ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3o11 |
|---|---|
| Clone Library Name | barley_pub |
>TSN2_MOUSE (Q922J6) Tetraspanin-2 (Tspan-2)| Length = 221 Score = 38.5 bits (88), Expect = 0.014 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 5/120 (4%) Frame = +3 Query: 78 MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 248 M RG C+ LL N +AG A++ +G+ W R Sbjct: 1 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37 Query: 249 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 FG M + S DK PE +++ Y+ +G GA++ V FGC GA + C L Sbjct: 38 --FGGTMKDL-------SSEDKSPEYFYVGLYVLVGAGALMMTVGFFGCCGAMRESQCVL 88
>CD82_RAT (O70352) CD82 antigen (Metastasis suppressor homolog)| Length = 266 Score = 37.7 bits (86), Expect = 0.024 Identities = 29/117 (24%), Positives = 43/117 (36%) Frame = +3 Query: 81 AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 260 A C + L L N + G ++G+G+++LA+ +L Sbjct: 3 AGCVKVTKYFLFLFNLLFFILGAVILGFGVWILAD--------------KSSFISVLQTS 48 Query: 261 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 431 L V A Y+FIGVGA+ ++ GCIGA C L Y Sbjct: 49 SSSLQVGA-----------------YVFIGVGAITMLMGFLGCIGAVNEVRCLLGLY 88
>CD82_MOUSE (P40237) CD82 antigen (Inducible membrane protein R2) (C33 antigen)| (IA4) Length = 266 Score = 37.7 bits (86), Expect = 0.024 Identities = 29/117 (24%), Positives = 43/117 (36%) Frame = +3 Query: 81 AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 260 A C + L L N + G ++G+G+++LA+ +L Sbjct: 3 AGCVKVTKYFLFLFNLLFFILGAVILGFGVWILAD--------------KNSFISVLQTS 48 Query: 261 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 431 L V A Y+FIGVGA+ ++ GCIGA C L Y Sbjct: 49 SSSLQVGA-----------------YVFIGVGAITIVMGFLGCIGAVNEVRCLLGLY 88
>CD82_HUMAN (P27701) CD82 antigen (Inducible membrane protein R2) (C33 antigen)| (IA4) (Metastasis suppressor Kangai 1) (Suppressor of tumorigenicity-6) (Tetraspanin-27) (Tspan-27) Length = 267 Score = 37.4 bits (85), Expect = 0.032 Identities = 29/117 (24%), Positives = 44/117 (37%) Frame = +3 Query: 81 AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 260 +AC + L L N + G ++G+G+++LA+ +L Sbjct: 3 SACIKVTKYFLFLFNLIFFILGAVILGFGVWILAD--------------KSSFISVLQTS 48 Query: 261 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 431 L + A Y+FIGVGAV ++ GCIGA C L Y Sbjct: 49 SSSLRMGA-----------------YVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLY 88
>IM23_SCHMA (P19331) 23 kDa integral membrane protein (Sm23)| Length = 218 Score = 37.0 bits (84), Expect = 0.042 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = +3 Query: 246 LLMFGRPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLC 425 L++ G V + G K+ +A I + + VG +I IVS GC GA N C L Sbjct: 27 LVLIGAGAYVEVKFSQYGDNLHKVWQAAPIAIIV-VGVIILIVSFLGCCGAIKENVCMLY 85 Query: 426 CYSFLV 443 Y+F + Sbjct: 86 MYAFFL 91
>IM23_SCHHA (Q26499) 23 kDa integral membrane protein (Sh23)| Length = 218 Score = 37.0 bits (84), Expect = 0.042 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = +3 Query: 246 LLMFGRPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLC 425 L++ G V + G K+ +A I + + VG +I IVS GC GA N C L Sbjct: 27 LVLIGAGAYVEVKFSQYGDNLHKVWQAAPIAIIV-VGVIILIVSFLGCCGAIKENVCMLY 85 Query: 426 CYSFLV 443 Y+F + Sbjct: 86 MYAFFL 91
>TSN2_HUMAN (O60636) Tetraspanin-2 (Tspan-2)| Length = 221 Score = 37.0 bits (84), Expect = 0.042 Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%) Frame = +3 Query: 78 MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 248 M RG C+ LL N +AG A++ +G+ W R Sbjct: 1 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37 Query: 249 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 FG + + S DK PE +++ Y+ +G GA++ V FGC GA + C L Sbjct: 38 --FGGAIKEL-------SSEDKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88
>CD53_HUMAN (P19397) Leukocyte surface antigen CD53 (Cell surface glycoprotein| CD53) (Tetraspanin-25) (Tspan-25) Length = 219 Score = 36.6 bits (83), Expect = 0.055 Identities = 25/112 (22%), Positives = 40/112 (35%) Frame = +3 Query: 108 LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 287 +L N + G ++G+GIYLL Sbjct: 12 VLFFFNLLFWICGCCILGFGIYLLIH---------------------------------- 37 Query: 288 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 G F LP +F+ VG++I +V+ GC+G+ N C L + L+ Sbjct: 38 NNFGVLFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILL 89
>TSN18_MOUSE (Q80WR1) Tetraspanin-18 (Tspan-18)| Length = 248 Score = 36.2 bits (82), Expect = 0.071 Identities = 24/119 (20%), Positives = 46/119 (38%) Frame = +3 Query: 87 CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 266 C + L+ + NFF+ + G ++G GI++L + ++ P Sbjct: 5 CLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVD---------------PTGFREIVATNP 49 Query: 267 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 +LT A Y+ + +G ++F++ GC GA N C L + + Sbjct: 50 LLTTGA-----------------YIVLAMGGLLFLLGFLGCCGAVRENRCLLLFFFLFI 91
>TSN1_PONPY (Q5RC27) Tetraspanin-1 (Tspan-1)| Length = 241 Score = 36.2 bits (82), Expect = 0.071 Identities = 27/119 (22%), Positives = 44/119 (36%) Frame = +3 Query: 87 CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 266 C F + ++ L N + + G A++ GI W+ I L +FG Sbjct: 3 CFSFIKTMMILFNLLIFLCGAALLAVGI-----WVSIDGASF-----------LKIFGPL 46 Query: 267 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 + + G Y I G V+F + GC GA T + C L + F++ Sbjct: 47 SSSAMQFVNVG------------YFLIAAGVVVFALGFLGCYGAKTESKCALMTFFFIL 93
>TSN1_HUMAN (O60635) Tetraspanin-1 (Tspan-1) (Tetraspan NET-1) (Tetraspanin| TM4-C) Length = 241 Score = 36.2 bits (82), Expect = 0.071 Identities = 27/119 (22%), Positives = 44/119 (36%) Frame = +3 Query: 87 CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 266 C F + ++ L N + + G A++ GI W+ I L +FG Sbjct: 3 CFSFIKTMMILFNLLIFLCGAALLAVGI-----WVSIDGASF-----------LKIFGPL 46 Query: 267 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 + + G Y I G V+F + GC GA T + C L + F++ Sbjct: 47 SSSAMQFVNVG------------YFLIAAGVVVFALGFLGCYGAKTESKCALVTFFFIL 93
>IM23_SCHJA (P27591) 23 kDa integral membrane protein (Sj23)| Length = 218 Score = 35.4 bits (80), Expect = 0.12 Identities = 17/33 (51%), Positives = 19/33 (57%) Frame = +3 Query: 345 IGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 I VG VI IVS GC GA N C L Y+F + Sbjct: 59 IVVGVVILIVSFLGCCGAIKENVCMLYMYAFFL 91
>TSN2_RAT (Q9JJW1) Tetraspanin-2 (Tspan-2)| Length = 221 Score = 35.4 bits (80), Expect = 0.12 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%) Frame = +3 Query: 78 MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 248 M RG C+ LL N +AG A++ +G+ W R Sbjct: 1 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37 Query: 249 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 FG + + S +K PE +++ Y+ +G GA++ V FGC GA + C L Sbjct: 38 --FGGTIKDL-------SSEEKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88
>TSN18_BOVIN (Q58CY8) Tetraspanin-18 (Tspan-18)| Length = 249 Score = 34.7 bits (78), Expect = 0.21 Identities = 22/119 (18%), Positives = 45/119 (37%) Frame = +3 Query: 87 CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 266 C + L+ + NFF+ + G ++G GI+++ + ++ P Sbjct: 5 CLSCMKYLMFVFNFFIFLGGACLLGIGIWVMVD---------------PTGFREIVAANP 49 Query: 267 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 +L A Y+ + +G ++F++ GC GA N C L + + Sbjct: 50 LLITGA-----------------YILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFI 91
>CD53_RAT (P24485) Leukocyte surface antigen CD53 (Cell surface glycoprotein| CD53) (Leukocyte antigen MRC OX-44) Length = 218 Score = 33.9 bits (76), Expect = 0.35 Identities = 25/112 (22%), Positives = 41/112 (36%) Frame = +3 Query: 108 LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 287 +L NF V G ++G+GI+LL + Sbjct: 11 VLFFFNFLFWVCGCCILGFGIHLLVQ---------------------------------- 36 Query: 288 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 G F LP + + VG++I +V+ GC+G+ N C L + L+ Sbjct: 37 NTYGILFRNLPFLTLGNVLVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 88
>TSN5_RAT (Q68VK5) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily| member 9) Length = 268 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 434 ++LF+ VG V+FI+ GCIGA NT L +S Sbjct: 62 VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95
>TSN5_MOUSE (P62080) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily| member 9) (Tetraspan NET-4) Length = 268 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 434 ++LF+ VG V+FI+ GCIGA NT L +S Sbjct: 62 VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95
>TSN5_HUMAN (P62079) Tetraspanin-5 (Tspan-5) (Transmembrane 4 superfamily| member 9) (Tetraspan NET-4) Length = 268 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 434 ++LF+ VG V+FI+ GCIGA NT L +S Sbjct: 62 VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95
>CD9_FELCA (P40239) CD9 antigen| Length = 225 Score = 33.5 bits (75), Expect = 0.46 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = +3 Query: 309 DKLPEAWF--IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 D P +++ +Y+ IG GA++ +V GC GA + C L Sbjct: 47 DSQPSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCML 86
>CD9_BOVIN (P30932) CD9 antigen| Length = 225 Score = 33.5 bits (75), Expect = 0.46 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL-CCYSFLV 443 +Y+ IG GA++ +V GC GA + C L +SFL+ Sbjct: 57 VYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFSFLL 94
>CD53_MOUSE (Q61451) Leukocyte surface antigen CD53 (Cell surface glycoprotein| CD53) Length = 218 Score = 33.1 bits (74), Expect = 0.60 Identities = 24/112 (21%), Positives = 40/112 (35%) Frame = +3 Query: 108 LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 287 +L + N V G ++G+GIY L + Sbjct: 11 VLFIFNLLFWVCGCCILGFGIYFLVQ---------------------------------- 36 Query: 288 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 G F LP + + VG++I +V+ GC+G+ N C L + L+ Sbjct: 37 NTYGVLFRNLPFLTLGNILVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 88
>TSN10_MOUSE (Q8VCF5) Tetraspanin-10 (Tspan-10) (Oculospanin)| Length = 331 Score = 32.7 bits (73), Expect = 0.79 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%) Frame = +3 Query: 252 MFGRPMLTVVALG---------EGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 404 +F P L +A G +G + +P + L +G G V+ +VSL GC+GA Sbjct: 84 LFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLG-GLVVSVVSLSGCLGAFC 142 Query: 405 RNTCCLCCY 431 N+C L Y Sbjct: 143 ENSCLLHWY 151
>CD9_PIG (Q8WMQ3) CD9 antigen| Length = 225 Score = 32.7 bits (73), Expect = 0.79 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 +Y+ IG GA++ +V GC GA + C L Sbjct: 57 VYILIGAGALMMVVGFLGCCGAVQESQCML 86
>TSN9_MOUSE (Q8BJU2) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)| Length = 239 Score = 32.7 bits (73), Expect = 0.79 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +3 Query: 279 VALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 431 V+ G +F P L I +G ++ + GC+GA N C L + Sbjct: 36 VSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86
>TSN9_HUMAN (O75954) Tetraspanin-9 (Tspan-9) (Tetraspan NET-5)| Length = 239 Score = 32.7 bits (73), Expect = 0.79 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +3 Query: 279 VALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 431 V+ G +F P L I +G ++ + GC+GA N C L + Sbjct: 36 VSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86
>TSN18_HUMAN (Q96SJ8) Tetraspanin-18 (Tspan-18)| Length = 248 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/119 (17%), Positives = 44/119 (36%) Frame = +3 Query: 87 CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 266 C + L+ + NFF+ + G ++ GI+++ + ++ P Sbjct: 5 CLSCMKYLMFVFNFFIFLGGACLLAIGIWVMVD---------------PTGFREIVAANP 49 Query: 267 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 +L A Y+ + +G ++F++ GC GA N C L + + Sbjct: 50 LLLTGA-----------------YILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFI 91
>CD9_RAT (P40241) CD9 antigen| Length = 225 Score = 32.3 bits (72), Expect = 1.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 +Y+ IG GA++ +V GC GA + C L Sbjct: 57 VYILIGAGALMMLVGFLGCCGAVQESQCML 86
>CD9_MOUSE (P40240) CD9 antigen| Length = 225 Score = 32.3 bits (72), Expect = 1.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 +Y+ IG GA++ +V GC GA + C L Sbjct: 57 VYILIGAGALMMLVGFLGCCGAVQESQCML 86
>NEOR_STRCY (P14501) Neomycin resistance protein| Length = 437 Score = 32.3 bits (72), Expect = 1.0 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = -2 Query: 195 SSSTPRAGRSHS----RPWQGRRR*GKS*AA*AGTRRIPGTPPSRNDLIKPPGTICKLI 31 SSS+ R+GR R GR+ G AGTRR G PP ++D+++ P I L+ Sbjct: 223 SSSSVRSGRQRPGRVHRQDAGRQEPGPG----AGTRRPQGRPPGQHDVLRTPSRIGDLM 277
>CD9_HUMAN (P21926) CD9 antigen (p24) (Leukocyte antigen MIC3)| (Motility-related protein) (MRP-1) (Tetraspanin-29) (Tspan-29) Length = 227 Score = 32.3 bits (72), Expect = 1.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 +Y+ IG GA++ +V GC GA + C L Sbjct: 59 VYILIGAGALMMLVGFLGCCGAVQESQCML 88
>CD9_CERAE (P30409) CD9 antigen (27 kDa diphtheria toxin receptor-associated| protein) (DRAP27) Length = 227 Score = 32.3 bits (72), Expect = 1.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 +Y+ IG GA++ +V GC GA + C L Sbjct: 59 VYILIGAGALMMLVGFLGCCGAVQESQCML 88
>CD81_SAGOE (Q9N0J9) CD81 protein| Length = 236 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 IY+ I VGAV+ V GC GA + C L Sbjct: 62 IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>CD81_RAT (Q62745) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) Length = 236 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 IY+ I VGAV+ V GC GA + C L Sbjct: 62 IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>CD81_PANTR (P60034) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) Length = 236 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 IY+ I VGAV+ V GC GA + C L Sbjct: 62 IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) Length = 236 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 IY+ I VGAV+ V GC GA + C L Sbjct: 62 IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>CD81_HUMAN (P60033) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) (Tetraspanin-28) (Tspan-28) Length = 236 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 IY+ I VGAV+ V GC GA + C L Sbjct: 62 IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>CD81_CERAE (O97703) CD81 antigen| Length = 236 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 422 IY+ I VGAV+ V GC GA + C L Sbjct: 62 IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>TSN3_MOUSE (Q9QY33) Tetraspanin-3 (Tspan-3) (Transmembrane 4 superfamily| member 8) (Tetraspanin TM4-A) (OSP-associated protein 1) (OAP-1) Length = 253 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = +3 Query: 303 FFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 FF+ + + + I VGA++FI+ L GC + C L + F++ Sbjct: 44 FFEDVYTLFPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVFIL 90
>CD63_FELCA (Q76B49) CD63 antigen| Length = 237 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Frame = +3 Query: 246 LLMFGRPMLTVVALGEGGSFFDK-------LPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 404 LL F + ++A+G G + P + + I VGA +F+V+ GC GA Sbjct: 17 LLAFCACAVGLIAVGVGAQLVLRQTIVQGATPGSLLPVVIIAVGAFLFLVAFVGCCGACK 76 Query: 405 RNTCCLCCYSFLV 443 N C + ++ + Sbjct: 77 ENYCLMVTFAIFL 89
>CD63_BOVIN (Q9XSK2) CD63 antigen| Length = 236 Score = 31.2 bits (69), Expect = 2.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +3 Query: 339 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 + I VGA +F+V+ GC GA N C + ++ + Sbjct: 55 VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89
>CD63_RAT (P28648) CD63 antigen (Mast cell antigen AD1)| Length = 237 Score = 31.2 bits (69), Expect = 2.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +3 Query: 339 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 + I VGA +F+V+ GC GA N C + ++ + Sbjct: 55 VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89
>CD63_MOUSE (P41731) CD63 antigen| Length = 237 Score = 31.2 bits (69), Expect = 2.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +3 Query: 339 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 443 + I VGA +F+V+ GC GA N C + ++ + Sbjct: 55 VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 89
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 215 PSATTGDPHPLREQVDPIADHG-KAGDGEEKVEQPKQALEESPARRHLE 72 P+A + P E+V P A+ G + G+ +EKVE+ K+ +ESP E Sbjct: 685 PAAKSPAPKSPVEEVKPKAEAGAEKGEQKEKVEEEKKEAKESPKEEKAE 733
>TSN17_MOUSE (Q9D7W4) Tetraspanin-17 (Tspan-17) (Transmembrane 4 superfamily| member 17) (Tetraspan protein SB134) (F-box only protein 23) Length = 270 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 434 ++LF+ VG V+ ++ GCIGA NT L +S Sbjct: 64 VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFS 97
>TSN17_HUMAN (Q96FV3) Tetraspanin-17 (Tspan-17) (Transmembrane 4 superfamily| member 17) (Tetraspan protein SB134) (F-box only protein 23) Length = 263 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +3 Query: 333 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 434 ++LF+ VG V+ ++ GCIGA NT L +S Sbjct: 64 VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFS 97
>SIG10_HUMAN (Q96LC7) Sialic acid-binding Ig-like lectin 10 precursor| (Siglec-10) (Siglec-like protein 2) Length = 697 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +1 Query: 94 DSSSACLGCSTFSSPSPALPWSAMGSTCSRSG*GSPVVAE 213 + S CL C T SSP L W+ G S S P V E Sbjct: 372 EGQSLCLVCVTHSSPPARLSWTQRGQVLSPSQPSDPGVLE 411
>FA44A_HUMAN (Q8NFC6) Protein FAM44A| Length = 502 Score = 30.4 bits (67), Expect = 3.9 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 9/125 (7%) Frame = -3 Query: 365 DNSTNTNEQIDEPCFG*LVEETAALSKGH--------DRQHRAAEHK*LSXXXXXXRCPS 210 + + + E D PC VEE +K H D Q ++E K S + S Sbjct: 272 ETAPKSEEFSDLPC---PVEEIKNYTKEHNNLILLNKDVQQESSEQKNKSTDKGEKKPDS 328 Query: 209 ATTGD-PHPLREQVDPIADHGKAGDGEEKVEQPKQALEESPARRHLETI*SSPQAQSVN* 33 G+ +E+ + DH K + +KV+ KQA E+ L + +S +A++V Sbjct: 329 NEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQAKEKEVESLKLPSEKNSNKAKTVEG 388 Query: 32 LTRDF 18 DF Sbjct: 389 TKEDF 393
>YGGA_AERHY (P52047) Putative amino acid transporter yggA| Length = 225 Score = 30.0 bits (66), Expect = 5.1 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 377 SVWLHWSRDKEYMLLVLLFFLGHIINPC*GWRC 475 S WL SR LL+LL +++PC GWRC Sbjct: 171 SPWLARSRQGYSKLLILL-----LVSPCWGWRC 198
>CD63_RABIT (Q28709) CD63 antigen| Length = 237 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Frame = +3 Query: 246 LLMFGRPMLTVVALGEGGSFF-------DKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 404 LL F + ++A+G G P + + I VGA +F+V+ GC G Sbjct: 17 LLAFCACAVGLIAVGVGAQLVLSQTITHGATPGSLLPVVIIAVGAFLFLVAFVGCCGTCK 76 Query: 405 RNTCCLCCYSFLV 443 N C + ++ + Sbjct: 77 ENYCLMITFAIFL 89
>CD63_HUMAN (P08962) CD63 antigen (Melanoma-associated antigen ME491)| (Lysosome-associated membrane glycoprotein 3) (LAMP-3) (Ocular melanoma-associated antigen) (OMA81H) (Granulophysin) (Tetraspanin-30) (Tspan-30) Length = 237 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Frame = +3 Query: 246 LLMFGRPMLTVVALGEGGSFF-------DKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 404 LL F + ++A+G G P + + I VG +F+V+ GC GA Sbjct: 17 LLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLLPVVIIAVGVFLFLVAFVGCCGACK 76 Query: 405 RNTCCLCCYSFLV 443 N C + ++ + Sbjct: 77 ENYCLMITFAIFL 89
>MYCN_CHICK (P18444) N-myc proto-oncogene protein| Length = 441 Score = 30.0 bits (66), Expect = 5.1 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = -2 Query: 315 ACRRNCRPLQGPRPSASGGRT*VTQPAGPETAVPLRHHRRSSSTPRAGRSHSRPWQGRR 139 ACRR +P +GP + GG V + P P ++R ++ P G + P GRR Sbjct: 168 ACRRREQPQRGPGRAELGGS--VPECVDPAVVFPFPVNKREAAVPSGGET---PRGGRR 221
>PHR_NEUCR (P27526) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 642 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = -1 Query: 526 IHWKLRLFQLWSKNMNAAPPASARINNMTKKE*QHKQHVFLVPAPMQPNRETMKITAPTP 347 +H+KL+ SK +APP ++ +N + K+ P PN + + AP P Sbjct: 20 LHFKLKTTMAPSKRKASAPPQTSHVNGNPSAD--KKRKTTTDAPPTNPNTSSDPLRAPHP 77 Query: 346 MNK 338 K Sbjct: 78 FYK 80
>DDIT3_CRIGR (P14607) DNA damage-inducible transcript 3 (DDIT-3) (Growth arrest| and DNA-damage-inducible protein GADD153) (C/EBP-homologous protein) (CHOP) Length = 168 Score = 29.6 bits (65), Expect = 6.7 Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Frame = -3 Query: 524 PLEITSFPTMVKEYECSTSSLSKD**YDQERITTQATCIPCPCSNAAKQRNDEDNSTN-- 351 P E+TS + + S S ++++ DQ R + CP KQR E N Sbjct: 69 PAEVTSSSQSPRSPDSSQSCMAQEEEEDQGRTRKRKQSGQCPARGTGKQRMKEKEQENER 128 Query: 350 -------TNEQIDEPCFG*LVEETAALSKGHDRQH 267 NE++ + L E A G DR H Sbjct: 129 KVAQLAEENERLKQE-IERLTREVEATRPGSDRPH 162
>NEO1_HUMAN (Q92859) Neogenin precursor| Length = 1461 Score = 29.6 bits (65), Expect = 6.7 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 100 SSACLGCSTFSSPSPALPWSAMGSTCSRSG*GSPVVAEGHRRLRP 234 SS L CS +S PSP + W G+ + +V++ R+L P Sbjct: 68 SSVILNCSAYSEPSPKIEWKKDGTFLN-------LVSDDRRQLLP 105
>KLC_STRPU (Q05090) Kinesin light chain (KLC)| Length = 686 Score = 29.6 bits (65), Expect = 6.7 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 16/60 (26%) Frame = -2 Query: 210 RHHRRSSSTPRAGRSHS---------------RPWQGRRR-*GKS*AA*AGTRRIPGTPP 79 RHHRRSS TPR G + S W+ +R+ +S + AG IP +PP Sbjct: 536 RHHRRSSGTPRHGSTESVSYEKTDGSEEVSIGVAWKAKRKAKDRSRSIPAGYVEIPRSPP 595
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = -2 Query: 309 RRNCRPLQGPRPSASGGRT*VTQPAGPE-----TAVPLRHHRRSSSTP 181 RRN RP++G P+ + T + PA P A P+R +SS +P Sbjct: 512 RRNGRPVEGAEPAVAS--TPIAAPAAPRKPTQVVATPVRAANKSSGSP 557
>MKL1_MOUSE (Q8K4J6) MKL/myocardin-like protein 1 (Myocardin-related| transcription factor A) (MRTF-A) (Megakaryoblastic leukemia 1 protein homolog) (Basic SAP coiled-coil transcription activator) Length = 964 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -1 Query: 427 QHKQHVFLVPAPMQPNRETMKITAPTP 347 QH + ++PAP +P+ ET +APTP Sbjct: 320 QHYNYQAILPAPPKPSAETPGSSAPTP 346
>TSN8_HUMAN (P19075) Tetraspanin-8 (Tspan-8) (Transmembrane 4 superfamily| member 3) (Tumor-associated antigen CO-029) Length = 237 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 339 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 431 + I VGA+I I+ GC GA + C L + Sbjct: 58 ILIAVGAIIMILGFLGCCGAIKESRCMLLLF 88
>M3K2_MOUSE (Q61083) Mitogen-activated protein kinase kinase kinase 2 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2) Length = 619 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +2 Query: 191 EDLRWWRRGTAVSGPAG*VTYVRPPDADGRGP--WRGRQFLRQATRSMVHL 337 +D R RRG+ + P VT + PP R P WR + L Q V+L Sbjct: 322 DDSRIRRRGSDIDNPTLTVTDISPPSRSPRAPTNWRLGKLLGQGAFGRVYL 372
>SPIKE_CVBLY (P25192) Spike glycoprotein precursor (Peplomer protein) (E2)| [Contains: Spike protein S1 (90B); Spike protein S2 (90A)] Length = 1363 Score = 29.3 bits (64), Expect = 8.7 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = +3 Query: 327 WFIYLFIGVGAVIFIVSLF---GCIGAGTR--NTCCLCC 428 W+++L IG+ V +V LF C G GT C CC Sbjct: 1308 WYVWLLIGLAGVAMLVLLFFICCCTGCGTSCFKKCGGCC 1346
>SYSM_MOUSE (Q9JJL8) Seryl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.11) (Serine--tRNA ligase) (SerRSmt) Length = 518 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -1 Query: 496 WSKNMNAAPPASARINNMTKKE*QHKQHVFLVPAPMQPNRETMKITAPT 350 ++ +NA A R+ + Q K LVPA +QP T +ITAPT Sbjct: 446 FAHTVNATACAVPRVLIALLESNQQKDGSVLVPAALQPYLGTDRITAPT 494
>NEO1_RAT (P97603) Neogenin precursor (Fragment)| Length = 1377 Score = 29.3 bits (64), Expect = 8.7 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 100 SSACLGCSTFSSPSPALPWSAMGSTCSRSG*GSPVVAEGHRRLRP 234 SS L CS +S PSP + W G+ + +V++ R+L P Sbjct: 37 SSVILNCSAYSEPSPNIEWKKDGTFLN-------LVSDDRRQLLP 74 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,581,268 Number of Sequences: 219361 Number of extensions: 1895753 Number of successful extensions: 6014 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 5674 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6006 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
