Clone Name | basd3m03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3112 Score = 200 bits (101), Expect = 4e-48 Identities = 273/329 (82%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 180 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 239 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 248 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 307 Query: 240 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 299 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 308 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 367 Query: 300 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 359 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 368 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 427 Query: 360 agtttggccctgatgctgacttcattctcacttacactgatgaggatgggggatgttgtc 419 ||||||| | |||| ||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 428 agtttggttcggatgtcgacttcattctgacttacactgatgaggatgggg-atattgtc 486 Query: 420 atgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctc 479 |||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| ||| Sbjct: 487 atgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctc 546 Query: 480 aggattaatgttcaggtaaagaatagcca 508 ||||||||||||||| |||| || ||||| Sbjct: 547 aggattaatgttcagttaaacaacagcca 575 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 27 ccgccgctgcggcttacggctacgcagctctc 58 |||||||||||||| ||||||||||||||||| Sbjct: 69 ccgccgctgcggctcacggctacgcagctctc 100
>ref|XM_506848.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016G10.28-1 mRNA Length = 3152 Score = 200 bits (101), Expect = 4e-48 Identities = 273/329 (82%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 180 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 239 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 288 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 347 Query: 240 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 299 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 348 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 407 Query: 300 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 359 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 408 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 467 Query: 360 agtttggccctgatgctgacttcattctcacttacactgatgaggatgggggatgttgtc 419 ||||||| | |||| ||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 468 agtttggttcggatgtcgacttcattctgacttacactgatgaggatgggg-atattgtc 526 Query: 420 atgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctc 479 |||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| ||| Sbjct: 527 atgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctc 586 Query: 480 aggattaatgttcaggtaaagaatagcca 508 ||||||||||||||| |||| || ||||| Sbjct: 587 aggattaatgttcagttaaacaacagcca 615 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 27 ccgccgctgcggcttacggctacgcagctctc 58 |||||||||||||| ||||||||||||||||| Sbjct: 109 ccgccgctgcggctcacggctacgcagctctc 140
>dbj|AK099686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E12, full insert sequence Length = 3112 Score = 200 bits (101), Expect = 4e-48 Identities = 273/329 (82%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 180 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 239 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 248 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 307 Query: 240 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 299 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 308 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 367 Query: 300 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 359 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 368 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 427 Query: 360 agtttggccctgatgctgacttcattctcacttacactgatgaggatgggggatgttgtc 419 ||||||| | |||| ||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 428 agtttggttcggatgtcgacttcattctgacttacactgatgaggatgggg-atattgtc 486 Query: 420 atgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctc 479 |||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| ||| Sbjct: 487 atgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctc 546 Query: 480 aggattaatgttcaggtaaagaatagcca 508 ||||||||||||||| |||| || ||||| Sbjct: 547 aggattaatgttcagttaaacaacagcca 575 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 27 ccgccgctgcggcttacggctacgcagctctc 58 |||||||||||||| ||||||||||||||||| Sbjct: 69 ccgccgctgcggctcacggctacgcagctctc 100
>dbj|AK072838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141P19, full insert sequence Length = 3149 Score = 182 bits (92), Expect = 1e-42 Identities = 270/329 (82%), Gaps = 4/329 (1%) Strand = Plus / Plus Query: 180 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 239 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 288 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 347 Query: 240 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttcaatggctatgtca 299 ||||||||||| ||||||| || |||||||| || |||||||||||| ||| ||||| Sbjct: 348 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttcggtgggtatgtgc 407 Query: 300 acggaacacacttcactttgaatctatctgctcttcgttccaaaattgcaagtgctttta 359 | ||| |||| |||| |||| |||| ||||| || ||||| |||||| |||||||| Sbjct: 408 aaggaccacaattcagcctgaacttatccgctctccggtccaagattgcatctgctttta 467 Query: 360 agtttggccctgatgctgacttcattctcacttacactgatgaggatgggggatgttgtc 419 ||||||| | |||| ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 468 agtttggttcggatgtcgacttcattctgacttacactgatgagg----gggatattgtc 523 Query: 420 atgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccctctc 479 |||||||| ||||| || || |||||||||| ||||| ||||||||||||||||| ||| Sbjct: 524 atgctggatgatgatgatgatctgcatgatgctgctattcatcagaaactgaaccccctc 583 Query: 480 aggattaatgttcaggtaaagaatagcca 508 ||||||||||||||| |||| || ||||| Sbjct: 584 aggattaatgttcagttaaacaacagcca 612 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 27 ccgccgctgcggcttacggctacgcagctctc 58 |||||||||||||| ||||||||||||||||| Sbjct: 109 ccgccgctgcggctcacggctacgcagctctc 140
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 163 bits (82), Expect = 1e-36 Identities = 206/246 (83%), Gaps = 1/246 (0%) Strand = Plus / Minus Query: 263 tatggtgacacacttaagaggttcaatggctatgtcaacggaacacacttcactttgaat 322 |||||||| || |||||||||||| ||| ||||| | ||| |||| |||| |||| Sbjct: 23004653 tatggtgaaactcttaagaggttcggtgggtatgtgcaaggaccacaattcagcctgaac 23004594 Query: 323 ctatctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttc 382 |||| ||||| || ||||| |||||| ||||||||||||||| | |||| |||||| Sbjct: 23004593 ttatccgctctccggtccaagattgcatctgcttttaagtttggttcggatgtcgacttc 23004534 Query: 383 attctcacttacactgatgaggatgggggatgttgtcatgctggacgatgacgaggactt 442 ||||| |||||||||||||||||||||| || ||||||||||||| ||||| || || | Sbjct: 23004533 attctgacttacactgatgaggatgggg-atattgtcatgctggatgatgatgatgatct 23004475 Query: 443 gcatgatgcagctatccatcagaaactgaaccctctcaggattaatgttcaggtaaagaa 502 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 23004474 gcatgatgctgctattcatcagaaactgaaccccctcaggattaatgttcagttaaacaa 23004415 Query: 503 tagcca 508 ||||| Sbjct: 23004414 cagcca 23004409 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 27 ccgccgctgcggcttacggctacgcagctctc 58 |||||||||||||| ||||||||||||||||| Sbjct: 23006876 ccgccgctgcggctcacggctacgcagctctc 23006845 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 180 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 239 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 23006697 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 23006638 Query: 240 gggacgtcgtcgtcaaggt 258 ||||||||||| ||||||| Sbjct: 23006637 gggacgtcgtcctcaaggt 23006619
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 163 bits (82), Expect = 1e-36 Identities = 206/246 (83%), Gaps = 1/246 (0%) Strand = Plus / Minus Query: 263 tatggtgacacacttaagaggttcaatggctatgtcaacggaacacacttcactttgaat 322 |||||||| || |||||||||||| ||| ||||| | ||| |||| |||| |||| Sbjct: 29050 tatggtgaaactcttaagaggttcggtgggtatgtgcaaggaccacaattcagcctgaac 28991 Query: 323 ctatctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttc 382 |||| ||||| || ||||| |||||| ||||||||||||||| | |||| |||||| Sbjct: 28990 ttatccgctctccggtccaagattgcatctgcttttaagtttggttcggatgtcgacttc 28931 Query: 383 attctcacttacactgatgaggatgggggatgttgtcatgctggacgatgacgaggactt 442 ||||| |||||||||||||||||||||| || ||||||||||||| ||||| || || | Sbjct: 28930 attctgacttacactgatgaggatgggg-atattgtcatgctggatgatgatgatgatct 28872 Query: 443 gcatgatgcagctatccatcagaaactgaaccctctcaggattaatgttcaggtaaagaa 502 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 28871 gcatgatgctgctattcatcagaaactgaaccccctcaggattaatgttcagttaaacaa 28812 Query: 503 tagcca 508 ||||| Sbjct: 28811 cagcca 28806 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 27 ccgccgctgcggcttacggctacgcagctctc 58 |||||||||||||| ||||||||||||||||| Sbjct: 31273 ccgccgctgcggctcacggctacgcagctctc 31242 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 180 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 239 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 31094 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 31035 Query: 240 gggacgtcgtcgtcaaggt 258 ||||||||||| ||||||| Sbjct: 31034 gggacgtcgtcctcaaggt 31016
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 163 bits (82), Expect = 1e-36 Identities = 206/246 (83%), Gaps = 1/246 (0%) Strand = Plus / Minus Query: 263 tatggtgacacacttaagaggttcaatggctatgtcaacggaacacacttcactttgaat 322 |||||||| || |||||||||||| ||| ||||| | ||| |||| |||| |||| Sbjct: 124455 tatggtgaaactcttaagaggttcggtgggtatgtgcaaggaccacaattcagcctgaac 124396 Query: 323 ctatctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttc 382 |||| ||||| || ||||| |||||| ||||||||||||||| | |||| |||||| Sbjct: 124395 ttatccgctctccggtccaagattgcatctgcttttaagtttggttcggatgtcgacttc 124336 Query: 383 attctcacttacactgatgaggatgggggatgttgtcatgctggacgatgacgaggactt 442 ||||| |||||||||||||||||||||| || ||||||||||||| ||||| || || | Sbjct: 124335 attctgacttacactgatgaggatgggg-atattgtcatgctggatgatgatgatgatct 124277 Query: 443 gcatgatgcagctatccatcagaaactgaaccctctcaggattaatgttcaggtaaagaa 502 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 124276 gcatgatgctgctattcatcagaaactgaaccccctcaggattaatgttcagttaaacaa 124217 Query: 503 tagcca 508 ||||| Sbjct: 124216 cagcca 124211 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 27 ccgccgctgcggcttacggctacgcagctctc 58 |||||||||||||| ||||||||||||||||| Sbjct: 126678 ccgccgctgcggctcacggctacgcagctctc 126647 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 180 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 239 |||| |||||||||| |||| ||||| || ||| || ||||||||| | |||||| | Sbjct: 126499 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 126440 Query: 240 gggacgtcgtcgtcaaggt 258 ||||||||||| ||||||| Sbjct: 126439 gggacgtcgtcctcaaggt 126421
>gb|AY596599.1| Saccharum officinarum clone SCEPLR1008G04, complete sequence Length = 3065 Score = 99.6 bits (50), Expect = 1e-17 Identities = 117/138 (84%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 356 tttaagtttggccctgatgctgacttcattctcacttacactgatgaggatgggggatgt 415 ||||||||||| |||||||||||||| |||| |||||| | ||||||||| || ||| | Sbjct: 371 tttaagtttggtgctgatgctgacttcgttctgacttacgccgatgaggat-ggtgatat 429 Query: 416 tgtcatgctggacgatgacgaggacttgcatgatgcagctatccatcagaaactgaaccc 475 ||||||||| || ||||| || ||||||| |||||||||| | | ||||||| | ||||| Sbjct: 430 tgtcatgctagatgatgatgatgacttgcgtgatgcagctctgcgtcagaaattaaaccc 489 Query: 476 tctcaggattaatgttca 493 ||| ||||||| |||||| Sbjct: 490 tctgaggattactgttca 507 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 18 ccaccaccaccgccgctgcggcttacggctacgcagc 54 ||||||||||| | ||||||||| ||||||||||||| Sbjct: 15 ccaccaccaccactgctgcggctcacggctacgcagc 51 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 239 tgggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggtt 285 ||||||||| | ||||||||||||||||||| || ||||| ||||| Sbjct: 254 tgggacgtcaccttcaaggtcaaatatggtgatacgcttaaaaggtt 300
>ref|XM_472873.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2646 Score = 54.0 bits (27), Expect = 6e-04 Identities = 88/107 (82%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 327 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 386 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 134 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 193 Query: 387 tcacttacactgatgaggatgggggatgttgtcatgctggacgatga 433 |||| || |||||||||||||||| |||||||||| ||||| ||||| Sbjct: 194 tcacctatactgatgaggatgggg-atgttgtcatactggatgatga 239
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 54.0 bits (27), Expect = 6e-04 Identities = 88/107 (82%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 327 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 386 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 11103 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 11044 Query: 387 tcacttacactgatgaggatgggggatgttgtcatgctggacgatga 433 |||| || ||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 11043 tcacctatactgatgaggatggg-gatgttgtcatactggatgatga 10998
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 6e-04 Identities = 88/107 (82%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 327 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 386 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 23846230 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 23846171 Query: 387 tcacttacactgatgaggatgggggatgttgtcatgctggacgatga 433 |||| || |||||||||||||||| |||||||||| ||||| ||||| Sbjct: 23846170 tcacctatactgatgaggatgggg-atgttgtcatactggatgatga 23846125
>dbj|AK070908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064I21, full insert sequence Length = 3123 Score = 54.0 bits (27), Expect = 6e-04 Identities = 88/107 (82%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 327 ctgctcttcgttccaaaattgcaagtgcttttaagtttggccctgatgctgacttcattc 386 |||||||||| || || ||||| |||||||||||||| || ||| |||| || | | Sbjct: 266 ctgctcttcggtcaaagattgcgagtgcttttaagttcaatccagatactgagtttgtac 325 Query: 387 tcacttacactgatgaggatgggggatgttgtcatgctggacgatga 433 |||| || |||||||||||||||| |||||||||| ||||| ||||| Sbjct: 326 tcacctatactgatgaggatgggg-atgttgtcatactggatgatga 371
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctgcggc 39 ||||||||||||||||||||||||| Sbjct: 301584 ccgccaccaccaccgccgctgcggc 301560
>dbj|AB044554.1| Staphylococcus aureus prophage phiPV83 proviral DNA, complete sequence Length = 45636 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 336 gttccaaaattgcaagtgctttt 358 ||||||||||||||||||||||| Sbjct: 3767 gttccaaaattgcaagtgctttt 3745
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 196551 ccgccaccaccaccgccgctgc 196530
>ref|NM_010135.1| Mus musculus enabled homolog (Drosophila) (Enah), mRNA Length = 2899 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 1490 ccgccaccaccaccgccgctgc 1511
>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11, complete sequence Length = 103615 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 12717 ccgccaccaccaccgccgctgc 12738
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 98790 ccgccaccaccaccgccgctgc 98811
>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence Length = 197949 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 143834 ccgccaccaccaccgccgctgc 143855
>gb|BC051877.1| Homo sapiens ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila), mRNA (cDNA clone MGC:60258 IMAGE:5742498), complete cds Length = 2165 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ggcccgccaccaccaccgccgc 33 |||||||||||||||||||||| Sbjct: 521 ggcccgccaccaccaccgccgc 500
>gb|AC022498.18| Homo sapiens 3 BAC RP11-430L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 122437 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 60738 ccgccaccaccaccgccgctgc 60759
>ref|NM_005744.2| Homo sapiens ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) (ARIH1), mRNA Length = 2178 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ggcccgccaccaccaccgccgc 33 |||||||||||||||||||||| Sbjct: 586 ggcccgccaccaccaccgccgc 565
>gb|AC079322.5| Homo sapiens chromosome 15, clone RP11-1007O24, complete sequence Length = 171550 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 ggcccgccaccaccaccgccgc 33 |||||||||||||||||||||| Sbjct: 93427 ggcccgccaccaccaccgccgc 93448
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 28735 ccgccaccaccaccgccgctgc 28714
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 120268 ccgccaccaccaccgccgctgc 120247
>gb|AC016659.39| Homo sapiens chromosome 15 clone RP11-386P20, complete sequence Length = 181470 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ggcccgccaccaccaccgccgc 33 |||||||||||||||||||||| Sbjct: 74116 ggcccgccaccaccaccgccgc 74095
>gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J24, complete sequence Length = 184118 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 catcagaaactgaaccctctca 480 |||||||||||||||||||||| Sbjct: 144237 catcagaaactgaaccctctca 144216
>gb|AC008935.8|AC008935 Homo sapiens chromosome 5 clone CTD-2308L13, complete sequence Length = 102477 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 459 catcagaaactgaaccctctca 480 |||||||||||||||||||||| Sbjct: 47232 catcagaaactgaaccctctca 47253
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 2463536 ccgccaccaccaccgccgctgc 2463515 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccgctgcg 37 ||||||||||||| ||||||||||| Sbjct: 4281965 gcccgccaccaccgccgccgctgcg 4281941
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 18131535 ccgccaccaccaccgccgctgc 18131556
>dbj|AK026340.1| Homo sapiens cDNA: FLJ22687 fis, clone HSI10991 Length = 1350 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 ggcccgccaccaccaccgccgc 33 |||||||||||||||||||||| Sbjct: 258 ggcccgccaccaccaccgccgc 279
>emb|AJ243190.1|HSA243190 Homo sapiens mRNA for UbcH 7-binding protein (HHari gene) Length = 2178 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ggcccgccaccaccaccgccgc 33 |||||||||||||||||||||| Sbjct: 586 ggcccgccaccaccaccgccgc 565
>gb|AF072832.1|AF072832 Homo sapiens UbcH 7-binding protein mRNA, complete cds Length = 1674 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ggcccgccaccaccaccgccgc 33 |||||||||||||||||||||| Sbjct: 272 ggcccgccaccaccaccgccgc 251
>gb|U72523.1|MMU72523 Mus musculus neural variant mena+++ protein (Mena) mRNA, complete cds Length = 2899 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 1490 ccgccaccaccaccgccgctgc 1511
>gb|U72522.1|MMU72522 Mus musculus neural variant mena++ protein (Mena) mRNA, complete cds Length = 2854 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 1445 ccgccaccaccaccgccgctgc 1466
>gb|U72521.1|MMU72521 Mus musculus neural variant mena+ protein (Mena) mRNA, complete cds Length = 2842 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 1433 ccgccaccaccaccgccgctgc 1454
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 2463487 ccgccaccaccaccgccgctgc 2463466 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccgctgcg 37 ||||||||||||| ||||||||||| Sbjct: 4282786 gcccgccaccaccgccgccgctgcg 4282762
>emb|X69722.1|MMIRS1 M.musculus mRNA for insulin receptor substrate 1 Length = 5246 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 3846 ccgccaccaccaccgccgctgc 3825
>dbj|D10727.1|MUSNDPP1 Mus musculus mRNA for NDPP-1 protein, complete cds Length = 4308 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccgccaccaccaccgccgctgc 36 |||||||||||||||||||||| Sbjct: 972 ccgccaccaccaccgccgctgc 993
>ref|NM_195030.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBb0015J03.2), mRNA Length = 3000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccgctgcg 37 ||||||||||||| ||||||||||| Sbjct: 1088 gcccgccaccaccgccgccgctgcg 1064
>ref|XM_479614.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tcgcgtccctcgacgccgccg 77 ||||||||||||||||||||| Sbjct: 495 tcgcgtccctcgacgccgccg 515
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgctg 35 ||||||||||||||||||||| Sbjct: 183295 ccgccaccaccaccgccgctg 183275
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence Length = 186582 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 agataaaatcagtaattgatg 606 ||||||||||||||||||||| Sbjct: 39923 agataaaatcagtaattgatg 39943
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccgctgcg 37 ||||||||||||| ||||||||||| Sbjct: 49506 gcccgccaccaccgccgccgctgcg 49482
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 gcccgccaccaccaccgccgctgcg 37 ||||||||||||| ||||||||||| Sbjct: 10495 gcccgccaccaccgccgccgctgcg 10519
>dbj|AB229203.1| Aspergillus oryzae cDNA, contig sequence: AoEST6082 Length = 699 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcccgccac 21 ||||||||||||||||||||| Sbjct: 3 attcggcacgaggcccgccac 23
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 tcgcgtccctcgacgccgccg 77 ||||||||||||||||||||| Sbjct: 29365036 tcgcgtccctcgacgccgccg 29365016
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ccctcgacgccgccgccgctg 83 ||||||||||||||||||||| Sbjct: 5175256 ccctcgacgccgccgccgctg 5175276
>dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B21, full insert sequence Length = 1221 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tcgcgtccctcgacgccgccg 77 ||||||||||||||||||||| Sbjct: 495 tcgcgtccctcgacgccgccg 515
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 tcgcgtccctcgacgccgccg 77 ||||||||||||||||||||| Sbjct: 27958 tcgcgtccctcgacgccgccg 27938
>ref|NM_118602.3| Arabidopsis thaliana zinc ion binding AT4G24690 mRNA, complete cds Length = 2604 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 371 gatgctgacttcattctcacttacactgatgaggatgggg 410 |||||||| || | ||| |||||| ||||||||||||||| Sbjct: 309 gatgctgaattgagtctgacttactctgatgaggatgggg 348
>ref|NM_119506.2| Arabidopsis thaliana PAA1; ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism AT4G33520 (PAA1) transcript variant AT4G33520.1 mRNA, complete cds Length = 1075 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 444 ccgccaccaccaccgccgct 425
>ref|NM_202946.1| Arabidopsis thaliana PAA1 AT4G33520 (PAA1) transcript variant AT4G33520.2 mRNA, complete cds Length = 3248 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 465 ccgccaccaccaccgccgct 446
>ref|NM_202947.1| Arabidopsis thaliana PAA1 AT4G33520 (PAA1) transcript variant AT4G33520.3 mRNA, complete cds Length = 3248 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 465 ccgccaccaccaccgccgct 446
>ref|NM_187500.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgcgtccctcgacgccgccgccgc 81 ||||||| |||||||||||||||| Sbjct: 1167 cgcgtccatcgacgccgccgccgc 1144
>ref|NM_006721.2| Homo sapiens adenosine kinase (ADK), transcript variant ADK-long, mRNA Length = 2018 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 700 ttcactttgaatctatctgc 719
>ref|NM_001123.2| Homo sapiens adenosine kinase (ADK), transcript variant ADK-short, mRNA Length = 2082 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 764 ttcactttgaatctatctgc 783
>gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0117L20 map S2137, complete sequence Length = 125303 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cccgccaccaccaccgccgc 33 |||||||||||||||||||| Sbjct: 86898 cccgccaccaccaccgccgc 86917
>gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-199I14, complete sequence Length = 152776 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 95309 ccgccaccaccaccgccgct 95290
>ref|XM_957679.1| Neurospora crassa OR74A hypothetical protein (NCU05667.1) partial mRNA Length = 660 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 388 gccaccaccaccgccgctgc 407
>gb|BC003568.1| Homo sapiens adenosine kinase, transcript variant ADK-short, mRNA (cDNA clone MGC:2085 IMAGE:3544131), complete cds Length = 1414 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 676 ttcactttgaatctatctgc 695
>ref|XM_325521.1| Neurospora crassa OR74A hypothetical protein (NCU05667.1) partial mRNA Length = 660 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 388 gccaccaccaccgccgctgc 407
>ref|NM_018774.1| Mus musculus polyhomeotic-like 2 (Drosophila) (Phc2), mRNA Length = 3832 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 173 gccaccaccaccgccgctgc 154
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cctgagcgcgccgccgttcg 212 |||||||||||||||||||| Sbjct: 2036917 cctgagcgcgccgccgttcg 2036936
>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete sequence Length = 190939 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 catatcagaacctttgagat 639 |||||||||||||||||||| Sbjct: 125323 catatcagaacctttgagat 125304
>gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromosome 7, complete sequence Length = 190856 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 catatcagaacctttgagat 639 |||||||||||||||||||| Sbjct: 190245 catatcagaacctttgagat 190226
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ccgctgtccgaggtttccgg 97 |||||||||||||||||||| Sbjct: 640270 ccgctgtccgaggtttccgg 640251
>gb|AY915332.1| Schistosoma japonicum SJCHGC04939 protein mRNA, partial cds Length = 1470 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 659 actagctcatttaaaatcag 678 |||||||||||||||||||| Sbjct: 128 actagctcatttaaaatcag 147
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 catgctggacgatgacgagg 438 |||||||||||||||||||| Sbjct: 677446 catgctggacgatgacgagg 677427
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccg 32 |||||||||||||||||||| Sbjct: 10611974 gcccgccaccaccaccgccg 10611955 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgcgtccctcgacgccgccgccgc 81 ||||||| |||||||||||||||| Sbjct: 9012391 cgcgtccatcgacgccgccgccgc 9012414
>ref|XM_883455.1| Leishmania major strain Friedlin hypothetical protein (L3291.01) partial mRNA Length = 9192 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 gcccgccaccaccaccgccgctgc 36 |||| ||||||||||||||||||| Sbjct: 7447 gcccaccaccaccaccgccgctgc 7470
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccgctgc 36 |||| ||||||||||||||||||| Sbjct: 19638 gcccaccaccaccaccgccgctgc 19615
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence Length = 234881 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cccgccaccaccaccgccgc 33 |||||||||||||||||||| Sbjct: 196486 cccgccaccaccaccgccgc 196467
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccg 32 |||||||||||||||||||| Sbjct: 28888 gcccgccaccaccaccgccg 28869
>gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, complete sequence Length = 198781 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 152189 ttcactttgaatctatctgc 152170
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 cgaggcccgccaccaccaccgccg 32 ||||||||||||||||| |||||| Sbjct: 96018 cgaggcccgccaccaccgccgccg 95995
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 147449 ccgccaccaccaccgccgct 147430
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 371 gatgctgacttcattctcacttacactgatgaggatgggg 410 |||||||| || | ||| |||||| ||||||||||||||| Sbjct: 16005 gatgctgaattgagtctgacttactctgatgaggatgggg 16044
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 371 gatgctgacttcattctcacttacactgatgaggatgggg 410 |||||||| || | ||| |||||| ||||||||||||||| Sbjct: 39503 gatgctgaattgagtctgacttactctgatgaggatgggg 39464
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 82670 ccgccaccaccaccgccgct 82651
>emb|AL031394.1|ATT16L1 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L1 (ESSAII project) Length = 98124 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 131 ccgccaccaccaccgccgct 112
>emb|AJ493263.1|ABA493263 Acipenser baeri partial mRNA for keratin type IIE (krt2 gene) Length = 1835 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 1412 gccaccaccaccgccgctgc 1393
>emb|AJ010321.1|CAJ10321 Caulobacter crescentus partial tig gene and clpP, cicA, clpX, lon genes Length = 6710 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gacgtcgtcgtcaaggtcaa 261 |||||||||||||||||||| Sbjct: 298 gacgtcgtcgtcaaggtcaa 317
>gb|BT008425.1| Arabidopsis thaliana At4g24690 gene, complete cds Length = 2115 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 371 gatgctgacttcattctcacttacactgatgaggatgggg 410 |||||||| || | ||| |||||| ||||||||||||||| Sbjct: 151 gatgctgaattgagtctgacttactctgatgaggatgggg 190
>gb|BT007895.1| Synthetic construct Homo sapiens adenosine kinase mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|BT006788.1| Homo sapiens adenosine kinase mRNA, complete cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AY140081.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 2438 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 371 gatgctgacttcattctcacttacactgatgaggatgggg 410 |||||||| || | ||| |||||| ||||||||||||||| Sbjct: 286 gatgctgaattgagtctgacttactctgatgaggatgggg 325
>gb|AY128759.1| Arabidopsis thaliana putative protein (At4g24690) mRNA, complete cds Length = 2144 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 371 gatgctgacttcattctcacttacactgatgaggatgggg 410 |||||||| || | ||| |||||| ||||||||||||||| Sbjct: 151 gatgctgaattgagtctgacttactctgatgaggatgggg 190
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cctcgacgccgccgccgctg 83 |||||||||||||||||||| Sbjct: 927911 cctcgacgccgccgccgctg 927892
>gb|AE005869.1| Caulobacter crescentus CB15 section 195 of 359 of the complete genome Length = 10960 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gacgtcgtcgtcaaggtcaa 261 |||||||||||||||||||| Sbjct: 10187 gacgtcgtcgtcaaggtcaa 10168
>emb|CR597304.1| full-length cDNA clone CS0DC028YN22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 773 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 86 ttcactttgaatctatctgc 105
>gb|AY093320.1| Arabidopsis thaliana metal-transporting P-type ATPase (At4g33520) mRNA, complete cds Length = 746 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 368 ccgccaccaccaccgccgct 349
>gb|AC022540.9| Homo sapiens chromosome 10 clone RP11-46O21, complete sequence Length = 71736 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 60792 ttcactttgaatctatctgc 60811
>gb|AY062827.1| Arabidopsis thaliana putative protein (At4g24690; F22K18.110) mRNA, complete cds Length = 2283 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 371 gatgctgacttcattctcacttacactgatgaggatgggg 410 |||||||| || | ||| |||||| ||||||||||||||| Sbjct: 229 gatgctgaattgagtctgacttactctgatgaggatgggg 268
>gb|AY059869.1| Arabidopsis thaliana metal-transporting P-type ATPase (At4g33520; F17M5.280) mRNA, complete cds Length = 1037 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 445 ccgccaccaccaccgccgct 426
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgcgtccctcgacgccgccgccgc 81 ||||||| |||||||||||||||| Sbjct: 137252 cgcgtccatcgacgccgccgccgc 137275
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgcgtccctcgacgccgccgccgc 81 ||||||| |||||||||||||||| Sbjct: 19427 cgcgtccatcgacgccgccgccgc 19450
>dbj|AK051465.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130050K19 product:polyhomeotic-like 2 (Drosophila), full insert sequence Length = 775 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 277 gccaccaccaccgccgctgc 258
>gb|AY050483.1| Prunus avium putative glycine-rich RNA-binding protein mRNA, complete cds Length = 823 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 328 ccgccaccaccaccgccgct 309
>gb|AY335649.1| Synthetic construct Homo sapiens adenosine kinase (ADK) mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cccgccaccaccaccgccgc 33 |||||||||||||||||||| Sbjct: 8183543 cccgccaccaccaccgccgc 8183562
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcccgccaccaccaccgccg 32 |||||||||||||||||||| Sbjct: 10610075 gcccgccaccaccaccgccg 10610056 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgcgtccctcgacgccgccgccgc 81 ||||||| |||||||||||||||| Sbjct: 9010226 cgcgtccatcgacgccgccgccgc 9010249
>gb|AC156355.4| Carollia perspicillata clone 201H7, complete sequence Length = 45928 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 667 atttaaaatcagcccttgat 686 |||||||||||||||||||| Sbjct: 39261 atttaaaatcagcccttgat 39280
>emb|BX826454.1|CNS0A34R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 375 ccgccaccaccaccgccgct 356
>gb|AY892031.1| Synthetic construct Homo sapiens clone FLH110836.01L adenosine kinase (ADK) mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AY892030.1| Synthetic construct Homo sapiens clone FLH110835.01L adenosine kinase (ADK) mRNA, partial cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AY889573.1| Synthetic construct Homo sapiens clone FLH110840.01X adenosine kinase (ADK) mRNA, complete cds Length = 1038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 577 ttcactttgaatctatctgc 596
>gb|AE005133.1| Halobacterium sp. NRC-1 section 164 of 170 of the complete genome Length = 12130 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cgccgccgccgctgtccgag 89 |||||||||||||||||||| Sbjct: 10128 cgccgccgccgctgtccgag 10109
>gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, complete sequence Length = 118313 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 catatcagaacctttgagat 639 |||||||||||||||||||| Sbjct: 36455 catatcagaacctttgagat 36436
>dbj|AK108185.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-B08, full insert sequence Length = 1136 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgcgtccctcgacgccgccgccgc 81 ||||||| |||||||||||||||| Sbjct: 616 cgcgtccatcgacgccgccgccgc 593
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cgccgccgccgctgtccgag 89 |||||||||||||||||||| Sbjct: 112871 cgccgccgccgctgtccgag 112852
>gb|BC057571.1| Mus musculus polyhomeotic-like 2 (Drosophila), mRNA (cDNA clone MGC:66958 IMAGE:6410302), complete cds Length = 3897 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 219 gccaccaccaccgccgctgc 200
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete sequence Length = 231197 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 actgatgaggatgggggatg 414 |||||||||||||||||||| Sbjct: 86873 actgatgaggatgggggatg 86892
>gb|U81491.1|MMU81491 Mus musculus polyhomeotic (mPh2) mRNA, complete cds Length = 3832 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 173 gccaccaccaccgccgctgc 154
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cccgccaccaccaccgccgc 33 |||||||||||||||||||| Sbjct: 8254306 cccgccaccaccaccgccgc 8254325
>gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complete sequence Length = 212677 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 16592 gccaccaccaccgccgctgc 16611
>gb|U90339.1|HSU90339 Human adenosine kinase short form mRNA, complete cds Length = 1172 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 670 ttcactttgaatctatctgc 689
>gb|U90338.1|HSU90338 Human adenosine kinase long form mRNA, complete cds Length = 1181 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 678 ttcactttgaatctatctgc 697
>gb|U33936.1|HSU33936 Human adenosine kinase mRNA, complete cds Length = 1096 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 635 ttcactttgaatctatctgc 654
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 667 atttaaaatcagcccttgat 686 |||||||||||||||||||| Sbjct: 708434 atttaaaatcagcccttgat 708453
>gb|U50196.1|HSU50196 Human adenosine kinase mRNA, complete cds Length = 1809 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ttcactttgaatctatctgc 330 |||||||||||||||||||| Sbjct: 760 ttcactttgaatctatctgc 779
>emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on chromosome 4, complete sequence Length = 174305 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 167669 gccaccaccaccgccgctgc 167650
>gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, complete sequence Length = 173511 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gccaccaccaccgccgctgc 36 |||||||||||||||||||| Sbjct: 89225 gccaccaccaccgccgctgc 89206
>emb|AL833771.4| Mouse DNA sequence from clone RP23-228H14 on chromosome 2, complete sequence Length = 189283 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gatgaggatgggggatgttg 417 |||||||||||||||||||| Sbjct: 10153 gatgaggatgggggatgttg 10134
>dbj|D89981.1| Arabidopsis thaliana mRNA for metal-transporting P-type ATPase, complete cds Length = 3229 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgccaccaccaccgccgct 34 |||||||||||||||||||| Sbjct: 465 ccgccaccaccaccgccgct 446 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,470,095 Number of Sequences: 3902068 Number of extensions: 6470095 Number of successful extensions: 306090 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 303668 Number of HSP's gapped (non-prelim): 2404 length of query: 692 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 669 effective length of database: 17,143,297,704 effective search space: 11468866163976 effective search space used: 11468866163976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)