ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3o03 |
|---|---|
| Clone Library Name | barley_pub |
>PA2G4_HUMAN (Q9UQ80) Proliferation-associated protein 2G4 (Cell cycle protein| p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1) Length = 393 Score = 107 bits (268), Expect = 2e-23 Identities = 60/129 (46%), Positives = 77/129 (59%), Gaps = 2/129 (1%) Frame = -3 Query: 589 KASRFIFSEISQKFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 413 K SR FSE+ ++F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G+ VA Sbjct: 259 KTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQF 318 Query: 412 KFTVLLMPNGSDKITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXXXXXXGD 236 KFTVLLMPNG +ITS P + L S+ DAE+KA L + Sbjct: 319 KFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAE 378 Query: 235 AAEAAEPME 209 A + E +E Sbjct: 379 NATSGETLE 387
>PA2G4_MOUSE (P50580) Proliferation-associated protein 2G4| (Proliferation-associated protein 1) (Protein p38-2G4) (Mpp1) (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) Length = 393 Score = 107 bits (267), Expect = 3e-23 Identities = 60/129 (46%), Positives = 77/129 (59%), Gaps = 2/129 (1%) Frame = -3 Query: 589 KASRFIFSEISQKFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 413 K SR FSE+ ++F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G+ VA Sbjct: 259 KTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQF 318 Query: 412 KFTVLLMPNGSDKITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXXXXXXGD 236 KFTVLLMPNG +ITS P + L S+ DAE+KA L + Sbjct: 319 KFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTVE 378 Query: 235 AAEAAEPME 209 A + E +E Sbjct: 379 NATSGETLE 387
>CDB4_SCHPO (Q09184) Curved DNA-binding protein (42 kDa protein)| Length = 381 Score = 61.6 bits (148), Expect = 2e-09 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 2/99 (2%) Frame = -3 Query: 589 KASRFIFSEISQKFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 413 +ASR ++SEI KF PF+ R + + R +GL EC +H+LL PY VL +K G +VA Sbjct: 262 QASRKVYSEIQTKFGPFPFSTRNISFDSRTNMGLNECTSHKLLFPYEVLLDKDGGIVAEF 321 Query: 412 KFTVLLMPNGSDKIT-SHPLQQLEPSKSIEDDAEIKAWL 299 T+ L G+ ++ S P + S +D EI A L Sbjct: 322 YSTIALTKKGTIILSDSEPKEDFIKSDKKVEDPEIVALL 360
>ARX1_SCHPO (O60180) Probable metalloprotease arx1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 417 Score = 49.3 bits (116), Expect = 8e-06 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%) Frame = -3 Query: 589 KASRFIFSEISQKFPIMPFTARALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIK 410 KASR + SEI ++ + PF +L +R LGL E + +L P PVL +++A + Sbjct: 303 KASRSLLSEIKKEKSVFPFHFGSLSSERNLLGLRELTDRHILVPMPVLISSPSNVIAREE 362 Query: 409 FTVLLMPNGSDKI----TSHPLQQLEPSKSIEDDAE 314 TV+ PN S + P ++ S+ED + Sbjct: 363 LTVITQPNPSSDLLCLTVPTPPSYVKSDFSLEDGTD 398
>AMPM_METJA (Q58725) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 294 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTAR-ALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKF 407 +R + IS+ +P +PF R L+ + RL L + + YP+L E++ +V + Sbjct: 221 ARKLLDVISKNYPYLPFAERWVLKNESERLALNSLIRASCIYGYPILKERENGIVGQAEH 280 Query: 406 TVLLMPNGSDKIT 368 T+L+ NG + T Sbjct: 281 TILITENGVEITT 293
>AMPM_METTH (O27355) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 299 Score = 40.8 bits (94), Expect = 0.003 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTARALEE----KRARLGLVECMNHELLQPYPVLHEKQGDLVAH 416 +R + +I +++ +PF R LEE KR + + + PY VL EK G +VA Sbjct: 223 ARRVLGKIREEYHALPFAQRWLEEYFDAKRLNASMRMLIQSRAIYPYHVLREKSGAMVAQ 282 Query: 415 IKFTVLLMPNGSDKIT 368 + TV++ +G IT Sbjct: 283 WEHTVIVEEDGCTVIT 298
>AMPM_PYRHO (O58362) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 35.4 bits (80), Expect = 0.12 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTARALE----EKRARLGLVECMNHELLQPYPVLHEKQGDLVAH 416 +RF+ ++I +++ +PF R L+ E + +L L L YPVL E +G +V Sbjct: 219 ARFLLAKIKREYKTLPFAYRWLQGEMPEGQLKLALRSLERSGALYGYPVLREIRGGMVTQ 278 Query: 415 IKFTVLL 395 + T+++ Sbjct: 279 FEHTIIV 285
>ARX1_YARLI (Q6CCY2) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 484 Score = 35.4 bits (80), Expect = 0.12 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = -3 Query: 589 KASRFIFSEISQKFPIMPFTARALEEK--RARLGLVECMNHELLQPYPVLHEKQGDLVAH 416 +ASR + S++ + PF +E +ARLGL E + H++L P PV K L A Sbjct: 331 QASRKLLSQLEATTSVYPFKLSHVESNVAKARLGLGEILAHQILVPIPVKVAKFVPLAAL 390 Query: 415 IKFT 404 +F+ Sbjct: 391 YEFS 394
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 33.5 bits (75), Expect = 0.47 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = -3 Query: 574 IFSEISQKFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFT 404 + + I++ F + F R L+ E + + L + ++QPYP L + +G V+ + T Sbjct: 363 LLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGSYVSQFEHT 422 Query: 403 VLLMP 389 +LL P Sbjct: 423 ILLRP 427
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 33.5 bits (75), Expect = 0.47 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Frame = -3 Query: 586 ASRFIFSEISQKFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAH 416 +++ + I + F +PF R L+ +++ L + H L+Q YP L++ G A Sbjct: 341 SAKNLLKTIDRNFGTLPFCRRYLDRLGQEKYLFALNNLVRHGLVQDYPPLNDIPGSYTAQ 400 Query: 415 IKFTVLL 395 + T+LL Sbjct: 401 FEHTILL 407
>AMPM_PYRAB (Q9UYT4) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 33.5 bits (75), Expect = 0.47 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 4/67 (5%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTARALE----EKRARLGLVECMNHELLQPYPVLHEKQGDLVAH 416 +RF+ ++I +++ +PF R L+ E + +L L L YPVL E + LV Sbjct: 219 ARFLLAKIKREYKTLPFAYRWLQGEMPEGQLKLALRTLEKSGALYGYPVLREIRNGLVTQ 278 Query: 415 IKFTVLL 395 + T+++ Sbjct: 279 FEHTIIV 285
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 33.1 bits (74), Expect = 0.62 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = -3 Query: 574 IFSEISQKFPIMPFTARALEEKR-ARLGLVECMN----HELLQPYPVLHEKQGDLVAHIK 410 ++ + F +PF+ R L+ G ++ +N L PYP L++ G VA + Sbjct: 280 VYEFVKSSFGTLPFSPRHLDHYNLVEGGSLKSVNLLTMMGLFTPYPPLNDIDGSKVAQFE 339 Query: 409 FTVLLMPNGSDKIT 368 TV L NG + +T Sbjct: 340 HTVYLSENGKEILT 353
>AMPM_PYRFU (P56218) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 32.7 bits (73), Expect = 0.81 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTARALE----EKRARLGLVECMNHELLQPYPVLHEKQGDLVAH 416 +RF+ ++I +++ +PF R L+ E + +L L + YPVL E + +VA Sbjct: 219 ARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQ 278 Query: 415 IKFTVLL 395 + T+++ Sbjct: 279 FEHTIIV 285
>MASS1_BRARE (Q6JAN0) Monogenic audiogenic seizure susceptibility protein 1| homolog precursor (Very large G-protein coupled receptor 1) Length = 6199 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 574 IFSEISQKFPIMPFTARALEEKRARLGLVECMNHELLQPYPVL 446 IF+++S KF +P TAR E+ R V + E +P P+L Sbjct: 2131 IFADVSVKFRAVPLTARVGEDYRVASSDVVLLEGESSKPVPIL 2173
>AMPM2_RAT (P38062) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 413 ++ + + I++ F + F R L+ E + + L + ++ PYP L + +G A Sbjct: 399 TKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQF 458 Query: 412 KFTVLLMPNGSDKIT 368 + T+LL P + ++ Sbjct: 459 EHTILLRPTCKEVVS 473
>AMPM2_MOUSE (O08663) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 413 ++ + + I++ F + F R L+ E + + L + ++ PYP L + +G A Sbjct: 399 TKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQF 458 Query: 412 KFTVLLMPNGSDKIT 368 + T+LL P + ++ Sbjct: 459 EHTILLRPTCKEVVS 473
>AMPM2_HUMAN (P50579) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Frame = -3 Query: 583 SRFIFSEISQKFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 413 ++ + + I++ F + F R L+ E + + L + ++ PYP L + +G A Sbjct: 399 TKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQF 458 Query: 412 KFTVLLMPNGSDKIT 368 + T+LL P + ++ Sbjct: 459 EHTILLRPTCKEVVS 473
>GUNB_NEOPA (Q12647) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 473 Score = 29.6 bits (65), Expect = 6.8 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 8/49 (16%) Frame = +3 Query: 342 GSNCCSGCDVILSDPFGINNTVNLMWA--------TRSPCFSWRTGYGC 464 G +CC+GC+V +D G N W T C+S + GY C Sbjct: 398 GYSCCNGCEVEYTDSDGEWGVENGNWCGIKSSCSNTSRICWSEKLGYPC 446 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,941,882 Number of Sequences: 219361 Number of extensions: 1472157 Number of successful extensions: 3532 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3529 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
