ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3m01 |
|---|---|
| Clone Library Name | barley_pub |
>ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precursor| Length = 253 Score = 39.3 bits (90), Expect = 0.009 Identities = 27/93 (29%), Positives = 38/93 (40%) Frame = +2 Query: 14 RPFPSPSDPIPKIPFCRLLLRGPSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQ 193 RP P +P+ AEG D+ TD GG GG EN E Sbjct: 20 RPMPEDEEPV------------------AEGGDEETTDDAGGDGGEEEN------EGEEH 55 Query: 194 AVGQEPGQELVGEAEESADREGNGDDARKEDSG 292 A ++ G E G+ E + + +DA +ED+G Sbjct: 56 AGDEDAGGEDTGKEENTGHEDAGEEDAGEEDAG 88
>ISW2_ORYSA (Q7G8Y3) Putative chromatin remodelling complex ATPase chain (EC| 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) Length = 1107 Score = 36.2 bits (82), Expect = 0.077 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = +2 Query: 92 MAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPG--QELVGEAEESADREGNG 265 +++ GE++ + G+G G E E EEA A G+ G +E V E E A G G Sbjct: 14 VSSSGEEEEEQSDGAGSGSGEEED-EEEEEAPAAAAGEAAGGEEEEVDEEEIEAVTTGAG 72 Query: 266 DDARKEDSG 292 D +E+SG Sbjct: 73 ADEEEEESG 81
>NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilament light| polypeptide) (NF-L) Length = 555 Score = 35.8 bits (81), Expect = 0.10 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = +2 Query: 152 VENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDDARKEDSGCK 298 +E T+EAA+ +A E G+E E EE + E G++A +E+ G K Sbjct: 455 IEETIEAAKAGEAKAAPAEEGEE--EEKEEGEEEEAGGEEAEEEEEGAK 501
>ZMY15_HUMAN (Q9H091) Zinc finger MYND domain-containing protein 15| Length = 703 Score = 32.7 bits (73), Expect = 0.86 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = +2 Query: 101 EGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQEL--VGEAEESADREGNGDDA 274 E ED+ + G G E +E E+ L +E QE GE+EE+A G G D Sbjct: 119 EEEDEEEEKREDGGAGSTEK-VEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDG 177 Query: 275 RKED 286 +ED Sbjct: 178 CRED 181
>ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protein-associated| with nuclear matrix of 75 kDa) Length = 580 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +2 Query: 101 EGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDDA 274 EGE+ + G G E T EAA AVG+ G EAEE + EG + A Sbjct: 510 EGEEAGSVEEEGDVEGE-EGTAEAAAAGEADAVGEAEGAGEAEEAEEEEEEEGTQEFA 566
>NFL_XENLA (P35616) Neurofilament triplet L protein (Neurofilament light| polypeptide) (NF-L) Length = 543 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = +2 Query: 95 AAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEE---SADREGNG 265 A E E++ + G G E E EEA + +E GQE E EE A+ EG+G Sbjct: 461 APEEEEEEAAEEEGEGGEEAEEEGEEGEEAKEEEAEEEGGQEKEEEGEEGEGEAEAEGDG 520 Query: 266 DD 271 ++ Sbjct: 521 EE 522
>MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substrate (MARCKS)| Length = 280 Score = 31.6 bits (70), Expect = 1.9 Identities = 27/102 (26%), Positives = 41/102 (40%) Frame = +2 Query: 125 DSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDDARKEDSGCKXX 304 +S GGA E E A A +A G E G+ AEE++ +A KE++G Sbjct: 147 ESEGGAAAAAEGGKEEAAAAAPEAAGGEEGK---AAAEEASAAAAGSREAAKEEAG-DSQ 202 Query: 305 XXXXXXXXXXXXXXAVATAALQEEMRVLLASVPEGAGASFTA 430 A AA +++ + E AGA+ T+ Sbjct: 203 EAKSDEAAPEKATGEEAPAAEEQQQQQQQEKAAEEAGAAATS 244 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +2 Query: 86 ATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNG 265 A AAEG + + A GG E A E + A +E +E G+++E+ E Sbjct: 152 AAAAAEGGKEEAAAAAPEAAGGEEGKAAAEEASAAAAGSREAAKEEAGDSQEAKSDEAAP 211 Query: 266 DDARKEDS 289 + A E++ Sbjct: 212 EKATGEEA 219
>LIN10_CAEEL (O17583) Protein lin-10 (Abnormal cell lineage protein 10)| Length = 982 Score = 31.6 bits (70), Expect = 1.9 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = -1 Query: 189 RIASSAASRVFSTPPPAPPTESVSFLSSPSAAMVAEGPRKRRRQKGIFGIGSEGEGK 19 +IA SAA F +PPP+ P+ S S PS A+ P + + G G E K Sbjct: 436 QIAQSAAPTPFDSPPPSMPSTS----SGPSGALAPPPPPSHPIPRRVSGNGWPEENK 488
>SYD_THETH (P36419) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 580 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 134 GGAGGGVENTLEAAEEAILQAVGQEPGQELV 226 GG GGV LE EA+LQA PG L+ Sbjct: 357 GGFSGGVAKFLEPVREALLQATEARPGDTLL 387
>SYD_THET8 (Q5SKD2) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 580 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 134 GGAGGGVENTLEAAEEAILQAVGQEPGQELV 226 GG GGV LE EA+LQA PG L+ Sbjct: 357 GGFSGGVAKFLEPVREALLQATEARPGDTLL 387
>SYD_THET2 (Q72KH6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 580 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 134 GGAGGGVENTLEAAEEAILQAVGQEPGQELV 226 GG GGV LE EA+LQA PG L+ Sbjct: 357 GGFSGGVAKFLEPVREALLQATEARPGDTLL 387
>FA43A_MOUSE (Q8BUP8) Protein FAM43A| Length = 424 Score = 31.2 bits (69), Expect = 2.5 Identities = 25/81 (30%), Positives = 36/81 (44%) Frame = +2 Query: 41 IPKIPFCRLLLRGPSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQE 220 IP +P +LLL GP + S G E+ L +E LQ +E ++ Sbjct: 221 IPLVPLRKLLLHGPCCYKPPVERSR----SAPKLGSITEDLLGEQQEEELQEEEEEHLED 276 Query: 221 LVGEAEESADREGNGDDARKE 283 + E EE D G+GD A +E Sbjct: 277 CL-EEEEEEDGVGDGDPAEEE 296
>NOG2_NEUCR (Q7SHR8) Nucleolar GTP-binding protein 2| Length = 619 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Frame = +2 Query: 80 PSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELV---GEAEESAD 250 P+ T A+ GED + D AG ++ E E A + + ++++ ++E D Sbjct: 512 PATTPASAGEDAKEEDPENFAGFDSDSDSEVEEAAEEKGEEKSTAEDMIPLDASSDEEED 571 Query: 251 REGNGDDARKEDSG 292 E G D ++ G Sbjct: 572 GEEEGSDVEDDEEG 585
>NCKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1099 Score = 30.8 bits (68), Expect = 3.3 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Frame = +2 Query: 83 SATMAAE--GEDKNDTDSV--GGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESAD 250 S ++AE GE KND V GG G ++ E EE + +E QE E EE + Sbjct: 830 SQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEE 889 Query: 251 REGN 262 +GN Sbjct: 890 EKGN 893
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 30.8 bits (68), Expect = 3.3 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = +2 Query: 101 EGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDDARK 280 EGE ++ GG G G E+ L+ A Q+PGQ E E+ + EG +A+ Sbjct: 1873 EGEGISERGETGGQGSGHEDNLQGEAAA---GGDQDPGQSDGAEGIEAPEAEG---EAQP 1926 Query: 281 EDSG 292 E G Sbjct: 1927 ESEG 1930
>MAML3_HUMAN (Q96JK9) Mastermind-like protein 3 (Mam-3)| Length = 1133 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -1 Query: 213 PGSCPTACRIASSAASRVFSTPPPAPPTESVSFLSSPSAAMVA 85 P S P C + S TP APP +L +P+A VA Sbjct: 406 PASSPANCAVQSPQTPNQAHTPGQAPPRPGNGYLLNPAAVTVA 448
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT| motif-binding factor) (AT-binding transcription factor 1) Length = 3703 Score = 30.8 bits (68), Expect = 3.3 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = +2 Query: 38 PIPKIPFCRLLLRGPSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQ 217 PI +P L S T ++EG+D + G + E E A +A +E + Sbjct: 414 PITSVPLGAL---ASSPTKSSEGKDSGAAEGEKQEVGDGDCFSEKVEPAEEEAEEEEEEE 470 Query: 218 ELVGEAEESADREGNGDDARKEDSGCK 298 E E EE + E +ED GCK Sbjct: 471 EAEEEEEEEEEEE-----EEEEDEGCK 492
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 101 EGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDDARK 280 EGED+ D G G E E +E G++ G++ E E+ + EG+ + Sbjct: 549 EGEDEGDEGEDEGEDEGDEGEDEGEDEG---DEGEDEGEDEGDEGEDEGEDEGDEGEDEG 605 Query: 281 EDSG 292 ED G Sbjct: 606 EDEG 609 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/64 (31%), Positives = 27/64 (42%) Frame = +2 Query: 101 EGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDDARK 280 EGED+ D G G E E +E G++ G E E +E D GD+ + Sbjct: 635 EGEDEGDEGEDEGDEGEDEGD-EGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGDE 693 Query: 281 EDSG 292 D G Sbjct: 694 GDEG 697
>CENPB_HUMAN (P07199) Major centromere autoantigen B (Centromere protein B)| (CENP-B) Length = 599 Score = 30.4 bits (67), Expect = 4.2 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 6/133 (4%) Frame = +2 Query: 77 GPSATMAA------EGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAE 238 GP+AT+ E E++ + + G G E E EE G+E G+E E E Sbjct: 392 GPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEE--EEVE 449 Query: 239 ESADREGNGDDARKEDSGCKXXXXXXXXXXXXXXXXAVATAALQEEMRVLLASVPEGAGA 418 E D + + ++ E+S + + QEE + EG Sbjct: 450 EEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGED 509 Query: 419 SFTAMQLQELEQQ 457 S + + ++ E++ Sbjct: 510 SDSDSEEEDDEEE 522
>CCD47_RAT (Q5U2X6) Coiled-coil domain-containing protein 47 precursor| Length = 483 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = +2 Query: 98 AEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDDAR 277 AE ED + DSV + V NT + +EA ++ GQ+ GQE G+ E++ +EG+ + Sbjct: 40 AEFEDVVE-DSVTESPQRVINTEDDEDEATVELEGQDEGQE--GDFEDADTQEGDTESEP 96 Query: 278 KED 286 +D Sbjct: 97 YDD 99
>MDN1_HUMAN (Q9NU22) Midasin (MIDAS-containing protein)| Length = 5596 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/61 (32%), Positives = 29/61 (47%) Frame = +2 Query: 77 GPSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADRE 256 GPS AEGE++ DT + G ++ E +EE Q+ V E ++ AD E Sbjct: 4944 GPSEDDKAEGEEEMDTGADDQDGDAAQHPEEHSEEQ----------QQSVEEKDKEADEE 4993 Query: 257 G 259 G Sbjct: 4994 G 4994
>FOXD2_MOUSE (O35392) Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2)| (MF-2) Length = 492 Score = 30.0 bits (66), Expect = 5.6 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = +2 Query: 59 CRLLLRGPSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAV--GQEPGQELVGE 232 C + ++ AA E D D VGG GG E T + A + G EP E E Sbjct: 6 CCCEIMSSESSPAALSEPDADIDVVGGGSGGGELTARSGPRAPRDVLPHGHEPPPE-EAE 64 Query: 233 AEESADREGNG 265 A+ + D E +G Sbjct: 65 ADVAEDEEESG 75
>SYI_HALMA (Q5UZ84) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1074 Score = 30.0 bits (66), Expect = 5.6 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = +2 Query: 92 MAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDD 271 + + E DT+ + A VE+ L+A + V + G+E+VG A E E D Sbjct: 244 VGVDAEKDGDTERLYLAEACVEDVLKAGRYDDYEVVEELSGEEMVGWAYEHPLAEEVPDH 303 Query: 272 ARKEDSG 292 A+ E SG Sbjct: 304 AQGEGSG 310
>CTPB_MYCTU (Q10877) Cation-transporting P-type ATPase B (EC 3.6.3.-)| Length = 752 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +2 Query: 83 SATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPG 214 + TMA G + D + V G VE+ E A A + A +PG Sbjct: 460 TVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIVAASPDPG 503
>CTPB_MYCBO (P59947) Cation-transporting P-type ATPase B (EC 3.6.3.-)| Length = 752 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +2 Query: 83 SATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPG 214 + TMA G + D + V G VE+ E A A + A +PG Sbjct: 460 TVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIVAASPDPG 503
>OST6_HUMAN (Q96QI5) Heparan sulfate glucosamine 3-O-sulfotransferase 6 (EC| 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 6) (Heparan sulfate 3-O-sulfotransferase 6) (h3-OST-6) Length = 342 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/62 (30%), Positives = 27/62 (43%) Frame = -1 Query: 213 PGSCPTACRIASSAASRVFSTPPPAPPTESVSFLSSPSAAMVAEGPRKRRRQKGIFGIGS 34 PG CP A R + A P P+ P+ SV +P + + R+R Q I G+ Sbjct: 48 PGRCPPAARAPAPA-------PAPSEPSSSVHRPGAPGLPLASGPGRRRFPQALIVGVKK 100 Query: 33 EG 28 G Sbjct: 101 GG 102
>NDF2_HUMAN (Q15784) Neurogenic differentiation factor 2 (NeuroD2)| (NeuroD-related factor) (NDRF) Length = 382 Score = 30.0 bits (66), Expect = 5.6 Identities = 22/65 (33%), Positives = 27/65 (41%) Frame = +2 Query: 17 PFPSPSDPIPKIPFCRLLLRGPSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQA 196 P P P P P + LRG T A E K + G GG E E EE + +A Sbjct: 42 PAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEE-----GELGGEEEEEEEEEEGLDEA 96 Query: 197 VGQEP 211 G+ P Sbjct: 97 EGERP 101
>MRC2_RAT (Q4TU93) Macrophage mannose receptor 2 precursor (Endocytic receptor| 180) (CD280 antigen) Length = 1480 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = +2 Query: 23 PSPSDPIPKIPFCRLLLRGPSATMAAEGEDKNDTDSVGG--AGGGVENTLEAAEEAILQA 196 PSP+ K C ++L PSA +D++ T+ G G + +L + A L A Sbjct: 1065 PSPAPSGTKPTSCAVILHSPSAHFTGRWDDRSCTEETHGFICQKGTDPSLSPSPAAALPA 1124 Query: 197 VGQE 208 G E Sbjct: 1125 PGTE 1128
>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)| Length = 889 Score = 29.6 bits (65), Expect = 7.2 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = +2 Query: 92 MAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDD 271 + + ED + S G E A++ + Q P Q GE E SAD+E D+ Sbjct: 499 LPVQAEDAMEDGSPEENGPSKEEGSGASQAENDAPMDQSPVQGGAGEGEASADKEEQADN 558 Query: 272 ARKEDS 289 KE S Sbjct: 559 GSKETS 564
>UL31_HCMVA (P16848) Hypothetical protein UL31 precursor| Length = 595 Score = 29.6 bits (65), Expect = 7.2 Identities = 26/85 (30%), Positives = 31/85 (36%) Frame = +2 Query: 23 PSPSDPIPKIPFCRLLLRGPSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVG 202 P PS P+P + F LLL PS AA T VG E E + A Sbjct: 18 PPPSSPLPLVSFTELLLPPPSVAAAAVA--ATATSEVG----------EKTAEQEVAAAD 65 Query: 203 QEPGQELVGEAEESADREGNGDDAR 277 E G E +RE G + R Sbjct: 66 PETGN------ERRENRENEGGETR 84
>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 636 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -3 Query: 169 FQGVLDTATGPPNGISIILVLPLRRHGSGRASQEKTTKRYLWD 41 FQGV D+ TGP N + I VL R G+ + E T +Y D Sbjct: 18 FQGVSDSCTGPVNAL-IRSVLLQERGGNNSFTHEALTLKYKLD 59
>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -3 Query: 169 FQGVLDTATGPPNGISIILVLPLRRHGSGRASQEKTTKRYLWD 41 FQGV D+ TGP N + I VL R G+ + E T +Y D Sbjct: 18 FQGVSDSCTGPVNAL-IRSVLLQERGGNNSFTHEALTLKYKLD 59
>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -3 Query: 169 FQGVLDTATGPPNGISIILVLPLRRHGSGRASQEKTTKRYLWD 41 FQGV D+ TGP N + I VL R G+ + E T +Y D Sbjct: 18 FQGVSDSCTGPVNAL-IRSVLLQERGGNNSFTHEALTLKYKLD 59
>UL47_VZVD (P09263) Alpha trans-inducing factor 91.8 kDa protein| Length = 819 Score = 29.6 bits (65), Expect = 7.2 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +2 Query: 95 AAEGEDKNDT-DSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDD 271 A EGE + D D G A G EA E+AI + G+ GEAEE EG ++ Sbjct: 141 AEEGEAEEDAIDDEGEAEEG-----EAEEDAI-----DDEGEAEEGEAEEGEAEEGEAEE 190 Query: 272 ARKEDSG 292 +D G Sbjct: 191 DAIDDEG 197
>TALA_DICDI (P54633) Filopodin (Talin homolog)| Length = 2492 Score = 29.6 bits (65), Expect = 7.2 Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 15/125 (12%) Frame = +2 Query: 137 GAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEE---------SADREGNGDDARKEDS 289 G G +EAA ++ A G+ +EL+ A SA R +GDD + + + Sbjct: 2355 GVGAATHRLVEAAMKS---ATGKAEEEELIATARSVAAATALLVSASRAKSGDDYQSQAA 2411 Query: 290 GCKXXXXXXXXXXXXXXXXAVATAAL------QEEMRVLLASVPEGAGASFTAMQLQELE 451 A A AA QEE E +FT +++ELE Sbjct: 2412 HSHLSTAARQVASATSDLVAAAKAATIFDEQQQEE---------EQEQFNFTGSKVKELE 2462 Query: 452 QQSRV 466 QQ ++ Sbjct: 2463 QQMKI 2467
>RPOD_CAUCR (P52324) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 652 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 12/72 (16%) Frame = +2 Query: 77 GPSATMAAEGEDKND-TDSVGGAGGGVENTLEAAEEAILQAVGQE-----------PGQE 220 G + AEGED++D D G +E L AIL A+ E G Sbjct: 212 GEAKAEGAEGEDEDDFDDGAGPTVSAMEGELREGVMAILDAIASEFEAFRKLQDKLVGSR 271 Query: 221 LVGEAEESADRE 256 L GE ADR+ Sbjct: 272 LKGEDLSDADRK 283
>BDLF2_EBV (P03225) Protein BDLF2| Length = 420 Score = 29.6 bits (65), Expect = 7.2 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 2 RHEGRPFPSP-SDPIPKIPFCRLLLRGPSATMAAEGEDKNDTDSVGGAGG 148 R +GR F P S P PFC++ P+ + N+TDS GG GG Sbjct: 225 RGKGRDFGVPLSYGCPTNPFCKVYTLIPAVVINNVTYYPNNTDSHGGHGG 274
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -1 Query: 204 CPTACRIASSA----ASRVFSTPPPAPPTESVSFLSSPSAAMVAEG 79 CP ACR S+ A R+ PP PP FL S A + +G Sbjct: 31 CPAACRCYSATVECGALRLRVVPPGIPPGTQTLFLQDNSIAHLEQG 76
>NCKX1_BOVIN (Q28139) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1216 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +2 Query: 101 EGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADR 253 +GE K+D + V G GGG E EE + +E +E E EE ++ Sbjct: 962 QGEAKDDEEGVDGEGGGDGGDSEDEEEEDEEEEDEEEEEEEEEEEEEENEQ 1012
>UVRA_PSELE (P52087) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) (Fragment) Length = 689 Score = 29.3 bits (64), Expect = 9.5 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 12/79 (15%) Frame = +2 Query: 56 FCRLLLRGPSATMAAEGEDKNDTD------------SVGGAGGGVENTLEAAEEAILQAV 199 F + R P + G +N+ D SV G G +++L + +++ V Sbjct: 499 FAKQPSRSPQGWLQVAGVTRNNLDNLTAAFPLGVLTSVSGVSGSGKSSL--VSQVLVELV 556 Query: 200 GQEPGQELVGEAEESADRE 256 + GQELV EAE+ E Sbjct: 557 SKALGQELVAEAEQGESIE 575
>EMSY_HUMAN (Q7Z589) Protein EMSY| Length = 1322 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Frame = -1 Query: 207 SCPTACRIASSAASRVFSTPPPAP-------PTESVSFLSSPSAAMVAEGPRKRRR 61 S PT+ + S + + V S P +P P+ S ++ S S + E PRKRRR Sbjct: 151 STPTSTPVPSGSIATVKSPRPASPASNVVVLPSGSTVYVKSVSCSDEDEKPRKRRR 206
>OXAA_RHOBA (Q7UFZ2) Inner membrane protein oxaA| Length = 827 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = +2 Query: 164 LEAAEEAILQAVGQ--EPGQELVGEAEESADREGNGDDARKE 283 L E+AI + G+ EP ++LV + + S EG G++A ++ Sbjct: 35 LPPEEDAIAEVDGETVEPAEDLVADTDASEPGEGEGEEANED 76
>ORAI1_HUMAN (Q96D31) Protein orai-1| Length = 301 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/47 (36%), Positives = 20/47 (42%) Frame = -1 Query: 150 PPPAPPTESVSFLSSPSAAMVAEGPRKRRRQKGIFGIGSEGEGKGRP 10 P PAPP S PS G R+ RR+ G +GE G P Sbjct: 3 PEPAPPPSRSSPELPPSGGSTTSGSRRSRRRSG------DGEPPGAP 43
>NOP14_SCHPO (O43051) Probable nucleolar complex protein 14| Length = 827 Score = 29.3 bits (64), Expect = 9.5 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +2 Query: 83 SATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREG- 259 SA+ A ED+ TD+V G G G+E E I + EAEES D E Sbjct: 325 SASEAGSIEDEQATDNVFGFGKGLEQENEEEWNGINE------------EAEESEDEESV 372 Query: 260 NGDDARKEDSGCK 298 N D + +D K Sbjct: 373 NSDTSFVDDEQLK 385
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 29.3 bits (64), Expect = 9.5 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%) Frame = +2 Query: 92 MAAEGEDKNDTDS--VGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEES------- 244 +A GED D D+ +GGAG GV + L+ + L+ +VG +++ Sbjct: 239 VAEHGEDGLDLDASAIGGAGAGVRHVLKVSMPDTLE------DYYMVGRYDDADDTFTVP 292 Query: 245 -ADREGNGDDARK 280 D E +GDD R+ Sbjct: 293 PEDLEAHGDDYRR 305
>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 29.3 bits (64), Expect = 9.5 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 14/118 (11%) Frame = -3 Query: 358 SCYRFLWILDQDMVLYQDQIFTPAIFLPSVVAVPLSICTLLRLAHQFLTGF--------- 206 S R + I+ + V D + A+ PS + V ++ ++ A GF Sbjct: 319 SLLRAIMIIKKSKVSLNDNFKSRAVVKPSELDVNMNHENVVAFADWSRLGFDEVDFGWGN 378 Query: 205 ----LPYRLQNRL-LRRFQGVLDTATGPPNGISIILVLPLRRHGSGRASQEKTTKRYL 47 P + Q+ L ++ + L + P+GI I++ LPL + S + E K+Y+ Sbjct: 379 AVSVSPVQQQSALAMQNYFLFLKPSKNKPDGIKILMFLPLSKMKSFKIEMEAMMKKYV 436
>CENPB_MOUSE (P27790) Major centromere autoantigen B (Centromere protein B)| (CENP-B) Length = 599 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/68 (27%), Positives = 32/68 (47%) Frame = +2 Query: 83 SATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGN 262 + + +EGE++ + + E E EE + G+E G E E EE + EG Sbjct: 398 TTSFKSEGEEEEEEEEEEEEEEEEEGEGEEEEEE--EEEGEEEGGEGEEEGEEEVEEEGE 455 Query: 263 GDDARKED 286 DD+ +E+ Sbjct: 456 VDDSDEEE 463
>BFR2_GIBZE (Q4I327) Protein BFR2| Length = 538 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/69 (24%), Positives = 34/69 (49%) Frame = +2 Query: 80 PSATMAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREG 259 P + A + + +D+ G GG ++ E ++ + V E + E++E+ D EG Sbjct: 147 PLSKRAKAADYMSSSDNEGAELGGSDSEDEEMDDGLDALVDGEGDSD--DESDENDDEEG 204 Query: 260 NGDDARKED 286 +GDD ++ Sbjct: 205 SGDDEEDDE 213
>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)| Length = 886 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = +2 Query: 92 MAAEGEDKNDTDSVGGAGGGVENTLEAAEEAILQAVGQEPGQELVGEAEESADREGNGDD 271 + A+ ED + S G E A++ + Q P + GE E SAD+E ++ Sbjct: 499 LPAQAEDAMEDSSPEENGPSKEEGSGASQSENDAPMDQSPVEGGAGEGEASADKEEQAEN 558 Query: 272 ARKEDS 289 KE S Sbjct: 559 GAKETS 564 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,263,339 Number of Sequences: 219361 Number of extensions: 1867764 Number of successful extensions: 9090 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 8073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8992 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
