ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3o11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481260.1| Oryza sativa (japonica cultivar-group), mRNA 420 e-114
2dbj|AK101411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 420 e-114
3gb|AY105494.1| Zea mays PCO138455 mRNA sequence 254 3e-64
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 222 1e-54
5dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic D... 222 1e-54
6dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic D... 222 1e-54
7gb|AY111642.1| Zea mays CL34420_2 mRNA sequence 62 2e-06
8ref|NM_202223.1| Arabidopsis thaliana TOM2A (TOBAMOVIRUS MULTIPL... 44 0.51
9ref|NM_102974.2| Arabidopsis thaliana TOM2A (TOBAMOVIRUS MULTIPL... 44 0.51
10ref|NM_001036050.1| Arabidopsis thaliana TOM2A (TOBAMOVIRUS MULT... 44 0.51
11gb|AC103939.8| Mus musculus chromosome 18, clone RP23-300E7, com... 44 0.51
12gb|AF334723.1| Arabidopsis thaliana clone C00117 (h) unknown pro... 44 0.51
13gb|AF385687.1|AF385687 Arabidopsis thaliana At1g32400/F5D14_22 m... 44 0.51
14emb|BX814048.1|CNS0ADMF Arabidopsis thaliana Full-length cDNA Co... 44 0.51
15emb|BX817086.1|CNS0ADBV Arabidopsis thaliana Full-length cDNA Co... 44 0.51
16emb|BX816778.1|CNS0AD9Y Arabidopsis thaliana Full-length cDNA Co... 44 0.51
17gb|AY088560.1| Arabidopsis thaliana clone 7849 mRNA, complete se... 44 0.51
18gb|AC104892.10| Mus musculus chromosome 18, clone RP23-262H4, co... 44 0.51
19dbj|AB085684.1| Arabidopsis thaliana TOM2A mRNA for tobamovirus ... 44 0.51
20gb|AC123941.3| Mus musculus BAC clone RP23-458G24 from chromosom... 42 2.0
21ref|XM_651771.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 42 2.0
22gb|AC108421.8| Mus musculus chromosome 19, clone RP23-433N7, com... 42 2.0
23emb|AL844223.9| Mouse DNA sequence from clone RP23-468N9 on chro... 42 2.0
24ref|NM_190194.1| Oryza sativa (japonica cultivar-group), predic... 40 8.0
25gb|AY735112.1| Streptomyces hygroscopicus mannopeptimycin biosyn... 40 8.0
26gb|AY506543.1| Rhodospirillum centenum apolipoprotein n-acyltran... 40 8.0
27gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's... 40 8.0
28gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete s... 40 8.0
29gb|AY448033.1| Brassica napus cultivar SI271 S-locus receptor ki... 40 8.0
30gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, co... 40 8.0
31emb|AL132982.12|HSKB152G3 Human DNA sequence from clone KB-152G3... 40 8.0
32emb|AJ617485.1| Botryotinia fuckeliana Bcap5 gene for aspartic p... 40 8.0
33gb|AC094105.3| Homo sapiens chromosome 5 clone RP11-468D11, comp... 40 8.0
34gb|AC024606.11| Homo sapiens chromosome 10 clone RP11-360I20, co... 40 8.0
35emb|AL116346.1|CNS01D42 Botrytis cinerea strain T4 cDNA library 40 8.0
36emb|AL110734.1|CNS018S7 Botrytis cinerea strain T4 cDNA library 40 8.0
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
38gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa004... 40 8.0
39ref|XM_219401.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 8.0
40dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
41dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
42dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
43emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-3... 40 8.0
44emb|BX927216.16| Zebrafish DNA sequence from clone DKEY-179A6 in... 40 8.0
45gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1... 40 8.0
46emb|BX323457.7| Zebrafish DNA sequence from clone CH211-260B17 i... 40 8.0
47emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chr... 40 8.0 
>ref|XM_481260.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1385

 Score =  420 bits (212), Expect = e-114
 Identities = 433/504 (85%), Gaps = 2/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  ggcgtgccggggattcttcgagtgcctgcttaggctgctcaactttttcctcaccgtcgc 142
           |||||||||||| |||||||| ||||| || | ||||||||||||| ||||||| |||||
Sbjct: 195 ggcgtgccggggcttcttcgaatgcctactgaagctgctcaactttgtcctcacggtcgc 254

                                                                       
Query: 143 cggccttgccatggtcggctatgggatctacctgctcgcggagtggatgaggatctccgg 202
           |||||| ||||||||||| |||||||| ||||||||||  |||||||||||||| |||||
Sbjct: 255 cggcctcgccatggtcggatatgggatttacctgctcgtcgagtggatgaggatttccgg 314

                                                                       
Query: 203 tggtggcggaggggcaccgccgtctccggccccgccggctgagttacttatgttcggccg 262
            || ||||| |||||||| ||||| || || ||||| |||||||| |||||||| |||||
Sbjct: 315 cggcggcggcggggcaccaccgtcgccagcgccgcctgctgagttgcttatgtttggccg 374

                                                                       
Query: 263 cccgatgctgacggtcgtggcccttggagagggcggcagtttcttcgacaagctacccga 322
           ||||||||| ||||  || ||||| || || || |||||||||||||||||||| ||  |
Sbjct: 375 cccgatgctcacggctgttgccctaggtgacggtggcagtttcttcgacaagctccctaa 434

                                                                       
Query: 323 agcatggttcatctatttgttcattggtgttggtgctgttatcttcatcgtttctctgtt 382
           ||||||||||||||||||||||||||||||||||||  |||||||  |  | ||||||||
Sbjct: 435 agcatggttcatctatttgttcattggtgttggtgcaattatctttgtgatctctctgtt 494

                                                                       
Query: 383 tggctgcattggagcagggacaaggaatacatgttgcttgtgttgttattctttcttggt 442
           ||| ||||||||||| |  |||||||| || || ||||||||||||||  ||||||||||
Sbjct: 495 tggttgcattggagctgcaacaaggaacacctgctgcttgtgttgttacgctttcttggt 554

                                                                       
Query: 443 catattattaatccttgctgaggctggaggtgctgcattcatattctttgaccatagttg 502
           |||||| || ||||||| ||||||||||| |||||||||||||||||| ||| | || ||
Sbjct: 555 catattgttgatccttgttgaggctggagctgctgcattcatattcttcgacgaaagctg 614

                                                                       
Query: 503 gaaaagacgtaatttccagtggataagacacaaaactttgatgccatgtatgactttctg 562
           | |||||||||| |||| ||||| |||||  | || |||||||  |||||||||||||| 
Sbjct: 615 g-aaagacgtaa-ttccggtggacaagactgagaattttgatgtaatgtatgactttctc 672

                                   
Query: 563 aaagaaaactggaagattgcaaga 586
           || ||||||||| |||||||||||
Sbjct: 673 aaggaaaactgggagattgcaaga 696
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>dbj|AK101411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037J09, full
           insert sequence
          Length = 1385

 Score =  420 bits (212), Expect = e-114
 Identities = 433/504 (85%), Gaps = 2/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  ggcgtgccggggattcttcgagtgcctgcttaggctgctcaactttttcctcaccgtcgc 142
           |||||||||||| |||||||| ||||| || | ||||||||||||| ||||||| |||||
Sbjct: 195 ggcgtgccggggcttcttcgaatgcctactgaagctgctcaactttgtcctcacggtcgc 254

                                                                       
Query: 143 cggccttgccatggtcggctatgggatctacctgctcgcggagtggatgaggatctccgg 202
           |||||| ||||||||||| |||||||| ||||||||||  |||||||||||||| |||||
Sbjct: 255 cggcctcgccatggtcggatatgggatttacctgctcgtcgagtggatgaggatttccgg 314

                                                                       
Query: 203 tggtggcggaggggcaccgccgtctccggccccgccggctgagttacttatgttcggccg 262
            || ||||| |||||||| ||||| || || ||||| |||||||| |||||||| |||||
Sbjct: 315 cggcggcggcggggcaccaccgtcgccagcgccgcctgctgagttgcttatgtttggccg 374

                                                                       
Query: 263 cccgatgctgacggtcgtggcccttggagagggcggcagtttcttcgacaagctacccga 322
           ||||||||| ||||  || ||||| || || || |||||||||||||||||||| ||  |
Sbjct: 375 cccgatgctcacggctgttgccctaggtgacggtggcagtttcttcgacaagctccctaa 434

                                                                       
Query: 323 agcatggttcatctatttgttcattggtgttggtgctgttatcttcatcgtttctctgtt 382
           ||||||||||||||||||||||||||||||||||||  |||||||  |  | ||||||||
Sbjct: 435 agcatggttcatctatttgttcattggtgttggtgcaattatctttgtgatctctctgtt 494

                                                                       
Query: 383 tggctgcattggagcagggacaaggaatacatgttgcttgtgttgttattctttcttggt 442
           ||| ||||||||||| |  |||||||| || || ||||||||||||||  ||||||||||
Sbjct: 495 tggttgcattggagctgcaacaaggaacacctgctgcttgtgttgttacgctttcttggt 554

                                                                       
Query: 443 catattattaatccttgctgaggctggaggtgctgcattcatattctttgaccatagttg 502
           |||||| || ||||||| ||||||||||| |||||||||||||||||| ||| | || ||
Sbjct: 555 catattgttgatccttgttgaggctggagctgctgcattcatattcttcgacgaaagctg 614

                                                                       
Query: 503 gaaaagacgtaatttccagtggataagacacaaaactttgatgccatgtatgactttctg 562
           | |||||||||| |||| ||||| |||||  | || |||||||  |||||||||||||| 
Sbjct: 615 g-aaagacgtaa-ttccggtggacaagactgagaattttgatgtaatgtatgactttctc 672

                                   
Query: 563 aaagaaaactggaagattgcaaga 586
           || ||||||||| |||||||||||
Sbjct: 673 aaggaaaactgggagattgcaaga 696
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>gb|AY105494.1| Zea mays PCO138455 mRNA sequence
          Length = 1377

 Score =  254 bits (128), Expect = 3e-64
 Identities = 244/280 (87%), Gaps = 2/280 (0%)
 Strand = Plus / Plus

                                                                       
Query: 307 tcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtgctgttatct 366
           |||||| ||||||| |||||||||| || ||||||||||||||||||||||||  | | |
Sbjct: 389 tcgacatgctacccaaagcatggtttatttatttgttcattggtgttggtgctactgttt 448

                                                                       
Query: 367 tcatcgtttctctgtttggctgcattggagcagggacaaggaatacatgttgcttgtgtt 426
           || |||| |||||||||||||||||||||||||||||||| || || || || |||||||
Sbjct: 449 tcctcgtgtctctgtttggctgcattggagcagggacaagaaacacctgctgtttgtgtt 508

                                                                       
Query: 427 gttattctttcttggtcatattattaatccttgctgaggctggaggtgctgcattcatat 486
             ||| | |||||||||||||| || ||||||||||| ||||||| |||||||||||| |
Sbjct: 509 tctatgccttcttggtcatattgttgatccttgctgaagctggagctgctgcattcattt 568

                                                                       
Query: 487 tctttgaccatagttggaaaagacgtaatttccagtggataagacacaaaactttgatgc 546
           ||||||||||||| ||| ||||| |||| |||||||||| |||||||| |||||||||| 
Sbjct: 569 tctttgaccatagctgg-aaagatgtaa-ttccagtggacaagacacataactttgatgt 626

                                                   
Query: 547 catgtatgactttctgaaagaaaactggaagattgcaaga 586
            ||||||| |||||||||  |||||||| |||||||||||
Sbjct: 627 tatgtatggctttctgaagaaaaactgggagattgcaaga 666



 Score =  168 bits (85), Expect = 1e-38
 Identities = 109/117 (93%)
 Strand = Plus / Plus

                                                                       
Query: 76  agatggcggcgtgccggggattcttcgagtgcctgcttaggctgctcaactttttcctca 135
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||||||
Sbjct: 176 agatggcggcgtgccggggcttcttcgagtgcctgctcaggctgctcaacttcatcctca 235

                                                                    
Query: 136 ccgtcgccggccttgccatggtcggctatgggatctacctgctcgcggagtggatga 192
           ||||||||||||| |||||||||||||| ||||||||||||||||  ||||||||||
Sbjct: 236 ccgtcgccggcctcgccatggtcggctacgggatctacctgctcgtcgagtggatga 292
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  222 bits (112), Expect = 1e-54
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                            
Query: 83       ggcgtgccggggattcttcgagtgcctgcttaggctgctcaactttttcctcaccgtcgc 142
                |||||||||||| |||||||| ||||| || | ||||||||||||| ||||||| |||||
Sbjct: 11055788 ggcgtgccggggcttcttcgaatgcctactgaagctgctcaactttgtcctcacggtcgc 11055729

                                                                            
Query: 143      cggccttgccatggtcggctatgggatctacctgctcgcggagtggatgaggatctccgg 202
                |||||| ||||||||||| |||||||| ||||||||||  |||||||||||||| |||||
Sbjct: 11055728 cggcctcgccatggtcggatatgggatttacctgctcgtcgagtggatgaggatttccgg 11055669

                                                                            
Query: 203      tggtggcggaggggcaccgccgtctccggccccgccggctgagttacttatgttcggccg 262
                 || ||||| |||||||| ||||| || || ||||| |||||||| |||||||| |||||
Sbjct: 11055668 cggcggcggcggggcaccaccgtcgccagcgccgcctgctgagttgcttatgtttggccg 11055609

                                                                            
Query: 263      cccgatgctgacggtcgtggcccttggagagggcggcagtttcttcgacaagctacccga 322
                ||||||||| ||||  || ||||| || || || |||||||||||||||||||| ||  |
Sbjct: 11055608 cccgatgctcacggctgttgccctaggtgacggtggcagtttcttcgacaagctccctaa 11055549

                        
Query: 323      agcatggt 330
                ||||||||
Sbjct: 11055548 agcatggt 11055541



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                            
Query: 328      ggttcatctatttgttcattggtgttggtgctgttatcttcatcgtttctctgtttggct 387
                |||||||||||||||||||||||||||||||  |||||||  |  | ||||||||||| |
Sbjct: 11055092 ggttcatctatttgttcattggtgttggtgcaattatctttgtgatctctctgtttggtt 11055033

                                                         
Query: 388      gcattggagcagggacaaggaatacatgttgcttgtgttgt 428
                |||||||||| |  |||||||| || || ||||||||||||
Sbjct: 11055032 gcattggagctgcaacaaggaacacctgctgcttgtgttgt 11054992



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                          
Query: 433      ctttcttggtcatattattaatccttgctgaggctggaggtgctgcattcatattctt 490
                |||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||
Sbjct: 11054416 ctttcttggtcatattgttgatccttgttgaggctggagctgctgcattcatattctt 11054359



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 539      tttgatgccatgtatgactttctgaaagaaaactggaagattgcaaga 586
                |||||||  |||||||||||||| || ||||||||| |||||||||||
Sbjct: 11054217 tttgatgtaatgtatgactttctcaaggaaaactgggagattgcaaga 11054170



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 551     tatgactttctgaaagaaaa 570
               ||||||||||||||||||||
Sbjct: 9224956 tatgactttctgaaagaaaa 9224975
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>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1446H11
          Length = 135488

 Score =  222 bits (112), Expect = 1e-54
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                         
Query: 83    ggcgtgccggggattcttcgagtgcctgcttaggctgctcaactttttcctcaccgtcgc 142
             |||||||||||| |||||||| ||||| || | ||||||||||||| ||||||| |||||
Sbjct: 26394 ggcgtgccggggcttcttcgaatgcctactgaagctgctcaactttgtcctcacggtcgc 26335

                                                                         
Query: 143   cggccttgccatggtcggctatgggatctacctgctcgcggagtggatgaggatctccgg 202
             |||||| ||||||||||| |||||||| ||||||||||  |||||||||||||| |||||
Sbjct: 26334 cggcctcgccatggtcggatatgggatttacctgctcgtcgagtggatgaggatttccgg 26275

                                                                         
Query: 203   tggtggcggaggggcaccgccgtctccggccccgccggctgagttacttatgttcggccg 262
              || ||||| |||||||| ||||| || || ||||| |||||||| |||||||| |||||
Sbjct: 26274 cggcggcggcggggcaccaccgtcgccagcgccgcctgctgagttgcttatgtttggccg 26215

                                                                         
Query: 263   cccgatgctgacggtcgtggcccttggagagggcggcagtttcttcgacaagctacccga 322
             ||||||||| ||||  || ||||| || || || |||||||||||||||||||| ||  |
Sbjct: 26214 cccgatgctcacggctgttgccctaggtgacggtggcagtttcttcgacaagctccctaa 26155

                     
Query: 323   agcatggt 330
             ||||||||
Sbjct: 26154 agcatggt 26147



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                         
Query: 328   ggttcatctatttgttcattggtgttggtgctgttatcttcatcgtttctctgtttggct 387
             |||||||||||||||||||||||||||||||  |||||||  |  | ||||||||||| |
Sbjct: 25698 ggttcatctatttgttcattggtgttggtgcaattatctttgtgatctctctgtttggtt 25639

                                                      
Query: 388   gcattggagcagggacaaggaatacatgttgcttgtgttgt 428
             |||||||||| |  |||||||| || || ||||||||||||
Sbjct: 25638 gcattggagctgcaacaaggaacacctgctgcttgtgttgt 25598



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 433   ctttcttggtcatattattaatccttgctgaggctggaggtgctgcattcatattctt 490
             |||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||
Sbjct: 25022 ctttcttggtcatattgttgatccttgttgaggctggagctgctgcattcatattctt 24965



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 539   tttgatgccatgtatgactttctgaaagaaaactggaagattgcaaga 586
             |||||||  |||||||||||||| || ||||||||| |||||||||||
Sbjct: 24823 tttgatgtaatgtatgactttctcaaggaaaactgggagattgcaaga 24776
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>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0560B10, complete sequence
          Length = 108295

 Score =  222 bits (112), Expect = 1e-54
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                         
Query: 83    ggcgtgccggggattcttcgagtgcctgcttaggctgctcaactttttcctcaccgtcgc 142
             |||||||||||| |||||||| ||||| || | ||||||||||||| ||||||| |||||
Sbjct: 14304 ggcgtgccggggcttcttcgaatgcctactgaagctgctcaactttgtcctcacggtcgc 14245

                                                                         
Query: 143   cggccttgccatggtcggctatgggatctacctgctcgcggagtggatgaggatctccgg 202
             |||||| ||||||||||| |||||||| ||||||||||  |||||||||||||| |||||
Sbjct: 14244 cggcctcgccatggtcggatatgggatttacctgctcgtcgagtggatgaggatttccgg 14185

                                                                         
Query: 203   tggtggcggaggggcaccgccgtctccggccccgccggctgagttacttatgttcggccg 262
              || ||||| |||||||| ||||| || || ||||| |||||||| |||||||| |||||
Sbjct: 14184 cggcggcggcggggcaccaccgtcgccagcgccgcctgctgagttgcttatgtttggccg 14125

                                                                         
Query: 263   cccgatgctgacggtcgtggcccttggagagggcggcagtttcttcgacaagctacccga 322
             ||||||||| ||||  || ||||| || || || |||||||||||||||||||| ||  |
Sbjct: 14124 cccgatgctcacggctgttgccctaggtgacggtggcagtttcttcgacaagctccctaa 14065

                     
Query: 323   agcatggt 330
             ||||||||
Sbjct: 14064 agcatggt 14057



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                         
Query: 328   ggttcatctatttgttcattggtgttggtgctgttatcttcatcgtttctctgtttggct 387
             |||||||||||||||||||||||||||||||  |||||||  |  | ||||||||||| |
Sbjct: 13608 ggttcatctatttgttcattggtgttggtgcaattatctttgtgatctctctgtttggtt 13549

                                                      
Query: 388   gcattggagcagggacaaggaatacatgttgcttgtgttgt 428
             |||||||||| |  |||||||| || || ||||||||||||
Sbjct: 13548 gcattggagctgcaacaaggaacacctgctgcttgtgttgt 13508



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 433   ctttcttggtcatattattaatccttgctgaggctggaggtgctgcattcatattctt 490
             |||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||
Sbjct: 12932 ctttcttggtcatattgttgatccttgttgaggctggagctgctgcattcatattctt 12875



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 539   tttgatgccatgtatgactttctgaaagaaaactggaagattgcaaga 586
             |||||||  |||||||||||||| || ||||||||| |||||||||||
Sbjct: 12733 tttgatgtaatgtatgactttctcaaggaaaactgggagattgcaaga 12686
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>gb|AY111642.1| Zea mays CL34420_2 mRNA sequence
          Length = 601

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 548 atgtatgactttctgaaagaaaactggaagattgcaaga 586
           ||||||||||||||||| ||||||||| |||||||||||
Sbjct: 7   atgtatgactttctgaaggaaaactgggagattgcaaga 45
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>ref|NM_202223.1| Arabidopsis thaliana TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)
           AT1G32400 (TOM2A) transcript variant AT1G32400.2 mRNA,
           complete cds
          Length = 1501

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 589 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 642
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>ref|NM_102974.2| Arabidopsis thaliana TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)
           AT1G32400 (TOM2A) transcript variant AT1G32400.1 mRNA,
           complete cds
          Length = 1343

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 431 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 484
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>ref|NM_001036050.1| Arabidopsis thaliana TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)
           AT1G32400 (TOM2A) transcript variant AT1G32400.3 mRNA,
           complete cds
          Length = 1720

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 807 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 860
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>gb|AC103939.8| Mus musculus chromosome 18, clone RP23-300E7, complete sequence
          Length = 240406

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 441    gtcatattattaatccttgctg 462
              ||||||||||||||||||||||
Sbjct: 209105 gtcatattattaatccttgctg 209126
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>gb|AF334723.1| Arabidopsis thaliana clone C00117 (h) unknown protein (At1g32400)
           mRNA, complete cds
          Length = 843

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 215 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 268
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>gb|AF385687.1|AF385687 Arabidopsis thaliana At1g32400/F5D14_22 mRNA, complete cds
          Length = 1343

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 431 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 484
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>emb|BX814048.1|CNS0ADMF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB54ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1206

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 332 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 385
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>emb|BX817086.1|CNS0ADBV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH84ZH12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1407

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 592 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 645
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>emb|BX816778.1|CNS0AD9Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH67ZH02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1254

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 377 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 430
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>gb|AY088560.1| Arabidopsis thaliana clone 7849 mRNA, complete sequence
          Length = 1325

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 413 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 466
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>gb|AC104892.10| Mus musculus chromosome 18, clone RP23-262H4, complete sequence
          Length = 190380

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 441   gtcatattattaatccttgctg 462
             ||||||||||||||||||||||
Sbjct: 23674 gtcatattattaatccttgctg 23695
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>dbj|AB085684.1| Arabidopsis thaliana TOM2A mRNA for tobamovirus multiplication 2A,
           complete cds
          Length = 1293

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 304 tcttcgacaagctacccgaagcatggttcatctatttgttcattggtgttggtg 357
           |||| ||||| || ||| |||| |||||||| || |||||||||||| ||||||
Sbjct: 375 tctttgacaatcttcccaaagcgtggttcatatacttgttcattggtattggtg 428
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>gb|AC123941.3| Mus musculus BAC clone RP23-458G24 from chromosome 19, complete sequence
          Length = 182733

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 557    tttctgaaagaaaactggaag 577
              |||||||||||||||||||||
Sbjct: 119681 tttctgaaagaaaactggaag 119701
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>ref|XM_651771.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (7.t00023)
           partial mRNA
          Length = 1368

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 330 ttcatctatttgttcattggt 350
           |||||||||||||||||||||
Sbjct: 528 ttcatctatttgttcattggt 508
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>gb|AC108421.8| Mus musculus chromosome 19, clone RP23-433N7, complete sequence
          Length = 190980

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 557   tttctgaaagaaaactggaag 577
             |||||||||||||||||||||
Sbjct: 45410 tttctgaaagaaaactggaag 45430
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>emb|AL844223.9| Mouse DNA sequence from clone RP23-468N9 on chromosome 4, complete
             sequence
          Length = 61897

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 416   ttgcttgtgttgttattcttt 436
             |||||||||||||||||||||
Sbjct: 55986 ttgcttgtgttgttattcttt 56006
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>ref|NM_190194.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 525

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 344 cattggtgttggtgctgttatctt 367
           |||||||||||||| |||||||||
Sbjct: 334 cattggtgttggtgttgttatctt 311



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 345 attggtgttggtgctgttatcttc 368
           ||||||||||||| ||||||||||
Sbjct: 275 attggtgttggtgttgttatcttc 252
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>gb|AY735112.1| Streptomyces hygroscopicus mannopeptimycin biosynthetic gene cluster,
             complete sequence
          Length = 48200

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gggcaccgccgtctccggcc 233
             ||||||||||||||||||||
Sbjct: 12744 gggcaccgccgtctccggcc 12763
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>gb|AY506543.1| Rhodospirillum centenum apolipoprotein n-acyltransferase (cutE)
           gene, complete cds
          Length = 1047

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 gggcaccgccgtctccggcc 233
           ||||||||||||||||||||
Sbjct: 339 gggcaccgccgtctccggcc 320
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>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 230130

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   ttctttgaccatagttggaa 505
             ||||||||||||||||||||
Sbjct: 18138 ttctttgaccatagttggaa 18119
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>gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete sequence
          Length = 185995

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   aggaatacatgttgcttgtg 424
             ||||||||||||||||||||
Sbjct: 32368 aggaatacatgttgcttgtg 32387
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>gb|AY448033.1| Brassica napus cultivar SI271 S-locus receptor kinase (SRK) gene,
           complete cds
          Length = 1730

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gatctccggtggtggcggag 213
           ||||||||||||||||||||
Sbjct: 476 gatctccggtggtggcggag 495
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>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence
          Length = 211926

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 478   cattcatattctttgaccat 497
             ||||||||||||||||||||
Sbjct: 11276 cattcatattctttgaccat 11257
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>emb|AL132982.12|HSKB152G3 Human DNA sequence from clone KB-152G3 on chromosome 6 Contains the 3'
             end of the PARK2 gene for Parkinson disease (autosomal
             recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP),
             complete sequence
          Length = 91798

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 557   tttctgaaagaaaactggaa 576
             ||||||||||||||||||||
Sbjct: 17847 tttctgaaagaaaactggaa 17866
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>emb|AJ617485.1| Botryotinia fuckeliana Bcap5 gene for aspartic proteinase, exons 1-3
          Length = 2060

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  cgtctccggccccgccggct 242
            ||||||||||||||||||||
Sbjct: 1000 cgtctccggccccgccggct 1019
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>gb|AC094105.3| Homo sapiens chromosome 5 clone RP11-468D11, complete sequence
          Length = 186314

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   ttgtgttgttattctttctt 439
             ||||||||||||||||||||
Sbjct: 67894 ttgtgttgttattctttctt 67875
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>gb|AC024606.11| Homo sapiens chromosome 10 clone RP11-360I20, complete sequence
          Length = 186533

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 501  tggaaaagacgtaatttcca 520
            ||||||||||||||||||||
Sbjct: 3563 tggaaaagacgtaatttcca 3582
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>emb|AL116346.1|CNS01D42 Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cgtctccggccccgccggct 242
           ||||||||||||||||||||
Sbjct: 235 cgtctccggccccgccggct 254
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>emb|AL110734.1|CNS018S7 Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cgtctccggccccgccggct 242
           ||||||||||||||||||||
Sbjct: 235 cgtctccggccccgccggct 254
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 345      attggtgttggtgctgttatcttc 368
                ||||||||||||| ||||||||||
Sbjct: 38554902 attggtgttggtgttgttatcttc 38554925



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 344      cattggtgttggtgctgttatctt 367
                |||||||||||||| |||||||||
Sbjct: 38554843 cattggtgttggtgttgttatctt 38554866
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>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    attggtgttggtgctgttatcttc 368
              ||||||||||||| ||||||||||
Sbjct: 147984 attggtgttggtgttgttatcttc 148007



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 344    cattggtgttggtgctgttatctt 367
              |||||||||||||| |||||||||
Sbjct: 147925 cattggtgttggtgttgttatctt 147948
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>ref|XM_219401.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310035C23
           (predicted) (LOC309053), mRNA
          Length = 5399

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 459 gctgaggctggaggtgctgc 478
           ||||||||||||||||||||
Sbjct: 62  gctgaggctggaggtgctgc 81
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>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434C04
          Length = 150064

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 345   attggtgttggtgctgttatcttc 368
             ||||||||||||| ||||||||||
Sbjct: 75583 attggtgttggtgttgttatcttc 75606



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   cattggtgttggtgctgttatctt 367
             |||||||||||||| |||||||||
Sbjct: 75524 cattggtgttggtgttgttatctt 75547
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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1099D03
          Length = 191022

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 345   attggtgttggtgctgttatcttc 368
             ||||||||||||| ||||||||||
Sbjct: 12875 attggtgttggtgttgttatcttc 12898



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   cattggtgttggtgctgttatctt 367
             |||||||||||||| |||||||||
Sbjct: 12816 cattggtgttggtgttgttatctt 12839
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>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   tatgactttctgaaagaaaa 570
             ||||||||||||||||||||
Sbjct: 36169 tatgactttctgaaagaaaa 36188
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>emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-34O18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168991

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 565    agaaaactggaagattgcaa 584
              ||||||||||||||||||||
Sbjct: 120468 agaaaactggaagattgcaa 120449
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>emb|BX927216.16| Zebrafish DNA sequence from clone DKEY-179A6 in linkage group 19,
             complete sequence
          Length = 96929

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   gtttctctgtttggctgcat 391
             ||||||||||||||||||||
Sbjct: 50210 gtttctctgtttggctgcat 50191
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>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    cattcatattctttgaccat 497
              ||||||||||||||||||||
Sbjct: 113507 cattcatattctttgaccat 113488
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>emb|BX323457.7| Zebrafish DNA sequence from clone CH211-260B17 in linkage group 9,
             complete sequence
          Length = 172918

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    gtgttaatcaatttacagattgtg 49
             |||||| |||||||||||||||||
Sbjct: 54651 gtgttagtcaatttacagattgtg 54628
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>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete
            sequence
          Length = 251037

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 478  cattcatattctttgaccat 497
            ||||||||||||||||||||
Sbjct: 8369 cattcatattctttgaccat 8388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,399,381
Number of Sequences: 3902068
Number of extensions: 5399381
Number of successful extensions: 110137
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109884
Number of HSP's gapped (non-prelim): 245
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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