ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3l15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 174 atgtgcccgctgagggtgatactcatcttcctctccgccaccatcgccggcttcttcctc 233 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 617439 atgtgcccgctgagggtgatcctaatcttcctctccgccaccatcgccggattcttcctc 617498 Query: 234 ctccggggcctcaacgccgagccggacct 262 ||||||||||||||||||| || ||||| Sbjct: 617499 atccggggcctcaacgccgatcccgacct 617527 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 372 acaggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgtt 431 |||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| Sbjct: 619027 acaggattctggacgatggtggacatggcaagtgggaaatacctttggcgcactcttgtt 619086 Query: 432 gcaccaccggcaaaatctgaatccgagaaggcccggtga 470 ||||||| |||||| |||||| |||||||||| |||| Sbjct: 619087 tcaccaccaacaaaatgtgaatctgagaaggcccagtga 619125 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 ccgccaccatcgccggcttcttcctcctcc 237 ||||||||||||||| ||||||| |||||| Sbjct: 28096906 ccgccaccatcgccgtcttcttcttcctcc 28096877
>dbj|AK073235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F07, full insert sequence Length = 922 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 174 atgtgcccgctgagggtgatactcatcttcctctccgccaccatcgccggcttcttcctc 233 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 397 atgtgcccgctgagggtgatcctaatcttcctctccgccaccatcgccggattcttcctc 456 Query: 234 ctccggggcctcaacgccgagccggacct 262 ||||||||||||||||||| || ||||| Sbjct: 457 atccggggcctcaacgccgatcccgacct 485 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 372 acaggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgtt 431 |||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| Sbjct: 568 acaggattctggacgatggtggacatggcaagtgggaaatacctttggcgcactcttgtt 627 Query: 432 gcaccaccggcaaaatctgaatccgagaaggcccggtga 470 ||||||| |||||| |||||| |||||||||| |||| Sbjct: 628 tcaccaccaacaaaatgtgaatctgagaaggcccagtga 666
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 174 atgtgcccgctgagggtgatactcatcttcctctccgccaccatcgccggcttcttcctc 233 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 617439 atgtgcccgctgagggtgatcctaatcttcctctccgccaccatcgccggattcttcctc 617498 Query: 234 ctccggggcctcaacgccgagccggacct 262 ||||||||||||||||||| || ||||| Sbjct: 617499 atccggggcctcaacgccgatcccgacct 617527 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 372 acaggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgtt 431 |||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| Sbjct: 619027 acaggattctggacgatggtggacatggcaagtgggaaatacctttggcgcactcttgtt 619086 Query: 432 gcaccaccggcaaaatctgaatccgagaaggcccggtga 470 ||||||| |||||| |||||| |||||||||| |||| Sbjct: 619087 tcaccaccaacaaaatgtgaatctgagaaggcccagtga 619125 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 ccgccaccatcgccggcttcttcctcctcc 237 ||||||||||||||| ||||||| |||||| Sbjct: 28081784 ccgccaccatcgccgtcttcttcttcctcc 28081755
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 174 atgtgcccgctgagggtgatactcatcttcctctccgccaccatcgccggcttcttcctc 233 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 125533 atgtgcccgctgagggtgatcctaatcttcctctccgccaccatcgccggattcttcctc 125474 Query: 234 ctccggggcctcaacgccgagccggacct 262 ||||||||||||||||||| || ||||| Sbjct: 125473 atccggggcctcaacgccgatcccgacct 125445 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 372 acaggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgtt 431 |||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| Sbjct: 123945 acaggattctggacgatggtggacatggcaagtgggaaatacctttggcgcactcttgtt 123886 Query: 432 gcaccaccggcaaaatctgaatccgagaaggcccggtga 470 ||||||| |||||| |||||| |||||||||| |||| Sbjct: 123885 tcaccaccaacaaaatgtgaatctgagaaggcccagtga 123847
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 174 atgtgcccgctgagggtgatactcatcttcctctccgccaccatcgccggcttcttcctc 233 |||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||| Sbjct: 655498 atgtgcccgctgagggtgatcctcatcttcctctccgctactatcgccggattcttcctc 655557 Query: 234 ctccggggcctcaacgccgagccggacct 262 ||||||||||||||||||| || ||||| Sbjct: 655558 atccggggcctcaacgccgatcccgacct 655586 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 372 acaggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgtt 431 |||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| Sbjct: 657057 acaggattctggacgatggtggacatggcaagtgggaaatacctttggcgcactcttgtt 657116 Query: 432 gcaccaccggcaaaatctgaatccgagaagg 462 |||||||| |||||| ||||| ||||||| Sbjct: 657117 tcaccaccgacaaaatgcgaatctgagaagg 657147
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 174 atgtgcccgctgagggtgatactcatcttcctctccgccaccatcgccggcttcttcctc 233 |||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||| Sbjct: 655498 atgtgcccgctgagggtgatcctcatcttcctctccgctactatcgccggattcttcctc 655557 Query: 234 ctccggggcctcaacgccgagccggacct 262 ||||||||||||||||||| || ||||| Sbjct: 655558 atccggggcctcaacgccgatcccgacct 655586 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 372 acaggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgtt 431 |||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| Sbjct: 657057 acaggattctggacgatggtggacatggcaagtgggaaatacctttggcgcactcttgtt 657116 Query: 432 gcaccaccggcaaaatctgaatccgagaagg 462 |||||||| |||||| ||||| ||||||| Sbjct: 657117 tcaccaccgacaaaatgcgaatctgagaagg 657147
>emb|BX571785.1|CNS09SBO Oryza sativa chromosome 12, . Partial sequence from PAC 1 of BAC OSJNBb0027O09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 14570 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 174 atgtgcccgctgagggtgatactcatcttcctctccgccaccatcgccggcttcttcctc 233 |||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||| Sbjct: 8644 atgtgcccgctgagggtgatcctcatcttcctctccgctactatcgccggattcttcctc 8703 Query: 234 ctccggggcctcaacgccgagccggacct 262 ||||||||||||||||||| || ||||| Sbjct: 8704 atccggggcctcaacgccgatcccgacct 8732 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 372 acaggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgtt 431 |||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| Sbjct: 10203 acaggattctggacgatggtggacatggcaagtgggaaatacctttggcgcactcttgtt 10262 Query: 432 gcaccaccggcaaaatctgaatccgagaagg 462 |||||||| |||||| ||||| ||||||| Sbjct: 10263 tcaccaccgacaaaatgcgaatctgagaagg 10293
>gb|AY106014.1| Zea mays PCO120164 mRNA sequence Length = 391 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 373 caggattctggacgatggtggacatggcaagcgggcggtacctttggaggacccttgttg 432 |||| |||||||||||||||||||||||||||||||| ||||| ||| | |||||||||| Sbjct: 341 cagggttctggacgatggtggacatggcaagcgggcgttacctctggcgcacccttgttg 282 Query: 433 caccaccggcaaaatctgaatccgagaaggcccggtgacgaa 474 | | || || || || ||||||||||||||||||||||||| Sbjct: 281 cgcagcccgcgaattcggaatccgagaaggcccggtgacgaa 240
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcccat 75 |||||||||||||||||| |||||||||| Sbjct: 26183 ctcttcctcctcctcctaccccctcccat 26211
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcccat 75 |||||||||||||||||| |||||||||| Sbjct: 28018958 ctcttcctcctcctcctaccccctcccat 28018986 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 gacgacgcagccgccgccgtcgcgggg 296 |||||||| |||||||||||||||||| Sbjct: 27310213 gacgacgccgccgccgccgtcgcgggg 27310187 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 caacctactcttcctcctcctcct 63 |||||| ||||||||||||||||| Sbjct: 31077523 caacctcctcttcctcctcctcct 31077500 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 ccaccaacctactcttcctcctcctcct 63 |||||||||| ||| ||||||||||||| Sbjct: 18604981 ccaccaacctcctcctcctcctcctcct 18605008 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 aggacgacgcagccgccgccgtcg 291 |||||||||| ||||||||||||| Sbjct: 6888833 aggacgacgccgccgccgccgtcg 6888810
>ref|XM_473395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 gacgacgcagccgccgccgtcgcgggg 296 |||||||| |||||||||||||||||| Sbjct: 939 gacgacgccgccgccgccgtcgcgggg 965
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 gacgacgcagccgccgccgtcgcgggg 296 |||||||| |||||||||||||||||| Sbjct: 46141 gacgacgccgccgccgccgtcgcgggg 46115
>gb|AC163161.4| Mus musculus BAC clone RP23-103A23 from chromosome 6, complete sequence Length = 224416 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccctccc 73 ||||||||||||||||||| ||||||| Sbjct: 194383 ctcttcctcctcctcctattccctccc 194357
>gb|AC159300.3| Mus musculus BAC clone RP23-242D23 from chromosome 6, complete sequence Length = 200738 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctccc 73 ||||||||||||||||||| ||||||| Sbjct: 123366 ctcttcctcctcctcctattccctccc 123392
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 206 ctccgccaccatcgccggcttcttcctcctc 236 ||||||| |||||||||||||| |||||||| Sbjct: 10192881 ctccgcctccatcgccggcttcctcctcctc 10192911 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccacgccgcgccgcaccg 98 |||||||||||||||||||| Sbjct: 32399995 cgccacgccgcgccgcaccg 32399976
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 206 ctccgccaccatcgccggcttcttcctcctc 236 ||||||| |||||||||||||| |||||||| Sbjct: 65247 ctccgcctccatcgccggcttcctcctcctc 65277
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 206 ctccgccaccatcgccggcttcttcctcctc 236 ||||||| |||||||||||||| |||||||| Sbjct: 140575 ctccgcctccatcgccggcttcctcctcctc 140605
>gb|AC134827.4| Mus musculus BAC clone RP24-470E5 from 5, complete sequence Length = 193811 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccc 69 ||||||||||||||||||||||| Sbjct: 142324 ctcttcctcctcctcctatcccc 142302
>emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chromosome 2, complete sequence Length = 179832 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctac 47 ||||||||||||||||||||||| Sbjct: 96405 catccatccatccaccaacctac 96427
>ref|XM_482592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1952 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 catcttcctctccgccaccatc 218 |||||||||||||||||||||| Sbjct: 241 catcttcctctccgccaccatc 220
>ref|XM_507240.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016C11.34 mRNA Length = 2061 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 catcttcctctccgccaccatc 218 |||||||||||||||||||||| Sbjct: 335 catcttcctctccgccaccatc 314
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 ccgccaccatcgccggcttcttcctcctcc 237 ||||||||||||||| ||||||| |||||| Sbjct: 56173 ccgccaccatcgccgtcttcttcttcctcc 56144
>gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome 8, complete sequence Length = 252334 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ctcctcctcctatcccctccca 74 |||||||||||||||||||||| Sbjct: 17613 ctcctcctcctatcccctccca 17634
>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence Length = 199679 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcc 72 ||||||||||||||||| |||||||| Sbjct: 55760 ctcttcctcctcctcctctcccctcc 55785
>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence Length = 274518 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ctcctcctcctatcccctccca 74 |||||||||||||||||||||| Sbjct: 39387 ctcctcctcctatcccctccca 39366
>gb|DQ483833.1| Gymnogyps californianus clone 256F microsatellite sequence Length = 1251 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 acctactcttcctcctcctcct 63 |||||||||||||||||||||| Sbjct: 950 acctactcttcctcctcctcct 929
>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence Length = 187246 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ctcctcctcctatcccctccca 74 |||||||||||||||||||||| Sbjct: 48692 ctcctcctcctatcccctccca 48671
>gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosome 9, complete sequence Length = 196150 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccctcc 72 ||||||||||||||||||||| |||| Sbjct: 44182 ctcttcctcctcctcctatccactcc 44157
>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete sequence Length = 158058 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcc 72 ||||||||||||||||||||| |||| Sbjct: 1635 ctcttcctcctcctcctatccactcc 1660
>emb|AL354828.12| Human DNA sequence from clone RP11-274P12 on chromosome 13 Contains a ferritin heavy polypeptide 1 (FTH1) pseudogene and a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 39 (DDX39) (DDXL, MGC8471, MGC8203) pseudogene, complete sequence Length = 168114 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 accaacctactcttcctcctcctcct 63 |||||||| ||||||||||||||||| Sbjct: 69565 accaacctcctcttcctcctcctcct 69590
>emb|CR392363.4| Zebrafish DNA sequence from clone DKEY-57B6 in linkage group 9, complete sequence Length = 236488 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 atccatccatccaccaacctac 47 |||||||||||||||||||||| Sbjct: 219060 atccatccatccaccaacctac 219081
>gb|AC093783.2| Homo sapiens BAC clone RP11-209D20 from 4, complete sequence Length = 121709 Score = 44.1 bits (22), Expect = 0.46 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcctatcccctcc 72 ||||||||||||||||||||| |||||||| Sbjct: 52176 cctactcttcctcctcctcct-tcccctcc 52204
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 catcttcctctccgccaccatc 218 |||||||||||||||||||||| Sbjct: 21307977 catcttcctctccgccaccatc 21307956 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcc 62 |||||||||||||||||||| Sbjct: 4575085 cctactcttcctcctcctcc 4575104
>gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, complete sequence Length = 177266 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcc 72 ||||||||||||||||| |||||||| Sbjct: 64415 ctcttcctcctcctcctctcccctcc 64440
>emb|AL929090.4| Zebrafish DNA sequence from clone CH211-14A14, complete sequence Length = 178077 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 atccatccatccaccaacctac 47 |||||||||||||||||||||| Sbjct: 101209 atccatccatccaccaacctac 101188
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 catcttcctctccgccaccatc 218 |||||||||||||||||||||| Sbjct: 134254 catcttcctctccgccaccatc 134233
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 catcttcctctccgccaccatc 218 |||||||||||||||||||||| Sbjct: 7902 catcttcctctccgccaccatc 7881
>dbj|AK105915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H08, full insert sequence Length = 1951 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 catcttcctctccgccaccatc 218 |||||||||||||||||||||| Sbjct: 240 catcttcctctccgccaccatc 219
>dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A18, full insert sequence Length = 1317 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 208 ccgccaccatcgccggcttcttcctcctcc 237 ||||||||||||||| ||||||| |||||| Sbjct: 100 ccgccaccatcgccgtcttcttcttcctcc 129
>dbj|AK101476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040O12, full insert sequence Length = 2061 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 catcttcctctccgccaccatc 218 |||||||||||||||||||||| Sbjct: 335 catcttcctctccgccaccatc 314
>gb|AC005691.1|AC005691 Homo sapiens chromosome 17, clone hRPK.28_A_22, complete sequence Length = 156821 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcctatcccctcc 72 ||||||||||||| ||||||| |||||||| Sbjct: 98893 cctactcttcctcttcctcctctcccctcc 98922
>dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-c), complete cds, clone:C12024 Length = 1148 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 208 ccgccaccatcgccggcttcttcctcctcc 237 ||||||||||||||| ||||||| |||||| Sbjct: 52 ccgccaccatcgccgtcttcttcttcctcc 81
>gb|AC153490.1| Mus musculus BAC RP23-210M12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 145026 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcc 67 ||||||||||||||||||||| Sbjct: 129738 ctcttcctcctcctcctatcc 129758
>ref|NM_102115.1| Arabidopsis thaliana unknown protein AT1G22680 mRNA, complete cds Length = 558 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcccattctc 79 |||||||||||||||| || |||||| |||||| Sbjct: 96 ctcttcctcctcctccaattccctcctattctc 128
>gb|AC102285.7| Mus musculus chromosome 19, clone RP24-329P13, complete sequence Length = 174894 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 127951 cctactcttcctcctcctcct 127971
>gb|AC129023.4| Mus musculus BAC clone RP23-430E12 from chromosome 18, complete sequence Length = 185832 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 163991 cctactcttcctcctcctcct 163971
>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence Length = 278715 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 cttggttgattagagatgtgc 179 ||||||||||||||||||||| Sbjct: 106597 cttggttgattagagatgtgc 106577
>gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome 17, complete sequence Length = 197143 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 71387 cctactcttcctcctcctcct 71367
>gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, complete sequence Length = 260036 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 22828 cctactcttcctcctcctcct 22808
>gb|AC126944.3| Mus musculus BAC clone RP23-19A4 from chromosome 19, complete sequence Length = 184164 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 89248 catccatccatccacccacctactc 89272
>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence Length = 173054 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 11331 cctactcttcctcctcctcct 11311
>gb|DQ483866.1| Gymnogyps californianus clone 32G microsatellite sequence Length = 501 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 80 cctactcttcctcctcctcct 60
>emb|CT009544.6| Mouse DNA sequence from clone RP23-32E1 on chromosome 13, complete sequence Length = 158218 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcc 67 ||||||||||||||||||||| Sbjct: 144212 ctcttcctcctcctcctatcc 144192
>gb|AC146479.2| Pan troglodytes BAC clone CH251-424F5 from Y, complete sequence Length = 163250 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctactcttcc 53 |||||||||||||||| |||||| ||||| Sbjct: 139108 catccatccatccacctacctacccttcc 139136
>gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome 2, complete sequence Length = 165307 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccctc 71 ||||||||||||||||| ||||||| Sbjct: 109335 ctcttcctcctcctcctttcccctc 109311
>gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, complete sequence Length = 235544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 22480 cctactcttcctcctcctcct 22500
>gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosome 13, complete sequence Length = 177675 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctc 71 ||||||||||||||||| ||||||| Sbjct: 152728 ctcttcctcctcctcctttcccctc 152752
>gb|AC131729.3| Mus musculus BAC clone RP23-125B15 from 5, complete sequence Length = 209715 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 68134 cctactcttcctcctcctcct 68154
>gb|AC146478.2| Pan troglodytes BAC clone CH251-409D17 from Y, complete sequence Length = 149556 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctactcttcc 53 |||||||||||||||| |||||| ||||| Sbjct: 39610 catccatccatccacctacctacccttcc 39638
>gb|AC156388.6| Mus musculus 10 BAC RP24-254P7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174315 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcc 67 ||||||||||||||||||||| Sbjct: 89806 ctcttcctcctcctcctatcc 89826
>gb|AC166066.6| Mus musculus 10 BAC RP24-285H2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173920 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcc 67 ||||||||||||||||||||| Sbjct: 138770 ctcttcctcctcctcctatcc 138790
>gb|DQ132654.1| Arabidopsis thaliana clone 01544 hypothetical protein (At1g22680) mRNA, complete cds Length = 1410 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcccattctc 79 |||||||||||||||| || |||||| |||||| Sbjct: 412 ctcttcctcctcctccaattccctcctattctc 444
>gb|AC157912.4| Mus musculus chromosome 19, clone RP24-241F10, complete sequence Length = 153690 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 148980 cctactcttcctcctcctcct 148960
>emb|AL451044.7| Human DNA sequence from clone RP11-293K19 on chromosome 1 Contains part of the DOCK7 gene for dedicator of cytokinesis 7, complete sequence Length = 127370 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 121090 cctactcttcctcctcctcct 121110
>emb|AL031943.11|HS223B1 Human DNA sequence from clone RP1-223B1 on chromosome 6p24.1-25.3 Contains the 3' end of a putative novel gene, complete sequence Length = 126281 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 76345 catccatccatccacccacctactc 76321
>gb|AC103453.7| Rattus norvegicus 13 BAC CH230-127N19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199669 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 62574 cctactcttcctcctcctcct 62554
>gb|AC151985.2| Mus musculus BAC clone RP23-381C14 from chromosome 5, complete sequence Length = 204862 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 161185 cctactcttcctcctcctcct 161165
>emb|BX294098.11| Zebrafish DNA sequence from clone CH211-254P12 in linkage group 24, complete sequence Length = 152545 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 139454 cctactcttcctcctcctcct 139474
>emb|AL627444.10| Mouse DNA sequence from clone RP23-307A1 on chromosome 11 Contains the 5' end of the Gabrb2 gene for subunit beta 2 gamma-aminobutyric acid (GABA-A) receptor, complete sequence Length = 176814 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 66943 cctactcttcctcctcctcct 66963
>emb|BX908740.5| Zebrafish DNA sequence from clone DKEY-88E10 in linkage group 1, complete sequence Length = 90443 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 85044 cctactcttcctcctcctcct 85064
>gb|AC090163.10| Homo sapiens chromosome 11, clone RP11-706A13, complete sequence Length = 194642 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccctc 71 |||||||||||||||| |||||||| Sbjct: 189616 ctcttcctcctcctcccatcccctc 189592
>gb|AC078960.26| Homo sapiens Xp BAC RP11-692P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 81427 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 59381 catccatccatccacccacctactc 59357
>emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chromosome 4 Contains a novel pseudogene, complete sequence Length = 195873 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 33546 cctactcttcctcctcctcct 33526
>emb|AL805946.5| Mouse DNA sequence from clone RP23-127B1 on chromosome 4 Contains the 3' end of a novel gene, complete sequence Length = 133178 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 13442 cctactcttcctcctcctcct 13462
>emb|BX322537.14| Zebrafish DNA sequence from clone CH211-262H21 in linkage group 23, complete sequence Length = 26459 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 10890 cctactcttcctcctcctcct 10870
>gb|AC103854.2| Homo sapiens chromosome 11, clone RP11-104M24, complete sequence Length = 152529 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccctc 71 |||||||||||||||| |||||||| Sbjct: 110945 ctcttcctcctcctcccatcccctc 110921
>dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, complete sequence Length = 199770 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctactcttcc 53 |||||||||||||||| |||||| ||||| Sbjct: 64309 catccatccatccacctacctacccttcc 64337
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactcttcc 53 |||||||||||||||| |||||| ||||| Sbjct: 17658109 catccatccatccacctacctacccttcc 17658081
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 114800 cctactcttcctcctcctcct 114820
>gb|AC023590.8| Homo sapiens chromosome 8, clone RP11-655M22, complete sequence Length = 175582 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 45 tactcttcctcctcctccta-tcccctcc 72 |||||||||||||||||||| |||||||| Sbjct: 24222 tactcttcctcctcctcctactcccctcc 24194
>gb|AC159018.3| Pan troglodytes BAC clone CH251-533F3 from chromosome unknown, complete sequence Length = 179366 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 45 tactcttcctcctcctccta-tcccctcc 72 |||||||||||||||||||| |||||||| Sbjct: 49025 tactcttcctcctcctcctactcccctcc 48997
>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence Length = 188085 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 126864 cctactcttcctcctcctcct 126884
>gb|AF177767.1|AF177767 Mus musculus toll-like receptor 4 (Tlr4) gene, Tlr4A allele, complete cds Length = 91748 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 82925 cctactcttcctcctcctcct 82945
>gb|AC008571.6| Homo sapiens chromosome 5 clone CTC-550M4, complete sequence Length = 214267 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 60956 catccatccatccacctacctactc 60980
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 ccgccaccatcgccggcttcttcct 232 ||||||||| ||||||||||||||| Sbjct: 509437 ccgccaccaccgccggcttcttcct 509413
>gb|AC155295.2| Mus musculus BAC clone RP24-329L16 from chromosome 13, complete sequence Length = 166534 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcc 67 ||||||||||||||||||||| Sbjct: 18607 ctcttcctcctcctcctatcc 18627
>gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosome 14, complete sequence Length = 150383 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 31803 cctactcttcctcctcctcct 31823
>gb|AC153870.8| Mus musculus 10 BAC RP23-473J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 164663 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 accaacctactcttcctcctcctcc 62 |||||||| |||||||||||||||| Sbjct: 95161 accaacctcctcttcctcctcctcc 95137
>gb|AC006209.25| Homo sapiens X BAC GS1-546D14 (Genome Systems Human Bac Library) complete sequence Length = 141759 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 103788 catccatccatccacctacctactc 103764
>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence Length = 84162 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcccattctc 79 |||||||||||||||| || |||||| |||||| Sbjct: 53327 ctcttcctcctcctccaattccctcctattctc 53359
>gb|AE004535.1| Pseudomonas aeruginosa PAO1, section 96 of 529 of the complete genome Length = 11431 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 gccgagccggacctgttccaggacg 273 ||||||||| ||||||||||||||| Sbjct: 8256 gccgagccgaacctgttccaggacg 8280
>emb|AL844528.13| Mouse DNA sequence from clone RP23-139H14 on chromosome 2, complete sequence Length = 132715 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cttcctcctcctcctatcccctccc 73 ||||||||||||||| ||||||||| Sbjct: 110453 cttcctcctcctcctctcccctccc 110477
>emb|BX682541.5| Mouse DNA sequence from clone RP23-349P20 on chromosome 2, complete sequence Length = 55982 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 47553 cctactcttcctcctcctcct 47573
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 99035 cctactcttcctcctcctcct 99055
>gb|AY924681.1| Arabidopsis thaliana hypothetical protein (At1g22680) gene, complete cds Length = 558 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctcccattctc 79 |||||||||||||||| || |||||| |||||| Sbjct: 96 ctcttcctcctcctccaattccctcctattctc 128
>gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, complete sequence Length = 233171 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 atcaacatccatccatccacc 40 ||||||||||||||||||||| Sbjct: 221563 atcaacatccatccatccacc 221583
>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17, complete sequence Length = 211277 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 63967 cctactcttcctcctcctcct 63987
>emb|AL049836.3|CNS0000H Human chromosome 14 DNA sequence BAC R-1029J19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 207774 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 180330 catccatccatccacctacctactc 180306 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 180438 catccatccatccacccacctact 180415
>emb|AL355032.6|CNS05TC3 Human chromosome 14 DNA sequence BAC R-796G6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203108 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 111584 catccatccatccacctacctactc 111608 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 111464 catccatccatccacccacctact 111487
>emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence Length = 101385 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 19232 cctactcttcctcctcctcct 19252
>gb|AC113008.9| Mus musculus chromosome 6, clone RP23-460E2, complete sequence Length = 229790 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 227191 cctactcttcctcctcctcct 227171
>gb|AC110258.25| Mus musculus chromosome 6, clone RP23-281L18, complete sequence Length = 169146 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 47127 cctactcttcctcctcctcct 47107
>gb|AC157793.6| Mus musculus chromosome 1, clone RP24-175H22, complete sequence Length = 130354 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 atcaacatccatccatccacc 40 ||||||||||||||||||||| Sbjct: 58033 atcaacatccatccatccacc 58013
>gb|AC121256.22| Mus musculus chromosome 1, clone RP24-576N23, complete sequence Length = 182551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 atcaacatccatccatccacc 40 ||||||||||||||||||||| Sbjct: 49562 atcaacatccatccatccacc 49542
>gb|AC154215.1| Mus musculus BAC clone RP24-134E18 from 13, complete sequence Length = 171014 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcc 67 ||||||||||||||||||||| Sbjct: 8060 ctcttcctcctcctcctatcc 8040
>emb|CT009720.16| Mouse DNA sequence from clone RP23-21J17 on chromosome 9, complete sequence Length = 216098 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 25287 cctactcttcctcctcctcct 25307
>gb|AC154344.1| Mus musculus BAC clone RP23-226G16 from 16, complete sequence Length = 171340 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 106294 cctactcttcctcctcctcct 106314
>gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, complete sequence Length = 201730 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctc 71 ||||||||||||||||| ||||||| Sbjct: 30759 ctcttcctcctcctcctttcccctc 30783
>gb|AY866251.1| Macaca mulatta microRNA mir-221 gene, complete sequence Length = 634 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||| |||||||| Sbjct: 154 catccatccatccacccacctactc 178
>emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chromosome 2, complete sequence Length = 181349 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ctcttcctcctcctcctatcccctc 71 ||||||||||||||||| ||||||| Sbjct: 100763 ctcttcctcctcctcctttcccctc 100787
>emb|AL670292.9| Mouse DNA sequence from clone RP23-231H22 on chromosome X, complete sequence Length = 217063 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcct 63 ||||||||||||||||||||| Sbjct: 182733 cctactcttcctcctcctcct 182713
>dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1786D2 Length = 150409 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 45 tactcttcctcctcctccta-tcccctcc 72 |||||||||||||||||||| |||||||| Sbjct: 36658 tactcttcctcctcctcctactcccctcc 36686
>emb|AL583810.5|CNS07EFZ Human chromosome 14 DNA sequence BAC C-3051D23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 94227 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactc 49 |||||||||||||||||||| |||| Sbjct: 54444 catccatccatccaccaacccactc 54420
>gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence Length = 23480 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 tcctcctccggggcctcaacgccg 252 |||||||||||||||||| ||||| Sbjct: 12795 tcctcctccggggcctcaccgccg 12772
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tctcgccacgccgcgccgcaccgc 99 ||||||||||||||||||| |||| Sbjct: 132069 tctcgccacgccgcgccgcgccgc 132046
>ref|XM_635370.1| Dictyostelium discoideum hypothetical protein (DDB0204250), partial mRNA Length = 3240 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ctactcttcctcctcctcct 63 |||||||||||||||||||| Sbjct: 2828 ctactcttcctcctcctcct 2847
>gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome 7, complete sequence Length = 249571 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 caacctactcttcctcctcc 59 |||||||||||||||||||| Sbjct: 124226 caacctactcttcctcctcc 124245
>ref|XM_474818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 aggacgacgcagccgccgccgtcg 291 |||||||||| ||||||||||||| Sbjct: 50 aggacgacgccgccgccgccgtcg 73
>ref|XM_467985.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgccacgccgcgccgcaccg 98 |||||||||||||||||||| Sbjct: 43 cgccacgccgcgccgcaccg 62
>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence Length = 185353 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ctactcttcctcctcctcct 63 |||||||||||||||||||| Sbjct: 165648 ctactcttcctcctcctcct 165629
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cttcctcctcctcctatcccctcc 72 |||||||||| ||||||||||||| Sbjct: 1797429 cttcctcctcttcctatcccctcc 1797406
>gb|AY017956.1| Oryza sativa microsatellite MRG0281 containing (AG)X17, genomic sequence Length = 234 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 ccaccaacctactcttcctcctcctcct 63 |||||||||| ||| ||||||||||||| Sbjct: 229 ccaccaacctcctcctcctcctcctcct 202
>gb|AC004782.1| Homo sapiens chromosome 5, BAC clone 205e20 (LBNL H170), complete sequence Length = 184706 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 53696 catccatccatccacccacctact 53719 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 53563 catccatccatccacccacctact 53586
>gb|AC160334.2| Mus musculus BAC clone RP23-37D14 from chromosome 9, complete sequence Length = 180527 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caacatccatccatccacca 41 |||||||||||||||||||| Sbjct: 92259 caacatccatccatccacca 92240
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219634 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 caacctactcttcctcctcctcct 63 |||||| ||||||||||||||||| Sbjct: 66835 caacctcctcttcctcctcctcct 66858
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tctcgccacgccgcgccgcaccgc 99 ||||||||||||||||||| |||| Sbjct: 3834 tctcgccacgccgcgccgcgccgc 3811
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 aacctactcttcctcctcctccta 64 ||||||||| |||||||||||||| Sbjct: 12915 aacctactcctcctcctcctccta 12892
>gb|AC149683.2| Bos taurus BAC CH240-493H15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 176832 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 actcttcctcctcctcctatcccc 69 ||||||||| |||||||||||||| Sbjct: 91283 actcttcctgctcctcctatcccc 91306
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence Length = 236084 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactcttc 52 |||||||||||||||| |||||| |||| Sbjct: 100401 catccatccatccacccacctacccttc 100374
>ref|XM_324156.1| Neurospora crassa OR74A hypothetical protein (NCU04800.1) partial mRNA Length = 3285 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tcgccggcttcttcctcctc 236 |||||||||||||||||||| Sbjct: 2519 tcgccggcttcttcctcctc 2538
>ref|XM_955333.1| Neurospora crassa OR74A hypothetical protein (NCU04800.1) partial mRNA Length = 3285 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tcgccggcttcttcctcctc 236 |||||||||||||||||||| Sbjct: 2519 tcgccggcttcttcctcctc 2538
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 tcctcctccggggcctcaacgccg 252 |||||||||||||||||| ||||| Sbjct: 7468691 tcctcctccggggcctcaccgccg 7468668 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 aacctactcttcctcctcctccta 64 ||||||||| |||||||||||||| Sbjct: 4829279 aacctactcctcctcctcctccta 4829256
>ref|XM_846295.1| PREDICTED: Canis familiaris similar to cytochrome P450, family 11, subfamily B, polypeptide 1 isoform 1 precursor (LOC609093), mRNA Length = 1689 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcttcctcctccggggcctc 245 |||||||||||||||||||| Sbjct: 1196 tcttcctcctccggggcctc 1177
>ref|XM_845533.1| PREDICTED: Canis familiaris similar to cytochrome P450, subfamily XIB polypeptide 2 precursor (LOC608494), partial mRNA Length = 1439 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcttcctcctccggggcctc 245 |||||||||||||||||||| Sbjct: 946 tcttcctcctccggggcctc 927
>gb|AC135860.4| Mus musculus BAC clone RP24-441J10 from chromosome 7, complete sequence Length = 196609 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcc 62 |||||||||||||||||||| Sbjct: 108586 cctactcttcctcctcctcc 108605
>ref|XM_914623.2| PREDICTED: Mus musculus RIKEN cDNA C230098I05 gene (C230098I05Rik), mRNA Length = 3942 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 2452 catccatccatccaccaacc 2471
>gb|AC067941.7| Homo sapiens BAC clone RP11-815K3 from 7, complete sequence Length = 215994 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 11621 catccatccatccaccaacc 11640
>gb|AC079306.7| Homo sapiens BAC clone CTD-2506A20 from 7, complete sequence Length = 70638 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggagtgccagaatggggatg 515 |||||||||||||||||||| Sbjct: 62532 ggagtgccagaatggggatg 62513
>ref|XM_983707.1| PREDICTED: Mus musculus RIKEN cDNA C230098I05 gene (C230098I05Rik), mRNA Length = 3926 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 2436 catccatccatccaccaacc 2455
>ref|XM_194378.6| PREDICTED: Mus musculus RIKEN cDNA C230098I05 gene (C230098I05Rik), mRNA Length = 3926 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 2436 catccatccatccaccaacc 2455
>emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 in linkage group 6, complete sequence Length = 176089 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 106700 catccatccatccaccaacc 106681
>emb|CR936360.14| Human DNA sequence from clone RP13-440N7 on chromosome X, complete sequence Length = 154563 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 116326 catccatccatccaccaacc 116307
>ref|XM_569873.1| Cryptococcus neoformans var. neoformans JEC21 rRNA primary transcript binding protein (CNC06110) partial mRNA Length = 2310 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cttcctcctcctcctatcccctcc 72 |||||||||| ||||||||||||| Sbjct: 2259 cttcctcctcttcctatcccctcc 2236
>gb|AC025778.8| Homo sapiens chromosome 16 clone CTD-2504F3, complete sequence Length = 208417 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 187766 catccatccatccaccaacc 187785
>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence Length = 224179 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tcttcctcctcctcctatcccctc 71 |||||||||||||||| ||||||| Sbjct: 213015 tcttcctcctcctcctttcccctc 213038
>gb|AC133865.2| Homo sapiens chromosome 1 clone RP11-93N20, complete sequence Length = 78250 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tactcttcctcctcctcctatccc 68 |||||| ||||||||||||||||| Sbjct: 14992 tactctccctcctcctcctatccc 14969
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 tcctcctccggggcctcaacgccg 252 |||||||||||||||||| ||||| Sbjct: 107246 tcctcctccggggcctcaccgccg 107223
>gb|AC103810.5| Homo sapiens chromosome 17, clone RP11-927P21, complete sequence Length = 203192 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 148559 catccatccatccaccaacc 148540
>gb|AC123805.4| Mus musculus BAC clone RP24-150A12 from chromosome 7, complete sequence Length = 160666 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 38032 catccatccatccaccaacc 38013
>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence Length = 199810 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 36338 catccatccatccaccaacc 36357
>emb|CR356243.16| Zebrafish DNA sequence from clone CH211-209O4 in linkage group 6, complete sequence Length = 216472 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcttcctcctccggggcctc 245 |||||||||||||||||||| Sbjct: 7879 tcttcctcctccggggcctc 7898
>gb|AC123951.3| Mus musculus BAC clone RP23-166M23 from 18, complete sequence Length = 220088 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggtctgggagggaggaagaa 20 |||||||||||||||||||| Sbjct: 88234 ggtctgggagggaggaagaa 88253
>emb|CR677026.2|CNS0FLCU Tetraodon nigroviridis full-length cDNA Length = 1024 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcc 62 |||||||||||||||||||| Sbjct: 398 cctactcttcctcctcctcc 417
>gb|AC100953.12| Mus musculus chromosome 5, clone RP23-73P16, complete sequence Length = 216490 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ctactcttcctcctcctcct 63 |||||||||||||||||||| Sbjct: 166739 ctactcttcctcctcctcct 166758
>gb|AC115747.8| Mus musculus chromosome 10, clone RP23-8P5, complete sequence Length = 193706 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 tccaccaacctactcttcctcctc 58 ||||||||||| |||||||||||| Sbjct: 102630 tccaccaaccttctcttcctcctc 102607
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccct 70 ||||||||||||||||| |||||| Sbjct: 137575 ctcttcctcctcctcctctcccct 137552
>emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in linkage group 1, complete sequence Length = 176472 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 82749 catccatccatccaccaacc 82768
>emb|AL445199.37| Human DNA sequence from clone RP13-439H18 on chromosome 10 Contains the GPR123 gene for G protein-coupled receptor 123, a novel gene (containing KIAA1768, FLJ00378 and FLJ00252), gene FLJ25027, the UTF1 gene for undifferentiated embryonic cell transcription factor 1, the 5' end of the VENTX2 gene for VENT-like homeobox2, a novel gene, a 60S ribosomal protein L5 (RPL5) pseudogene and twenty five CpG islands, complete sequence Length = 212199 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 35702 catccatccatccaccaacc 35683 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 35562 catccatccatccaccaacc 35543 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 35430 catccatccatccaccaacc 35411
>emb|BX908382.8| Human DNA sequence from clone WI2-87105E3 on chromosome X Contains the 5' end of the CRLF2 gene for cytokine receptor-like factor 2, complete sequence Length = 33657 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 31458 catccatccatccaccaacc 31439
>emb|AL356971.10| Human DNA sequence from clone RP11-58A9 on chromosome 6, complete sequence Length = 116576 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acctactcttcctcctcctc 61 |||||||||||||||||||| Sbjct: 78428 acctactcttcctcctcctc 78447
>emb|AL136528.11| Human DNA sequence from clone RP5-1092A11 on chromosome 1p36.2-36.33 Contains the 5' end of the gene for a novel protein (FLJ32825), a novel gene (KIAA0495), two novel genes, the TP73 gene for tumor protein p73, the 5' end of the WDR8 gene for WD repeat domain 8 and five CpG islands, complete sequence Length = 138941 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 42359 catccatccatccaccaacc 42378
>emb|AL096855.48|HS1115A15 Human DNA sequence from clone RP5-1115A15 on chromosome 1p36.11-36.31 Contains part of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (KIAA0458, FLJ38775), a novel gene and a CpG island, complete sequence Length = 178403 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatc 66 |||||||||||||||||||| Sbjct: 57281 ctcttcctcctcctcctatc 57262
>emb|AL050325.20|HSJ824F16 Human DNA sequence from clone RP5-824F16 on chromosome 20 Contains the 5' end of the ANGPT4 gene for angiopoietin 4, part of the gene for a novel protein similar to mouse thrombospondin type 1 domain protein R-spondin and a CpG island, complete sequence Length = 139330 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 89815 catccatccatccaccaacc 89834
>emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P19 on chromosome 6p12.3-21.2 Contains the 3' end of the TFEB gene for transcription factor EB (TCFEB), a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene, the MDFI gene for MyoD family inhibitor, the 5' end of a novel gene and two CpG islands, complete sequence Length = 110665 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 22173 catccatccatccaccaacc 22192
>ref|XM_961986.1| PREDICTED: Tribolium castaneum similar to CG9484-PA (LOC655442), mRNA Length = 8550 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccgccaccatcgccggcttc 227 |||||||||||||||||||| Sbjct: 1759 ccgccaccatcgccggcttc 1778
>gb|BC043270.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 6, mRNA (cDNA clone IMAGE:5297025), complete cds Length = 3299 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggagtgccagaatggggatg 515 |||||||||||||||||||| Sbjct: 561 ggagtgccagaatggggatg 542
>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence Length = 195633 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 acctactcttcctcctcctcctat 65 ||||||||||| |||||||||||| Sbjct: 118175 acctactcttcttcctcctcctat 118152
>gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromosome 7, complete sequence Length = 219717 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 39671 catccatccatccaccaacc 39652
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 caacctactcttcctcctcctcct 63 |||||| ||||||||||||||||| Sbjct: 59604 caacctcctcttcctcctcctcct 59581
>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 aggacgacgcagccgccgccgtcg 291 |||||||||| ||||||||||||| Sbjct: 167162 aggacgacgccgccgccgccgtcg 167139
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 ccaccaacctactcttcctcctcctcct 63 |||||||||| ||| ||||||||||||| Sbjct: 72847 ccaccaacctcctcctcctcctcctcct 72874
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 aggacgacgcagccgccgccgtcg 291 |||||||||| ||||||||||||| Sbjct: 51704 aggacgacgccgccgccgccgtcg 51681
>emb|AL662855.19| Mouse DNA sequence from clone RP23-388J21 on chromosome 11, complete sequence Length = 157088 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 cttggagtgccagaatgggg 512 |||||||||||||||||||| Sbjct: 24826 cttggagtgccagaatgggg 24845
>emb|AL845362.4| Zebrafish DNA sequence from clone CH211-142H2 in linkage group 2 Contains a putative novel gene, a novel gene similar to PTF1 (pancreas transcription factor 1, subunit p48), a novel gene similar to DLGAP1 (discs, large (Drosophila) homolog-associated protein 1) and two CpG islands, complete sequence Length = 161465 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 35 tccaccaacctactcttcctcctcctcc 62 ||||||| ||| |||||||||||||||| Sbjct: 150172 tccaccaccctcctcttcctcctcctcc 150145
>emb|BX663524.6| Zebrafish DNA sequence from clone DKEY-97K15, complete sequence Length = 196030 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 12692 catccatccatccaccaacc 12673
>emb|BX548247.6| Zebrafish DNA sequence from clone DKEY-177G18 in linkage group 23, complete sequence Length = 180406 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 108014 catccatccatccaccaacc 107995
>dbj|AK091294.1| Homo sapiens cDNA FLJ33975 fis, clone DFNES2002817, moderately similar to Mouse mRNA for RNA polymerase I associated factor (PAF53) Length = 2229 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggagtgccagaatggggatg 515 |||||||||||||||||||| Sbjct: 460 ggagtgccagaatggggatg 441
>gb|AC109580.14| Danio rerio strain AB clone busm1-183j13, complete sequence Length = 94348 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 82416 catccatccatccaccaacc 82435
>emb|BX323839.13| Zebrafish DNA sequence from clone CH211-217K17 in linkage group 1, complete sequence Length = 155358 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 118468 catccatccatccaccaacc 118487
>gb|AC079955.9| Homo sapiens chromosome 10 clone RP11-134O16, complete sequence Length = 192042 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 69911 catccatccatccaccaacc 69930
>gb|AC037441.12| Homo sapiens chromosome , clone RP11-87E22, complete sequence Length = 163147 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 40207 catccatccatccaccaacc 40226
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aacctactcttcctcctcctccta 64 ||||||||| |||||||||||||| Sbjct: 6176 aacctactcctcctcctcctccta 6199
>gb|AC026717.4| Homo sapiens chromosome 5 clone CTD-2144F13, complete sequence Length = 69863 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 acatccatccatccaccaacctac 47 ||||||||||||||||| |||||| Sbjct: 55028 acatccatccatccacccacctac 55051
>gb|AC007306.15| Mus musculus strain RIII Fibroblast cell line C127 chromosome 6 clone mgsriii-p1_2, complete sequence Length = 78783 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 caacctactcttcctcctcctcct 63 |||||| ||||||||||||||||| Sbjct: 77573 caacctcctcttcctcctcctcct 77550
>gb|AC099494.3| Homo sapiens chromosome 16 clone RP11-1102P22, complete sequence Length = 143557 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 76597 catccatccatccaccaacc 76578
>gb|AC026692.5| Homo sapiens chromosome 5 clone CTC-257L10, complete sequence Length = 139377 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 acatccatccatccaccaacctac 47 ||||||||||||||||| |||||| Sbjct: 55047 acatccatccatccacccacctac 55070
>gb|AC153570.9| Mus musculus 10 BAC RP23-221F6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216030 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 162720 catccatccatccacccacctact 162697
>gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, complete sequence Length = 237712 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 135578 catccatccatccacccacctact 135601 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 135441 catccatccatccacccacctact 135464
>gb|S80867.1| Ovis aries smooth muscle myosin light chain kinase mRNA, partial cds Length = 1317 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 actcttcctcctcctcctatcccc 69 |||||||||||||||||| ||||| Sbjct: 1315 actcttcctcctcctcctctcccc 1292
>gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome 14, complete sequence Length = 215658 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcctcctcctcctatcccct 70 |||||||||||||||||||| Sbjct: 128415 tcctcctcctcctatcccct 128434
>gb|AC022379.2|AC022379 Homo sapiens chromosome 3 clone 996C6 map 3p, complete sequence Length = 222542 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 2177 catccatccatccaccaacc 2196
>dbj|AK090234.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630023A01 product:unclassifiable, full insert sequence Length = 1920 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 432 catccatccatccaccaacc 451
>emb|AL929518.16| Zebrafish DNA sequence from clone CH211-163F10 in linkage group 2, complete sequence Length = 162473 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 144331 catccatccatccaccaacc 144350 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 144303 catccatccatccaccaacc 144322
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tctcgccacgccgcgccgcaccgc 99 ||||||||||||||||||| |||| Sbjct: 25269228 tctcgccacgccgcgccgcgccgc 25269205
>gb|AC140132.3| Homo sapiens chromosome 5 clone RP11-1308L4, complete sequence Length = 185162 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccct 70 |||| ||||||||||||||||||| Sbjct: 80503 ctctccctcctcctcctatcccct 80480
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 tcctcctccggggcctcaacgccg 252 |||||||||||||||||| ||||| Sbjct: 7466526 tcctcctccggggcctcaccgccg 7466503 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 aacctactcttcctcctcctccta 64 ||||||||| |||||||||||||| Sbjct: 4829394 aacctactcctcctcctcctccta 4829371
>gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome 3R, region 98D-98D, BAC clone BACR09F18, complete sequence Length = 182525 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcgccggcttcttcctcctccggg 240 ||||| |||||||||||||||||| Sbjct: 41850 tcgcctgcttcttcctcctccggg 41873
>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone BACR14L13, complete sequence Length = 197348 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcgccggcttcttcctcctccggg 240 ||||| |||||||||||||||||| Sbjct: 196550 tcgcctgcttcttcctcctccggg 196573
>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence Length = 159741 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tcttcctcctcctcctatcccctc 71 |||||||||||||||| ||||||| Sbjct: 46783 tcttcctcctcctcctttcccctc 46806
>gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosome 10, complete sequence Length = 178780 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ccatccatccaccaacctac 47 |||||||||||||||||||| Sbjct: 142970 ccatccatccaccaacctac 142951
>gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosome 10, complete sequence Length = 222344 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ccatccatccaccaacctac 47 |||||||||||||||||||| Sbjct: 49525 ccatccatccaccaacctac 49506
>gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171460 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tcctcctcctatcccctcccattc 77 |||||||||||| ||||||||||| Sbjct: 154723 tcctcctcctattccctcccattc 154746
>gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192749 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ctactcttcctcctcctcct 63 |||||||||||||||||||| Sbjct: 62299 ctactcttcctcctcctcct 62318
>gb|AC016722.9| Homo sapiens BAC clone RP11-333I13 from 2, complete sequence Length = 149995 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctact 48 |||||||||||||||| ||||||| Sbjct: 102617 catccatccatccacctacctact 102594
>gb|AC091946.5| Homo sapiens chromosome 5 clone RP11-360I2, complete sequence Length = 199128 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatcccct 70 |||| ||||||||||||||||||| Sbjct: 152476 ctctccctcctcctcctatcccct 152453
>gb|AC119793.3| Homo sapiens 12 BAC RP11-390F17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 73625 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 42 acctactcttcctcctcctcctatcccctccc 73 |||| ||| ||||||||||||| ||||||||| Sbjct: 25049 acctcctcctcctcctcctcctctcccctccc 25018
>gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, complete sequence Length = 207611 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 124136 catccatccatccaccaacc 124117
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds Length = 80367 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ctactcttcctcctcctcct 63 |||||||||||||||||||| Sbjct: 58276 ctactcttcctcctcctcct 58295
>gb|AC107885.5| Homo sapiens chromosome 8, clone CTD-2552G2, complete sequence Length = 163298 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ctcttcctcctcctcctatc 66 |||||||||||||||||||| Sbjct: 147231 ctcttcctcctcctcctatc 147212
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcc 62 |||||||||||||||||||| Sbjct: 98933 cctactcttcctcctcctcc 98952
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccgccaccatcgccggcttc 227 |||||||||||||||||||| Sbjct: 818472 ccgccaccatcgccggcttc 818491
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccacgccgcgccgcaccg 98 |||||||||||||||||||| Sbjct: 61508 cgccacgccgcgccgcaccg 61489
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccacgccgcgccgcaccg 98 |||||||||||||||||||| Sbjct: 3388 cgccacgccgcgccgcaccg 3369
>dbj|AK103261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124D08, full insert sequence Length = 2161 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 ccaccaacctactcttcctcctcctcct 63 |||||||||| ||| ||||||||||||| Sbjct: 889 ccaccaacctcctcctcctcctcctcct 862
>dbj|AK069457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019M11, full insert sequence Length = 1508 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 ccaccaacctactcttcctcctcctcct 63 |||||||||| ||| ||||||||||||| Sbjct: 894 ccaccaacctcctcctcctcctcctcct 867
>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence Length = 197913 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcctatcccct 70 |||||||| ||||||||||||| ||||| Sbjct: 41657 cctactctccctcctcctcctagcccct 41684
>emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 in linkage group 19, complete sequence Length = 171679 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 25 catccatccatccaccaacctactcttc 52 |||||||||||||| ||| ||||||||| Sbjct: 41593 catccatccatccatcaatctactcttc 41566
>emb|AL645755.20| Zebrafish DNA sequence from clone RP71-1N18 in linkage group 22, complete sequence Length = 141779 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 acctactcttcctcctcctcctat 65 |||| ||||||||||||||||||| Sbjct: 76632 acctcctcttcctcctcctcctat 76609
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete sequence Length = 140069 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 aggacgacgcagccgccgccgtcg 291 |||||||||| ||||||||||||| Sbjct: 80491 aggacgacgccgccgccgccgtcg 80468
>gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 103 of 118 of the complete sequence Length = 239049 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcgccggcttcttcctcctccggg 240 ||||| |||||||||||||||||| Sbjct: 172229 tcgcctgcttcttcctcctccggg 172252
>dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-651K21, complete sequence Length = 197360 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ttcctcctcctcctatcccctccc 73 ||||||||||| |||||||||||| Sbjct: 33913 ttcctcctccttctatcccctccc 33936
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 caacctactcttcctcctcctcct 63 |||||| ||||||||||||||||| Sbjct: 177545 caacctcctcttcctcctcctcct 177568
>emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in linkage group 1, complete sequence Length = 172227 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 120305 catccatccatccaccaacc 120286
>emb|AL832124.1|HSM803431 Homo sapiens mRNA; cDNA DKFZp686C0910 (from clone DKFZp686C0910) Length = 5249 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggagtgccagaatggggatg 515 |||||||||||||||||||| Sbjct: 2450 ggagtgccagaatggggatg 2431
>gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complete sequence Length = 232607 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 caacctactcttcctcctcc 59 |||||||||||||||||||| Sbjct: 213439 caacctactcttcctcctcc 213420
>gb|AC003663.1|AC003663 Homo sapiens chromosome 17, clone HCIT87G17, complete sequence Length = 132070 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 28061 catccatccatccaccaacc 28042
>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence Length = 190414 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 122161 catccatccatccaccaacc 122180
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 55044 catccatccatccaccaacc 55025
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcctcctcctcctatcccct 70 |||||||||||||||||||| Sbjct: 104945 tcctcctcctcctatcccct 104926
>emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 in linkage group 11, complete sequence Length = 156381 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 84663 catccatccatccaccaacc 84644 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 84623 catccatccatccaccaacc 84604 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 84242 catccatccatccaccaacc 84223
>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence Length = 207606 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 24163 catccatccatccaccaacc 24182
>gb|AC172194.1| Mus musculus BAC clone CH36-165I3 from chromosome 9, complete sequence Length = 197712 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cctactcttcctcctcctcc 62 |||||||||||||||||||| Sbjct: 168409 cctactcttcctcctcctcc 168428
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence Length = 159403 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 cctactcttcctcctcctcctatcccct 70 |||||||| ||||||||||||| ||||| Sbjct: 20036 cctactctccctcctcctcctagcccct 20009
>emb|AL805910.7| Mouse DNA sequence from clone RP23-144K17 on chromosome 4, complete sequence Length = 200933 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 atccatccatccaccaacctactcttcc 53 ||||||||||||||| |||||| ||||| Sbjct: 147814 atccatccatccacctacctacccttcc 147841
>emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chromosome 4, complete sequence Length = 239244 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 173776 catccatccatccaccaacc 173757
>gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, complete sequence Length = 188464 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ctactcttcctcctcctcct 63 |||||||||||||||||||| Sbjct: 98976 ctactcttcctcctcctcct 98957
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 83050 catccatccatccaccaacc 83031
>gb|AC055854.14| Homo sapiens chromosome 8, clone RP11-459E5, complete sequence Length = 138388 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catccatccatccaccaacc 44 |||||||||||||||||||| Sbjct: 115353 catccatccatccaccaacc 115372
>emb|AL627345.11| Mouse DNA sequence from clone RP23-169E7 on chromosome 4, complete sequence Length = 73565 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ctcctcctatcccctcccattctc 79 |||||||| ||||||||||||||| Sbjct: 16836 ctcctcctgtcccctcccattctc 16813
>emb|AL627226.16| Mouse DNA sequence from clone RP23-139P4 on chromosome 4, complete sequence Length = 90450 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcaacatccatccatccacc 40 |||||||||||||||||||| Sbjct: 28795 tcaacatccatccatccacc 28776 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcaacatccatccatccacc 40 |||||||||||||||||||| Sbjct: 28749 tcaacatccatccatccacc 28730 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcaacatccatccatccacc 40 |||||||||||||||||||| Sbjct: 28726 tcaacatccatccatccacc 28707 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcaacatccatccatccacc 40 |||||||||||||||||||| Sbjct: 28703 tcaacatccatccatccacc 28684 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcaacatccatccatccacc 40 |||||||||||||||||||| Sbjct: 28542 tcaacatccatccatccacc 28523 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,687,589 Number of Sequences: 3902068 Number of extensions: 5687589 Number of successful extensions: 435627 Number of sequences better than 10.0: 240 Number of HSP's better than 10.0 without gapping: 249 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 429040 Number of HSP's gapped (non-prelim): 6586 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
