Clone Name | basd3o05 |
---|---|
Clone Library Name | barley_pub |
>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein (F-box only protein 1)| (AtFBX1) Length = 442 Score = 36.2 bits (82), Expect = 0.080 Identities = 27/103 (26%), Positives = 42/103 (40%) Frame = +1 Query: 40 YKVMWLRNDGNHEVYDSLQNMWFQPGEFPPSIKLPLALNFRSQPVAVGSTLYFMCSEPEG 219 Y V L ++ H ++W P L + V V Y M P Sbjct: 220 YAVKNLSSESFHVDAGGFFSLWAMTSSLPRLCSLE-----SGKMVYVQGKFYCMNYSPFS 274 Query: 220 VLSYDVSTGTWIHFIIPLPLHLTDHTLAEFQGKIMLVGLLCKN 348 VLSY+V+ WI P+ L +L E +G+++LV + K+ Sbjct: 275 VLSYEVTGNRWIKIQAPMRRFLRSPSLLESKGRLILVAAVEKS 317 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Frame = +2 Query: 299 LPSSRGRSCLWACCARTQR---PCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKH--MRM 463 L S+GR L A +++ + +W LQ+ W E++RMP +F + Sbjct: 301 LLESKGRLILVAAVEKSKLNVPKSLRLWSLQQDNATWVEIERMPQPLYTQFAAEEGGKGF 360 Query: 464 TCLGNSGLLMLSLKAKRMNRL 526 C+GN +M+ L+ + L Sbjct: 361 ECVGNQEFVMIVLRGTSLQLL 381
>KLDC5_MOUSE (Q8BFQ9) Kelch domain-containing protein 5| Length = 493 Score = 33.5 bits (75), Expect = 0.52 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = +1 Query: 37 GYKVMWLRNDGNHEVYDSLQNMWFQPGEFPPSIKLPLALNFRSQPVAVGSTLYFMCSEP- 213 GY++ H Y+ + N W Q NF+ VAV S LY + + Sbjct: 248 GYRITSQEISAAHS-YNPITNEWLQVASMNQKRS-----NFKL--VAVNSKLYAIGGQAV 299 Query: 214 EGVLSYDVSTGTWIHFIIPLPLHLTDHTLAEFQGKIMLVG 333 V Y+ W +F+ PLP L + + E +GKI ++G Sbjct: 300 SNVECYNPEQDAW-NFVAPLPNPLAEFSACECKGKIYVIG 338
>KLDC5_HUMAN (Q9P2K6) Kelch domain-containing protein 5| Length = 505 Score = 32.0 bits (71), Expect = 1.5 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 1/100 (1%) Frame = +1 Query: 37 GYKVMWLRNDGNHEVYDSLQNMWFQPGEFPPSIKLPLALNFRSQPVAVGSTLYFMCSEP- 213 GY++ H Y+ N W Q NF+ VAV S LY + + Sbjct: 260 GYRITSQEISAAHS-YNPSTNEWLQVASMNQKRS-----NFKL--VAVNSKLYAIGGQAV 311 Query: 214 EGVLSYDVSTGTWIHFIIPLPLHLTDHTLAEFQGKIMLVG 333 V Y+ W +F+ PLP L + + E +GKI ++G Sbjct: 312 SNVECYNPEQDAW-NFVAPLPNPLAEFSACECKGKIYVIG 350
>Y1321_METJA (Q58717) Hypothetical protein MJ1321| Length = 713 Score = 30.4 bits (67), Expect = 4.4 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%) Frame = +1 Query: 31 NEGYKVMWLRNDGNHEVYDSLQNMWFQPGEFPPSIKLPLALNFRSQPVAVGSTLYFMCSE 210 N +V+ +R + ++V+ S + G I LP F S PV + + L F C Sbjct: 589 NSNIEVISIRKNNKYKVFTSDYRIGSVFGN--DGIFLPHKTPFGSNPVKLSTWLRFNCGN 646 Query: 211 PEGV---------------LSYDVSTGTWIHFIIPLPLHLTD 291 EG+ ++Y G + IP P+H D Sbjct: 647 EEGLKINESIMQLLYDLTKMNYSALYGEGRYLRIPAPIHYAD 688
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 29.6 bits (65), Expect = 7.5 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = +1 Query: 37 GYKVMWLRNDGNHEVYDSL---QNMWFQPGEFPPSIKLPLALNFRSQPVAVGSTLYFMCS 207 GY+++W D +H Y + ++ WF G P + P A S F+ Sbjct: 76 GYQMLW---DADHNQYGASIPEESFWFANGTIPAGLYDPFEYKVPVNADASFSPTNFVL- 131 Query: 208 EPEGVLSYDVSTGTWIHFII 267 +G S D+ GT+ + II Sbjct: 132 --DGTASADIPAGTYDYVII 149
>YKKA_CAEEL (Q95QY7) Putative zinc finger protein C02F5.12| Length = 380 Score = 29.6 bits (65), Expect = 7.5 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Frame = +1 Query: 277 LHLTDHTLAEFQGKI--MLVGLLCKNAATLRLHLGVAEDDSPLEGGGQNA 420 L L DH L KI L G C N +R H A + +EG G A Sbjct: 257 LRLLDHALTHSNRKIPCKLCGFECTNVRRMRSHYAKAHPNERVEGYGMKA 306
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 29.6 bits (65), Expect = 7.5 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = +1 Query: 37 GYKVMWLRNDGNHEVYDSL---QNMWFQPGEFPPSIKLPLALNFRSQPVAVGSTLYFMCS 207 GY+++W D +H Y + ++ WF G P + P A S F+ Sbjct: 76 GYQMLW---DADHNQYGASIPEESFWFANGTIPAGLYDPFEYKVPVNADASFSPTNFVL- 131 Query: 208 EPEGVLSYDVSTGTWIHFII 267 +G S D+ GT+ + II Sbjct: 132 --DGTASADIPAGTYDYVII 149
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 29.3 bits (64), Expect = 9.8 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = -1 Query: 410 PPPSRGESSSATPRCRRRVAAFLHSR-----PTSMIFPWNSASVWSVRCSGSGM 264 PPPS SSSA+P R+ + SR P S +S++V S CS SG+ Sbjct: 3621 PPPSAAPSSSASPHASRKSWPPVGSRASAAKPPSFPPLSSSSTVTSSSCSTSGV 3674 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,082,459 Number of Sequences: 219361 Number of extensions: 2150391 Number of successful extensions: 5647 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5449 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5646 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)