Clone Name | basd3n05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full insert sequence Length = 1188 Score = 392 bits (198), Expect = e-106 Identities = 315/350 (90%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 194 atgttcctcacgaggacggagtacgaccgcggggtgaacaccttctccccggaggggcgg 253 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcgggttg 193 |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 254 ttgttccaggtcgagtacgccattgaggccatcaagttggggtcaactgcgatcgggttg 313 Query: 194 aagacgaaaggatgggggttgttcttgctgtggagaaaacgtgtgacgtctccattgctg 253 ||||| || |||||| | |||| |||||||| |||||| |||||||| || ||| ||||| Sbjct: 314 aagaccaa-ggatggtg-ttgtccttgctgtagagaaa-cgtgtgacctcgccactgctg 370 Query: 254 gaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagt 313 ||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 371 gaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagt 430 Query: 314 ggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccat 373 ||||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 431 ggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccagaatcat 490 Query: 374 agattctcatatggggaaccgttgacagtcgagtccaccacacaagctat 423 || |||||||||||||| || ||||||| || || || ||||||||||| Sbjct: 491 aggttctcatatggggagccaatgacagtagaatctactacacaagctat 540
>dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C07, full insert sequence Length = 1056 Score = 392 bits (198), Expect = e-106 Identities = 315/350 (90%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 89 atgttcctcacgaggacggagtacgaccgcggggtgaacaccttctccccggaggggcgg 148 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcgggttg 193 |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 149 ttgttccaggtcgagtacgccattgaggccatcaagttggggtcaactgcgatcgggttg 208 Query: 194 aagacgaaaggatgggggttgttcttgctgtggagaaaacgtgtgacgtctccattgctg 253 ||||| || |||||| | |||| |||||||| |||||| |||||||| || ||| ||||| Sbjct: 209 aagaccaa-ggatggtg-ttgtccttgctgtagagaaa-cgtgtgacctcgccactgctg 265 Query: 254 gaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagt 313 ||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 266 gaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagt 325 Query: 314 ggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccat 373 ||||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 326 ggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccagaatcat 385 Query: 374 agattctcatatggggaaccgttgacagtcgagtccaccacacaagctat 423 || |||||||||||||| || ||||||| || || || ||||||||||| Sbjct: 386 aggttctcatatggggagccaatgacagtagaatctactacacaagctat 435
>dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mRNA for alpha 5 subunit of 20S proteasome, complete cds Length = 1056 Score = 392 bits (198), Expect = e-106 Identities = 315/350 (90%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 94 atgttcctcacgaggacggagtacgaccgcggggtgaacaccttctccccggaggggcgg 153 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcgggttg 193 |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 154 ttgttccaggtcgagtacgccattgaggccatcaagttggggtcaactgcgatcgggttg 213 Query: 194 aagacgaaaggatgggggttgttcttgctgtggagaaaacgtgtgacgtctccattgctg 253 ||||| || |||||| | |||| |||||||| |||||| |||||||| || ||| ||||| Sbjct: 214 aagaccaa-ggatggtg-ttgtccttgctgtagagaaa-cgtgtgacctcgccactgctg 270 Query: 254 gaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagt 313 ||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 271 gaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagt 330 Query: 314 ggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccat 373 ||||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 331 ggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccagaatcat 390 Query: 374 agattctcatatggggaaccgttgacagtcgagtccaccacacaagctat 423 || |||||||||||||| || ||||||| || || || ||||||||||| Sbjct: 391 aggttctcatatggggagccaatgacagtagaatctactacacaagctat 440
>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence Length = 1104 Score = 347 bits (175), Expect = 2e-92 Identities = 325/371 (87%), Gaps = 3/371 (0%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 197 atgtttctcacgaggacggagtacgaccgcggggtgaacaccttctcgccggaggggcgg 256 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcgggttg 193 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 257 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatccactgcgatcgggttg 316 Query: 194 aagacgaaaggatgggggttgttcttgctgtggagaaaacgtgtgacgtctccattgctg 253 || || ||||||| || ||||| |||||||| ||| ||||||||||| || ||| ||||| Sbjct: 317 aaaac-aaaggat-ggtgttgtccttgctgttgag-aaacgtgtgacctcgccactgctg 373 Query: 254 gaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagt 313 ||||| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 374 gaaccaagcagtgtggaaaaaatcatggaaattgatgagcacataggctgtgccatgagt 433 Query: 314 ggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccat 373 || |||||||||||||| |||||| | || |||||||||||||| || || || || ||| Sbjct: 434 gggcttattgctgatgctagaacactagtcgagcatgctcgtgttgaaactcagaatcat 493 Query: 374 agattctcatatggggaaccgttgacagtcgagtccaccacacaagctatttgcgatcta 433 || |||||||| ||||| || |||| || || || | |||||||||||||| || || Sbjct: 494 aggttctcatacggggagccaatgaccgtagaatcttcaacacaagctatttgtgactta 553 Query: 434 gctcttcgctt 444 ||||| ||||| Sbjct: 554 gctctgcgctt 564
>gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence Length = 1161 Score = 283 bits (143), Expect = 2e-73 Identities = 272/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Minus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 ||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 1055 atgtttctcacgaggacggagtacgaccgtggggtgaacaccttctctccggaggggcgg 996 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcgggttg 193 ||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||| ||| Sbjct: 995 ctgttcccggtcgagtacgccctcgaggccatcaagttgggatccactgcgatcggtttg 936 Query: 194 aagacgaaaggatgggggttgttcttgctgtggagaaaacgtgtgacgtctccattgctg 253 ||||| ||||||| || ||||| || || || ||| ||||||||||| || || ||||| Sbjct: 935 aagac-aaaggat-ggtgttgtcctcgccgttgag-aaacgtgtgacctcacccctgctg 879 Query: 254 gaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagt 313 ||||| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 878 gaaccaagcagtgtggaaaaaataatggaaattgatgagcacataggctgtgccatgagt 819 Query: 314 ggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccat 373 || |||||||||||||| |||||| | || || ||||||||||| || || || || ||| Sbjct: 818 ggacttattgctgatgctagaacactagtggaacatgctcgtgttgaaactcagaatcat 759 Query: 374 agattctcata 384 || |||||||| Sbjct: 758 aggttctcata 748
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 210 bits (106), Expect = 3e-51 Identities = 175/194 (90%), Gaps = 3/194 (1%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 ||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 300 atgtttctcacgaggacggagtacgaccgtggggtgaacaccttctctccggaggggcgg 359 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcgggttg 193 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 360 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatccactgcgatcggtttg 419 Query: 194 aagacgaaaggatgggggttgttcttgctgtggagaaaacgtgtgacgtctccattgctg 253 ||||| ||||||| || ||||| || || || ||| ||||||||||| || ||| ||||| Sbjct: 420 aagac-aaaggat-ggtgttgtcctcgccgttgag-aaacgtgtgacctcaccactgctg 476 Query: 254 gaacctagcagtgt 267 ||||| |||||||| Sbjct: 477 gaaccaagcagtgt 490 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Plus Query: 317 cttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccataga 376 |||||||||||||| |||||| | || || ||||||||||| || || || || ||||| Sbjct: 540 cttattgctgatgctagaacactagtggaacatgctcgtgttgaaactcagaatcatagg 599 Query: 377 ttctcata 384 |||||||| Sbjct: 600 ttctcata 607
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 155 bits (78), Expect = 1e-34 Identities = 105/114 (92%) Strand = Plus / Minus Query: 253 ggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgag 312 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 102718 ggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgag 102659 Query: 313 tggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagaccca 366 |||||||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 102658 tggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaaccca 102605 Score = 143 bits (72), Expect = 6e-31 Identities = 81/84 (96%) Strand = Plus / Minus Query: 86 aggacggagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtc 145 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 104159 aggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtc 104100 Query: 146 gagtacgccatcgaggccatcaag 169 ||||||||||| |||||||||||| Sbjct: 104099 gagtacgccattgaggccatcaag 104076 Score = 46.1 bits (23), Expect = 0.097 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 168 agttgggatctactgcaatcgggttgaagacgaaaggatgggggttgttcttgctgtgga 227 ||||||| || ||||| |||||||||||||| |||||| || ||||| |||||||| || Sbjct: 103751 agttggggtcaactgcgatcgggttgaagac-caaggat-ggtgttgtccttgctgtaga 103694 Query: 228 gaaaacgtgtgacgtctccattgctgg 254 | ||||||||||| || ||| |||||| Sbjct: 103693 g-aaacgtgtgacctcgccactgctgg 103668 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 371 catagattctcatatggggaaccgttgacagtcgagtccaccacacaagctat 423 ||||| |||||||||||||| || ||||||| || || || ||||||||||| Sbjct: 102519 cataggttctcatatggggagccaatgacagtagaatctactacacaagctat 102467
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 155 bits (78), Expect = 1e-34 Identities = 105/114 (92%) Strand = Plus / Minus Query: 253 ggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgag 312 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 23086715 ggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgag 23086656 Query: 313 tggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagaccca 366 |||||||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 23086655 tggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaaccca 23086602 Score = 143 bits (72), Expect = 6e-31 Identities = 81/84 (96%) Strand = Plus / Minus Query: 86 aggacggagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtc 145 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 23088156 aggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtc 23088097 Query: 146 gagtacgccatcgaggccatcaag 169 ||||||||||| |||||||||||| Sbjct: 23088096 gagtacgccattgaggccatcaag 23088073 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 128 gggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||| ||||||||||||||||| ||||| |||| ||||||| Sbjct: 11307999 gggcgtctgttccaggtcgagtatgccattgaggtcatcaag 11308040 Score = 46.1 bits (23), Expect = 0.097 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 168 agttgggatctactgcaatcgggttgaagacgaaaggatgggggttgttcttgctgtgga 227 ||||||| || ||||| |||||||||||||| |||||| || ||||| |||||||| || Sbjct: 23087748 agttggggtcaactgcgatcgggttgaagac-caaggat-ggtgttgtccttgctgtaga 23087691 Query: 228 gaaaacgtgtgacgtctccattgctgg 254 | ||||||||||| || ||| |||||| Sbjct: 23087690 g-aaacgtgtgacctcgccactgctgg 23087665 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 371 catagattctcatatggggaaccgttgacagtcgagtccaccacacaagctat 423 ||||| |||||||||||||| || ||||||| || || || ||||||||||| Sbjct: 23086516 cataggttctcatatggggagccaatgacagtagaatctactacacaagctat 23086464
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 155 bits (78), Expect = 1e-34 Identities = 105/114 (92%) Strand = Plus / Minus Query: 253 ggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgag 312 |||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 23396625 ggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgag 23396566 Query: 313 tggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagaccca 366 |||||||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 23396565 tggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaaccca 23396512 Score = 143 bits (72), Expect = 6e-31 Identities = 81/84 (96%) Strand = Plus / Minus Query: 86 aggacggagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtc 145 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 23398066 aggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtc 23398007 Query: 146 gagtacgccatcgaggccatcaag 169 ||||||||||| |||||||||||| Sbjct: 23398006 gagtacgccattgaggccatcaag 23397983 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 128 gggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||| ||||||||||||||||| ||||| |||| ||||||| Sbjct: 11387188 gggcgtctgttccaggtcgagtatgccattgaggtcatcaag 11387229 Score = 46.1 bits (23), Expect = 0.097 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 168 agttgggatctactgcaatcgggttgaagacgaaaggatgggggttgttcttgctgtgga 227 ||||||| || ||||| |||||||||||||| |||||| || ||||| |||||||| || Sbjct: 23397658 agttggggtcaactgcgatcgggttgaagac-caaggat-ggtgttgtccttgctgtaga 23397601 Query: 228 gaaaacgtgtgacgtctccattgctgg 254 | ||||||||||| || ||| |||||| Sbjct: 23397600 g-aaacgtgtgacctcgccactgctgg 23397575 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 371 catagattctcatatggggaaccgttgacagtcgagtccaccacacaagctat 423 ||||| |||||||||||||| || ||||||| || || || ||||||||||| Sbjct: 23396426 cataggttctcatatggggagccaatgacagtagaatctactacacaagctat 23396374
>gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence Length = 1354 Score = 119 bits (60), Expect = 8e-24 Identities = 114/132 (86%) Strand = Plus / Plus Query: 253 ggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgag 312 |||||| |||||||| || ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 583 ggaaccaagcagtgtggaaaaaataatggaaattgatgagcacataggctgtgccatgag 642 Query: 313 tggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaacca 372 ||| |||||||||||||| |||||| | || || ||||||||||| || || || || || Sbjct: 643 tggacttattgctgatgctagaacactagtggaacatgctcgtgttgaaactcagaatca 702 Query: 373 tagattctcata 384 ||| |||||||| Sbjct: 703 taggttctcata 714
>ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G53850 (PAE1) mRNA, complete cds Length = 1006 Score = 115 bits (58), Expect = 1e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 239 acgtctccattgctggaacctagcagtgttgagaaaattatggaaattgatgagcatgta 298 ||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||| | Sbjct: 278 acgtcgccattgctggaaccgagcagtgtggagaagattatggaaattgatgaccatatt 337 Query: 299 ggctgtgccatgagtggccttattgctgatgcaagaacattggttgagcatgctcgtgtg 358 || ||||| ||||| || | |||||||| || | ||| | |||||||||||| | || Sbjct: 338 ggttgtgctatgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagtt 397 Query: 359 gagacccaaaaccatagattctcatatggggaaccgttgacagtcgagtccaccacacaa 418 || || ||||||||||||||||| ||||| || ||| |||| || |||||||| |||||| Sbjct: 398 gaaactcaaaaccatagattctcgtatggtgagccgatgactgtagagtccacaacacaa 457 Query: 419 gc 420 || Sbjct: 458 gc 459
>gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 869 Score = 115 bits (58), Expect = 1e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 239 acgtctccattgctggaacctagcagtgttgagaaaattatggaaattgatgagcatgta 298 ||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||| | Sbjct: 163 acgtcgccattgctggaaccgagcagtgtggagaagattatggaaattgatgaccatatt 222 Query: 299 ggctgtgccatgagtggccttattgctgatgcaagaacattggttgagcatgctcgtgtg 358 || ||||| ||||| || | |||||||| || | ||| | |||||||||||| | || Sbjct: 223 ggttgtgctatgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagtt 282 Query: 359 gagacccaaaaccatagattctcatatggggaaccgttgacagtcgagtccaccacacaa 418 || || ||||||||||||||||| ||||| || ||| |||| || |||||||| |||||| Sbjct: 283 gaaactcaaaaccatagattctcgtatggtgagccgatgactgtagagtccacaacacaa 342 Query: 419 gc 420 || Sbjct: 343 gc 344
>gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 1003 Score = 115 bits (58), Expect = 1e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 239 acgtctccattgctggaacctagcagtgttgagaaaattatggaaattgatgagcatgta 298 ||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||| | Sbjct: 276 acgtcgccattgctggaaccgagcagtgtggagaagattatggaaattgatgaccatatt 335 Query: 299 ggctgtgccatgagtggccttattgctgatgcaagaacattggttgagcatgctcgtgtg 358 || ||||| ||||| || | |||||||| || | ||| | |||||||||||| | || Sbjct: 336 ggttgtgctatgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagtt 395 Query: 359 gagacccaaaaccatagattctcatatggggaaccgttgacagtcgagtccaccacacaa 418 || || ||||||||||||||||| ||||| || ||| |||| || |||||||| |||||| Sbjct: 396 gaaactcaaaaccatagattctcgtatggtgagccgatgactgtagagtccacaacacaa 455 Query: 419 gc 420 || Sbjct: 456 gc 457
>gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete sequence Length = 1006 Score = 115 bits (58), Expect = 1e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 239 acgtctccattgctggaacctagcagtgttgagaaaattatggaaattgatgagcatgta 298 ||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||| | Sbjct: 278 acgtcgccattgctggaaccgagcagtgtggagaagattatggaaattgatgaccatatt 337 Query: 299 ggctgtgccatgagtggccttattgctgatgcaagaacattggttgagcatgctcgtgtg 358 || ||||| ||||| || | |||||||| || | ||| | |||||||||||| | || Sbjct: 338 ggttgtgctatgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagtt 397 Query: 359 gagacccaaaaccatagattctcatatggggaaccgttgacagtcgagtccaccacacaa 418 || || ||||||||||||||||| ||||| || ||| |||| || |||||||| |||||| Sbjct: 398 gaaactcaaaaccatagattctcgtatggtgagccgatgactgtagagtccacaacacaa 457 Query: 419 gc 420 || Sbjct: 458 gc 459
>gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subunit PAE1 (PAE1) mRNA, complete cds Length = 1005 Score = 115 bits (58), Expect = 1e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 239 acgtctccattgctggaacctagcagtgttgagaaaattatggaaattgatgagcatgta 298 ||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||| | Sbjct: 256 acgtcgccattgctggaaccgagcagtgtggagaagattatggaaattgatgaccatatt 315 Query: 299 ggctgtgccatgagtggccttattgctgatgcaagaacattggttgagcatgctcgtgtg 358 || ||||| ||||| || | |||||||| || | ||| | |||||||||||| | || Sbjct: 316 ggttgtgctatgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagtt 375 Query: 359 gagacccaaaaccatagattctcatatggggaaccgttgacagtcgagtccaccacacaa 418 || || ||||||||||||||||| ||||| || ||| |||| || |||||||| |||||| Sbjct: 376 gaaactcaaaaccatagattctcgtatggtgagccgatgactgtagagtccacaacacaa 435 Query: 419 gc 420 || Sbjct: 436 gc 437
>gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, complete cds Length = 966 Score = 105 bits (53), Expect = 1e-19 Identities = 152/185 (82%) Strand = Plus / Plus Query: 251 ctggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatg 310 ||||| ||||| |||||||||||||||||||||||||||||||| | || ||||| ||| Sbjct: 188 ctggagcctagtagtgttgagaaaattatggaaattgatgagcacatcggttgtgcaatg 247 Query: 311 agtggccttattgctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaac 370 ||||| | ||||| ||||| ||||| | ||||||||||| || ||||| || || || Sbjct: 248 agtgggttgattgcagatgctcgaacacttgttgagcatgcacgggtggaaactcagaat 307 Query: 371 catagattctcatatggggaaccgttgacagtcgagtccaccacacaagctatttgcgat 430 || || ||||| ||||| || || |||| || ||||||||||| |||||| |||| ||| Sbjct: 308 cacaggttctcctatggtgagcctatgactgttgagtccaccacccaagctctttgtgat 367 Query: 431 ctagc 435 ||||| Sbjct: 368 ctagc 372 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 ||||| ||||| ||||| ||||| ||||| || || |||||||| || || || || || Sbjct: 14 atgtttctcacaaggactgagtatgaccgaggagtcaacaccttttctcccgaaggccgt 73 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcgggttg 193 |||| ||||| ||||| || ||||| ||||||||| ||||||| ||||| || |||||| Sbjct: 74 ttgtttcaggttgagtatgcaatcgaagccatcaagctgggatcaactgcgattgggttg 133 Query: 194 aagacgaaag 203 ||||| |||| Sbjct: 134 aagaccaaag 143
>ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ peptidase/ threonine endopeptidase AT3G14290 (PAE2) mRNA, complete cds Length = 1023 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 291 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 350 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccatagattctca 382 ||||| || ||||| | ||||||||||| || || |||||||| ||||| || ||||| Sbjct: 351 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 410 Query: 383 tatgg 387 ||||| Sbjct: 411 tatgg 415
>gb|DQ214008.1| Taeniopygia guttata clone 0064P0007F03 proteasome alpha 5 subunit variant 1-like mRNA, complete sequence Length = 1055 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 65 cgcgccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccg 124 |||||| |||||||||||||| | | ||||||||||| || |||||||| ||||| ||| Sbjct: 109 cgcgccgccatgttcctcacgcgctccgagtacgaccggggtgtgaacacgttctctccg 168 Query: 125 gaggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 |||||| |||| |||||||| || || |||||||||||||||||| Sbjct: 169 gaggggaggctcttccaggtggaatatgccatcgaggccatcaag 213 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 302 tgtgccatgagtggccttattgctgatgcaa 332 ||||||||||||||||| || |||||||||| Sbjct: 343 tgtgccatgagtggcctaatagctgatgcaa 373
>gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 745 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 187 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 246 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccatagattctca 382 ||||| || ||||| | ||||||||||| || || |||||||| ||||| || ||||| Sbjct: 247 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 306 Query: 383 tatgg 387 ||||| Sbjct: 307 tatgg 311
>gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 987 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 290 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 349 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccatagattctca 382 ||||| || ||||| | ||||||||||| || || |||||||| ||||| || ||||| Sbjct: 350 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 409 Query: 383 tatgg 387 ||||| Sbjct: 410 tatgg 414
>emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 265 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 324 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccatagattctca 382 ||||| || ||||| | ||||||||||| || || |||||||| ||||| || ||||| Sbjct: 325 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 384 Query: 383 tatgg 387 ||||| Sbjct: 385 tatgg 389
>emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 225 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 284 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccatagattctca 382 ||||| || ||||| | ||||||||||| || || |||||||| ||||| || ||||| Sbjct: 285 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 344 Query: 383 tatgg 387 ||||| Sbjct: 345 tatgg 349
>gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subunit PAE2 (PAE2) mRNA, complete cds Length = 983 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 229 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 288 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccatagattctca 382 ||||| || ||||| | ||||||||||| || || |||||||| ||||| || ||||| Sbjct: 289 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 348 Query: 383 tatgg 387 ||||| Sbjct: 349 tatgg 353
>ref|NM_001031407.1| Gallus gallus proteasome (prosome, macropain) subunit, alpha type, 5 (PSMA5), mRNA Length = 1047 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 70 caccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggg 129 ||||||||| |||||| | | ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 101 caccatgtttctcacgcgctctgagtacgaccggggcgtgaacactttctctccggaggg 160 Query: 130 gcggctgttccaggtcgagtacgccatcgaggccat 165 | |||||||||| || ||||| |||||||||||||| Sbjct: 161 gaggctgttccaagtggagtatgccatcgaggccat 196
>emb|AJ720305.1| Gallus gallus mRNA for hypothetical protein, clone 14i9 Length = 1047 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 70 caccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggg 129 ||||||||| |||||| | | ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 101 caccatgtttctcacgcgctctgagtacgaccggggcgtgaacactttctctccggaggg 160 Query: 130 gcggctgttccaggtcgagtacgccatcgaggccat 165 | |||||||||| || ||||| |||||||||||||| Sbjct: 161 gaggctgttccaagtggagtatgccatcgaggccat 196
>emb|CR386956.1| Gallus gallus finished cDNA, clone ChEST102f7 Length = 769 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 70 caccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggg 129 ||||||||| |||||| | | ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 112 caccatgtttctcacgcgctctgagtacgaccggggcgtgaacactttctctccggaggg 171 Query: 130 gcggctgttccaggtcgagtacgccatcgaggccat 165 | |||||||||| || ||||| |||||||||||||| Sbjct: 172 gaggctgttccaagtggagtatgccatcgaggccat 207
>gb|BT014224.1| Lycopersicon esculentum clone 133419F, mRNA sequence Length = 1119 Score = 93.7 bits (47), Expect = 5e-16 Identities = 207/258 (80%), Gaps = 3/258 (1%) Strand = Plus / Plus Query: 164 atcaagttgggatctactgcaatcgggttgaagacgaaaggatgggggttgttcttgctg 223 ||||||||||| || |||||||| || |||||||| || | | || ||||||||||||| Sbjct: 156 atcaagttgggttcaactgcaattggattgaagactaaggaa--ggagttgttcttgctg 213 Query: 224 tggagaaaacgtgtgacgtctccattgctggaacctagcagtgttgagaaaattatggaa 283 ||||||| || | || || ||| | ||||| || |||||||| ||||||||||||||| Sbjct: 214 tggagaag-cgcattacttcaccacttctggagccaagcagtgtggagaaaattatggaa 272 Query: 284 attgatgagcatgtaggctgtgccatgagtggccttattgctgatgcaagaacattggtt 343 || || |||||| | |||||||| |||||||| | || ||||||||| ||||| | || Sbjct: 273 atcgacgagcatattggctgtgcaatgagtggattgatagctgatgcacgaacacttgtg 332 Query: 344 gagcatgctcgtgtggagacccaaaaccatagattctcatatggggaaccgttgacagtc 403 || ||||| || || || || || |||||||||||||| ||||| || || |||| || Sbjct: 333 gaacatgcacgggttgaaactcagaaccatagattctcttatggcgagcccatgactgtt 392 Query: 404 gagtccaccacacaagct 421 |||||||| || |||||| Sbjct: 393 gagtccactacccaagct 410
>gb|DQ214009.1| Taeniopygia guttata clone 0061P0007F09 proteasome alpha 5 subunit variant 1-like mRNA, complete sequence Length = 1034 Score = 89.7 bits (45), Expect = 7e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 65 cgcgccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccg 124 |||||| |||||||||||||| | | ||||||||||| || |||||||| ||||| ||| Sbjct: 89 cgcgccgccatgttcctcacgcgctccgagtacgaccggggtgtgaacacgttctctccg 148 Query: 125 gaggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 |||||| | || |||||||| || || |||||||||||||||||| Sbjct: 149 gaggggagactcttccaggtggaatatgccatcgaggccatcaag 193 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 302 tgtgccatgagtggccttattgctgatgcaa 332 ||||||||||||||||| || |||||||||| Sbjct: 324 tgtgccatgagtggcctaatagctgatgcaa 354
>emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 868 Score = 89.7 bits (45), Expect = 7e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 225 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 284 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagacccaaaaccatagattctca 382 ||||| || ||||| | || |||||||| || || |||||||| ||||| || ||||| Sbjct: 285 gctgacgcgcgaacacttgtagagcatgcacgagtagagacccagaaccacaggttctcg 344 Query: 383 tatgg 387 ||||| Sbjct: 345 tatgg 349
>emb|AJ291735.1|NTA291735 Nicotiana tabacum partial mRNA for putative alpha5 proteasome subunit (a5 gene) Length = 315 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 242 tctccattgctggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggc 301 |||||| | ||||| || |||||||| ||||||||||||||||||||||||||| | ||| Sbjct: 44 tctccacttctggagccaagcagtgtggagaaaattatggaaattgatgagcatattggc 103 Query: 302 tgtgccatgagtggccttattgctgatgcaag 333 ||||| |||||||| | || ||||||||||| Sbjct: 104 tgtgcgatgagtggattgatagctgatgcaag 135
>emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 409 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 468 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagaccca 366 ||||| || ||||| | ||||||||||| || || |||||||| Sbjct: 469 gctgacgcgcgaacacttgttgagcatgcacgagtagagaccca 512
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21 Length = 83906 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 29264 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 29323 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagaccca 366 ||||| || ||||| | ||||||||||| || || |||||||| Sbjct: 29324 gctgacgcgcgaacacttgttgagcatgcacgagtagagaccca 29367
>emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 844 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 263 agtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttatt 322 ||||||||||| ||||||||||||||||| ||| |||| ||||| |||||||| || ||| Sbjct: 210 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 269 Query: 323 gctgatgcaagaacattggttgagcatgctcgtgtggagaccc 365 ||||| || ||||| | ||||||||||| || || ||||||| Sbjct: 270 gctgacgcgcgaacacttgttgagcatgcacgagtagagaccc 312
>gb|AY232148.1| Drosophila yakuba clone yak-ad_ProsMA5 mRNA sequence Length = 555 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 ||||||||| | ||||||||||||||||| |||||||| || || ||||| || || ||| Sbjct: 19 gagtacgacagaggcgtgaacaccttctcgccggagggccgcctcttccaagtggaatac 78 Query: 152 gccatcgaggccatcaagttggg 174 ||||| ||||||||||| ||||| Sbjct: 79 gccattgaggccatcaaattggg 101
>ref|NM_166221.2| Drosophila melanogaster Proteasome subunit CG10938-RA, transcript variant A (ProsMA5), mRNA Length = 884 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 69 ccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggagg 128 |||||||||| |||||| | | ||||||||| | ||||||||||||||||| ||||||| Sbjct: 72 ccaccatgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagg 131 Query: 129 ggcggctgttccaggtcgagtacgccatcgaggccatcaagttggg 174 | || || ||||| || || || ||||| ||||||||||| ||||| Sbjct: 132 gccgcctcttccaagtggaatatgccattgaggccatcaaattggg 177
>ref|NM_057854.3| Drosophila melanogaster Proteasome subunit CG10938-RB, transcript variant B (ProsMA5), mRNA Length = 885 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 69 ccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggagg 128 |||||||||| |||||| | | ||||||||| | ||||||||||||||||| ||||||| Sbjct: 68 ccaccatgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagg 127 Query: 129 ggcggctgttccaggtcgagtacgccatcgaggccatcaagttggg 174 | || || ||||| || || || ||||| ||||||||||| ||||| Sbjct: 128 gccgcctcttccaagtggaatatgccattgaggccatcaaattggg 173
>gb|AY061404.1| Drosophila melanogaster LD33318 full length cDNA Length = 888 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 69 ccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggagg 128 |||||||||| |||||| | | ||||||||| | ||||||||||||||||| ||||||| Sbjct: 63 ccaccatgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagg 122 Query: 129 ggcggctgttccaggtcgagtacgccatcgaggccatcaagttggg 174 | || || ||||| || || || ||||| ||||||||||| ||||| Sbjct: 123 gccgcctcttccaagtggaatatgccattgaggccatcaaattggg 168
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 69 ccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggagg 128 |||||||||| |||||| | | ||||||||| | ||||||||||||||||| ||||||| Sbjct: 127396 ccaccatgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagg 127455 Query: 129 ggcggctgttccaggtcgagtacgccatcgaggccatcaagttggg 174 | || || ||||| || || || ||||| ||||||||||| ||||| Sbjct: 127456 gccgcctcttccaagtggaatatgccattgaggccatcaaattggg 127501
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 69 ccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggagg 128 |||||||||| |||||| | | ||||||||| | ||||||||||||||||| ||||||| Sbjct: 4397 ccaccatgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagg 4456 Query: 129 ggcggctgttccaggtcgagtacgccatcgaggccatcaagttggg 174 | || || ||||| || || || ||||| ||||||||||| ||||| Sbjct: 4457 gccgcctcttccaagtggaatatgccattgaggccatcaaattggg 4502
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 69 ccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggagg 128 |||||||||| |||||| | | ||||||||| | ||||||||||||||||| ||||||| Sbjct: 147414 ccaccatgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagg 147473 Query: 129 ggcggctgttccaggtcgagtacgccatcgaggccatcaagttggg 174 | || || ||||| || || || ||||| ||||||||||| ||||| Sbjct: 147474 gccgcctcttccaagtggaatatgccattgaggccatcaaattggg 147519
>gb|U64721.1|DMU64721 Drosophila melanogaster 20S proteasome alpha subunit PSMA5 gene, complete cds Length = 1062 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 69 ccaccatgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggagg 128 |||||||||| |||||| | | ||||||||| | ||||||||||||||||| ||||||| Sbjct: 141 ccaccatgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagg 200 Query: 129 ggcggctgttccaggtcgagtacgccatcgaggccatcaagttggg 174 | || || ||||| || || || ||||| ||||||||||| ||||| Sbjct: 201 gccgcctcttccaagtggaatatgccattgaggccatcaaattggg 246
>emb|BX063332.1|CNS09L14 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1010 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 112 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 171 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 172 gccatcgaggcgatcaa 188
>emb|BX062751.1|CNS09KKZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44AG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1022 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 16 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 75 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 76 gccatcgaggcgatcaa 92
>emb|BX056699.1|CNS09FWV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC36AG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 100 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 159 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 160 gccatcgaggcgatcaa 176
>emb|BX031436.1|CNS08WF4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46DE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 844 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 90 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 149 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 150 gccatcgaggcgatcaa 166
>emb|BX019821.1|CNS08NGH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 903 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 133 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 192 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 193 gccatcgaggcgatcaa 209
>emb|BX017936.1|CNS08M04 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1005 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 107 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 166 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 167 gccatcgaggcgatcaa 183
>emb|BX018241.1|CNS08M8L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27CF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 886 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 110 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 169 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 170 gccatcgaggcgatcaa 186
>emb|BX015753.1|CNS08KBH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23CF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 319 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 94 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 153 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 154 gccatcgaggcgatcaa 170
>emb|BX011882.1|CNS08HBY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA18DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1025 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 1025 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 966 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 965 gccatcgaggcgatcaa 949
>emb|BX011881.1|CNS08HBX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 902 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 77 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 136 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 137 gccatcgaggcgatcaa 153
>emb|BX011202.1|CNS08GT2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17DF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 941 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 123 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 182 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 183 gccatcgaggcgatcaa 199
>emb|BX010636.1|CNS08GDC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17AD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 971 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 129 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 188 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 189 gccatcgaggcgatcaa 205
>emb|BX009604.1|CNS08FKO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15CB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 83 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 142 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 143 gccatcgaggcgatcaa 159
>ref|XM_314945.2| Anopheles gambiae str. PEST ENSANGP00000019329 (ENSANGG00000016840), mRNA Length = 1160 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 132 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 191 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 192 gccatcgaggcgatcaa 208
>emb|BX066418.1|CNS09NEU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC5CH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 768 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctccccggaggggcggctgttccaggtcgagtac 151 |||||||| || || |||||||||||||| || || || || ||||||||||| ||||| Sbjct: 19 gagtacgatcgtggagtgaacaccttctcgcccgatggtcgtctgttccaggttgagtat 78 Query: 152 gccatcgaggccatcaa 168 ||||||||||| ||||| Sbjct: 79 gccatcgaggcgatcaa 95
>gb|BT017945.1| Zea mays clone EL01N0521D09.c mRNA sequence Length = 1171 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 126 aggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 160 aggggcggctgttccaggtggagtacgccatggaggccgtcaag 203
>ref|XM_367205.1| Magnaporthe grisea 70-15 hypothetical protein (MG07130.4) partial mRNA Length = 738 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 110 aacaccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||||||||||||||| || || || ||||||||||| ||| || |||||||||||||| Sbjct: 37 aacaccttctccccggaaggtcgtctcttccaggtcgaatactccctcgaggccatcaag 96
>gb|AY104937.1| Zea mays PCO082324 mRNA sequence Length = 1160 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 126 aggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 190 aggggcggctgttccaggtggagtacgccatggaggccgtcaag 233
>ref|XM_464030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 121 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 163 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 136 cccggcggggcggctgttccaggtggagtacgccatggaggcc 178
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 121 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 163 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 1784747 cccggcggggcggctgttccaggtggagtacgccatggaggcc 1784789
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 121 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 163 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 102759 cccggcggggcggctgttccaggtggagtacgccatggaggcc 102801
>dbj|AK109376.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D06, full insert sequence Length = 1080 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 121 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 163 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 119 cccggcggggcggctgttccaggtggagtacgccatggaggcc 161
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 121 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 163 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 21391 cccggcggggcggctgttccaggtggagtacgccatggaggcc 21433
>dbj|AK103646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135B19, full insert sequence Length = 1079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 121 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 163 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 136 cccggcggggcggctgttccaggtggagtacgccatggaggcc 178
>dbj|D37886.1|RICPC2SA Rice mRNA for proteasome C2 subunit, complete cds Length = 1045 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 121 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 163 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 121 cccggcggggcggctgttccaggtggagtacgccatggaggcc 163
>gb|AF424643.1| Phytophthora infestans clone MY-03-E-06 proteasome subunit mRNA, complete cds Length = 911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 112 caccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaa 168 ||||||||||||||| || || || |||||||| || |||||||| ||||||||||| Sbjct: 58 caccttctccccggaaggccgactcttccaggtggaatacgccatggaggccatcaa 114
>ref|XM_956973.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 110 aacaccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 |||||||||||||| || || || || ||||| ||||||||| || |||||||||||||| Sbjct: 37 aacaccttctcccccgaaggccgcctcttccaagtcgagtactccctcgaggccatcaag 96
>ref|XM_324651.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 110 aacaccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 |||||||||||||| || || || || ||||| ||||||||| || |||||||||||||| Sbjct: 37 aacaccttctcccccgaaggccgcctcttccaagtcgagtactccctcgaggccatcaag 96
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 253 ggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatgag 312 |||||| |||||||| ||||| ||||||||||||||||| ||| | || ||||| ||||| Sbjct: 40361 ggaaccgagcagtgtggagaagattatggaaattgatgaccatattggttgtgctatgag 40302 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 368 aaccatagattctcatatggggaaccgttgacagtcgagtccaccacacaagc 420 |||||||||||||| ||||| || ||| |||| || |||||||| |||||||| Sbjct: 40161 aaccatagattctcgtatggtgagccgatgactgtagagtccacaacacaagc 40109
>dbj|AK099876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H14, full insert sequence Length = 1567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 ||||| |||| ||||| |||||| |||||||| | | || ||||| | ||| ||||| Sbjct: 715 atgtttctcatgaggatggagtaagaccgcgggttaaccattttctcactggacgggcgt 774 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||||||||||||||| ||||| |||| ||||||| Sbjct: 775 ctgttccaggtcgagtatgccattgaggtcatcaag 810
>gb|BC060575.1| Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 5, mRNA (cDNA clone MGC:72877 IMAGE:6920479), complete cds Length = 1017 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| |||||||||| | || ||||||| ||| |||| |||||||||| Sbjct: 281 tggagcctagcagcattgagaaaatcgtagagattgatgctcatataggttgtgccatga 340 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 341 gtgggctaattgctgatgc 359
>ref|NM_017282.1| Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 5 (Psma5), mRNA Length = 970 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| |||||||||| | || ||||||| ||| |||| |||||||||| Sbjct: 260 tggagcctagcagcattgagaaaatcgtagagattgatgctcatataggttgtgccatga 319 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 320 gtgggctaattgctgatgc 338
>dbj|D10756.1|RATPRORZ Rat mRNA for proteasome subunit R-ZETA, complete cds Length = 970 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| |||||||||| | || ||||||| ||| |||| |||||||||| Sbjct: 260 tggagcctagcagcattgagaaaatcgtagagattgatgctcatataggttgtgccatga 319 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 320 gtgggctaattgctgatgc 338
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 128 gggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||| ||||||||||||||||| ||||| |||| ||||||| Sbjct: 94357 gggcgtctgttccaggtcgagtatgccattgaggtcatcaag 94398
>ref|XM_757288.1| Ustilago maydis 521 hypothetical protein (UM06234.1) partial mRNA Length = 918 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaa 168 |||||||||||| || ||||||| |||||||||||| ||| || |||| ||||| Sbjct: 36 cttctccccggacggacggctgtaccaggtcgagtatgccttcaaggcgatcaa 89
>ref|XM_750383.1| Aspergillus fumigatus Af293 proteasome component Pup2 (Afu2g11440) partial mRNA Length = 753 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 110 aacaccttctccccggaggggcggctgttccaggtcga 147 |||||||||||||| || ||||| |||||||||||||| Sbjct: 49 aacaccttctcccccgaagggcgcctgttccaggtcga 86
>gb|AY431444.1| Aedes aegypti ASAP ID: 43014 proteasome endopeptidase mRNA sequence Length = 745 Score = 50.1 bits (25), Expect = 0.006 Identities = 94/117 (80%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 ||||||||||| || | || || ||||| || || ||||||||||| || ||||| || Sbjct: 54 atgttcctcaccagatccgaatatgaccgtggtgtcaacaccttctcgccagagggccga 113 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcggg 190 || ||||| || || ||||||||||| ||||| ||| | |||||||| || |||||| Sbjct: 114 ctcttccaagtagaatacgccatcgaagccataaagctcggatctacggccatcggg 170
>gb|DQ440413.1| Aedes aegypti clone AET-5533 20S proteasome regulatory subunit alpha type PSMA5/PUP2 mRNA, complete cds Length = 729 Score = 50.1 bits (25), Expect = 0.006 Identities = 94/117 (80%) Strand = Plus / Plus Query: 74 atgttcctcacgaggacggagtacgaccgcggcgtgaacaccttctccccggaggggcgg 133 ||||||||||| || | || || ||||| || || ||||||||||| || ||||| || Sbjct: 1 atgttcctcaccagatccgaatatgaccgtggtgtcaacaccttctcgccagagggccga 60 Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatctactgcaatcggg 190 || ||||| || || ||||||||||| ||||| ||| | |||||||| || |||||| Sbjct: 61 ctcttccaagtagaatacgccatcgaagccataaagctcggatctacggccatcggg 117
>ref|NM_185696.1| Oryza sativa (japonica cultivar-group), Ozsa8047 predicted mRNA Length = 753 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 33 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 80
>ref|NM_185686.1| Oryza sativa (japonica cultivar-group), Ozsa8037 predicted mRNA Length = 753 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 33 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 80
>ref|XM_525179.1| PREDICTED: Pan troglodytes LOC469795 (LOC469795), mRNA Length = 534 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 263 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 322 Query: 327 atgc 330 |||| Sbjct: 323 atgc 326
>ref|NM_002790.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5 (PSMA5), mRNA Length = 1023 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 276 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 335 Query: 327 atgc 330 |||| Sbjct: 336 atgc 339
>gb|BT019717.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5 mRNA, complete cds Length = 726 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 191 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 250 Query: 327 atgc 330 |||| Sbjct: 251 atgc 254
>gb|BT019716.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5 mRNA, partial cds Length = 726 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 191 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 250 Query: 327 atgc 330 |||| Sbjct: 251 atgc 254
>gb|BC102020.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5, mRNA (cDNA clone MGC:125804 IMAGE:40030394), complete cds Length = 881 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 261 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 320 Query: 327 atgc 330 |||| Sbjct: 321 atgc 324
>gb|BC102019.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5, mRNA (cDNA clone MGC:125803 IMAGE:40030392), complete cds Length = 881 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 261 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 320 Query: 327 atgc 330 |||| Sbjct: 321 atgc 324
>gb|BC102018.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5, mRNA (cDNA clone MGC:125802 IMAGE:40030391), complete cds Length = 881 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 261 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 320 Query: 327 atgc 330 |||| Sbjct: 321 atgc 324
>gb|BC103751.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5, mRNA (cDNA clone MGC:117302 IMAGE:6013212), complete cds Length = 1005 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 284 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 343 Query: 327 atgc 330 |||| Sbjct: 344 atgc 347
>ref|NM_001015566.1| Bos taurus proteasome (prosome, macropain) subunit, alpha type, 5 (PSMA5), mRNA Length = 970 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 291 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 350 Query: 327 atgc 330 |||| Sbjct: 351 atgc 354
>ref|XR_002428.1| PREDICTED: Mus musculus similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) (LOC669202), mRNA Length = 4047 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||||||| |||| ||||||| ||| |||| |||||||||| Sbjct: 2746 tggagcctagcagcattgagaaaattgtggagattgatgctcatataggttgtgccatga 2805
>ref|XM_386335.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG06159.1) partial mRNA Length = 732 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 110 aacaccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaag 169 |||||||||||||| || || || || ||||||||||| ||| | |||||||||||||| Sbjct: 31 aacaccttctcccccgaaggccgtctcttccaggtcgaatactctctcgaggccatcaag 90
>gb|AC134331.2| Mus musculus BAC clone RP24-344O12 from chromosome 19, complete sequence Length = 155342 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||||||| |||| ||||||| ||| |||| |||||||||| Sbjct: 83910 tggagcctagcagcattgagaaaattgtggagattgatgctcatataggttgtgccatga 83969
>ref|XM_736381.1| Plasmodium chabaudi chabaudi proteasome subunit alpha type 5, (PC000270.04.0) partial mRNA Length = 759 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Plus Query: 284 attgatgagcatgtaggctgtgccatgagtggccttattgctgatgcaagaacattggtt 343 |||||||| ||| |||| ||||| |||||||| | || || ||||||||||||||| || Sbjct: 196 attgatgatcatataggatgtgcaatgagtggattgatggcagatgcaagaacattgatt 255 Query: 344 gagcatgc 351 || ||||| Sbjct: 256 gatcatgc 263
>emb|X61970.1|HSMPZE H.sapiens mRNA for macropain subunit zeta Length = 959 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 212 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 271 Query: 327 atgc 330 |||| Sbjct: 272 atgc 275
>emb|X52319.1|DMPROS29 Fruit fly mRNA for proteosome subunit Length = 928 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 110 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 161
>emb|CR456847.1| Homo sapiens full open reading frame cDNA clone RZPDo834E076D for gene PSMA5, proteasome (prosome, macropain) subunit, alpha type, 5; complete cds, incl. stopcodon Length = 726 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 191 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 250 Query: 327 atgc 330 |||| Sbjct: 251 atgc 254
>emb|AJ418041.1|PPA418041 Physcomitrella patens mRNA for 20S proteasome subunit alpha V (zeta gene) Length = 952 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 ||||||| | |||||| ||||| || |||||||| ||||| ||| | || |||||||||| Sbjct: 256 tggaacccaccagtgtcgagaagatcatggaaatcgatgaacatattgggtgtgccatga 315 Query: 312 gtgg 315 |||| Sbjct: 316 gtgg 319
>emb|CR614020.1| full-length cDNA clone CS0DB008YN13 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 968 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 288 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 347 Query: 327 atgc 330 |||| Sbjct: 348 atgc 351
>emb|CR602805.1| full-length cDNA clone CS0DC009YD16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 963 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 285 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 344 Query: 327 atgc 330 |||| Sbjct: 345 atgc 348
>emb|CR603065.1| full-length cDNA clone CS0DI073YD09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 954 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 258 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 317 Query: 327 atgc 330 |||| Sbjct: 318 atgc 321
>emb|CR601200.1| full-length cDNA clone CS0DI075YM05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 984 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 286 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 345 Query: 327 atgc 330 |||| Sbjct: 346 atgc 349
>emb|CR600422.1| full-length cDNA clone CS0DI075YA07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1001 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 305 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 364 Query: 327 atgc 330 |||| Sbjct: 365 atgc 368
>emb|CR600385.1| full-length cDNA clone CS0DK008YL12 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 957 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 288 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 347 Query: 327 atgc 330 |||| Sbjct: 348 atgc 351
>emb|CR595573.1| full-length cDNA clone CS0DD004YD15 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 949 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 270 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 329 Query: 327 atgc 330 |||| Sbjct: 330 atgc 333
>ref|NM_057343.3| Drosophila melanogaster Proteasome 29kD subunit CG9327-RA (Pros29), mRNA Length = 971 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 122 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 173
>gb|AY084140.1| Drosophila melanogaster RE23862 full insert cDNA Length = 988 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 123 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 174
>dbj|AK141380.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430043C19 product:unclassifiable, full insert sequence Length = 4049 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Minus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||||||| |||| ||||||| ||| |||| |||||||||| Sbjct: 1302 tggagcctagcagcattgagaaaattgtggagattgatgctcatataggttgtgccatga 1243
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagta 150 |||||| || ||||||||||||| |||||||||||| Sbjct: 539434 cttctcgcccgaggggcggctgtaccaggtcgagta 539469 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||||||||| |||||||| | |||||||||||| Sbjct: 81784 ctgttccaggtggagtacgcgctagaggccatcaag 81819
>gb|BC102343.1| Bos taurus proteasome (prosome, macropain) subunit, alpha type, 5, mRNA (cDNA clone MGC:127358 IMAGE:7946974), complete cds Length = 992 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 284 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 343 Query: 327 atgc 330 |||| Sbjct: 344 atgc 347
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 3869188 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 3869235 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 3831132 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 3831179 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 3419617 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 3419664
>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone BACR10P11, complete sequence Length = 164035 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 41009 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 40958
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 127142 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 127189 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 89086 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 89133
>gb|AY891040.1| Synthetic construct Homo sapiens clone FLH007207.01L proteasome subunit alpha type 5 (PSMA5) mRNA, partial cds Length = 726 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 191 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 250 Query: 327 atgc 330 |||| Sbjct: 251 atgc 254
>ref|NM_211639.1| Eremothecium gossypii AGL089Wp (AGL089W), mRNA Length = 741 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagta 150 |||||| || ||||||||||||| |||||||||||| Sbjct: 36 cttctcgcccgaggggcggctgtaccaggtcgagta 71
>dbj|AK059984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G05, full insert sequence Length = 1077 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 123 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 170
>gb|BT021033.1| Bos taurus proteasome (prosome, macropain) subunit, alpha type, 5 (PSMA5), mRNA, complete cds Length = 988 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 291 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 350 Query: 327 atgc 330 |||| Sbjct: 351 atgc 354
>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete sequence Length = 303438 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 210259 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 210310
>gb|AC005268.1|AC005268 Drosophila melanogaster DNA sequence (P1s DS03550 (D225) and DS02397 (D206)), complete sequence Length = 89791 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 69470 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 69419
>gb|AY650295.2| Macaca fascicularis proteasome subunit alpha-type 5 mRNA, partial cds Length = 631 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 143 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 202 Query: 327 atgc 330 |||| Sbjct: 203 atgc 206
>gb|BC018605.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 5, mRNA (cDNA clone IMAGE:3925105) Length = 1682 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 969 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 1028 Query: 327 atgc 330 |||| Sbjct: 1029 atgc 1032
>dbj|AB026560.1| Oryza sativa (japonica cultivar-group) OsPAC1 mRNA for alpha 3 subunit of 20S proteasome, complete cds Length = 999 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 126 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 173
>gb|BC108368.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 5, mRNA (cDNA clone MGC:118067 IMAGE:3596530), complete cds Length = 992 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 257 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 316 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 317 gtgggctaattgctgatgc 335
>gb|BT016493.1| Zea mays clone Contig326 mRNA sequence Length = 1011 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 137 ttccaggtcgagtacgccatcgaggcc 163 |||||||||||||||||| |||||||| Sbjct: 107 ttccaggtcgagtacgccctcgaggcc 133
>gb|BC083342.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 5, mRNA (cDNA clone MGC:102091 IMAGE:5700963), complete cds Length = 1016 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 260 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 319 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 320 gtgggctaattgctgatgc 338
>gb|BC010709.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 5, mRNA (cDNA clone MGC:6815 IMAGE:2648635), complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 263 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 322 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 323 gtgggctaattgctgatgc 341
>ref|NM_011967.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 5 (Psma5), mRNA Length = 953 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 242 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 301 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 302 gtgggctaattgctgatgc 320
>ref|XM_001001974.1| PREDICTED: Mus musculus similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain), transcript variant 2 (LOC671726), mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 285 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 344 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 345 gtgggctaattgctgatgc 363
>ref|XM_001001965.1| PREDICTED: Mus musculus similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain), transcript variant 1 (LOC671726), mRNA Length = 1018 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 289 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 348 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 349 gtgggctaattgctgatgc 367
>ref|XM_987563.1| PREDICTED: Mus musculus similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) (LOC676113), mRNA Length = 1006 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 285 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 344 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 345 gtgggctaattgctgatgc 363
>ref|XM_001002751.1| PREDICTED: Mus musculus similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain), transcript variant 2 (LOC666974), mRNA Length = 1006 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 285 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 344 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 345 gtgggctaattgctgatgc 363
>ref|XM_001002745.1| PREDICTED: Mus musculus similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain), transcript variant 1 (LOC666974), mRNA Length = 1010 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 289 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 348 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 349 gtgggctaattgctgatgc 367
>ref|XM_817190.1| Trypanosoma brucei TREU927 proteasome subunit alpha 5 (Tb10.100.0120) partial mRNA Length = 741 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 149 tacgccatcgaggccatcaagttggga 175 |||||||||||||| |||||||||||| Sbjct: 76 tacgccatcgaggcaatcaagttggga 102
>emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome alpha subunit (paa gene) Length = 1040 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgc 153 ||||||||||||||| || |||| ||| ||||||||||| Sbjct: 126 cttctccccggagggacgcctgtaccaagtcgagtacgc 164
>gb|AC122419.4| Mus musculus BAC clone RP24-163H24 from chromosome 10, complete sequence Length = 131907 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Minus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 127629 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 127570 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 127569 gtgggctaattgctgatgc 127551
>dbj|AK143468.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860006C15 product:proteasome (prosome, macropain) subunit, alpha type 5, full insert sequence Length = 1219 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 529 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 588 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 589 gtgggctaattgctgatgc 607
>dbj|AK161680.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730524B02 product:proteasome (prosome, macropain) subunit, alpha type 5, full insert sequence Length = 980 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 275 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 334 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 335 gtgggctaattgctgatgc 353
>dbj|AK160741.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110003E13 product:proteasome (prosome, macropain) subunit, alpha type 5, full insert sequence Length = 996 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 290 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 349 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 350 gtgggctaattgctgatgc 368
>dbj|AK160550.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410046B16 product:proteasome (prosome, macropain) subunit, alpha type 5, full insert sequence Length = 986 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 281 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 340 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 341 gtgggctaattgctgatgc 359
>dbj|AK160530.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410002O12 product:proteasome (prosome, macropain) subunit, alpha type 5, full insert sequence Length = 1006 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 287 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 346 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 347 gtgggctaattgctgatgc 365
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 137 ttccaggtcgagtacgccatcgaggcc 163 |||||||||||||||||| |||||||| Sbjct: 20870397 ttccaggtcgagtacgccctcgaggcc 20870423
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 137 ttccaggtcgagtacgccatcgaggcc 163 |||||||||||||||||| |||||||| Sbjct: 62623 ttccaggtcgagtacgccctcgaggcc 62649
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 137 ttccaggtcgagtacgccatcgaggcc 163 |||||||||||||||||| |||||||| Sbjct: 145426 ttccaggtcgagtacgccctcgaggcc 145452
>gb|AF140353.1|AF140353 Trypanosoma brucei brucei 20S proteasome alpha 5 subunit (alpha5) gene, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 149 tacgccatcgaggccatcaagttggga 175 |||||||||||||| |||||||||||| Sbjct: 76 tacgccatcgaggcaatcaagttggga 102
>gb|AY107760.1| Zea mays PCO113667 mRNA sequence Length = 1128 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 137 ttccaggtcgagtacgccatcgaggcc 163 |||||||||||||||||| |||||||| Sbjct: 138 ttccaggtcgagtacgccctcgaggcc 164
>gb|AY104377.1| Zea mays PCO108605 mRNA sequence Length = 1142 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgc 153 ||||||||||||||| || |||| ||| ||||||||||| Sbjct: 135 cttctccccggagggacgcctgtaccaagtcgagtacgc 173
>gb|AF019661.1|AF019661 Mus musculus zeta proteasome chain mRNA, complete cds Length = 953 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 242 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 301 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 302 gtgggctaattgctgatgc 320
>gb|AC100386.29| Mus musculus chromosome 10, clone RP23-132J19, complete sequence Length = 216928 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 185998 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 186057 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 186058 gtgggctaattgctgatgc 186076
>gb|BC007181.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 5, mRNA (cDNA clone IMAGE:3590451) Length = 1003 Score = 46.1 bits (23), Expect = 0.097 Identities = 65/79 (82%) Strand = Plus / Plus Query: 252 tggaacctagcagtgttgagaaaattatggaaattgatgagcatgtaggctgtgccatga 311 |||| |||||||| ||||||| ||| | || || |||| ||| |||| |||||||||| Sbjct: 274 tggagcctagcagcattgagaagattgtagagatcgatgctcatataggttgtgccatga 333 Query: 312 gtggccttattgctgatgc 330 |||| || ||||||||||| Sbjct: 334 gtgggctaattgctgatgc 352
>dbj|AB032061.1| Oryza sativa (japonica cultivar-group) OsPAD1 mRNA for alpha 4 subunit of 20S proteasome, complete cds Length = 1007 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 137 ttccaggtcgagtacgccatcgaggcc 163 |||||||||||||||||| |||||||| Sbjct: 94 ttccaggtcgagtacgccctcgaggcc 120
>ref|XM_463746.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1434 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 acgccatcgaggccatcaagtt 171 |||||||||||||||||||||| Sbjct: 41 acgccatcgaggccatcaagtt 62
>ref|XM_860992.1| PREDICTED: Canis familiaris similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain), transcript variant 2 (LOC490123), mRNA Length = 854 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 taggctgtgccatgagtggccttattgctgatgc 330 |||| |||||||||||||| || ||||||||||| Sbjct: 182 taggttgtgccatgagtgggctaattgctgatgc 215
>ref|XM_547244.2| PREDICTED: Canis familiaris similar to Proteasome subunit alpha type 5 (Proteasome zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain), transcript variant 1 (LOC490123), mRNA Length = 989 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 taggctgtgccatgagtggccttattgctgatgc 330 |||| |||||||||||||| || ||||||||||| Sbjct: 317 taggttgtgccatgagtgggctaattgctgatgc 350
>emb|BX248230.21| Zebrafish DNA sequence from clone CH211-213O11 in linkage group 11, complete sequence Length = 217432 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 taggctgtgccatgagtggccttattgctgatgc 330 |||||||||||||||||||| | || |||||||| Sbjct: 80756 taggctgtgccatgagtggcttgatagctgatgc 80789
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 tgggatctactgcaatcgggttgaagacga 200 |||| ||||||||||| ||||||||||||| Sbjct: 18913559 tgggctctactgcaattgggttgaagacga 18913530
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 acgccatcgaggccatcaagtt 171 |||||||||||||||||||||| Sbjct: 41879565 acgccatcgaggccatcaagtt 41879586
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 acgccatcgaggccatcaagtt 171 |||||||||||||||||||||| Sbjct: 122941 acgccatcgaggccatcaagtt 122962
>gb|AF210324.1|AF210324 Oryza sativa clone C26554 UMP synthase (UMPS1) mRNA, complete cds Length = 1750 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 acgccatcgaggccatcaagtt 171 |||||||||||||||||||||| Sbjct: 135 acgccatcgaggccatcaagtt 156
>gb|AF210323.1|AF210323 Oryza sativa clone C26785 UMP synthase (UMPS1) mRNA, complete cds Length = 1744 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 acgccatcgaggccatcaagtt 171 |||||||||||||||||||||| Sbjct: 125 acgccatcgaggccatcaagtt 146
>dbj|AK069565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023L08, full insert sequence Length = 2085 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 acgccatcgaggccatcaagtt 171 |||||||||||||||||||||| Sbjct: 141 acgccatcgaggccatcaagtt 162
>gb|AY462282.1| Sus scrofa proteasome subunit type alpha 5 gene, partial cds Length = 1084 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 taggctgtgccatgagtggccttattgctgatgc 330 |||| |||||||||||||| || ||||||||||| Sbjct: 2 taggttgtgccatgagtgggctaattgctgatgc 35
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 tgggatctactgcaatcgggttgaagacga 200 |||| ||||||||||| ||||||||||||| Sbjct: 18839786 tgggctctactgcaattgggttgaagacga 18839757
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 tgggatctactgcaatcgggttgaagacga 200 |||| ||||||||||| ||||||||||||| Sbjct: 56820 tgggctctactgcaattgggttgaagacga 56849
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 tgggatctactgcaatcgggttgaagacga 200 |||| ||||||||||| ||||||||||||| Sbjct: 9676 tgggctctactgcaattgggttgaagacga 9647
>dbj|AB031395.1| Oryza sativa (japonica cultivar-group) mRNA for UMP synthase 1, complete cds Length = 1743 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 acgccatcgaggccatcaagtt 171 |||||||||||||||||||||| Sbjct: 125 acgccatcgaggccatcaagtt 146
>gb|AE010335.1| Methanopyrus kandleri AV19 section 34 of 157 of the complete genome Length = 12939 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 121 cccggaggggcggctgttccaggtcgagtacgc 153 |||||| || || |||||||||||||||||||| Sbjct: 6573 cccggacggtcgactgttccaggtcgagtacgc 6541
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ggaggggcggctgttccaggtcgag 148 |||||||||||||||| |||||||| Sbjct: 1659033 ggaggggcggctgttcgaggtcgag 1659009
>ref|XM_462564.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G24882g) partial mRNA Length = 774 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gaggccatcaagttgggatctactgcaat 186 ||||||||||| |||||||| |||||||| Sbjct: 85 gaggccatcaaattgggatccactgcaat 113
>gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, complete sequence Length = 236143 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtgccatgagtggccttattgctgatgc 330 |||||||||||||| || ||||||||||| Sbjct: 32907 tgtgccatgagtgggctaattgctgatgc 32935
>ref|XM_804684.1| Trypanosoma cruzi strain CL Brener proteasome alpha 1 subunit (Tc00.1047053506167.40) partial mRNA Length = 798 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 131 cggctgttccaggtcgagtacgcca 155 |||||||||||||| |||||||||| Sbjct: 52 cggctgttccaggtagagtacgcca 76
>ref|XM_797774.1| Trypanosoma cruzi strain CL Brener proteasome alpha 7 subunit (Tc00.1047053507785.20) partial mRNA Length = 148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 131 cggctgttccaggtcgagtacgcca 155 |||||||||||||| |||||||||| Sbjct: 52 cggctgttccaggtagagtacgcca 76
>ref|XM_674640.1| Plasmodium berghei strain ANKA proteasome subunit alpha type 5, (PB000705.00.0) partial mRNA Length = 759 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 283 aattgatgagcatgtaggctgtgccatgagtggccttattgctgatgcaagaacatt 339 ||||||||| ||| |||| ||||| |||||||| | || || |||||||||||||| Sbjct: 195 aattgatgaccatataggatgtgcaatgagtgggttaatggcagatgcaagaacatt 251
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 gccatcgaggccatcaagttg 172 ||||||||||||||||||||| Sbjct: 2637618 gccatcgaggccatcaagttg 2637598
>emb|AL390252.9| Human DNA sequence from clone RP11-297O4 on chromosome 1 Contains the CELSR2 gene for cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila), the gene for differential display and activated by p53 (DDA3), the gene for novel protein similar to Myosin-binding protein H (MyBP-H) (H-protein) (LOC343263), the SORT1 gene for sortilin 1 and the 3' end of the PSMA5 gene for proteasome (prosome, macropain) subunit, alpha type, 5, complete sequence Length = 169241 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 302 tgtgccatgagtggccttattgctgatgc 330 |||||||||||||| || ||||||||||| Sbjct: 166383 tgtgccatgagtgggctaattgctgatgc 166355
>ref|XM_963562.1| PREDICTED: Tribolium castaneum similar to proteasome (prosome, macropain) subunit, alpha type 6 (LOC657082), mRNA Length = 815 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 116 ttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaa 168 |||||||| ||||||||||| | ||| |||||||| ||| || | |||||||| Sbjct: 46 ttctcccccgaggggcggctctaccaagtcgagtatgccttcaaagccatcaa 98
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 158 gaggccatcaagttgggatctactgcaat 186 ||||||||||| |||||||| |||||||| Sbjct: 1905258 gaggccatcaaattgggatccactgcaat 1905230
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 ccaggtcgagtacgccatcgaggcc 163 ||||| ||||||||||||||||||| Sbjct: 60977 ccaggccgagtacgccatcgaggcc 60953
>gb|AC183530.3| Pan troglodytes BAC clone CH251-653K11 from chromosome 1, complete sequence Length = 198127 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 302 tgtgccatgagtggccttattgctgatgc 330 |||||||||||||| || ||||||||||| Sbjct: 110899 tgtgccatgagtgggctaattgctgatgc 110871
>gb|AC092372.3| Homo sapiens chromosome 5 clone RP11-58M12, complete sequence Length = 101220 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatga 291 |||| |||||||||||||||||||| Sbjct: 100147 ttgaaaaaattatggaaattgatga 100171
>gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, complete sequence Length = 219258 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatga 291 |||| |||||||||||||||||||| Sbjct: 162668 ttgaaaaaattatggaaattgatga 162692
>gb|AC012624.6| Homo sapiens chromosome 5 clone CTD-2082I17, complete sequence Length = 134365 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 ttgagaaaattatggaaattgatga 291 |||| |||||||||||||||||||| Sbjct: 45034 ttgaaaaaattatggaaattgatga 45010
>gb|AC026778.4|AC026778 Homo sapiens chromosome 5 clone CTC-428I11, complete sequence Length = 195433 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatga 291 |||| |||||||||||||||||||| Sbjct: 102934 ttgaaaaaattatggaaattgatga 102958
>gb|AY184356.1| Gasterosteus aculeatus proteasome subunit alpha 3 mRNA, partial cds Length = 283 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 112 caccttctccccggaggggcggctgttccaggtcgagtacgccat 156 ||||||||| || || ||||| |||||||||| ||||||||||| Sbjct: 82 caccttctctccagatgggcgcgtgttccaggtggagtacgccat 126
>gb|U75302.1|TCU75302 Trypanosoma cruzi 29 kDa proteasome subunit class II (tcpr29B) mRNA, complete cds Length = 1155 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 131 cggctgttccaggtcgagtacgcca 155 |||||||||||||| |||||||||| Sbjct: 70 cggctgttccaggtagagtacgcca 94
>gb|U73851.1|TCU73851 Trypanosoma cruzi 29 kDa proteasome subunit TCPR29 (tcpr29) mRNA, complete cds Length = 1199 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 131 cggctgttccaggtcgagtacgcca 155 |||||||||||||| |||||||||| Sbjct: 98 cggctgttccaggtagagtacgcca 122
>emb|AL671899.11| Mouse DNA sequence from clone RP23-27B23 on chromosome 3, complete sequence Length = 132775 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtgccatgagtggccttattgctgatgc 330 |||||||||||||| || ||||||||||| Sbjct: 4546 tgtgccatgagtgggctaattgctgatgc 4574
>emb|AL831710.8| Mouse DNA sequence from clone RP23-29K19 on chromosome 4, complete sequence Length = 191635 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 tgccatgagtggccttattgc 324 ||||||||||||||||||||| Sbjct: 87074 tgccatgagtggccttattgc 87054
>gb|AY398400.1| Danio rerio clone RK071A1A07 proteasome subunit, alpha type, 5 (PSMA5) mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 299 ggctgtgccatgagtggccttattgctgatgc 330 |||||||||||||||||| | || |||||||| Sbjct: 295 ggctgtgccatgagtggcttgatagctgatgc 326
>ref|NM_185665.2| Oryza sativa (japonica cultivar-group), mRNA Length = 957 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 120 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 167
>gb|BT016358.1| Zea mays clone Contig191 mRNA sequence Length = 994 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 68 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 115
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 92 gagtacgaccgcggcgtgaacaccttctcccc 123 ||||||||||| || || |||||||||||||| Sbjct: 788558 gagtacgaccggggtgtcaacaccttctcccc 788527
>ref|XM_711383.1| Candida albicans SC5314 putative a-pheromone maturation protease (CaO19_7342), mRNA Length = 4113 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 aaaattatggaaattgatga 291 |||||||||||||||||||| Sbjct: 4106 aaaattatggaaattgatga 4087
>gb|AY728266.1| Trypanosoma cruzi voucher Dm28c zinc finger protein 7 (zinc7) gene, partial cds; and zinc finger protein 8 (zinc8), heavy chain clathrin (claH), and alpha6 proteasome subunit (pr29A) genes, complete cds Length = 14737 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 ggctgttccaggtcgagtacgcca 155 ||||||||||||| |||||||||| Sbjct: 13636 ggctgttccaggtagagtacgcca 13659
>gb|AC118561.10| Mus musculus chromosome 12, clone RP23-265N17, complete sequence Length = 227977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 agaaaattatggaaattgat 289 |||||||||||||||||||| Sbjct: 107057 agaaaattatggaaattgat 107076
>ref|XM_572324.1| Cryptococcus neoformans var. neoformans JEC21 proteasome subunit alpha type 5 (CNH01360) partial mRNA Length = 813 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 gagtacgaccgcggcgtgaacaccttctcccc 123 ||||||||||| || || |||||||||||||| Sbjct: 100 gagtacgaccggggtgtcaacaccttctcccc 131
>emb|CR727970.2|CNS0GONC Tetraodon nigroviridis full-length cDNA Length = 989 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 165 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 212
>emb|CR727498.2|CNS0GOA8 Tetraodon nigroviridis full-length cDNA Length = 989 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 165 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 212
>emb|CR727201.2|CNS0GO1Z Tetraodon nigroviridis full-length cDNA Length = 973 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 150 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 197
>emb|CR725216.2|CNS0GMIU Tetraodon nigroviridis full-length cDNA Length = 959 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 135 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 182
>emb|CR705071.2|CNS0G6ZF Tetraodon nigroviridis full-length cDNA Length = 906 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 86 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 133
>emb|CR704698.2|CNS0G6P2 Tetraodon nigroviridis full-length cDNA Length = 993 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 171 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 218
>emb|CR700470.2|CNS0G3FM Tetraodon nigroviridis full-length cDNA Length = 970 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 148 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 195
>emb|CR699896.2|CNS0G2ZO Tetraodon nigroviridis full-length cDNA Length = 1002 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 171 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 218
>emb|CR698069.2|CNS0G1KX Tetraodon nigroviridis full-length cDNA Length = 968 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 146 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 193
>emb|CR697897.1|CNS0G1G5 Tetraodon nigroviridis full-length cDNA Length = 953 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 134 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 181
>emb|CR694814.2|CNS0FZ2I Tetraodon nigroviridis full-length cDNA Length = 978 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 157 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 204
>emb|CR692623.2|CNS0FXDN Tetraodon nigroviridis full-length cDNA Length = 972 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 158 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 205
>emb|CR685960.2|CNS0FS8K Tetraodon nigroviridis full-length cDNA Length = 993 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 171 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 218
>emb|CR688259.2|CNS0FU0F Tetraodon nigroviridis full-length cDNA Length = 967 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 143 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 190
>emb|CR688135.1|CNS0FTWZ Tetraodon nigroviridis full-length cDNA Length = 935 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 126 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 173
>emb|CR681238.2|CNS0FOLE Tetraodon nigroviridis full-length cDNA Length = 977 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 152 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 199
>emb|CR679103.2|CNS0FMY3 Tetraodon nigroviridis full-length cDNA Length = 1128 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 316 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 363
>emb|CR678237.2|CNS0FMA9 Tetraodon nigroviridis full-length cDNA Length = 997 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 170 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 217
>emb|CR677793.2|CNS0FLY1 Tetraodon nigroviridis full-length cDNA Length = 926 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 166 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 213
>emb|CR676703.2|CNS0FL3V Tetraodon nigroviridis full-length cDNA Length = 973 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 145 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 192
>emb|CR675798.2|CNS0FKF0 Tetraodon nigroviridis full-length cDNA Length = 1137 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 315 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 362
>emb|CR673260.2|CNS0FIGI Tetraodon nigroviridis full-length cDNA Length = 1018 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 199 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 246
>emb|CR672112.2|CNS0FHKM Tetraodon nigroviridis full-length cDNA Length = 982 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 157 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 204
>emb|CR672105.2|CNS0FHKF Tetraodon nigroviridis full-length cDNA Length = 1002 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 178 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 225
>emb|CR671749.2|CNS0FHAJ Tetraodon nigroviridis full-length cDNA Length = 978 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 167 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 214
>emb|CR671990.2|CNS0FHH8 Tetraodon nigroviridis full-length cDNA Length = 1156 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 329 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 376
>emb|CR671579.2|CNS0FH5T Tetraodon nigroviridis full-length cDNA Length = 1009 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 188 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 235
>emb|CR670122.2|CNS0FG1C Tetraodon nigroviridis full-length cDNA Length = 983 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 161 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 208
>emb|CR668423.2|CNS0FEQ5 Tetraodon nigroviridis full-length cDNA Length = 994 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 167 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 214
>emb|CR667949.2|CNS0FECZ Tetraodon nigroviridis full-length cDNA Length = 986 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 159 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 206
>emb|CR664328.2|CNS0FBKE Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 277 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 324
>emb|CR661379.2|CNS0F9AH Tetraodon nigroviridis full-length cDNA Length = 983 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 170 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 217
>emb|CR658674.1|CNS0F77C Tetraodon nigroviridis full-length cDNA Length = 1019 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 238 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 285
>emb|CR646148.2|CNS0EXJE Tetraodon nigroviridis full-length cDNA Length = 966 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 119 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 166 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 146 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 193
>ref|XM_501939.1| Yarrowia lipolytica CLIB122, YALI0C17325g predicted mRNA Length = 870 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 ttccaggtcgagtacgccatcgaggccatcaa 168 |||||||| ||||||||| | ||||||||||| Sbjct: 55 ttccaggtggagtacgcccttgaggccatcaa 86
>emb|AL031767.13|HS135L22 Human DNA sequence from clone RP1-135L22 on chromosome 6p22.2-22.3 Contains part of a novel gene, complete sequence Length = 121212 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 attgatgagcatgtaggctg 303 |||||||||||||||||||| Sbjct: 27860 attgatgagcatgtaggctg 27841
>emb|BX063333.1|CNS09L15 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC45AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 984 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttccaggtcgagtacgccatcgaggccatcaa 168 |||||||| ||||| ||||||||||| ||||| Sbjct: 982 ttccaggttgagtatgccatcgaggcgatcaa 951
>ref|XM_967240.1| PREDICTED: Tribolium castaneum similar to Tetratricopeptide repeat protein 11 (TPR repeat protein 11) (Fis1 homolog) (LOC661051), mRNA Length = 920 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gggggttgttcttgctgtgg 226 |||||||||||||||||||| Sbjct: 454 gggggttgttcttgctgtgg 473
>emb|CR385074.10| Zebrafish DNA sequence from clone CH211-258K6 in linkage group 23, complete sequence Length = 163114 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tgagtggccttattgctgat 328 |||||||||||||||||||| Sbjct: 79554 tgagtggccttattgctgat 79535
>gb|AC161369.3| Mus musculus BAC clone RP23-426C11 from chromosome 3, complete sequence Length = 202655 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gagaaaattatggaaattga 288 |||||||||||||||||||| Sbjct: 45633 gagaaaattatggaaattga 45652
>gb|BC071495.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type,5, mRNA (cDNA clone MGC:86851 IMAGE:6902856), complete cds Length = 1102 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 299 ggctgtgccatgagtggccttattgctgatgc 330 |||||||||||||||||| | || |||||||| Sbjct: 299 ggctgtgccatgagtggcttgatagctgatgc 330
>dbj|AB169279.1| Macaca fascicularis testis cDNA, clone: QtsA-18608, similar to human proteasome (prosome, macropain) subunit, alpha type, 5(PSMA5), mRNA, RefSeq: NM_002790.2 Length = 2166 Score = 40.1 bits (20), Expect = 6.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaattgatgagcatgtaggctgtgccatgagtggccttattgctg 326 ||||||||||| | || ||||||| || |||| |||||||||||||| || ||||||| Sbjct: 300 ttgagaaaattgtagagattgatgctcacataggttgtgccatgagtgggctaattgctg 359
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| ||||||| || ||||| Sbjct: 16677279 cttctcgccggaggggcggctctaccaggtgcagtacgcgatggaggc 16677326
>gb|AC009211.5|AC009211 Drosophila melanogaster, chromosome 3R, region 87D11-87E3, BAC clone BACR48D15, complete sequence Length = 184272 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaatt 286 |||||||||||||||||||| Sbjct: 86202 ttgagaaaattatggaaatt 86221
>ref|NM_205708.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type,5 (psma5), mRNA Length = 1104 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 299 ggctgtgccatgagtggccttattgctgatgc 330 |||||||||||||||||| | || |||||||| Sbjct: 295 ggctgtgccatgagtggcttgatagctgatgc 326
>gb|AC009062.8| Homo sapiens chromosome 16 clone RP11-298C15, complete sequence Length = 207345 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ccatagattctcatatgggg 389 |||||||||||||||||||| Sbjct: 134401 ccatagattctcatatgggg 134420
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 36321 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 36368
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 111171 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 111218
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| |||||||||||||| | |||||| ||||||| || ||||| Sbjct: 17191 cttctcgccggaggggcggctctaccaggtgcagtacgcgatggaggc 17238
>ref|NM_211393.1| Eremothecium gossypii AGL336Wp (AGL336W), mRNA Length = 921 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 134 ctgttccaggtcgagtacgccatcgaggccatcaag 169 ||||||||||| |||||||| | |||||||||||| Sbjct: 274 ctgttccaggtggagtacgcgctagaggccatcaag 309
>dbj|AK067977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123K20, full insert sequence Length = 957 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 120 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 167
>gb|AC122531.4| Mus musculus BAC clone RP24-536C4 from 3, complete sequence Length = 188887 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gagaaaattatggaaattga 288 |||||||||||||||||||| Sbjct: 168847 gagaaaattatggaaattga 168866
>gb|AY107786.1| Zea mays PCO106817 mRNA sequence Length = 1163 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 115 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 162 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 206 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 253
>gb|AE003698.3| Drosophila melanogaster chromosome 3R, section 36 of 118 of the complete sequence Length = 247955 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ttgagaaaattatggaaatt 286 |||||||||||||||||||| Sbjct: 204347 ttgagaaaattatggaaatt 204366
>emb|AL807818.14| Zebrafish DNA sequence from clone CH211-225H24, complete sequence Length = 194425 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 tgagtggccttattgctgat 328 |||||||||||||||||||| Sbjct: 190508 tgagtggccttattgctgat 190527 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,115,575 Number of Sequences: 3902068 Number of extensions: 3115575 Number of successful extensions: 73916 Number of sequences better than 10.0: 252 Number of HSP's better than 10.0 without gapping: 254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73357 Number of HSP's gapped (non-prelim): 546 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)