ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3m01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
2gb|AY107970.1| Zea mays PCO085337 mRNA sequence 238 2e-59
3tpg|BK004880.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-gr... 192 9e-46
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 192 9e-46
5dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic D... 192 9e-46
6ref|NG_001600.1| Rattus norvegicus metallothionein 1, pseudogene... 44 0.53
7gb|M11796.1|RATMT1PA Rat metallothionein-1 pseudogene a (MT-1-ps... 44 0.53
8ref|XM_476456.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
9dbj|AK075760.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 2.1
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
11dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
12dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
13dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
14dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
15dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
16dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
17emb|AJ865375.1| Xenopus laevis mRNA for Exportin 6 (xpo6 gene) 42 2.1
18gb|BC084952.1| Xenopus laevis hypothetical LOC495496, mRNA (cDNA... 42 2.1
19gb|AY329623.1| Mus musculus cellular nucleic acid binding protei... 40 8.3
20gb|AY329622.1| Homo sapiens zinc finger protein 9 (ZNF9) gene, c... 40 8.3
21gb|AY456695.1| Rattus norvegicus SA protein (Sah) gene, complete... 40 8.3
22gb|AY455861.1| Rattus norvegicus SAH (Sah) gene, complete cds 40 8.3
23ref|XM_852656.1| PREDICTED: Canis familiaris similar to cellular... 40 8.3
24ref|XM_852611.1| PREDICTED: Canis familiaris similar to cellular... 40 8.3
25ref|XM_843913.1| PREDICTED: Canis familiaris similar to cellular... 40 8.3
26ref|XM_807593.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.3
27ref|XM_504593.1| Yarrowia lipolytica CLIB122, YALI0E30525g predi... 40 8.3
28emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chr... 40 8.3
29emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 8.3
30gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, co... 40 8.3
31gb|AC087457.5| Homo sapiens chromosome 15, clone RP11-814P5, com... 40 8.3
32gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer... 40 8.3
33gb|AY176064.1| Mus musculus cellular nucleic acid binding protei... 40 8.3
34gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Canc... 40 8.3
35gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D... 40 8.3
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
38dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
39gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cance... 40 8.3
40gb|AC024085.5|AC024085 Human Chromosome 7 clone RP11-190G13, com... 40 8.3
41dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
42dbj|AK120565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
43emb|BX897731.7| Zebrafish DNA sequence from clone DKEY-146J3 in ... 40 8.3
44gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Can... 40 8.3
45gb|AC008734.7| Homo sapiens chromosome 19 clone CTD-2529P6, comp... 40 8.3
46emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 8.3 
>dbj|AK066400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062O07, full
           insert sequence
          Length = 1416

 Score =  248 bits (125), Expect = 2e-62
 Identities = 267/313 (85%), Gaps = 1/313 (0%)
 Strand = Plus / Plus

                                                                       
Query: 292 gtgtaaagatctggtcctggtagaggaccatgtcctggtcgaggatccagaggaagcggt 351
           |||||| |||||||| || || ||||||   ||||  ||||||||||| |||||||| | 
Sbjct: 297 gtgtaaggatctggtgctcgtcgaggacgccgtccccgtcgaggatccggaggaagccgc 356

                                                                       
Query: 352 agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 411
           ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 357 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 416

                                                                       
Query: 412 tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 471
           ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 417 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 476

                                                                       
Query: 472 gtatatggctgccccgtgtgcccgtacctacccatctcgtcttccccatctggaagagtg 531
           |||||||||||||| ||||||| || ||||| |||||||||||||| || ||||||||||
Sbjct: 477 gtatatggctgccc-gtgtgcctgtgcctactcatctcgtcttcccaatatggaagagtg 535

                                                                       
Query: 532 ttaccggtgcatcctctgaaggcgcccagaattaccctacactgatgggattggcaactc 591
           |||| |||||||| || |||||||||||||| ||||| ||| ||||||| |||||||| |
Sbjct: 536 ttactggtgcatcttccgaaggcgcccagaagtacccgacattgatggggttggcaacac 595

                        
Query: 592 tctgcttggactt 604
           |||||||||||||
Sbjct: 596 tctgcttggactt 608



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 91  catggcggcggagggggaggacaagaa 117
           |||||||||||||||||||| ||||||
Sbjct: 84  catggcggcggagggggaggccaagaa 110
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>gb|AY107970.1| Zea mays PCO085337 mRNA sequence
          Length = 729

 Score =  238 bits (120), Expect = 2e-59
 Identities = 244/284 (85%), Gaps = 1/284 (0%)
 Strand = Plus / Plus

                                                                       
Query: 329 gtcgaggatccagaggaagcggtagcaactgcagcacttcaggaagaaatgagagtgctt 388
           ||||||||||| |||||||| | |||||| |||||||| ||||||||||||| || ||||
Sbjct: 394 gtcgaggatccggaggaagctgcagcaaccgcagcactccaggaagaaatgaaagcgctt 453

                                                                       
Query: 389 ttggcgtctgtccctgaaggtgctggggcatcatttactgcgatgcagctgcaggagcta 448
            |||| ||  ||||||| |||||||| ||| |||| || || |||||||| |||||||||
Sbjct: 454 gtggcatcgatccctgatggtgctggagcagcattcacagccatgcagcttcaggagcta 513

                                                                       
Query: 449 gagcagcaatctcgggtataccagtatatggctgccccgtgtgcccgtacctacccatct 508
           |||||||| || ||||| |||||||| ||||||| |||| || || || ||||| || ||
Sbjct: 514 gagcagcagtcccgggtgtaccagtacatggctg-cccgagtacctgtgcctactcacct 572

                                                                       
Query: 509 cgtcttccccatctggaagagtgttaccggtgcatcctctgaaggcgcccagaattaccc 568
           |||||||||  | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 573 cgtcttcccggtatggaagagtgtgaccggtgcatcctctgaaggcgcccagaagtaccc 632

                                                       
Query: 569 tacactgatgggattggcaactctctgcttggacttcgggaaga 612
           |||  ||||||| || ||||| |||||||||||||| |||||||
Sbjct: 633 tactttgatgggcttagcaacgctctgcttggactttgggaaga 676



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 89  accatggcggcggagggggaggacaagaa 117
           |||||| ||||||||||||||| ||||||
Sbjct: 145 accatgacggcggagggggaggccaagaa 173
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>tpg|BK004880.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group)
            growth-regulating factor 11 (GRF11) gene, complete cds
          Length = 6000

 Score =  192 bits (97), Expect = 9e-46
 Identities = 188/217 (86%), Gaps = 1/217 (0%)
 Strand = Plus / Plus

                                                                        
Query: 352  agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 411
            ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 2957 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 3016

                                                                        
Query: 412  tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 471
            ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 3017 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 3076

                                                                        
Query: 472  gtatatggctgccccgtgtgcccgtacctacccatctcgtcttccccatctggaagagtg 531
            |||||||||||||| ||||||| || ||||| |||||||||||||| || ||||||||||
Sbjct: 3077 gtatatggctgccc-gtgtgcctgtgcctactcatctcgtcttcccaatatggaagagtg 3135

                                                 
Query: 532  ttaccggtgcatcctctgaaggcgcccagaattaccc 568
            |||| |||||||| ||||||||||||||||| |||||
Sbjct: 3136 ttactggtgcatcttctgaaggcgcccagaagtaccc 3172



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 574  tgatgggattggcaactctctgcttggactt 604
            ||||||| |||||||| ||||||||||||||
Sbjct: 3503 tgatggggttggcaacactctgcttggactt 3533



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 91   catggcggcggagggggaggacaagaa 117
            |||||||||||||||||||| ||||||
Sbjct: 1843 catggcggcggagggggaggccaagaa 1869
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  192 bits (97), Expect = 9e-46
 Identities = 188/217 (86%), Gaps = 1/217 (0%)
 Strand = Plus / Plus

                                                                            
Query: 352      agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 411
                ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 16570314 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 16570373

                                                                            
Query: 412      tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 471
                ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 16570374 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 16570433

                                                                            
Query: 472      gtatatggctgccccgtgtgcccgtacctacccatctcgtcttccccatctggaagagtg 531
                |||||||||||||| ||||||| || ||||| |||||||||||||| || ||||||||||
Sbjct: 16570434 gtatatggctgccc-gtgtgcctgtgcctactcatctcgtcttcccaatatggaagagtg 16570492

                                                     
Query: 532      ttaccggtgcatcctctgaaggcgcccagaattaccc 568
                |||| |||||||| ||||||||||||||||| |||||
Sbjct: 16570493 ttactggtgcatcttctgaaggcgcccagaagtaccc 16570529



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 574      tgatgggattggcaactctctgcttggactt 604
                ||||||| |||||||| ||||||||||||||
Sbjct: 16570860 tgatggggttggcaacactctgcttggactt 16570890



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 91       catggcggcggagggggaggacaagaa 117
                |||||||||||||||||||| ||||||
Sbjct: 16569200 catggcggcggagggggaggccaagaa 16569226



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 90      ccatggcggcggagggggagg 110
               |||||||||||||||||||||
Sbjct: 1315364 ccatggcggcggagggggagg 1315384
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>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0003B09
          Length = 161813

 Score =  192 bits (97), Expect = 9e-46
 Identities = 188/217 (86%), Gaps = 1/217 (0%)
 Strand = Plus / Plus

                                                                         
Query: 352   agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 411
             ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 60934 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 60993

                                                                         
Query: 412   tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 471
             ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 60994 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 61053

                                                                         
Query: 472   gtatatggctgccccgtgtgcccgtacctacccatctcgtcttccccatctggaagagtg 531
             |||||||||||||| ||||||| || ||||| |||||||||||||| || ||||||||||
Sbjct: 61054 gtatatggctgccc-gtgtgcctgtgcctactcatctcgtcttcccaatatggaagagtg 61112

                                                  
Query: 532   ttaccggtgcatcctctgaaggcgcccagaattaccc 568
             |||| |||||||| ||||||||||||||||| |||||
Sbjct: 61113 ttactggtgcatcttctgaaggcgcccagaagtaccc 61149



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 574   tgatgggattggcaactctctgcttggactt 604
             ||||||| |||||||| ||||||||||||||
Sbjct: 61480 tgatggggttggcaacactctgcttggactt 61510



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 91    catggcggcggagggggaggacaagaa 117
             |||||||||||||||||||| ||||||
Sbjct: 59820 catggcggcggagggggaggccaagaa 59846
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>ref|NG_001600.1| Rattus norvegicus metallothionein 1, pseudogene 1 (Mt1-ps1) on
           chromosome 1
          Length = 575

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 432 tgcagctgcaggagctagagca 453
           ||||||||||||||||||||||
Sbjct: 230 tgcagctgcaggagctagagca 209
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>gb|M11796.1|RATMT1PA Rat metallothionein-1 pseudogene a (MT-1-pseudo-a)
          Length = 2314

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 432 tgcagctgcaggagctagagca 453
           ||||||||||||||||||||||
Sbjct: 386 tgcagctgcaggagctagagca 365
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>ref|XM_476456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1054

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 90  ccatggcggcggagggggagg 110
           |||||||||||||||||||||
Sbjct: 83  ccatggcggcggagggggagg 63
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>dbj|AK075760.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700030I23 product:cellular nucleic acid
           binding protein, full insert sequence
          Length = 1673

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 223 ggtgggcgaggcggaggagag 243
           |||||||||||||||||||||
Sbjct: 1   ggtgggcgaggcggaggagag 21
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 92       atggcggcggagggggaggac 112
                |||||||||||||||||||||
Sbjct: 23798998 atggcggcggagggggaggac 23799018
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>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 92     atggcggcggagggggaggac 112
              |||||||||||||||||||||
Sbjct: 147074 atggcggcggagggggaggac 147094
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    atggcggcggagggggaggac 112
             |||||||||||||||||||||
Sbjct: 38663 atggcggcggagggggaggac 38683
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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    ccatggcggcggagggggagg 110
             |||||||||||||||||||||
Sbjct: 80199 ccatggcggcggagggggagg 80219
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>dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159A01, full
           insert sequence
          Length = 1054

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 90  ccatggcggcggagggggagg 110
           |||||||||||||||||||||
Sbjct: 83  ccatggcggcggagggggagg 63
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>dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G13, full
           insert sequence
          Length = 1556

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  atggcggcggagggggaggac 112
           |||||||||||||||||||||
Sbjct: 106 atggcggcggagggggaggac 126
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>dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C12, full
           insert sequence
          Length = 1695

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  atggcggcggagggggaggac 112
           |||||||||||||||||||||
Sbjct: 109 atggcggcggagggggaggac 129
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>emb|AJ865375.1| Xenopus laevis mRNA for Exportin 6 (xpo6 gene)
          Length = 3408

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 184  gattctgcaggcggtagggcaagaacccggtca 216
            ||||||||||| ||||| ||||||||| |||||
Sbjct: 2712 gattctgcaggtggtagtgcaagaacctggtca 2744
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>gb|BC084952.1| Xenopus laevis hypothetical LOC495496, mRNA (cDNA clone MGC:83326
            IMAGE:6864379), complete cds
          Length = 4048

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 184  gattctgcaggcggtagggcaagaacccggtca 216
            ||||||||||| ||||| ||||||||| |||||
Sbjct: 2746 gattctgcaggtggtagtgcaagaacctggtca 2778
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>gb|AY329623.1| Mus musculus cellular nucleic acid binding protein (Cnbp) gene,
           complete cds
          Length = 8035

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 gtgggcgaggcggaggagag 243
           ||||||||||||||||||||
Sbjct: 30  gtgggcgaggcggaggagag 49
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>gb|AY329622.1| Homo sapiens zinc finger protein 9 (ZNF9) gene, complete cds
          Length = 14461

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 gtgggcgaggcggaggagag 243
           ||||||||||||||||||||
Sbjct: 97  gtgggcgaggcggaggagag 116
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>gb|AY456695.1| Rattus norvegicus SA protein (Sah) gene, complete cds
          Length = 26997

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   cactgatgggattggcaact 590
             ||||||||||||||||||||
Sbjct: 14362 cactgatgggattggcaact 14381
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>gb|AY455861.1| Rattus norvegicus SAH (Sah) gene, complete cds
          Length = 32300

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   cactgatgggattggcaact 590
             ||||||||||||||||||||
Sbjct: 18408 cactgatgggattggcaact 18427
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>ref|XM_852656.1| PREDICTED: Canis familiaris similar to cellular nucleic acid
           binding protein 1, transcript variant 6 (LOC476518),
           mRNA
          Length = 1612

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 gtgggcgaggcggaggagag 243
           ||||||||||||||||||||
Sbjct: 5   gtgggcgaggcggaggagag 24
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>ref|XM_852611.1| PREDICTED: Canis familiaris similar to cellular nucleic acid
           binding protein 1, transcript variant 5 (LOC476518),
           mRNA
          Length = 1671

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 gtgggcgaggcggaggagag 243
           ||||||||||||||||||||
Sbjct: 10  gtgggcgaggcggaggagag 29
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>ref|XM_843913.1| PREDICTED: Canis familiaris similar to cellular nucleic acid
           binding protein 1, transcript variant 2 (LOC476518),
           mRNA
          Length = 1696

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 gtgggcgaggcggaggagag 243
           ||||||||||||||||||||
Sbjct: 5   gtgggcgaggcggaggagag 24
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>ref|XM_807593.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510535.20) partial mRNA
          Length = 8019

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  ggtgggcgaggcggaggaga 242
            ||||||||||||||||||||
Sbjct: 2514 ggtgggcgaggcggaggaga 2533
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>ref|XM_504593.1| Yarrowia lipolytica CLIB122, YALI0E30525g predicted mRNA
          Length = 1449

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ggtcgaggatccagaggaag 347
           ||||||||||||||||||||
Sbjct: 131 ggtcgaggatccagaggaag 112
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>emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chromosome 9 Contains the
             3' end of the PRSS3 gene for serine protease 3
             (mesotrypsin) (MTG, TRY3, TRY4, PRSS4), the 5' end of a
             novel gene, two novel pseudogenes, a DC2 protein
             pseudogene, the UBC3B gene for ubiquitin-conjugating
             enzyme, two novel genes, the 3' end of a novel gene
             (KIAA1491, FLJ22435, FLJ21704, FLJ22148, FLJ33002) and a
             CpG island, complete sequence
          Length = 193280

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   cacttcaggaagaaatgaga 382
             ||||||||||||||||||||
Sbjct: 50180 cacttcaggaagaaatgaga 50161
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 223     ggtgggcgaggcggaggaga 242
               ||||||||||||||||||||
Sbjct: 1756512 ggtgggcgaggcggaggaga 1756531



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     ggcggaggagagtgcagatc 251
               ||||||||||||||||||||
Sbjct: 1638595 ggcggaggagagtgcagatc 1638576
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>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence
          Length = 186105

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    atctcgggtataccagtata 476
              ||||||||||||||||||||
Sbjct: 126046 atctcgggtataccagtata 126027
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>gb|AC087457.5| Homo sapiens chromosome 15, clone RP11-814P5, complete sequence
          Length = 141899

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gtgggcgaggcggaggagag 243
              ||||||||||||||||||||
Sbjct: 107217 gtgggcgaggcggaggagag 107236
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>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 240079

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gtgggcgaggcggaggagag 243
             ||||||||||||||||||||
Sbjct: 12380 gtgggcgaggcggaggagag 12399
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>gb|AY176064.1| Mus musculus cellular nucleic acid binding protein (Cnbp) gene,
            complete cds
          Length = 12191

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  gtgggcgaggcggaggagag 243
            ||||||||||||||||||||
Sbjct: 3319 gtgggcgaggcggaggagag 3338
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>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203418

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gtgggcgaggcggaggagag 243
             ||||||||||||||||||||
Sbjct: 32441 gtgggcgaggcggaggagag 32422
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>gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D22, complete sequence
          Length = 183353

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    ctggtcctggtagaggacca 321
              ||||||||||||||||||||
Sbjct: 154959 ctggtcctggtagaggacca 154978
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    gcggcggaggaggcgattctgcag 193
              ||||| ||||||||||||||||||
Sbjct: 195487 gcggcagaggaggcgattctgcag 195464
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     ggcggaggagagtgcagatc 251
               ||||||||||||||||||||
Sbjct: 3656556 ggcggaggagagtgcagatc 3656537
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0583G08
          Length = 135295

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   ggcggaggagagtgcagatc 251
             ||||||||||||||||||||
Sbjct: 65036 ggcggaggagagtgcagatc 65017
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>gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 71577

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  gtgggcgaggcggaggagag 243
            ||||||||||||||||||||
Sbjct: 9824 gtgggcgaggcggaggagag 9805
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>gb|AC024085.5|AC024085 Human Chromosome 7 clone RP11-190G13, complete sequence
          Length = 168405

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  ctggtcctggtagaggacca 321
            ||||||||||||||||||||
Sbjct: 4665 ctggtcctggtagaggacca 4684
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>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0066B16
          Length = 190143

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   gcggcggaggaggcgattctgcag 193
             ||||| ||||||||||||||||||
Sbjct: 90985 gcggcagaggaggcgattctgcag 90962
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>dbj|AK120565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133J10, full
           insert sequence
          Length = 3753

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 170 gcggcggaggaggcgattctgcag 193
           ||||| ||||||||||||||||||
Sbjct: 31  gcggcagaggaggcgattctgcag 54
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>emb|BX897731.7| Zebrafish DNA sequence from clone DKEY-146J3 in linkage group 4,
             complete sequence
          Length = 99029

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 430   gatgcagctgcaggagctagagca 453
             ||||| ||||||||||||||||||
Sbjct: 13969 gatgctgctgcaggagctagagca 13946
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>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 230270

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    atctcgggtataccagtata 476
              ||||||||||||||||||||
Sbjct: 183205 atctcgggtataccagtata 183224
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>gb|AC008734.7| Homo sapiens chromosome 19 clone CTD-2529P6, complete sequence
          Length = 183137

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    agcaactgcagcacttcagg 371
              ||||||||||||||||||||
Sbjct: 134873 agcaactgcagcacttcagg 134854
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 328     ggtcgaggatccagaggaag 347
               ||||||||||||||||||||
Sbjct: 3590838 ggtcgaggatccagaggaag 3590819


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,717,239
Number of Sequences: 3902068
Number of extensions: 4717239
Number of successful extensions: 99482
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99040
Number of HSP's gapped (non-prelim): 437
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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