 511377



to top

>ref|XM_955118.1| Neurospora crassa OR74A hypothetical protein (NCU05650.1) partial
           mRNA
          Length = 3285

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 tgcaggtccgccaggtcctc 169
           ||||||||||||||||||||
Sbjct: 236 tgcaggtccgccaggtcctc 255



to top

>ref|XM_325504.1| Neurospora crassa OR74A hypothetical protein (NCU05650.1) partial
           mRNA
          Length = 3285

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 tgcaggtccgccaggtcctc 169
           ||||||||||||||||||||
Sbjct: 236 tgcaggtccgccaggtcctc 255



to top

>gb|AC024812.2| Caenorhabditis elegans cosmid Y54E10BR, complete sequence
          Length = 54475

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 203   tcggcattgatcatatggaagggattgatggt 234
             ||||||||||| || ||||||||| |||||||
Sbjct: 15301 tcggcattgatgatctggaagggaatgatggt 15270



to top

>emb|AL354831.18| Human DNA sequence from clone RP11-188A23 on chromosome 13 Contains a
             novel gene and a CpG island, complete sequence
          Length = 144586

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ggagaaatagttgtttttaa 366
             ||||||||||||||||||||
Sbjct: 95691 ggagaaatagttgtttttaa 95672



to top

>gb|AC131886.5| Rattus norvegicus 4 BAC CH230-53A1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 222634

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    caagggcagctttggcttca 513
              ||||||||||||||||||||
Sbjct: 154004 caagggcagctttggcttca 153985



to top

>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    aaatagttgtttttaatatt 370
              ||||||||||||||||||||
Sbjct: 140657 aaatagttgtttttaatatt 140676



to top

>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 95     gagatccccgccgagatggggttcatcg 122
              |||||| |||||||||||| ||||||||
Sbjct: 168048 gagatcaccgccgagatggcgttcatcg 168021



to top

>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14
          Length = 324050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 95     gagatccccgccgagatggggttcatcg 122
              |||||| |||||||||||| ||||||||
Sbjct: 167974 gagatcaccgccgagatggcgttcatcg 167947



to top

>emb|BX927395.18| Zebrafish DNA sequence from clone CH211-72A16 in linkage group 3,
             complete sequence
          Length = 152987

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   aaaggtgataataattttgg 471
             ||||||||||||||||||||
Sbjct: 98808 aaaggtgataataattttgg 98789



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 148     gatgcaggtccgccaggtcc 167
               ||||||||||||||||||||
Sbjct: 6534014 gatgcaggtccgccaggtcc 6534033



to top

>gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 195430

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 293   tttaaaaggggtgatattctgttt 316
             ||||||||| ||||||||||||||
Sbjct: 26880 tttaaaaggagtgatattctgttt 26903



to top

>ref|NM_058691.3| Caenorhabditis elegans Y54E10BR.5 (Y54E10BR.5) mRNA, complete cds
          Length = 701

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 203 tcggcattgatcatatggaagggattgatggt 234
           ||||||||||| || ||||||||| |||||||
Sbjct: 100 tcggcattgatgatctggaagggaatgatggt 131



to top

>emb|BX826032.1|CNS0A69G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL80ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 855

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 369 ttgatggccgtgaaattccaattgttca 396
           ||||||| ||||||||||| ||||||||
Sbjct: 366 ttgatggtcgtgaaattcccattgttca 393



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagg 224
           ||||||||||| ||||| || |||||||| || |||||||
Sbjct: 182 ctcggtatgatcgttacatctgcattgataatttggaagg 221



to top

>emb|BX548006.10| Zebrafish DNA sequence from clone DKEY-127P11, complete sequence
          Length = 158134

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tgatattctgtttttgcaca 323
             ||||||||||||||||||||
Sbjct: 11213 tgatattctgtttttgcaca 11194



to top

>emb|BX927116.18| Zebrafish DNA sequence from clone DKEY-261D11 in linkage group 22,
             complete sequence
          Length = 155808

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tgatattctgtttttgcaca 323
             ||||||||||||||||||||
Sbjct: 77477 tgatattctgtttttgcaca 77458



to top

>emb|AL929274.7| Zebrafish DNA sequence from clone CH211-79M20 in linkage group 22,
             complete sequence
          Length = 169459

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tgatattctgtttttgcaca 323
             ||||||||||||||||||||
Sbjct: 42066 tgatattctgtttttgcaca 42047



to top

>gb|AC119259.15| Mus musculus chromosome 18, clone RP24-285N19, complete sequence
          Length = 169310

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    atggagcctggatttaaaag 300
              ||||||||||||||||||||
Sbjct: 159651 atggagcctggatttaaaag 159670



to top

>gb|AD000014.1|MSGY423 Mycobacterium tuberculosis sequence from clone y423
          Length = 42741

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 95    gagatccccgccgagatggggttcatcg 122
             |||||| |||||||||||| ||||||||
Sbjct: 41730 gagatcaccgccgagatggcgttcatcg 41757



to top

>gb|AC118263.8| Mus musculus chromosome 1, clone RP24-502N12, complete sequence
          Length = 203126

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 352   aatagttgtttttaatattgatgg 375
             ||||| ||||||||||||||||||
Sbjct: 76322 aatagctgtttttaatattgatgg 76345


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,267,354
Number of Sequences: 3902068
Number of extensions: 5267354
Number of successful extensions: 96418
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96093
Number of HSP's gapped (non-prelim): 313
length of query: 562
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 539
effective length of database: 17,143,297,704
effective search space: 9240237462456
effective search space used: 9240237462456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top