Clone Name | basd3o14 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK071238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085B09, full insert sequence Length = 1035 Score = 555 bits (280), Expect = e-155 Identities = 409/452 (90%) Strand = Plus / Plus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 |||||||| ||||||||||| ||||||||||||||| ||||| ||| ||||||| ||| Sbjct: 89 gagatgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtc 148 Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226 ||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 149 ctcgcgcaaatcatcagcctcggtatgattgttacctcggcactgatcatatggaaggga 208 Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286 ||||||||||| || ||||||||||| || || || ||||| |||||||||||||||||| Sbjct: 209 ttgatggttgcaacggggagcgagtccccagtggttgtggtcctttctggtagcatggag 268 Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346 ||||||||||||||||| ||||| || ||| | ||||||||| |||||||||||||||| Sbjct: 269 cctggatttaaaaggggcgatatcctttttctacacatgagcaaagatcctatccgcaca 328 Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ggagagatagttgttttcaacattgatggccgtgaaattccaattgttcaccgtgtgatt 388 Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466 ||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 389 aaggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggtgataataat 448 Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526 |||||||| ||||| ||| | |||||||| ||||||||||||||||| | ||||||||| Sbjct: 449 tttggggacgaccgtcttctttatgcacatgggcagctttggcttcaccaacatcacatt 508 Query: 527 atgggacgggctgtaggctatctaccatatgt 558 ||||||||||||||||||| ||| |||||||| Sbjct: 509 atgggacgggctgtaggctttcttccatatgt 540
>dbj|AK111407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E09, full insert sequence Length = 1517 Score = 513 bits (259), Expect = e-142 Identities = 406/455 (89%) Strand = Plus / Plus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 ||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| Sbjct: 243 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 302 Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226 || |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 303 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 362 Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286 || || |||| ||||| || || || || || |||||||||||||||||||||||||| Sbjct: 363 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 422 Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346 |||||||||||||| ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 423 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 482 Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 483 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 542 Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466 ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| ||| Sbjct: 543 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 602 Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526 |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 603 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 662 Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561 ||||| || ||||| || | ||| ||||||||||| Sbjct: 663 atggggcgagctgttggttttctgccatatgttgg 697
>dbj|AK106215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H01, full insert sequence Length = 1063 Score = 513 bits (259), Expect = e-142 Identities = 406/455 (89%) Strand = Plus / Plus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 ||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| Sbjct: 232 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 291 Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226 || |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 292 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 351 Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286 || || |||| ||||| || || || || || |||||||||||||||||||||||||| Sbjct: 352 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 411 Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346 |||||||||||||| ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 412 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 471 Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 472 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 531 Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466 ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| ||| Sbjct: 532 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 591 Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526 |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 592 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 651 Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561 ||||| || ||||| || | ||| ||||||||||| Sbjct: 652 atggggcgagctgttggttttctgccatatgttgg 686
>dbj|AK102635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099N11, full insert sequence Length = 1065 Score = 513 bits (259), Expect = e-142 Identities = 406/455 (89%) Strand = Plus / Plus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 ||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| Sbjct: 234 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 293 Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226 || |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 294 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 353 Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286 || || |||| ||||| || || || || || |||||||||||||||||||||||||| Sbjct: 354 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 413 Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346 |||||||||||||| ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 414 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 473 Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 474 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 533 Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466 ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| ||| Sbjct: 534 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 593 Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526 |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 594 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 653 Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561 ||||| || ||||| || | ||| ||||||||||| Sbjct: 654 atggggcgagctgttggttttctgccatatgttgg 688
>dbj|AK058911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G10, full insert sequence Length = 1083 Score = 513 bits (259), Expect = e-142 Identities = 406/455 (89%) Strand = Plus / Plus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 ||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| Sbjct: 265 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 324 Query: 167 ctcacgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaaggga 226 || |||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 325 ctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggt 384 Query: 227 ttgatggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggag 286 || || |||| ||||| || || || || || |||||||||||||||||||||||||| Sbjct: 385 ttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaa 444 Query: 287 cctggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcact 346 |||||||||||||| ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 445 cctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcact 504 Query: 347 ggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgatt 406 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 505 ggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatc 564 Query: 407 aaggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataat 466 ||||||||||||||||| || |||| ||||||||| |||||||| ||||||||||| ||| Sbjct: 565 aaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaat 624 Query: 467 tttggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacatt 526 |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||| ||| Sbjct: 625 tttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatatt 684 Query: 527 atgggacgggctgtaggctatctaccatatgttgg 561 ||||| || ||||| || | ||| ||||||||||| Sbjct: 685 atggggcgagctgttggttttctgccatatgttgg 719
>gb|AY103758.1| Zea mays PCO086041 mRNA sequence Length = 1028 Score = 444 bits (224), Expect = e-121 Identities = 395/452 (87%) Strand = Plus / Plus Query: 110 atggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtcctc 169 ||||||||| |||| ||| | ||||||||||||| || |||||| ||||||| || ||| Sbjct: 149 atggggttcgtcggagacacgatggagtcgatccgctccatgcagatccgccaagtgctc 208 Query: 170 acgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaagggattg 229 | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 209 atgcagatcatcagcctcggtatgattgttacctctgcattaatcatatggaagggtttg 268 Query: 230 atggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcct 289 || ||| || ||||||||||| || ||||| ||||| || || ||||||||||||||| Sbjct: 269 atagttttcacggggagcgagtcaccagttgtagtggtgctctcgggtagcatggagcct 328 Query: 290 ggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcactgga 349 |||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||| Sbjct: 329 ggatttaaaaggggtgatatcctgtttttgcatatgagcaaagatcctattcgcacagga 388 Query: 350 gaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaag 409 |||||||||||||| ||| | ||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 389 gaaatagttgttttcaatgtcgatggtcgtgagattccaattgttcaccgagtgattaag 448 Query: 410 gttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataatttt 469 || |||||||| || || | || |||||| || |||||||| |||||||| ||||||||| Sbjct: 449 gtccatgaacgtcaggacactgcagaagtggacatcctcaccaaaggtgacaataatttt 508 Query: 470 ggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacattatg 529 |||||||||||||| || |||||||| |||||||||||||| ||| | |||||||||||| Sbjct: 509 ggggatgaccgactattatatgcacatgggcagctttggctccagcaacatcacattatg 568 Query: 530 ggacgggctgtaggctatctaccatatgttgg 561 ||||| || || ||||| || ||||||||||| Sbjct: 569 ggacgtgcggtgggctaccttccatatgttgg 600
>gb|BT018041.1| Zea mays clone EL01N0531A03.c mRNA sequence Length = 869 Score = 420 bits (212), Expect = e-114 Identities = 392/452 (86%) Strand = Plus / Plus Query: 110 atggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtcctc 169 ||||||||| |||| ||| | ||||||||||||| || |||||| ||||||| || ||| Sbjct: 116 atggggttcgtcggagacacgatggagtcgatccgctccatgcagatccgccaagtgctc 175 Query: 170 acgcagatcatcagcctcggtatgattgttacctcggcattgatcatatggaagggattg 229 | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 176 atgcagatcatcagcctcggtatgattgttacctctgcattaatcatatggaagggtttg 235 Query: 230 atggttgcgacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcct 289 || ||| | ||||||||||| || ||||| ||||| || || ||||||||||||||| Sbjct: 236 atagttttcgcggggagcgagtcaccagttgtagtggtgctctcgggtagcatggagcct 295 Query: 290 ggatttaaaaggggtgatattctgtttttgcacatgagccaagatcctatccgcactgga 349 |||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||| Sbjct: 296 ggatttaaaaggggtgatatcctgtttttgcatatgagcaaagatcctattcgcacagga 355 Query: 350 gaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaag 409 |||||||||||||| ||| | ||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 356 gaaatagttgttttcaatgtcgatggtcgtgagattccaattgttcaccgagtgattaag 415 Query: 410 gttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggtgataataatttt 469 || |||||||| || || | || |||||| || |||||||| |||||||| ||||||||| Sbjct: 416 gtccatgaacgtcaggacactgcagaagtggacatcctcaccaaaggtgacaataatttt 475 Query: 470 ggggatgaccgacttttgtatgcacaagggcagctttggcttcagaagcatcacattatg 529 |||||||||||||| || |||||||| || ||||||||||| ||| | || ||||||||| Sbjct: 476 ggggatgaccgactattatatgcacatggccagctttggctccagcaacaccacattatg 535 Query: 530 ggacgggctgtaggctatctaccatatgttgg 561 ||||| || || ||||| || ||||||||||| Sbjct: 536 ggacgtgcggtgggctaccttccatatgttgg 567
>ref|NM_185778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 337 bits (170), Expect = 2e-89 Identities = 245/270 (90%) Strand = Plus / Plus Query: 188 ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247 ||||||||||||||||| |||||||||||||||||||| || || |||| ||||| || Sbjct: 133 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 192 Query: 248 gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggggtgat 307 || || || || |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 193 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgac 252 Query: 308 attctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgtttttaat 367 || |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 253 atcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaat 312 Query: 368 attgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaagaa 427 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 313 gttgatggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggag 372 Query: 428 agtggagaagttgatatcctcacgaaaggt 457 |||| ||||||||| |||||||| |||||| Sbjct: 373 agtgcagaagttgacatcctcacaaaaggt 402 Score = 117 bits (59), Expect = 4e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 455 ggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttcag 514 |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 454 ggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttcag 513 Query: 515 aagcatcacattatgggacgggctgtaggctatctaccatatgttgg 561 | ||||| |||||||| || ||||| || | ||| ||||||||||| Sbjct: 514 caacatcatattatggggcgagctgttggttttctgccatatgttgg 560 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 110 atggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtcctc 169 |||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| || Sbjct: 1 atggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtgctg 60 Query: 170 acgcagatcatcagc 184 |||| ||||||||| Sbjct: 61 gcgcaaatcatcagc 75
>dbj|AK099911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D13, full insert sequence Length = 1489 Score = 168 bits (85), Expect = 1e-38 Identities = 285/351 (81%), Gaps = 3/351 (0%) Strand = Plus / Plus Query: 202 ctcggcattgatcatatggaagggattgatggttgcgacagggagcgagtcgccggttgt 261 |||||||||||| ||||||||||||||||| | ||||||||| |||||||| | || Sbjct: 163 ctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagt 222 Query: 262 ggtggttctttctggtagcatggagcctggatttaaaaggggtgatattctgtttttgca 321 |||||||| |||| ||||||| || ||||||| ||||||| ||||| ||||||||||| Sbjct: 223 tgtggttctatctgaaagcatggggcttggatttgaaaggggggatatcctgtttttgca 282 Query: 322 catgagccaagatcctatccgcactggagaaatagttgtttttaatattgatggccgtga 381 |||||| || | ||||| || || ||||| ||||||||||| || |||||||||||| Sbjct: 283 aatgagcaaacaccctatacgaacaggagatatagttgttttcaa---tgatggccgtga 339 Query: 382 aattccaattgttcaccgtgtgattaaggttcatgaacgccaagaaagtggagaagttga 441 ||||||||| || || || || ||| ||||||| ||||| | || | || | ||||||| Sbjct: 340 aattccaatcgtccatcgcgttattgaggttcacgaacgacgggataatgcacaagttga 399 Query: 442 tatcctcacgaaaggtgataataattttggggatgaccgacttttgtatgcacaagggca 501 | ||||||| |||||||| || ||| | ||| |||||| || | || |||| ||||| Sbjct: 400 tttcctcacaaaaggtgacaacaatcctatggacgaccgaattctttacacacatgggca 459 Query: 502 gctttggcttcagaagcatcacattatgggacgggctgtaggctatctacc 552 ||||||||||||| | |||||||| ||||||||||| |||| |||||||| Sbjct: 460 gctttggcttcagcaacatcacatcatgggacgggccatagggtatctacc 510
>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0082F22, complete sequence Length = 176038 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Plus Query: 188 ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247 ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||| Sbjct: 112480 ggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagc 112539 Query: 248 gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggg 302 ||||| || || || ||||| |||||||||||||||||||||||||||||||||| Sbjct: 112540 gagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggg 112594 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 454 aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513 ||||||||||||||||||||| ||||| ||| | |||||||| ||||||||||||||||| Sbjct: 114516 aggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttca 114575 Query: 514 gaagcatcacattatgggacgggctgtagg 543 | |||||||||||||||||||||||||| Sbjct: 114576 ccaacatcacattatgggacgggctgtagg 114605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 |||||||| ||||||||||| ||||||||||||||| ||||| ||| ||||||| ||| Sbjct: 111806 gagatgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtc 111865 Query: 167 ctcacgcagatcatcagcctcggt 190 ||| |||| ||||||||||||||| Sbjct: 111866 ctcgcgcaaatcatcagcctcggt 111889 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 374 ggccgtgaaattccaattgttcaccgtgtgattaaggt 411 |||||||||||||||||||||||||||||||||||||| Sbjct: 114174 ggccgtgaaattccaattgttcaccgtgtgattaaggt 114211 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 320 cacatgagccaagatcctatccgcactggagaaatagttgtttttaatattgatg 374 ||||||||| |||||||||||||||| ||||| ||||||||||| || ||||||| Sbjct: 113982 cacatgagcaaagatcctatccgcacaggagagatagttgttttcaacattgatg 114036 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457 |||| ||||||||| | ||||||| |||||||||||||||||||||||| Sbjct: 114327 aggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggt 114376
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Plus Query: 188 ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247 ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||| Sbjct: 13149703 ggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagc 13149762 Query: 248 gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggg 302 ||||| || || || ||||| |||||||||||||||||||||||||||||||||| Sbjct: 13149763 gagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggg 13149817 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 454 aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513 ||||||||||||||||||||| ||||| ||| | |||||||| ||||||||||||||||| Sbjct: 13151739 aggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttca 13151798 Query: 514 gaagcatcacattatgggacgggctgtagg 543 | |||||||||||||||||||||||||| Sbjct: 13151799 ccaacatcacattatgggacgggctgtagg 13151828 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 |||||||| ||||||||||| ||||||||||||||| ||||| ||| ||||||| ||| Sbjct: 13149029 gagatgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtc 13149088 Query: 167 ctcacgcagatcatcagcctcggt 190 ||| |||| ||||||||||||||| Sbjct: 13149089 ctcgcgcaaatcatcagcctcggt 13149112 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 374 ggccgtgaaattccaattgttcaccgtgtgattaaggt 411 |||||||||||||||||||||||||||||||||||||| Sbjct: 13151397 ggccgtgaaattccaattgttcaccgtgtgattaaggt 13151434 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 320 cacatgagccaagatcctatccgcactggagaaatagttgtttttaatattgatg 374 ||||||||| |||||||||||||||| ||||| ||||||||||| || ||||||| Sbjct: 13151205 cacatgagcaaagatcctatccgcacaggagagatagttgttttcaacattgatg 13151259 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 408 aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457 |||| ||||||||| | ||||||| |||||||||||||||||||||||| Sbjct: 13151550 aggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggt 13151599
>ref|NM_104138.2| Arabidopsis thaliana peptidase AT1G52600 mRNA, complete cds Length = 818 Score = 127 bits (64), Expect = 4e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 156 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 215 Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297 || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 216 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 275 Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357 ||||| ||||| |||| ||||||||||| |||| || || || | || ||||| || Sbjct: 276 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 335 Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417 |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct: 336 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 395 Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477 | | || | | |||||||||||| | || ||||||||||| ||||| | ||| ||||| Sbjct: 396 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 455 Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513 | ||||| ||||||| |||| |||||||||||||| Sbjct: 456 cagacttctgtatgctgaaggacagctttggcttca 491
>gb|AY096703.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600) mRNA, complete cds Length = 574 Score = 127 bits (64), Expect = 4e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 69 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 128 Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297 || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 129 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 188 Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357 ||||| ||||| |||| ||||||||||| |||| || || || | || ||||| || Sbjct: 189 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 248 Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417 |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct: 249 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 308 Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477 | | || | | |||||||||||| | || ||||||||||| ||||| | ||| ||||| Sbjct: 309 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 368 Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513 | ||||| ||||||| |||| |||||||||||||| Sbjct: 369 cagacttctgtatgctgaaggacagctttggcttca 404
>gb|AY064032.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600) mRNA, complete cds Length = 825 Score = 127 bits (64), Expect = 4e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214 Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297 || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274 Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357 ||||| ||||| |||| ||||||||||| |||| || || || | || ||||| || Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 334 Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417 |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 394 Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477 | | || | | |||||||||||| | || ||||||||||| ||||| | ||| ||||| Sbjct: 395 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 454 Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513 | ||||| ||||||| |||| |||||||||||||| Sbjct: 455 cagacttctgtatgctgaaggacagctttggcttca 490
>gb|AY084305.1| Arabidopsis thaliana clone 103157 mRNA, complete sequence Length = 691 Score = 127 bits (64), Expect = 4e-26 Identities = 268/336 (79%) Strand = Plus / Plus Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214 Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297 || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274 Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357 ||||| ||||| |||| ||||||||||| |||| || || || | || ||||| || Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 334 Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417 |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 394 Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477 | | || | | |||||||||||| | || ||||||||||| ||||| | ||| ||||| Sbjct: 395 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 454 Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513 | ||||| ||||||| |||| |||||||||||||| Sbjct: 455 cagacttctgtatgctgaaggacagctttggcttca 490
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 188 ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247 ||||||||||||||||| |||||||||||||||||||| || || |||| ||||| || Sbjct: 9270059 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 9270000 Query: 248 gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaag 300 || || || || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 9269999 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaag 9269947 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 454 aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513 ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 9269009 aggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttca 9268950 Query: 514 gaagcatcacattatgggacgggctgt 540 | | ||||| |||||||| || ||||| Sbjct: 9268949 gcaacatcatattatggggcgagctgt 9268923 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 301 gggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgt 360 |||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 9269510 gggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgt 9269451 Query: 361 ttttaatattgatg 374 ||||||| |||||| Sbjct: 9269450 ttttaatgttgatg 9269437 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 ||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| Sbjct: 9271866 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 9271807 Query: 167 ctcacgcagatcatcagc 184 || |||| ||||||||| Sbjct: 9271806 ctggcgcaaatcatcagc 9271789 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 374 ggccgtgaaattccaattgttcaccgtgtgattaaggt 411 |||||||||||||||||||||||||||||||| ||||| Sbjct: 9269339 ggccgtgaaattccaattgttcaccgtgtgatcaaggt 9269302 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457 |||||||||||||||| || |||| ||||||||| |||||||| |||||| Sbjct: 9269209 aggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggt 9269160
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 188 ggtatgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagc 247 ||||||||||||||||| |||||||||||||||||||| || || |||| ||||| || Sbjct: 37400 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 37341 Query: 248 gagtcgccggttgtggtggttctttctggtagcatggagcctggatttaaaag 300 || || || || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 37340 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaag 37288 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 454 aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513 ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 36350 aggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttca 36291 Query: 514 gaagcatcacattatgggacgggctgt 540 | | ||||| |||||||| || ||||| Sbjct: 36290 gcaacatcatattatggggcgagctgt 36264 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 301 gggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgt 360 |||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 36851 gggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgt 36792 Query: 361 ttttaatattgatg 374 ||||||| |||||| Sbjct: 36791 ttttaatgttgatg 36778 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 ||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| Sbjct: 39207 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 39148 Query: 167 ctcacgcagatcatcagc 184 || |||| ||||||||| Sbjct: 39147 ctggcgcaaatcatcagc 39130 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 374 ggccgtgaaattccaattgttcaccgtgtgattaaggt 411 |||||||||||||||||||||||||||||||| ||||| Sbjct: 36680 ggccgtgaaattccaattgttcaccgtgtgatcaaggt 36643 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 408 aggttcatgaacgccaagaaagtggagaagttgatatcctcacgaaaggt 457 |||||||||||||||| || |||| ||||||||| |||||||| |||||| Sbjct: 36550 aggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggt 36501
>dbj|AK220581.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-87-D04 Length = 783 Score = 119 bits (60), Expect = 1e-23 Identities = 267/336 (79%) Strand = Plus / Plus Query: 178 catcagcctcggtatgattgttacctcggcattgatcatatggaagggattgatggttgc 237 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214 Query: 238 gacagggagcgagtcgccggttgtggtggttctttctggtagcatggagcctggatttaa 297 || || ||||| || ||||| ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274 Query: 298 aaggggtgatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagt 357 ||||| ||||| |||| ||||||||||| |||| || | || | || ||||| || Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccggttcgagcaggtgaaattgt 334 Query: 358 tgtttttaatattgatggccgtgaaattccaattgttcaccgtgtgattaaggttcatga 417 |||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttcacga 394 Query: 418 acgccaagaaagtggagaagttgatatcctcacgaaaggtgataataattttggggatga 477 | | || | | |||||||||||| | || ||||||||||| ||||| | ||| ||||| Sbjct: 395 aagggaaaatacaggagaagttgatgttctaacgaaaggtgacaataactatggagatga 454 Query: 478 ccgacttttgtatgcacaagggcagctttggcttca 513 | ||||| ||||||| |||| |||||||||||||| Sbjct: 455 cagacttctgtatgctgaaggacagctttggcttca 490
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 107 gagatggggttcatcggcgaccaggtggagtcgatccggtcgatgcaggtccgccaggtc 166 ||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||||| Sbjct: 276 gagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtg 217 Query: 167 ctcacgcagatcatcagc 184 || |||| ||||||||| Sbjct: 216 ctggcgcaaatcatcagc 199
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 202 ctcggcattgatcatatggaagggattgatggttgcgacagggagcgagtcgccggttgt 261 |||||||||||| ||||||||||||||||| | ||||||||| |||||||| | || Sbjct: 35596252 ctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagt 35596193 Query: 262 ggtggttctttctggtagcatggagcctggatttaaaaggg 302 |||||||| |||| |||||||||| ||||||| |||||| Sbjct: 35596192 tgtggttctatctgaaagcatggagcttggatttgaaaggg 35596152 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 492 cacaagggcagctttggcttcagaagcatcacattatgggacgggc 537 |||| |||||||||||||||||| | |||||||| ||||||||||| Sbjct: 35595376 cacatgggcagctttggcttcagcaacatcacatcatgggacgggc 35595331 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 305 gatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgtttt 363 ||||| ||||||||||| |||||| || | ||||| || || ||||| ||||||||||| Sbjct: 35596010 gatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgtttt 35595952
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 202 ctcggcattgatcatatggaagggattgatggttgcgacagggagcgagtcgccggttgt 261 |||||||||||| ||||||||||||||||| | ||||||||| |||||||| | || Sbjct: 112644 ctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagt 112585 Query: 262 ggtggttctttctggtagcatggagcctggatttaaaaggg 302 |||||||| |||| |||||||||| ||||||| |||||| Sbjct: 112584 tgtggttctatctgaaagcatggagcttggatttgaaaggg 112544 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 492 cacaagggcagctttggcttcagaagcatcacattatgggacgggc 537 |||| |||||||||||||||||| | |||||||| ||||||||||| Sbjct: 111768 cacatgggcagctttggcttcagcaacatcacatcatgggacgggc 111723 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 305 gatattctgtttttgcacatgagccaagatcctatccgcactggagaaatagttgtttt 363 ||||| ||||||||||| |||||| || | ||||| || || ||||| ||||||||||| Sbjct: 112402 gatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgtttt 112344
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence Length = 117737 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 454 aggtgataataattttggggatgaccgacttttgtatgcacaagggcagctttggcttca 513 |||||| ||||| | ||| |||||| ||||| ||||||| |||| |||||||||||||| Sbjct: 53719 aggtgacaataactatggagatgacagacttctgtatgctgaaggacagctttggcttca 53660 Score = 40.1 bits (20), Expect = 7.6 Identities = 89/112 (79%) Strand = Plus / Minus Query: 191 atgattgttacctcggcattgatcatatggaagggattgatggttgcgacagggagcgag 250 |||||||| || || || |||||||||||||| | |||||| || || || ||||| Sbjct: 54392 atgattgtcacatctgctttgatcatatggaaagctttgatgtgtgtcactggaagcgaa 54333 Query: 251 tcgccggttgtggtggttctttctggtagcatggagcctggatttaaaaggg 302 || ||||| ||||| ||||| ||||| |||||||| || || ||||| |||| Sbjct: 54332 tctccggtggtggttgttctctctggaagcatggaacccggttttaagaggg 54281
>ref|NM_112441.3| Arabidopsis thaliana peptidase AT3G15710 mRNA, complete cds Length = 872 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231 ||||||||||| ||||| || |||||||| || ||||||| |||||| Sbjct: 199 ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 245 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 369 ttgatggccgtgaaattccaattgttca 396 ||||||| ||||||||||| |||||||| Sbjct: 383 ttgatggtcgtgaaattcccattgttca 410
>gb|BT015660.1| Arabidopsis thaliana At3g15710 gene, complete cds Length = 543 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231 ||||||||||| ||||| || |||||||| || ||||||| |||||| Sbjct: 76 ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 122 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 369 ttgatggccgtgaaattccaattgttca 396 ||||||| ||||||||||| |||||||| Sbjct: 260 ttgatggtcgtgaaattcccattgttca 287
>gb|BT015149.1| Arabidopsis thaliana At3g15710 gene, complete cds Length = 805 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231 ||||||||||| ||||| || |||||||| || ||||||| |||||| Sbjct: 159 ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 205 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 369 ttgatggccgtgaaattccaattgttca 396 ||||||| ||||||||||| |||||||| Sbjct: 343 ttgatggtcgtgaaattcccattgttca 370
>gb|AY086118.1| Arabidopsis thaliana clone 21563 mRNA, complete sequence Length = 820 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagggattgat 231 ||||||||||| ||||| || |||||||| || ||||||| |||||| Sbjct: 199 ctcggtatgatcgttacatctgcattgataatttggaaggcattgat 245 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 369 ttgatggccgtgaaattccaattgttca 396 ||||||| ||||||||||| |||||||| Sbjct: 383 ttgatggtcgtgaaattcccattgttca 410
>ref|XM_512154.1| PREDICTED: Pan troglodytes similar to microsomal signal peptidase subunit (LOC455447), mRNA Length = 451 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404 |||| ||||||||||||||||| |||| || || || |||||||| |||||| | || | Sbjct: 364 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 423 Query: 405 ttaaggttcatgaa 418 | || ||||||||| Sbjct: 424 tcaaagttcatgaa 437
>ref|NM_033280.1| Homo sapiens SEC11-like 3 (S. cerevisiae) (SEC11L3), mRNA Length = 794 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404 |||| ||||||||||||||||| |||| || || || |||||||| |||||| | || | Sbjct: 329 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 388 Query: 405 ttaaggttcatgaa 418 | || ||||||||| Sbjct: 389 tcaaagttcatgaa 402
>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence Length = 93126 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 191 atgattgttacctcggcattgatcatatggaagggattgatg 232 ||||||||||| || ||| |||| |||||||||| ||||||| Sbjct: 793 atgattgttacgtctgcactgataatatggaaggcattgatg 752
>emb|CR858452.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0613 (from clone DKFZp469M0613) Length = 864 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404 |||| ||||||||||||||||| |||| || || || |||||||| |||||| | || | Sbjct: 319 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 378 Query: 405 ttaaggttcatgaa 418 | || ||||||||| Sbjct: 379 tcaaagttcatgaa 392
>gb|AC099842.2| Homo sapiens chromosome 11, clone RP11-747E23, complete sequence Length = 159274 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 495 aagggcagctttggcttcagaa 516 |||||||||||||||||||||| Sbjct: 151875 aagggcagctttggcttcagaa 151854
>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence Length = 160748 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404 |||| ||||||||||||||||| |||| || || || |||||||| |||||| | || | Sbjct: 103571 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 103630 Query: 405 ttaaggttcatgaa 418 | || ||||||||| Sbjct: 103631 tcaaagttcatgaa 103644
>gb|AC100768.2| Homo sapiens chromosome 11, clone RP11-945A11, complete sequence Length = 190183 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 495 aagggcagctttggcttcagaa 516 |||||||||||||||||||||| Sbjct: 185851 aagggcagctttggcttcagaa 185872
>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence Length = 195609 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404 |||| ||||||||||||||||| |||| || || || |||||||| |||||| | || | Sbjct: 18407 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 18466 Query: 405 ttaaggttcatgaa 418 | || ||||||||| Sbjct: 18467 tcaaagttcatgaa 18480
>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete sequence Length = 113539 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 191 atgattgttacctcggcattgatcatatggaagggattgatg 232 ||||||||||| || ||| |||| |||||||||| ||||||| Sbjct: 34082 atgattgttacgtctgcactgataatatggaaggcattgatg 34041
>gb|AF212233.1|AF212233 Homo sapiens microsomal signal peptidase subunit mRNA, complete cds Length = 794 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404 |||| ||||||||||||||||| |||| || || || |||||||| |||||| | || | Sbjct: 329 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 388 Query: 405 ttaaggttcatgaa 418 | || ||||||||| Sbjct: 389 tcaaagttcatgaa 402
>gb|BC009703.1| Homo sapiens SEC11-like 3 (S. cerevisiae), mRNA (cDNA clone MGC:9299 IMAGE:3895819), complete cds Length = 782 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 345 ctggagaaatagttgtttttaatattgatggccgtgaaattccaattgttcaccgtgtga 404 |||| ||||||||||||||||| |||| || || || |||||||| |||||| | || | Sbjct: 316 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 375 Query: 405 ttaaggttcatgaa 418 | || ||||||||| Sbjct: 376 tcaaagttcatgaa 389
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tggagaaatagttgtttttaatattgatg 374 |||| |||||||||||||| ||||||||| Sbjct: 1225118 tggaaaaatagttgtttttgatattgatg 1225090
>emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 4/6 Length = 282183 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tggagaaatagttgtttttaatattgatg 374 |||| |||||||||||||| ||||||||| Sbjct: 164232 tggaaaaatagttgtttttgatattgatg 164204
>emb|AJ000744.1|CJAJ744 Campylobacter jejuni gmk gene, partial Length = 300 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tggagaaatagttgtttttaatattgatg 374 |||| |||||||||||||| ||||||||| Sbjct: 208 tggaaaaatagttgtttttgatattgatg 236
>gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, complete sequence Length = 190712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 ccaagaaagtggagaagttga 441 ||||||||||||||||||||| Sbjct: 42348 ccaagaaagtggagaagttga 42368
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 atccccgccgagatggggttcatcg 122 |||||||||||||||||| |||||| Sbjct: 133184 atccccgccgagatggggctcatcg 133208
>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5 Length = 89779 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 gttgtttttaatattgatggc 376 ||||||||||||||||||||| Sbjct: 40989 gttgtttttaatattgatggc 41009
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 gtcgatgcaggtccgccaggtcctc 169 |||| |||||||||||||||||||| Sbjct: 3492653 gtcgttgcaggtccgccaggtcctc 3492677
>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence Length = 198559 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 atggagcctggatttaaaag 300 |||||||||||||||||||| Sbjct: 25889 atggagcctggatttaaaag 25908
>gb|DQ008592.1| Escherichia coli serogroup O174 O antigen gene cluster, partial sequence Length = 5660 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tggagaaatagttgtttttaatat 369 |||||||||||||| ||||||||| Sbjct: 3277 tggagaaatagttgattttaatat 3254
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 gagatccccgccgagatggggttcatcg 122 |||||| |||||||||||| |||||||| Sbjct: 511404 gagatcaccgccgagatggcgttcatcg 511377
>ref|XM_955118.1| Neurospora crassa OR74A hypothetical protein (NCU05650.1) partial mRNA Length = 3285 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tgcaggtccgccaggtcctc 169 |||||||||||||||||||| Sbjct: 236 tgcaggtccgccaggtcctc 255
>ref|XM_325504.1| Neurospora crassa OR74A hypothetical protein (NCU05650.1) partial mRNA Length = 3285 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tgcaggtccgccaggtcctc 169 |||||||||||||||||||| Sbjct: 236 tgcaggtccgccaggtcctc 255
>gb|AC024812.2| Caenorhabditis elegans cosmid Y54E10BR, complete sequence Length = 54475 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 203 tcggcattgatcatatggaagggattgatggt 234 ||||||||||| || ||||||||| ||||||| Sbjct: 15301 tcggcattgatgatctggaagggaatgatggt 15270
>emb|AL354831.18| Human DNA sequence from clone RP11-188A23 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 144586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ggagaaatagttgtttttaa 366 |||||||||||||||||||| Sbjct: 95691 ggagaaatagttgtttttaa 95672
>gb|AC131886.5| Rattus norvegicus 4 BAC CH230-53A1 (Children's Hospital Oakland Research Institute) complete sequence Length = 222634 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 caagggcagctttggcttca 513 |||||||||||||||||||| Sbjct: 154004 caagggcagctttggcttca 153985
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 aaatagttgtttttaatatt 370 |||||||||||||||||||| Sbjct: 140657 aaatagttgtttttaatatt 140676
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 gagatccccgccgagatggggttcatcg 122 |||||| |||||||||||| |||||||| Sbjct: 168048 gagatcaccgccgagatggcgttcatcg 168021
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 gagatccccgccgagatggggttcatcg 122 |||||| |||||||||||| |||||||| Sbjct: 167974 gagatcaccgccgagatggcgttcatcg 167947
>emb|BX927395.18| Zebrafish DNA sequence from clone CH211-72A16 in linkage group 3, complete sequence Length = 152987 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 aaaggtgataataattttgg 471 |||||||||||||||||||| Sbjct: 98808 aaaggtgataataattttgg 98789
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gatgcaggtccgccaggtcc 167 |||||||||||||||||||| Sbjct: 6534014 gatgcaggtccgccaggtcc 6534033
>gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195430 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 tttaaaaggggtgatattctgttt 316 ||||||||| |||||||||||||| Sbjct: 26880 tttaaaaggagtgatattctgttt 26903
>ref|NM_058691.3| Caenorhabditis elegans Y54E10BR.5 (Y54E10BR.5) mRNA, complete cds Length = 701 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 tcggcattgatcatatggaagggattgatggt 234 ||||||||||| || ||||||||| ||||||| Sbjct: 100 tcggcattgatgatctggaagggaatgatggt 131
>emb|BX826032.1|CNS0A69G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 855 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 369 ttgatggccgtgaaattccaattgttca 396 ||||||| ||||||||||| |||||||| Sbjct: 366 ttgatggtcgtgaaattcccattgttca 393 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 185 ctcggtatgattgttacctcggcattgatcatatggaagg 224 ||||||||||| ||||| || |||||||| || ||||||| Sbjct: 182 ctcggtatgatcgttacatctgcattgataatttggaagg 221
>emb|BX548006.10| Zebrafish DNA sequence from clone DKEY-127P11, complete sequence Length = 158134 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgatattctgtttttgcaca 323 |||||||||||||||||||| Sbjct: 11213 tgatattctgtttttgcaca 11194
>emb|BX927116.18| Zebrafish DNA sequence from clone DKEY-261D11 in linkage group 22, complete sequence Length = 155808 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgatattctgtttttgcaca 323 |||||||||||||||||||| Sbjct: 77477 tgatattctgtttttgcaca 77458
>emb|AL929274.7| Zebrafish DNA sequence from clone CH211-79M20 in linkage group 22, complete sequence Length = 169459 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgatattctgtttttgcaca 323 |||||||||||||||||||| Sbjct: 42066 tgatattctgtttttgcaca 42047
>gb|AC119259.15| Mus musculus chromosome 18, clone RP24-285N19, complete sequence Length = 169310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 atggagcctggatttaaaag 300 |||||||||||||||||||| Sbjct: 159651 atggagcctggatttaaaag 159670
>gb|AD000014.1|MSGY423 Mycobacterium tuberculosis sequence from clone y423 Length = 42741 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 95 gagatccccgccgagatggggttcatcg 122 |||||| |||||||||||| |||||||| Sbjct: 41730 gagatcaccgccgagatggcgttcatcg 41757
>gb|AC118263.8| Mus musculus chromosome 1, clone RP24-502N12, complete sequence Length = 203126 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 aatagttgtttttaatattgatgg 375 ||||| |||||||||||||||||| Sbjct: 76322 aatagctgtttttaatattgatgg 76345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,267,354 Number of Sequences: 3902068 Number of extensions: 5267354 Number of successful extensions: 96418 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96093 Number of HSP's gapped (non-prelim): 313 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)