ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3l02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X14107.1|CHHVPSBD Hordeum vulgare chloroplast psbB, psbH, petB and petD Length = 5221 Score = 1017 bits (513), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2240 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 2299 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2300 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 2359 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2360 gccccgggttgggggactactccttttatgggggtcgcaatggctttattcgctatattc 2419 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2420 ctatctatcattttagaaatttataattcttccattttactggatggaattttaaccaat 2479 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 taggtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 2539 Query: 301 gtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcgg 360 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2540 gtttaagctctacatttctagatattatggtagttcgaccgcggaatttttttgtttcgg 2599 Query: 361 tatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2600 tatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaaa 2659 Query: 421 gggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2660 gggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatct 2719 Query: 481 ggaacacgaaatagatagagtggatcnnnnnnnntggaactatgattcatactcactatt 540 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2720 ggaacacgaaatagatagagtggatcaaaaaaaatggaactatgattcatactcactatt 2779 Query: 541 aagacctcgcaaccagactg-aaaattcaagtagttct 577 |||||||||||||||||||| ||||||||||||||||| Sbjct: 2780 aagacctcgcaaccagactgaaaaattcaagtagttct 2817
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 971 bits (490), Expect = 0.0 Identities = 555/579 (95%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70741 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctaaacctagg 70800 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70801 ccaaaacaaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 70860 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 70861 gccccgggttgggggactactccttttatgggggtcgcaatggctttattcgctatattc 70920 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 70921 ctatctatcattttagaaatttataattcttccgttttactggacggaattttaaccaat 70980 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70981 taggtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 71040 Query: 301 gtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcgg 360 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 71041 gtttaagatctacatttctagatattatggtagttcgaccgcggaatttttttgtttcgg 71100 Query: 361 tatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71101 tatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaaa 71160 Query: 421 gggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71161 gggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatct 71220 Query: 481 ggaacacgaaatagatagagtggatc-nnnnnnnntggaactatgattcatactcactat 539 |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 71221 ggaacacgaaatagatagagtggatcaaaaaaaaatggaactatgattcatactcactat 71280 Query: 540 taagacctcgcaaccagactg-aaaattcaagtagttct 577 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 71281 taagacctcgcaaccagactgaaaaattcaagtagttct 71319
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 753 bits (380), Expect = 0.0 Identities = 517/565 (91%), Gaps = 2/565 (0%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 72769 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctagacctaag 72828 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 72829 ccaaaacggactggcgcaggtagtttattgaaacccttgaattcggaatatgggaaagtt 72888 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 72889 gctccgggttgggggactactccttttatgggggtcgcaatggctttattcgcgatattc 72948 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| Sbjct: 72949 ctatctataattttagaaatttataattcttctgttttactggacggaattttaacgaat 73008 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatcc-aaaaaagcctttct 299 ||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||||| Sbjct: 73009 taggtttctactaactaaaactatgacttcatagtttttccatccaaaaaaagcctttct 73068 Query: 300 agtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcg 359 | ||||||||| ||||||||||| ||| |||||||||||||| || | |||| | Sbjct: 73069 actttaagctccacatttctagacattctggtagttcgaccgtgg-atttttttgttttg 73127 Query: 360 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73128 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 73187 Query: 420 agggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73188 ggggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 73247 Query: 480 tggaacacgaaatagatagagtggatcnnnnnnnntggaactatgattcatactcactat 539 |||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 73248 tggaacacgaaatacatagagtggatcaaaaaaaaaggaactatgattcatactcactat 73307 Query: 540 taagacctcgcaaccagactgaaaa 564 | |||||||||||||||||| |||| Sbjct: 73308 ttagacctcgcaaccagacttaaaa 73332
>emb|X05422.1|CHZMPSB Maize chloroplast psbB-psbF-petB-petD gene cluster Length = 5329 Score = 753 bits (380), Expect = 0.0 Identities = 517/565 (91%), Gaps = 2/565 (0%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 2426 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctagacctaag 2485 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2486 ccaaaacggactggcgcaggtagtttattgaaacccttgaattcggaatatgggaaagtt 2545 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 2546 gctccgggttgggggactactccttttatgggggtcgcaatggctttattcgcgatattc 2605 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| Sbjct: 2606 ctatctataattttagaaatttataattcttctgttttactggacggaattttaacgaat 2665 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatcc-aaaaaagcctttct 299 ||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||||| Sbjct: 2666 taggtttctactaactaaaactatgacttcatagtttttccatccaaaaaaagcctttct 2725 Query: 300 agtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcg 359 | ||||||||| ||||||||||| ||| |||||||||||||| || | |||| | Sbjct: 2726 actttaagctccacatttctagacattctggtagttcgaccgtgg-atttttttgttttg 2784 Query: 360 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2785 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 2844 Query: 420 agggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2845 ggggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 2904 Query: 480 tggaacacgaaatagatagagtggatcnnnnnnnntggaactatgattcatactcactat 539 |||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 2905 tggaacacgaaatacatagagtggatcaaaaaaaaaggaactatgattcatactcactat 2964 Query: 540 taagacctcgcaaccagactgaaaa 564 | |||||||||||||||||| |||| Sbjct: 2965 ttagacctcgcaaccagacttaaaa 2989
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 710 bits (358), Expect = 0.0 Identities = 470/507 (92%), Gaps = 2/507 (0%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 72782 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctagacctaag 72841 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 72842 ccaaaacggactggcgcaggtagtttattgaaacccttgaattcggaatatgggaaagtt 72901 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 72902 gctccgggttgggggactactccttttatgggggtcgcaatggctttattcgcgatattc 72961 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| Sbjct: 72962 ctatctataattttagaaatttataattcttctgttttactggacggaattttaacgaat 73021 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatcc-aaaaaagcctttct 299 ||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||||| Sbjct: 73022 taggtttctactaactaaaactatgacttcatagtttttccatccaaaaaaagcctttct 73081 Query: 300 agtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcg 359 | ||||||||| ||||||||||| ||| |||||||||||||| || | |||| | Sbjct: 73082 actttaagctccacatttctagacattctggtagttcgaccgtgg-atttttttgttttg 73140 Query: 360 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73141 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 73200 Query: 420 agggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73201 ggggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 73260 Query: 480 tggaacacgaaatagatagagtggatc 506 |||||||||||||| |||||||||||| Sbjct: 73261 tggaacacgaaatacatagagtggatc 73287 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 516 ggaactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 ||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 73298 ggaactatgattcatactcactatttagacctcgcaaccagacttaaaa 73346
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 694 bits (350), Expect = 0.0 Identities = 468/507 (92%), Gaps = 2/507 (0%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 135050 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctagacctaag 135109 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135110 ccaaaacggactggcgcaggtagtttattgaaacccttgaattcggaatatgggaaagtt 135169 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 135170 gctccgggttgggggactactccttttatgggggtcgcaatggctttattcgcgatattc 135229 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| Sbjct: 135230 ctatctataattttagaaatttataattcttctgttttactggacggaattttaacgaat 135289 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatcc-aaaaaagcctttct 299 ||||||||||||||||||||||| || ||| |||||| |||||| |||||||||||||| Sbjct: 135290 taggtttctactaactaaaactatgacttcatagttttcccatccaaaaaaagcctttct 135349 Query: 300 agtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcg 359 | ||||||||| ||||||||||| ||| |||||||||||||| || | |||| | Sbjct: 135350 actttaagctccacatttctagacattctggtagttcgaccgtgg-atttttttgttttg 135408 Query: 360 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 419 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135409 gtatttctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 135468 Query: 420 agggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 479 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135469 agggcctgttatctctatcaagatgattctaattcgtcggatattatttattctagtatc 135528 Query: 480 tggaacacgaaatagatagagtggatc 506 |||||||||||||| |||||||||||| Sbjct: 135529 tggaacacgaaatacatagagtggatc 135555 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 516 ggaactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135566 ggaactatgattcatactcactatttagacctcgcaaccagactgaaaa 135614
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 694 bits (350), Expect = 0.0 Identities = 468/507 (92%), Gaps = 2/507 (0%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 73424 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctagacctaag 73483 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 73484 ccaaaacggactggcgcaggtagtttattgaaacccttgaattcggaatatgggaaagtt 73543 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 73544 gctccgggttgggggactactccttttatgggggtcgcaatggctttattcgcgatattc 73603 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| Sbjct: 73604 ctatctataattttagaaatttataattcttctgttttactggacggaattttaacgaat 73663 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatcc-aaaaaagcctttct 299 ||||||||||||||||||||||| || ||| |||||| |||||| |||||||||||||| Sbjct: 73664 taggtttctactaactaaaactatgacttcatagttttcccatccaaaaaaagcctttct 73723 Query: 300 agtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcg 359 | ||||||||| ||||||||||| ||| |||||||||||||| || | |||| | Sbjct: 73724 actttaagctccacatttctagacattctggtagttcgaccgtgg-atttttttgttttg 73782 Query: 360 gtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 419 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73783 gtatttctggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa 73842 Query: 420 agggcctgttatctctatcaagatgattctaattcgtcagatattatttattctagtatc 479 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 73843 agggcctgttatctctatcaagatgattctaattcgtcggatattatttattctagtatc 73902 Query: 480 tggaacacgaaatagatagagtggatc 506 |||||||||||||| |||||||||||| Sbjct: 73903 tggaacacgaaatacatagagtggatc 73929 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 516 ggaactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 73940 ggaactatgattcatactcactatttagacctcgcaaccagactgaaaa 73988
>emb|X54749.1|CHTAPSG Triticum aestivum chloroplast psbB, orf38, psbN, psbH, petB genes Length = 2880 Score = 674 bits (340), Expect = 0.0 Identities = 372/385 (96%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2496 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctaaacctagg 2555 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2556 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 2615 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2616 gccccgggttgggggactactccttttatgggggtcgcaatggctttattcgctatattc 2675 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 2676 ctatctatcattttagaaatttataattcttccgttttactggacggaattttaaccaat 2735 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2736 taggtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 2795 Query: 301 gtttaagctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcgg 360 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2796 gtttaagatctacatttctagatattatggtagttcgaccgcggaatttttttgtttcgg 2855 Query: 361 tatctctggaatatgagtgtgtgac 385 ||||||||||||||||||||||||| Sbjct: 2856 tatctctggaatatgagtgtgtgac 2880
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 70875 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 70934 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 70935 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 70994 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 70995 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 71054 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 71055 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 71114 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 71115 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 71174 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 71175 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 71234 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 71235 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 71294 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71295 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 71354 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 71355 cgaaatagatagagtggatc 71374 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 71390 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 71449 Query: 575 tct 577 ||| Sbjct: 71450 tct 71452
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 70875 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 70934 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 70935 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 70994 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 70995 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 71054 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 71055 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 71114 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 71115 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 71174 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 71175 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 71234 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 71235 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 71294 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71295 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 71354 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 71355 cgaaatagatagagtggatc 71374 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 71390 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 71449 Query: 575 tct 577 ||| Sbjct: 71450 tct 71452
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 70819 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 70878 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 70879 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 70938 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 70939 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 70998 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 70999 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 71058 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 71059 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 71118 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 71119 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 71178 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 71179 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 71238 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71239 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 71298 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 71299 cgaaatagatagagtggatc 71318 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 71334 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 71393 Query: 575 tct 577 ||| Sbjct: 71394 tct 71396
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 70867 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 70926 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 70927 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 70986 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 70987 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 71046 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 71047 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 71106 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 71107 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 71166 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 71167 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 71226 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 71227 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 71286 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71287 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 71346 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 71347 cgaaatagatagagtggatc 71366 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 71382 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 71441 Query: 575 tct 577 ||| Sbjct: 71442 tct 71444
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 79907 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 79848 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 79847 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 79788 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 79787 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 79728 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 79727 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 79668 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 79667 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 79608 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 79607 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 79548 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 79547 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 79488 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 79487 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 79428 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 79427 cgaaatagatagagtggatc 79408 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 79393 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 79334 Query: 575 tct 577 ||| Sbjct: 79333 tct 79331
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 9198834 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 9198775 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 9198774 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 9198715 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 9198714 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 9198655 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 9198654 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 9198595 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 9198594 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 9198535 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 9198534 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 9198475 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 9198474 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 9198415 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9198414 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 9198355 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 9198354 cgaaatagatagagtggatc 9198335 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 9121881 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 9121822 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 9121821 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 9121762 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 9121761 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 9121702 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 9121701 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 9121642 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 9121641 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 9121582 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 9121581 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 9121522 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 9121521 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 9121462 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9121461 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 9121402 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 9121401 cgaaatagatagagtggatc 9121382 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 9198320 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 9198261 Query: 575 tct 577 ||| Sbjct: 9198260 tct 9198258 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 9121367 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 9121308 Query: 575 tct 577 ||| Sbjct: 9121307 tct 9121305
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 656 bits (331), Expect = 0.0 Identities = 457/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 70798 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 70857 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 70858 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 70917 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 70918 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 70977 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 70978 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 71037 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 71038 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 71097 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 71098 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 71157 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 71158 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 71217 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71218 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 71277 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 71278 cgaaatagatagagtggatc 71297 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 71313 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 71372 Query: 575 tct 577 ||| Sbjct: 71373 tct 71375
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 648 bits (327), Expect = 0.0 Identities = 456/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 69075 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 69134 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||| ||||||||||||||| || |||| Sbjct: 69135 aaactcgcgtaggtaatttattgaaacccttgaatttggaatatgggaaagtagctccgg 69194 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 69195 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 69254 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 69255 ttattttagaaatttataattcttccattttactggacggaattttaatgaattaggttt 69314 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 69315 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 69374 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 69375 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 69434 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 69435 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 69494 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 69495 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 69554 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 69555 cgaaatagatagagtggatc 69574 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 69590 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 69649 Query: 575 tct 577 ||| Sbjct: 69650 tct 69652
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 648 bits (327), Expect = 0.0 Identities = 456/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 3139 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 3198 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||| ||||||||||||||| || |||| Sbjct: 3199 aaactcgcgtaggtaatttattgaaacccttgaatttggaatatgggaaagtagctccgg 3258 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 3259 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 3318 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 3319 ttattttagaaatttataattcttccattttactggacggaattttaatgaattaggttt 3378 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 3379 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 3438 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 3439 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 3498 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 3499 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 3558 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3559 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 3618 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 3619 cgaaatagatagagtggatc 3638 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 3654 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 3713 Query: 575 tct 577 ||| Sbjct: 3714 tct 3716
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 648 bits (327), Expect = 0.0 Identities = 456/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 10362683 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 10362742 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||| ||||||||||||||| || |||| Sbjct: 10362743 aaactcgcgtaggtaatttattgaaacccttgaatttggaatatgggaaagtagctccgg 10362802 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 10362803 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 10362862 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 10362863 ttattttagaaatttataattcttccattttactggacggaattttaatgaattaggttt 10362922 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 10362923 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 10362982 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 10362983 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 10363042 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 10363043 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 10363102 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10363103 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 10363162 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 10363163 cgaaatagatagagtggatc 10363182 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 10363198 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 10363257 Query: 575 tct 577 ||| Sbjct: 10363258 tct 10363260
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 648 bits (327), Expect = 0.0 Identities = 456/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 9266181 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 9266122 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 9266121 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 9266062 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 9266061 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 9266002 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 9266001 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 9265942 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 9265941 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 9265882 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 9265881 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 9265822 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 9265821 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 9265762 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 9265761 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctgtaaca 9265702 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 9265701 cgaaatagatagagtggatc 9265682 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| || Sbjct: 3778051 attaaatagaatttatggctacacaaaccgttgaagatagttctagacctagaccaagac 3777992 Query: 68 gaact 72 ||||| Sbjct: 3777991 gaact 3777987 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 9265666 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 9265607 Query: 575 tct 577 ||| Sbjct: 9265606 tct 9265604 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagat 45 ||||||| |||| ||||||||||||| ||||||||||| Sbjct: 10823031 attaaatgtaatatatggctacacaacccgttgaagat 10823068
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 648 bits (327), Expect = 0.0 Identities = 456/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 77394 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 77335 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 77334 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 77275 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 77274 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 77215 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 77214 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 77155 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 77154 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 77095 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 77094 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 77035 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 77034 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 76975 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 76974 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctgtaaca 76915 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 76914 cgaaatagatagagtggatc 76895 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 76879 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 76820 Query: 575 tct 577 ||| Sbjct: 76819 tct 76817
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 648 bits (327), Expect = 0.0 Identities = 456/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 10368722 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 10368781 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||| ||||||||||||||| || |||| Sbjct: 10368782 aaactcgcgtaggtaatttattgaaacccttgaatttggaatatgggaaagtagctccgg 10368841 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 10368842 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 10368901 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 10368902 ttattttagaaatttataattcttccattttactggacggaattttaatgaattaggttt 10368961 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 10368962 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 10369021 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 10369022 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 10369081 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 10369082 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 10369141 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10369142 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 10369201 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 10369202 cgaaatagatagagtggatc 10369221 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 10369237 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 10369296 Query: 575 tct 577 ||| Sbjct: 10369297 tct 10369299
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 640 bits (323), Expect = e-180 Identities = 455/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 5647132 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 5647191 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 5647192 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 5647251 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 5647252 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 5647311 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||| Sbjct: 5647312 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattacgttt 5647371 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 5647372 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 5647431 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 5647432 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 5647491 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 5647492 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 5647551 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5647552 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 5647611 Query: 487 cgaaatagatagagtggatc 506 | |||||||||||||||||| Sbjct: 5647612 caaaatagatagagtggatc 5647631 Score = 250 bits (126), Expect = 5e-63 Identities = 174/190 (91%) Strand = Plus / Minus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtcgca 159 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 13436348 aattcggaatatgggaaagtagctccgggttgggggactactccttttatgggggtcgca 13436289 Query: 160 atggctttattcgctatattcctctctatcattttagaaatttataattcttccctttta 219 |||||||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 13436288 atggctttattcgcggtattcctatctattattttagaaatttataattcttccgtttta 13436229 Query: 220 ctggatggaattttaaccaattaggtttctactaactaaaactaggaagtcagagttttt 279 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 13436228 ctggacggaattttaatgaattaggtttctactaacgaaaactacgaagtcatagttttt 13436169 Query: 280 ccatccaaaa 289 | ||||||| Sbjct: 13436168 cattccaaaa 13436159 Score = 153 bits (77), Expect = 8e-34 Identities = 167/196 (85%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 20 ttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcag 79 ||||||||||||||||||||||||||||||||| |||| | |||| ||||||| | | || Sbjct: 9252443 ttatggctacacaaaccgttgaagatagttctagaccttgaccaagacgaactcgcgtag 9252502 Query: 80 gtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggacta 139 ||| |||| |||||| ||||||||| ||||||||||| || || | ||||||||||| || Sbjct: 9252503 gtaatttattgaaactcttgaattcagaatatgggaatgtagctctgggttgggggagta 9252562 Query: 140 ctcctttt--ctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| |||| |||||||||||||||||||| || ||||||| ||||| ||||| || Sbjct: 9252563 ctcattttaggggggggtcgcaatggctttatacgtggtattcctatctattatttttga 9252622 Query: 198 aatttataattcttcc 213 |||||||| ||||||| Sbjct: 9252623 aatttatagttcttcc 9252638 Score = 65.9 bits (33), Expect = 1e-07 Identities = 56/63 (88%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 5647646 aactatgattcatattaactattcagacctcacaaccagactgaaaaaaattcaagtagt 5647705 Query: 575 tct 577 ||| Sbjct: 5647706 tct 5647708
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 640 bits (323), Expect = e-180 Identities = 455/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 23188241 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 23188182 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| |||||||||||||||| |||||||||||||| || |||| Sbjct: 23188181 aaactcgcgtaggtaatttattgaaacccttgaattcagaatatgggaaagtagctccgg 23188122 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 23188121 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 23188062 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 23188061 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 23188002 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 23188001 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 23187942 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 23187941 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 23187882 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 23187881 ggaatatgagtgtgtgacttgttagaatttgttcctattgataatacatagaaagcacct 23187822 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 23187821 gttatctctatcaagatgattctaattcgtcggatattatttgttctagtatctggaaca 23187762 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 23187761 cgaaatagatagagtggatc 23187742 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 23187726 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 23187667 Query: 575 tct 577 ||| Sbjct: 23187666 tct 23187664
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 640 bits (323), Expect = e-180 Identities = 455/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 138889 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 138830 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| |||||||||||||||| |||||||||||||| || |||| Sbjct: 138829 aaactcgcgtaggtaatttattgaaacccttgaattcagaatatgggaaagtagctccgg 138770 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 138769 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 138710 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 138709 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 138650 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 138649 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 138590 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 138589 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 138530 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 138529 ggaatatgagtgtgtgacttgttagaatttgttcctattgataatacatagaaagcacct 138470 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 138469 gttatctctatcaagatgattctaattcgtcggatattatttgttctagtatctggaaca 138410 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 138409 cgaaatagatagagtggatc 138390 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 138374 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 138315 Query: 575 tct 577 ||| Sbjct: 138314 tct 138312
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 640 bits (323), Expect = e-180 Identities = 455/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 23003 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 22944 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| |||||||||||||||| |||||||||||||| || |||| Sbjct: 22943 aaactcgcgtaggtaatttattgaaacccttgaattcagaatatgggaaagtagctccgg 22884 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 22883 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 22824 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 22823 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 22764 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 22763 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 22704 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 22703 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 22644 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 22643 ggaatatgagtgtgtgacttgttagaatttgttcctattgataatacatagaaagcacct 22584 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 22583 gttatctctatcaagatgattctaattcgtcggatattatttgttctagtatctggaaca 22524 Query: 487 cgaaatagatagagtggatc 506 |||||||||||||||||||| Sbjct: 22523 cgaaatagatagagtggatc 22504 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 22488 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 22429 Query: 575 tct 577 ||| Sbjct: 22428 tct 22426
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 640 bits (323), Expect = e-180 Identities = 455/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 5647121 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 5647180 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 5647181 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 5647240 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 5647241 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 5647300 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||| Sbjct: 5647301 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattacgttt 5647360 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 5647361 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 5647420 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 5647421 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 5647480 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 5647481 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 5647540 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5647541 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 5647600 Query: 487 cgaaatagatagagtggatc 506 | |||||||||||||||||| Sbjct: 5647601 caaaatagatagagtggatc 5647620 Score = 250 bits (126), Expect = 5e-63 Identities = 174/190 (91%) Strand = Plus / Minus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtcgca 159 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 13390622 aattcggaatatgggaaagtagctccgggttgggggactactccttttatgggggtcgca 13390563 Query: 160 atggctttattcgctatattcctctctatcattttagaaatttataattcttccctttta 219 |||||||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 13390562 atggctttattcgcggtattcctatctattattttagaaatttataattcttccgtttta 13390503 Query: 220 ctggatggaattttaaccaattaggtttctactaactaaaactaggaagtcagagttttt 279 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 13390502 ctggacggaattttaatgaattaggtttctactaacgaaaactacgaagtcatagttttt 13390443 Query: 280 ccatccaaaa 289 | ||||||| Sbjct: 13390442 cattccaaaa 13390433 Score = 153 bits (77), Expect = 8e-34 Identities = 167/196 (85%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 20 ttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcag 79 ||||||||||||||||||||||||||||||||| |||| | |||| ||||||| | | || Sbjct: 9252328 ttatggctacacaaaccgttgaagatagttctagaccttgaccaagacgaactcgcgtag 9252387 Query: 80 gtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggacta 139 ||| |||| |||||| ||||||||| ||||||||||| || || | ||||||||||| || Sbjct: 9252388 gtaatttattgaaactcttgaattcagaatatgggaatgtagctctgggttgggggagta 9252447 Query: 140 ctcctttt--ctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| |||| |||||||||||||||||||| || ||||||| ||||| ||||| || Sbjct: 9252448 ctcattttaggggggggtcgcaatggctttatacgtggtattcctatctattatttttga 9252507 Query: 198 aatttataattcttcc 213 |||||||| ||||||| Sbjct: 9252508 aatttatagttcttcc 9252523 Score = 65.9 bits (33), Expect = 1e-07 Identities = 56/63 (88%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 5647635 aactatgattcatattaactattcagacctcacaaccagactgaaaaaaattcaagtagt 5647694 Query: 575 tct 577 ||| Sbjct: 5647695 tct 5647697
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 640 bits (323), Expect = e-180 Identities = 455/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 1651 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 1710 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 1711 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 1770 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 1771 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 1830 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||| Sbjct: 1831 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattacgttt 1890 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 1891 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 1950 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 1951 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 2010 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 2011 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 2070 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2071 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 2130 Query: 487 cgaaatagatagagtggatc 506 | |||||||||||||||||| Sbjct: 2131 caaaatagatagagtggatc 2150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 56/63 (88%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 2165 aactatgattcatattaactattcagacctcacaaccagactgaaaaaaattcaagtagt 2224 Query: 575 tct 577 ||| Sbjct: 2225 tct 2227
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 640 bits (323), Expect = e-180 Identities = 455/500 (91%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 5753 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 5694 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 5693 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 5634 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 5633 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 5574 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||| Sbjct: 5573 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattacgttt 5514 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 5513 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 5454 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctct 367 ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct: 5453 ctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctct 5394 Query: 368 ggaatatgagtgtgtgacttgttagaa-ttgatcctattgataatacatagaaagggcct 426 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct: 5393 ggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacct 5334 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5333 gttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaaca 5274 Query: 487 cgaaatagatagagtggatc 506 | |||||||||||||||||| Sbjct: 5273 caaaatagatagagtggatc 5254 Score = 65.9 bits (33), Expect = 1e-07 Identities = 56/63 (88%), Gaps = 3/63 (4%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 5239 aactatgattcatattaactattcagacctcacaaccagactgaaaaaaattcaagtagt 5180 Query: 575 tct 577 ||| Sbjct: 5179 tct 5177
>emb|X54751.1|CHTAPSGB Triticum aestivum chloroplast psbH, petB, petD, rpoA genes Length = 3240 Score = 618 bits (312), Expect = e-174 Identities = 365/385 (94%), Gaps = 2/385 (0%) Strand = Plus / Plus Query: 195 agaaatttataattcttcccttttactggatggaattttaaccaattaggtttctactaa 254 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 agaaatttataattcttccgttttactggacggaattttaaccaattaggtttctactaa 60 Query: 255 ctaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaagctctaca 314 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 61 ctaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaagatctaca 120 Query: 315 tttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatat 374 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 tttctagatattatggtagttcgaccgcggaatttttttgtttcggtatctctggaatat 180 Query: 375 gagtgtgtgacttgttagaattgatcctattgataatacatagaaagggcctgttatctc 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gagtgtgtgacttgttagaattgatcctattgataatacatagaaagggcctgttatctc 240 Query: 435 tatcaagatgattctaattcgtcagatattatttattctagtatctggaacacgaaatag 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tatcaagatgattctaattcgtcagatattatttattctagtatctggaacacgaaatag 300 Query: 495 atagagtggatc-nnnnnnnntggaactatgattcatactcactattaagacctcgcaac 553 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atagagtggatcaaaaaaaaatggaactatgattcatactcactattaagacctcgcaac 360 Query: 554 cagactg-aaaattcaagtagttct 577 ||||||| ||||||||||||||||| Sbjct: 361 cagactgaaaaattcaagtagttct 385
>emb|X07672.1|CHSCPBH Secale cereale chloroplast psbB and psbH genes Length = 2579 Score = 583 bits (294), Expect = e-163 Identities = 315/322 (97%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2258 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctaaacctagg 2317 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2318 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 2377 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2378 gccccgggttgggggactactccttttatgggggtcgcaatggctttattcgctatattc 2437 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 2438 ctatctatcattttagaaatttataattcttccgttttactggacggaattttaaccaat 2497 Query: 241 taggtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2498 taagtttctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 2557 Query: 301 gtttaagctctacatttctaga 322 ||||||| |||||||||||||| Sbjct: 2558 gtttaagatctacatttctaga 2579
>emb|X04710.1|CHTAPSBH Wheat chloroplast psbH gene for 10kDa phosphoprotein Length = 322 Score = 482 bits (243), Expect = e-133 Identities = 258/263 (98%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 accaatgattaaatagaatttatggctacacaaaccgttgaagatagttctaaacctagg 119 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 179 Query: 121 gccccgggttgggggactactccttttctgggggtcgcaatggctttattcgctatattc 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 180 gccccgggttgggggactactccttttatgggggtcgcaatggctttattcgctatattc 239 Query: 181 ctctctatcattttagaaatttataattcttcccttttactggatggaattttaaccaat 240 || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 240 ctatctatcattttagaaatttataattcttccgttttactggacggaattttaaccaat 299 Query: 241 taggtttctactaactaaaacta 263 ||||||||||||||||||||||| Sbjct: 300 taggtttctactaactaaaacta 322
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 426 bits (215), Expect = e-116 Identities = 308/339 (90%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 2443618 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 2443677 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 2443678 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 2443737 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 2443738 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 2443797 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 2443798 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 2443857 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 2443858 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 2443917 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaa 346 ||||||||||||||| ||| |||||||||||||| |||| Sbjct: 2443918 ctctacatttctagacattctggtagttcgaccgtggaa 2443956
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 426 bits (215), Expect = e-116 Identities = 308/339 (90%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 122028 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 122087 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 122088 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 122147 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 122148 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 122207 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 122208 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 122267 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 122268 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 122327 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaa 346 ||||||||||||||| ||| |||||||||||||| |||| Sbjct: 122328 ctctacatttctagacattctggtagttcgaccgtggaa 122366
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 426 bits (215), Expect = e-116 Identities = 308/339 (90%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 30208 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 30267 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 30268 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 30327 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 30328 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 30387 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 30388 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 30447 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttctagtttaag 307 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 30448 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttctactttaag 30507 Query: 308 ctctacatttctagatattatggtagttcgaccgcggaa 346 ||||||||||||||| ||| |||||||||||||| |||| Sbjct: 30508 ctctacatttctagacattctggtagttcgaccgtggaa 30546
>emb|X12695.1|CHOSPSBF Rice chloroplast psbH gene for 10 kD phosphoprotein potential component of photosystem II Length = 340 Score = 367 bits (185), Expect = 3e-98 Identities = 266/293 (90%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 46 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 105 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 106 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 165 Query: 128 gttgggggactactccttttctgggggtcgcaatggctttattcgctatattcctctcta 187 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| Sbjct: 166 gttgggggactactccttttatgggggtcgcaatggctttattcgcggtattcctatcta 225 Query: 188 tcattttagaaatttataattcttcccttttactggatggaattttaaccaattaggttt 247 | |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| Sbjct: 226 ttattttagaaatttataattcttccgttttactggacggaattttaatgaattaggttt 285 Query: 248 ctactaactaaaactaggaagtcagagtttttccatccaaaaaagcctttcta 300 |||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 286 ctactaacgaaaactacgaagtcatagtttttccatccaaaagagcctttcta 338
>gb|M35995.1|RICCPETB Rice chloroplast apocytochrome b6 (petB) gene, complete cds Length = 1682 Score = 285 bits (144), Expect = 8e-74 Identities = 186/201 (92%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 307 gctctacatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctc 366 |||||||||||||||| ||| |||||||||||||| |||| ||||||||||||| Sbjct: 1 gctctacatttctagacattctggtagttcgaccgtggaattttttggtttcggtatctc 60 Query: 367 tggaatatgagtgtgtgacttgttagaatt-gatcctattgataatacatagaaagggcc 425 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 61 tggaatatgagtgtgtgacttgttagaatttgctcctattgataatacatagaaagcacc 120 Query: 426 tgttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaac 485 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 121 tgttatctctatcaagatgattctaattcgtcggatattatttattctagtatctggaac 180 Query: 486 acgaaatagatagagtggatc 506 ||||||||||||||||||||| Sbjct: 181 acgaaatagatagagtggatc 201 Score = 73.8 bits (37), Expect = 6e-10 Identities = 57/63 (90%), Gaps = 3/63 (4%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactg---aaaattcaagtagt 574 |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 217 aactatgattcatattaactattcagacctcgcaaccagactgaaaaaaattcaagtagt 276 Query: 575 tct 577 ||| Sbjct: 277 tct 279
>ref|XM_481021.1| Oryza sativa (japonica cultivar-group), mRNA Length = 222 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 22 atggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcaggt 81 ||||||||||||||||||||||||||||||| |||| | |||| || |||| | | |||| Sbjct: 1 atggctacacaaaccgttgaagatagttctagacctggaccaagacaaactcgcgtaggt 60 Query: 82 agtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactact 141 | |||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 61 aatttattgaaacccttgaattcggaatatgggaaagtagctccgggttgggggactact 120 Query: 142 ccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaatt 201 |||||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||| Sbjct: 121 ccttttatgggggtcgcaatggctttattcgcggtattcctatctattattttagaaatt 180 Query: 202 tataattcttcccttttactggatggaattttaa 235 |||||||||||| |||||||||| |||||||||| Sbjct: 181 tataattcttccgttttactggacggaattttaa 214
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 272 bits (137), Expect = 1e-69 Identities = 212/237 (89%), Gaps = 3/237 (1%) Strand = Plus / Minus Query: 273 agtttttccatccaaaaaagcct--ttctagtttaagctctacatttctagatattatgg 330 ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| ||| ||| Sbjct: 29139 agtttctccatccaaaagagcctctttctactttaagctctatatttctagacattctgg 29080 Query: 331 tagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgacttgtt 390 ||||||||||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 29079 tagttcgaccgtgattttttttggtttcggtatctctggaatatgagtgggtgacttgtt 29020 Query: 391 agaatt-gatcctattgataatacatagaaagggcctgttatctctatcaagatgattct 449 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29019 agaatttgctcctattgataatacatagaaagggcctgttatctctatcaagatgattct 28960 Query: 450 aattcgtcagatattatttattctagtatctggaacacgaaatagatagagtggatc 506 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 28959 aattcgtcggatattatttattctagtatttggaacacgaaatagatagaatggatc 28903 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 |||||||||||||| | |||||| ||||||| ||||||||||||||| Sbjct: 28888 aactatgattcatattaactattcagacctcacaaccagactgaaaa 28842
>gb|AC084295.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015K03, complete sequence Length = 89172 Score = 272 bits (137), Expect = 1e-69 Identities = 212/237 (89%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 273 agtttttccatccaaaaaagcct--ttctagtttaagctctacatttctagatattatgg 330 ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| ||| ||| Sbjct: 15496 agtttctccatccaaaagagcctctttctactttaagctctatatttctagacattctgg 15555 Query: 331 tagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgacttgtt 390 ||||||||||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 15556 tagttcgaccgtgattttttttggtttcggtatctctggaatatgagtgggtgacttgtt 15615 Query: 391 agaatt-gatcctattgataatacatagaaagggcctgttatctctatcaagatgattct 449 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15616 agaatttgctcctattgataatacatagaaagggcctgttatctctatcaagatgattct 15675 Query: 450 aattcgtcagatattatttattctagtatctggaacacgaaatagatagagtggatc 506 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 15676 aattcgtcggatattatttattctagtatttggaacacgaaatagatagaatggatc 15732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 |||||||||||||| | |||||| ||||||| ||||||||||||||| Sbjct: 15747 aactatgattcatattaactattcagacctcacaaccagactgaaaa 15793
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 272 bits (137), Expect = 1e-69 Identities = 212/237 (89%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 273 agtttttccatccaaaaaagcct--ttctagtttaagctctacatttctagatattatgg 330 ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| ||| ||| Sbjct: 16021278 agtttctccatccaaaagagcctctttctactttaagctctatatttctagacattctgg 16021337 Query: 331 tagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgacttgtt 390 ||||||||||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 16021338 tagttcgaccgtgattttttttggtttcggtatctctggaatatgagtgggtgacttgtt 16021397 Query: 391 agaatt-gatcctattgataatacatagaaagggcctgttatctctatcaagatgattct 449 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16021398 agaatttgctcctattgataatacatagaaagggcctgttatctctatcaagatgattct 16021457 Query: 450 aattcgtcagatattatttattctagtatctggaacacgaaatagatagagtggatc 506 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 16021458 aattcgtcggatattatttattctagtatttggaacacgaaatagatagaatggatc 16021514 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 |||||||||||||| | |||||| ||||||| ||||||||||||||| Sbjct: 16021529 aactatgattcatattaactattcagacctcacaaccagactgaaaa 16021575
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 272 bits (137), Expect = 1e-69 Identities = 212/237 (89%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 273 agtttttccatccaaaaaagcct--ttctagtttaagctctacatttctagatattatgg 330 ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| ||| ||| Sbjct: 16015812 agtttctccatccaaaagagcctctttctactttaagctctatatttctagacattctgg 16015871 Query: 331 tagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgacttgtt 390 ||||||||||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 16015872 tagttcgaccgtgattttttttggtttcggtatctctggaatatgagtgggtgacttgtt 16015931 Query: 391 agaatt-gatcctattgataatacatagaaagggcctgttatctctatcaagatgattct 449 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16015932 agaatttgctcctattgataatacatagaaagggcctgttatctctatcaagatgattct 16015991 Query: 450 aattcgtcagatattatttattctagtatctggaacacgaaatagatagagtggatc 506 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 16015992 aattcgtcggatattatttattctagtatttggaacacgaaatagatagaatggatc 16016048 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 518 aactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 |||||||||||||| | |||||| ||||||| ||||||||||||||| Sbjct: 16016063 aactatgattcatattaactattcagacctcacaaccagactgaaaa 16016109
>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154442 Score = 250 bits (126), Expect = 5e-63 Identities = 174/190 (91%) Strand = Plus / Plus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtcgca 159 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 148891 aattcggaatatgggaaagtagctccgggttgggggactactccttttatgggggtcgca 148950 Query: 160 atggctttattcgctatattcctctctatcattttagaaatttataattcttccctttta 219 |||||||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||| Sbjct: 148951 atggctttattcgcggtattcctatctattattttagaaatttataattcttccgtttta 149010 Query: 220 ctggatggaattttaaccaattaggtttctactaactaaaactaggaagtcagagttttt 279 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 149011 ctggacggaattttaatgaattaggtttctactaacgaaaactacgaagtcatagttttt 149070 Query: 280 ccatccaaaa 289 | ||||||| Sbjct: 149071 cattccaaaa 149080
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11 map near 50283S, complete sequence Length = 148306 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 104213 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 104272 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 104273 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 104332 Query: 128 gttgggggactactccttttctgggggtc 156 |||||||||||||||||||| |||||||| Sbjct: 104333 gttgggggactactccttttatgggggtc 104361
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 13971376 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 13971435 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 13971436 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 13971495 Query: 128 gttgggggactactccttttctgggggtc 156 |||||||||||||||||||| |||||||| Sbjct: 13971496 gttgggggactactccttttatgggggtc 13971524
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 ||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| || Sbjct: 14053378 attaaatggaatttatggctacacaaaccgttgaagatagttctagacctggaccaagac 14053437 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||| | | ||||| |||| ||||||||||||||||||||||||||||||| || |||| Sbjct: 14053438 aaactcgcgtaggtaatttattgaaacccttgaattcggaatatgggaaagtagctccgg 14053497 Query: 128 gttgggggactactccttttctgggggtc 156 |||||||||||||||||||| |||||||| Sbjct: 14053498 gttgggggactactccttttatgggggtc 14053526
>gb|DQ069624.1| Yucca schidigera photosystem II phosphoprotein (psbH) gene, partial cds; chloroplast Length = 228 Score = 172 bits (87), Expect = 9e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | |||| |||| || |||| | Sbjct: 6 atttatggctacacaaaccgttgagggtagttctagatctagaccaagacaaactaccgt 65 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| | |||| ||||||| || |||||||||||||| ||||| || ||||| |||||||| Sbjct: 66 agggaatttattgaaaccattaaattcggaatatggtaaagtagctccgggctgggggac 125 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| || || |||| |||||||||||| |||| || |||||||| ||||| ||||| || Sbjct: 126 tacaccacttatgggagtcgcaatggctctatttgcgatattcctatctattattttgga 185 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||||| |||||||||||||||||| Sbjct: 186 aatttataattcttccgttttactggatggaattt 220
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 170 bits (86), Expect = 3e-39 Identities = 191/226 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||||||| || |||||| |||||||| || Sbjct: 76779 atttatggctacacaaaccgttgacgatagttctaaatctgggccaagacgaactgttgt 76838 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76839 aggggatttattgaaaccattgaattcggaatatggtaaagtggctcctgggtggggaac 76898 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| |||| ||||| ||| |||||| || |||||||| | ||| ||||| || Sbjct: 76899 tacacctttaatgggtgtcgcgatgagtttatttgcgatattcctatgtattattttgga 76958 Query: 198 aatttataattcttcccttttactggatggaattttaaccaattag 243 ||||||||||||||| |||||||||| ||||||| || ||||||| Sbjct: 76959 gatttataattcttccattttactggacggaatttcaagcaattag 77004 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgata 409 |||| |||| || ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 77119 tttctgtatttccggaatatgagtgtgtgacttgttagaattgatcctatggata 77173
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 170 bits (86), Expect = 3e-39 Identities = 191/226 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||||||| || |||||| |||||||| || Sbjct: 77014 atttatggctacacaaaccgttgacgatagttctaaatctgggccaagacgaactgttgt 77073 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 77074 aggggatttattgaaaccattgaattcggaatatggtaaagtggctcctgggtggggaac 77133 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| |||| ||||| ||| |||||| || |||||||| | ||| ||||| || Sbjct: 77134 tacacctttaatgggtgtcgcgatgagtttatttgcgatattcctatgtattattttgga 77193 Query: 198 aatttataattcttcccttttactggatggaattttaaccaattag 243 ||||||||||||||| |||||||||| ||||||| || ||||||| Sbjct: 77194 gatttataattcttccattttactggacggaatttcaagcaattag 77239 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgata 409 |||| |||| || ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 77354 tttctgtatttccggaatatgagtgtgtgacttgttagaattgatcctatggata 77408
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 167 bits (84), Expect = 5e-38 Identities = 192/228 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| |||||| || Sbjct: 74313 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgt 74372 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| ||||| || Sbjct: 74373 aggggatttattgaaaccattgaattcagaatatggtaaagtagccccgggatggggaac 74432 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 |||||||||| |||| ||||||||||| |||| || |||||||| | ||| ||||| || Sbjct: 74433 tactccttttatgggagtcgcaatggccctatttgcgatattcctatgtattattttgga 74492 Query: 198 aatttataattcttcccttttactggatggaattttaaccaattaggt 245 ||||||||||||||| |||||||||||||| ||| | | |||||||| Sbjct: 74493 gatttataattcttccgttttactggatggagtttcaccgaattaggt 74540 Score = 103 bits (52), Expect = 7e-19 Identities = 123/146 (84%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 |||||||||| || |||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 74639 gtttcggtatttccggaatatgagtgtgtgacttgttataattgatcttattgatagtac 74698 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| || |||| ||||| || ||||||||||| ||||| || |||| ||||| Sbjct: 74699 agagaatggatctgtcatctcgatagagatgattctatctcgtcgga---tattcattct 74755 Query: 474 agtatctggaacacgaaatagataga 499 |||||||||| |||| |||| ||||| Sbjct: 74756 agtatctggagcacggaatatataga 74781
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 165 bits (83), Expect = 2e-37 Identities = 182/215 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || | |||| |||||||| || Sbjct: 78895 atttatggctacacaaaccgttgagggtagttctagatctggtccaagacgaactgttgt 78954 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| ||| ||||||| ||||||||||||||||| || || ||||| || ||||| || Sbjct: 78955 aggggattttttgaaaccattgaattcggaatatggtaaggtagcccctggatggggaac 79014 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 |||||||| |||| ||||||||||||||||| || |||||| | ||||| ||||| || Sbjct: 79015 gactcctttgatgggtgtcgcaatggctttatttgcgatattcttatctattattttgga 79074 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| |||||||||||||||||| Sbjct: 79075 gatttataattcttccgttttactggatggaattt 79109 Score = 81.8 bits (41), Expect = 2e-12 Identities = 73/86 (84%) Strand = Plus / Plus Query: 329 ggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgacttg 388 ||||||||||||||| || ||||| |||| || ||||||||||||||||||||| Sbjct: 79204 ggtagttcgaccgcgaaatttatttgtttctgtatttccggaatatgagtgtgtgacttg 79263 Query: 389 ttagaattgatcctattgataataca 414 ||| ||||||||||||||||| |||| Sbjct: 79264 ttataattgatcctattgatagtaca 79289
>gb|DQ069619.1| Acorus americanus photosystem II phosphoprotein (psbH) gene, partial cds; chloroplast Length = 219 Score = 157 bits (79), Expect = 5e-35 Identities = 175/207 (84%) Strand = Plus / Plus Query: 22 atggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcaggt 81 |||||||||||||||||||| | |||||||| | || |||||| |||||| || ||| Sbjct: 1 atggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgtaggg 60 Query: 82 agtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactact 141 |||| ||||||| |||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 61 gatttattgaaaccattgaattcagaatatggtaaagtagccccgggatggggaactact 120 Query: 142 ccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaatt 201 |||||| |||| ||||||||||| |||| || |||||||| | ||| ||||| || ||| Sbjct: 121 ccttttatgggagtcgcaatggccctatttgcgatattcctatgtattattttggagatt 180 Query: 202 tataattcttcccttttactggatgga 228 |||||||||||| |||||||||||||| Sbjct: 181 tataattcttccgttttactggatgga 207
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 153 bits (77), Expect = 8e-34 Identities = 167/196 (85%), Gaps = 2/196 (1%) Strand = Plus / Minus Query: 20 ttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcag 79 ||||||||||||||||||||||||||||||||| |||| | |||| ||||||| | | || Sbjct: 186612 ttatggctacacaaaccgttgaagatagttctagaccttgaccaagacgaactcgcgtag 186553 Query: 80 gtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggacta 139 ||| |||| |||||| ||||||||| ||||||||||| || || | ||||||||||| || Sbjct: 186552 gtaatttattgaaactcttgaattcagaatatgggaatgtagctctgggttgggggagta 186493 Query: 140 ctcctttt--ctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| |||| |||||||||||||||||||| || ||||||| ||||| ||||| || Sbjct: 186492 ctcattttaggggggggtcgcaatggctttatacgtggtattcctatctattatttttga 186433 Query: 198 aatttataattcttcc 213 |||||||| ||||||| Sbjct: 186432 aatttatagttcttcc 186417
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 151 bits (76), Expect = 3e-33 Identities = 178/212 (83%) Strand = Plus / Plus Query: 21 tatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcagg 80 ||||||||||||||||||||| |||||||||| | || | |||| || |||| || ||| Sbjct: 72161 tatggctacacaaaccgttgaggatagttctagagctcgtccaagacaaacttctgtagg 72220 Query: 81 tagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactac 140 |||||| ||||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| Sbjct: 72221 gagtttattgaaaccgttgaattcagaatatggtaaagtcgctccggggtggggaactac 72280 Query: 141 tccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaat 200 |||||| |||| | ||||||||| |||| || ||||| || ||||| ||||| ||||| Sbjct: 72281 tcctttgatgggtattgcaatggctctatttgcaatatttctatctattattttggaaat 72340 Query: 201 ttataattcttcccttttactggatggaattt 232 |||||||||||| ||||||| || ||||||| Sbjct: 72341 ttataattcttctattttactagacggaattt 72372 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgata 409 ||||| |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 72497 gtttctgtatttccggaatatgagtgtgtgacttgttagaattgatcctattgata 72552 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 464 tatttattctagtatctggaacacgaaataga 495 ||||||||||||||||||||||||| |||||| Sbjct: 72609 tatttattctagtatctggaacacggaataga 72640
>emb|Y13328.1|PDCPPSBO P.deltoides chloroplast DNA for psbB operon Length = 3637 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||| ||||| | ||||||| | || | |||| ||||||| || Sbjct: 3251 atttatggctacacaaagtgttgaggggagttctagatctggtccaagacgaactattgt 3310 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| ||||||||||||||||| ||||| || ||||| ||||| || Sbjct: 3311 aggggatttattgaaaccattgaattcggaatatggtaaagttgctccggggtggggaac 3370 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| |||||||||||| |||| || ||||||| ||||| ||||| || Sbjct: 3371 tactcctttgatgggtgtcgcaatggctctatttgcggtattcctatctattattttgga 3430 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| |||||||||||||||||| Sbjct: 3431 gatttataattcttccgttttactggatggaattt 3465 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcc 401 |||| |||| ||||||||||||||||| ||||||||| ||| ||||| Sbjct: 3591 tttctgtatttctggaatatgagtgtgcgacttgttataatggatcc 3637
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||| ||||| |||| |||||||| | || |||||| ||||||||| | Sbjct: 76182 atttatggctacaaaaaccattgagagtagttctagatctgggccaagacgaactggcgt 76241 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||||| ||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 76242 agggagtttattgaaaccattgaattcggaatatggaaaagtagctccagggtgggggac 76301 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| || || |||| || ||||||||| |||| || ||||| | ||||| |||||||| Sbjct: 76302 tacaccacttatgggagttgcaatggctctatttgcaatatttttatctattattttaga 76361 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||| || |||||||||||||||||| Sbjct: 76362 aatttataattcatctgttttactggatggaattt 76396 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 368 ggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaaagggcctg 427 |||||||||| ||||||||||||| |||||||||||||||||||||| |||| || || Sbjct: 76599 ggaatatgagcgtgtgacttgttataattgatcctattgataatacaaagaatggatttg 76658 Query: 428 ttatctctatcaagatgattcta 450 | ||||||||||||||||||||| Sbjct: 76659 tcatctctatcaagatgattcta 76681 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcgcaacc 554 |||||||||||||||| | |||| ||||||||||||| Sbjct: 76749 gaactatgattcatacctattattcagacctcgcaacc 76786
>emb|X93203.1|PDPSBTH P.deltoides chloroplast psbT and psbH genes Length = 984 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||| ||||| | ||||||| | || | |||| ||||||| || Sbjct: 598 atttatggctacacaaagtgttgaggggagttctagatctggtccaagacgaactattgt 657 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| ||||||||||||||||| ||||| || ||||| ||||| || Sbjct: 658 aggggatttattgaaaccattgaattcggaatatggtaaagttgctccggggtggggaac 717 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| |||||||||||| |||| || ||||||| ||||| ||||| || Sbjct: 718 tactcctttgatgggtgtcgcaatggctctatttgcggtattcctatctattattttgga 777 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| |||||||||||||||||| Sbjct: 778 gatttataattcttccgttttactggatggaattt 812 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcc 401 |||| |||| ||||||||||||||||| ||||||||| ||| ||||| Sbjct: 938 tttctgtatttctggaatatgagtgtgcgacttgttataatggatcc 984
>gb|DQ069623.1| Typha latifolia photosystem II phosphoprotein (psbH) gene, partial cds; chloroplast Length = 225 Score = 145 bits (73), Expect = 2e-31 Identities = 180/216 (83%), Gaps = 6/216 (2%) Strand = Plus / Plus Query: 22 atggctacacaaaccgttgaagatagttctaaacct------aggccaaaacgaactggt 75 ||||||||||||||||| || |||||||||| | || ||||||| ||||||| | Sbjct: 1 atggctacacaaaccgtagaggatagttctagatctggggcaaggccaagacgaactaat 60 Query: 76 gcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttggggg 135 | ||| |||||| ||||||| |||||||| |||||||| ||||| || ||||| |||||| Sbjct: 61 gtagggagtttattgaaaccattgaattcagaatatggtaaagtagctccgggctggggg 120 Query: 136 actactccttttctgggggtcgcaatggctttattcgctatattcctctctatcatttta 195 ||||| || || |||| |||||||||||| |||| || |||||||| ||||| ||||| Sbjct: 121 actacaccacttatgggagtcgcaatggctctatttgcgatattcctatctattattttg 180 Query: 196 gaaatttataattcttcccttttactggatggaatt 231 ||||||||||| ||||| ||||||||||||||||| Sbjct: 181 gaaatttataactcttctgttttactggatggaatt 216
>gb|AY147508.1| Cartonema philydroides photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2193 Score = 143 bits (72), Expect = 8e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| ||||||||||||||||||| |||| | |||||||| | ||||| Sbjct: 2064 accaatgattaaataagatttatggctacacaaaccattgagggtagttctagatctagg 2123 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||||||||||| ||||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2124 ccaaaacgaactggcgcagggagtttattgaaaccattgaattcggaatatggtaaagtg 2183 Query: 121 gccccggg 128 || ||||| Sbjct: 2184 gctccggg 2191
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 143 bits (72), Expect = 8e-31 Identities = 189/228 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | |||||||| | || |||||| ||| ||| | | Sbjct: 75837 atttatggctacacaaactgttgagggtagttctagatctgggccaagacggactcttac 75896 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 75897 aggggatttattgaaaccattgaattcggaatatggtaaagtggctcctggatggggaac 75956 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 || || ||| |||| ||||||||||||||||| || |||||||| ||||| ||||| || Sbjct: 75957 caccccatttatgggtgtcgcaatggctttatttgccatattcctatctattattttgga 76016 Query: 198 aatttataattcttcccttttactggatggaattttaaccaattaggt 245 ||||||||||||||| |||| |||||||||||| ||| | |||||| Sbjct: 76017 gatttataattcttccgttttgttggatggaatttcaacgagttaggt 76064 Score = 95.6 bits (48), Expect = 2e-16 Identities = 113/137 (82%) Strand = Plus / Plus Query: 328 tggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgactt 387 |||||||||||||| |||| |||||||||| || |||||||||||||||||||| Sbjct: 76137 tggtagttcgaccgtggaattccgttgtttcggtatttccggaatatgagtgtgtgactt 76196 Query: 388 gttagaattgatcctattgataatacatagaaagggcctgttatctctatcaagatgatt 447 |||| ||||||||||||||||| |||| |||| | |||| ||||| || |||||| || Sbjct: 76197 gttataattgatcctattgatagtacagagaatagatctgtcatctcgataaagatggtt 76256 Query: 448 ctaattcgtcagatatt 464 || |||||| |||||| Sbjct: 76257 ctgcttcgtcggatatt 76273
>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence Length = 134155 Score = 141 bits (71), Expect = 3e-30 Identities = 173/207 (83%) Strand = Plus / Minus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||||| | || | |||| |||||||| || Sbjct: 80857 atttatggctacacaaaccgttgaggatagttctagatctggtccaagacgaactgttgt 80798 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| |||||||| |||||||| ||||| || ||||| ||||| || Sbjct: 80797 aggagatttattgaaaccgttgaattcagaatatggtaaagtagctccgggatggggaac 80738 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| |||| | ||||||||| |||| | ||||| |||||||| |||||||| Sbjct: 80737 tacccctttgatgggtattgcaatggctctatttacgatatttctctctattattttaga 80678 Query: 198 aatttataattcttcccttttactgga 224 ||||||||||| ||| |||||||||| Sbjct: 80677 gatttataattcgtccattttactgga 80651 Score = 95.6 bits (48), Expect = 2e-16 Identities = 77/89 (86%) Strand = Plus / Minus Query: 328 tggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgactt 387 |||||||||||||||| || ||||| |||| ||||||||||||||||||||||| Sbjct: 80534 tggtagttcgaccgcgaaacttctttgtttctgtatttctggaatatgagtgtgtgactt 80475 Query: 388 gttagaattgatcctattgataatacata 416 |||| ||||||||||||||||| |||||| Sbjct: 80474 gttacaattgatcctattgatagtacata 80446
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 141 bits (71), Expect = 3e-30 Identities = 179/215 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||| | || | ||||||| ||| || Sbjct: 73140 atttatggctacacaaaccgttgagagtagttctagatctcgtccaaaacctactactgt 73199 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 73200 aggggctttattgaaaccgttgaattcggaatatggtaaagtagctcctgggtggggaac 73259 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| || |||||||||||||| || ||||| | ||||| ||||| || Sbjct: 73260 tactcctttgatgggagttgcaatggctttatttgcagtattcttatctattattttgga 73319 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||| ||| |||||||||||||||||| Sbjct: 73320 aatttataattcgtccgttttactggatggaattt 73354 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataataca 414 |||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 73479 tttctgtatttccggaatatgagtgtgtgacttgttataattgatcctattgataataca 73538
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 141 bits (71), Expect = 3e-30 Identities = 173/207 (83%) Strand = Plus / Minus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||||| | || | |||| |||||||| || Sbjct: 51828 atttatggctacacaaaccgttgaggatagttctagatctggtccaagacgaactgttgt 51769 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| |||||||| |||||||| ||||| || ||||| ||||| || Sbjct: 51768 aggagatttattgaaaccgttgaattcagaatatggtaaagtagctccgggatggggaac 51709 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| |||| | ||||||||| |||| || |||| |||||||| |||||||| Sbjct: 51708 tacccctttgatgggtattgcaatggctctatttgcggtatttctctctattattttaga 51649 Query: 198 aatttataattcttcccttttactgga 224 ||||||||||| ||| |||||||||| Sbjct: 51648 gatttataattcgtccattttactgga 51622 Score = 83.8 bits (42), Expect = 6e-13 Identities = 74/87 (85%) Strand = Plus / Minus Query: 328 tggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgactt 387 |||||||||||||||| || ||||| |||| || |||||||||||||||||||| Sbjct: 51505 tggtagttcgaccgcgaaacttctttgtttctgtatttccggaatatgagtgtgtgactt 51446 Query: 388 gttagaattgatcctattgataataca 414 |||| ||||||||||||||||| |||| Sbjct: 51445 gttacaattgatcctattgatagtaca 51419
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 141 bits (71), Expect = 3e-30 Identities = 179/215 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||| ||||||||||| | |||||||| | || | |||| ||||||| || Sbjct: 79253 atttatggctacgcaaaccgttgagggtagttctagatctggaccaagacgaactattgt 79312 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| |||||||| |||||||| ||||| || || || ||||| || Sbjct: 79313 aggggatttattgaaaccattgaattcagaatatggtaaagtagctcctggatggggaac 79372 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| |||||||||||| |||| || ||||||| ||||| ||||| || Sbjct: 79373 tactcctttgatgggtgtcgcaatggctctatttgcagtattcctatctattattttgga 79432 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| |||||||||| ||||||| Sbjct: 79433 aatttataattcttctgttttactggacggaattt 79467 Score = 71.9 bits (36), Expect = 2e-09 Identities = 116/142 (81%), Gaps = 3/142 (2%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataataca 414 |||| |||| || |||||||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 79598 tttctgtatttccggaatatgagtgtgtgacttgttataattgatactattgatagtaca 79657 Query: 415 tagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattcta 474 | || || |||| |||| ||| ||||| || || ||||| |||||| |||| | Sbjct: 79658 gaaaatggatctgtcatctttatatagatggttttacctcgtcggatattc---attcga 79714 Query: 475 gtatctggaacacgaaatagat 496 ||||||||| |||||||||||| Sbjct: 79715 gtatctggagcacgaaatagat 79736
>gb|AY147514.1| Philydrum lanuginosum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2190 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2061 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagagctagg 2120 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||| |||||||| ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2121 ccaaaatcaactggtgtagggagtttattgaaaccattgaattcggaatatggtaaagta 2180 Query: 121 gccccggg 128 || ||||| Sbjct: 2181 gctccggg 2188
>gb|DQ069622.1| Ranunculus macranthus photosystem II phosphoprotein (psbH) gene, partial cds; chloroplast Length = 234 Score = 133 bits (67), Expect = 7e-28 Identities = 178/215 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||||| |||| | |||||||||| || | |||| | ||||| || Sbjct: 12 atttatggctacacaaaccattgagggtagttctaaatctggtccaagaggaactactgt 71 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 || |||||| ||||||| || |||||||||||||| ||||| || || ||||||||||| Sbjct: 72 ggggagtttattgaaaccgttaaattcggaatatggaaaagtagctcctggttgggggac 131 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| ||||||| |||||||| |||| || ||||| | ||||| ||| | || Sbjct: 132 tacccctttgatgggggttgcaatggcactatttgcagtattcttatctattattctcga 191 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||| ||| |||||||||||||||||| Sbjct: 192 gatttataattcatccgttttactggatggaattt 226
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 133 bits (67), Expect = 7e-28 Identities = 178/215 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| |||||| | ||||||| | || | |||| |||||||| | Sbjct: 77100 atttatggctacacaaactgttgaaaacagttctagatctggtccaagacgaactgcggt 77159 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 77160 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 77219 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| ||||||||||| ||||| || |||| || ||||| ||||| || Sbjct: 77220 tactcctttgatgggtgtcgcaatggccttatttgcggtatttctatctattattttgga 77279 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| ||||| |||||||||||| Sbjct: 77280 gatttataattcttccgttttattggatggaattt 77314 Score = 113 bits (57), Expect = 7e-22 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 77436 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 77495 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| |||| |||| || ||||| ||||| ||||||||| |||||||||| Sbjct: 77496 agagaatgggtctgtcatcttgatagagatggttctacttcgtcaga---tatttattct 77552 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 77553 aatatttggaacacgaaatagat 77575 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 77588 gaactatgattcatacttaatattcagacctcg 77620
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 133 bits (67), Expect = 7e-28 Identities = 178/215 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| |||||| | ||||||| | || | |||| |||||||| | Sbjct: 77098 atttatggctacacaaactgttgaaaacagttctagatctggtccaagacgaactgcggt 77157 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 77158 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 77217 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| ||||||||||| ||||| || |||| || ||||| ||||| || Sbjct: 77218 tactcctttgatgggtgtcgcaatggccttatttgcggtatttctatctattattttgga 77277 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| ||||| |||||||||||| Sbjct: 77278 gatttataattcttccgttttattggatggaattt 77312 Score = 113 bits (57), Expect = 7e-22 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 77434 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 77493 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| |||| |||| || ||||| ||||| ||||||||| |||||||||| Sbjct: 77494 agagaatgggtctgtcatcttgatagagatggttctacttcgtcaga---tatttattct 77550 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 77551 aatatttggaacacgaaatagat 77573 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 77586 gaactatgattcatacttaatattcagacctcg 77618
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 133 bits (67), Expect = 7e-28 Identities = 178/215 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| |||||| | ||||||| | || | |||| |||||||| | Sbjct: 76860 atttatggctacacaaactgttgaaaacagttctagatctggtccaagacgaactgcggt 76919 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76920 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 76979 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| ||||||||||| ||||| || |||| || ||||| ||||| || Sbjct: 76980 tactcctttgatgggtgtcgcaatggccttatttgcggtatttctatctattattttgga 77039 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| ||||| |||||||||||| Sbjct: 77040 gatttataattcttccgttttattggatggaattt 77074 Score = 105 bits (53), Expect = 2e-19 Identities = 118/139 (84%), Gaps = 3/139 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 77196 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 77255 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| |||| |||| || ||||| ||||| ||||||||| |||||||||| Sbjct: 77256 agagaatgggtctgtcatcttgatagagatggttctacttcgtcaga---tatttattct 77312 Query: 474 agtatctggaacacgaaat 492 | ||| ||||||||||||| Sbjct: 77313 aatatttggaacacgaaat 77331 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 77348 gaactatgattcatacttaatattcagacctcg 77380
>gb|AY147524.1| Curculigo capitulata photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2200 Score = 127 bits (64), Expect = 5e-26 Identities = 100/113 (88%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | || || Sbjct: 2071 accaatgattaaataggatttatggctacacaaaccgttgaggatagttctanatctggg 2130 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgg 113 |||| ||||||| || ||| |||||| ||||||| ||||||||||||||||| Sbjct: 2131 ccaanacgaactantgtagggagtttattgaaaccattgaattcggaatatgg 2183
>gb|AY147540.1| Lomandra longifolia photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2199 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 |||||||| |||||||||||||||||||||||| | |||||||| | ||||||||| || Sbjct: 2077 attaaataggatttatggctacacaaaccgttgagggtagttctagagctaggccaagac 2136 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 |||||| | ||| |||||| ||||||| ||||||||||||||||||||||| || |||| Sbjct: 2137 aaactggcgtagggagtttattgaaaccattgaattcggaatatgggaaagtagctccgg 2196 Query: 128 gtt 130 ||| Sbjct: 2197 gtt 2199
>emb|X07106.1|CHSOPSBO Spinach plastid psbB operon with genes for 10 kD phosphoprotein associated with photosystem II (psbH), apocytochrome b6 and subunit 4 (petD) of cytochrome b6f complex Length = 4336 Score = 125 bits (63), Expect = 2e-25 Identities = 177/215 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||| | || | ||||||| ||| || Sbjct: 236 atttatggctacacaaaccgttgagagtagttctagatctcgtccaaaacctactactgt 295 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| ||||||||| ||||||| ||||| || || | ||||| || Sbjct: 296 aggggctttattgaaaccgttgaattcgaaatatggtaaagtagctcctaggtggggaac 355 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| || |||||||||||||| || ||||| | ||||| ||||| || Sbjct: 356 tactcctttgatgggagttgcaatggctttatttgcagtattcttatctattattttgga 415 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||| ||| |||||||||||||||||| Sbjct: 416 aatttataattcgtccgttttactggatggaattt 450 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataataca 414 |||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 575 tttctgtatttccggaatatgagtgtgtgacttgttataattgatcctattgataataca 634
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 125 bits (63), Expect = 2e-25 Identities = 177/215 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | ||||||| | || | |||| |||||||| | Sbjct: 77331 atttatggctacacaaactgttgagaacagttctagatctggtccaagacgaactgcagt 77390 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 77391 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctggatggggaac 77450 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| ||||||||||| ||||| || |||| || ||||| ||||| || Sbjct: 77451 tactcctttgatgggtgtcgcaatggccttatttgcggtatttctatctattattttgga 77510 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| ||||| |||||||||||| Sbjct: 77511 gatttataattcttccgttttattggatggaattt 77545 Score = 97.6 bits (49), Expect = 4e-17 Identities = 120/143 (83%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 77667 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 77726 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| |||| |||| || |||| ||||| ||||||||| ||||| |||| Sbjct: 77727 agagaatgggtctgtcatcttgatagggatggttctacttcgtcaga---tatttcttct 77783 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 77784 aatatttggaacacgaaatagat 77806 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 77819 gaactatgattcatacttaatattcagacctcg 77851
>gb|AF153442.1|AF153442 Pisum sativum chloroplast psbB operon, complete sequence Length = 5662 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| |||||| | ||||| | | || | |||| |||||||| || Sbjct: 2327 atttatggctacacaaactgttgaaaacagttccagatctggtccaagacgaactgctgt 2386 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| |||||||| |||||||| ||||| || ||||| ||||| || Sbjct: 2387 aggagatttattgaaaccattgaattcagaatatggtaaagtagctccggggtggggaac 2446 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| ||||| | |||||||| |||| || |||| |||||||| |||||||| Sbjct: 2447 tacccctttgatggggattgcaatggccctatttgcggtatttctctctattattttaga 2506 Query: 198 aatttataattcttcccttttactgga 224 ||||||||||| |||||||||||||| Sbjct: 2507 gatttataattcgtcccttttactgga 2533 Score = 75.8 bits (38), Expect = 1e-10 Identities = 73/87 (83%) Strand = Plus / Plus Query: 328 tggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgactt 387 |||||||||||||||| || ||||| |||| || |||||||||||||||||||| Sbjct: 2653 tggtagttcgaccgcgaaacttctttgtttctgtatttcgggaatatgagtgtgtgactt 2712 Query: 388 gttagaattgatcctattgataataca 414 |||| ||| ||||||||||||| |||| Sbjct: 2713 gttataatggatcctattgatagtaca 2739 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 464 tatttattctagtatctggaacacgaaata 493 |||||||||||||||||||| |||| |||| Sbjct: 2794 tatttattctagtatctggagcacggaata 2823
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 125 bits (63), Expect = 2e-25 Identities = 177/215 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||| ||||||||||| |||| ||||| | || | |||| |||||||| || Sbjct: 73120 atttatggctacgcaaaccgttgaggataattctagatctggtccaagacgaactgttgt 73179 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| ||||||| || ||||| |||||||| ||||| || ||||| ||||| || Sbjct: 73180 aggggatttattgaaaccattaaattcagaatatggtaaagtagctccggggtggggaac 73239 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| || ||||||||| |||| || ||||| || ||||| ||||| || Sbjct: 73240 tactcctttgatgggtgttgcaatggctctatttgcgatatttctatctattattttgga 73299 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||| ||| ||||||| || ||||||| Sbjct: 73300 gatttataattcgtccattttactcgacggaattt 73334 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcgcaaccagactgaaaa 564 ||||||||||||||||| | |||| ||||||||||||| |||| |||| Sbjct: 73630 gaactatgattcatactaaatatttagacctcgcaaccggacttaaaa 73677 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattga 407 ||||| |||| || |||||||||||||| | |||||| ||| ||||||||||| Sbjct: 73463 gtttctgtatttccggaatatgagtgtgcggcttgttttaatggatcctattga 73516
>gb|AY147542.1| Muilla maritima photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2212 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2083 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2142 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| | ||| |||||||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 2143 ccaagaaaaacaggtgcagggagtttattgaaaccattaaattcggaatatggtaaagta 2202 Query: 121 gccccggg 128 || ||||| Sbjct: 2203 gctccggg 2210
>gb|AY147538.1| Asparagus officinalis photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2199 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2070 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2129 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | | ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2130 ccaagacaaactagcgtagggagtttattgaaaccattgaattcggaatatggtaaagta 2189 Query: 121 gccccggg 128 || ||||| Sbjct: 2190 gctccggg 2197
>gb|AY147534.1| Xanthorrhoea resinosa photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2207 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2078 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagaactagg 2137 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||||| ||||| | ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2138 tcaaaaccaactgccgtagggagtttattgaaaccattgaattcggaatatggtaaagta 2197 Query: 121 gccccggg 128 || ||||| Sbjct: 2198 gctccggg 2205
>gb|AY147530.1| Lanaria lanata photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2201 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | || || Sbjct: 2072 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctggg 2131 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| ||||||| || ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2132 ccaagacgaactactgtagggagtttattgaaaccgttgaattcggaatatggtaaagta 2191 Query: 121 gccccggg 128 || ||||| Sbjct: 2192 gctccggg 2199
>gb|AY147520.1| Asphodelus albus photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2217 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||| Sbjct: 2088 accaatgattaaatagaatttatggctacacaaaccgttgaggatagttctagagctaca 2147 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 ||||| | |||||| ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2148 ccaaagcaaactggcctaggaagtttattgaaaccattgaattcggaatatggtaaagta 2207 Query: 121 gccccggg 128 || ||||| Sbjct: 2208 gctccggg 2215
>gb|AY297608.1| Wollastonia biflora psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exons 1, 2 and partial cds; chloroplast Length = 1005 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 75 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 134 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 135 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 194 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 195 tggttctccttcgtcgga---tatttattctagtatctggaacacggaata 242
>gb|AY297607.1| Wamalchitamia aurantiaca psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exon 1 and partial cds; chloroplast Length = 801 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 75 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 134 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 135 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 194 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 195 tggttctccttcgtcgga---tatttattctagtatctggaacacggaata 242
>gb|AY297606.1| Otopappus epaleaceus psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exons 1, 2 and partial cds; chloroplast Length = 976 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 75 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 134 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 135 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 194 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 195 tgtttctccttcgtcgga---tatttattctagtatctggaacacggaata 242
>gb|AY297605.1| Jefea pringlei psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exons 1, 2 and partial cds; chloroplast Length = 1008 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 75 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 134 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 135 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 194 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 195 tggttctccttcgtcgga---tatttattctagtatctggaacacggaata 242
>gb|AY297604.1| Elaphandra paucipunctata psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exons 1, 2 and partial cds; chloroplast Length = 917 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 64 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 123 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 124 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 183 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 184 tggttctccttcgtcgga---tatttattctagtatctggaacacggaata 231
>gb|AY297603.1| Dimerostemma brasilianum psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exons 1, 2 and partial cds; chloroplast Length = 979 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 76 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 135 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 136 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 195 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 196 tggttctctttcgtcgga---tatttattctagtatctggaacacggaata 243
>gb|AY297602.1| Dimerostemma annuum psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exon 1 and partial cds; chloroplast Length = 848 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 76 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 135 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 136 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 195 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 196 tggttctctttcgtcgga---tatttattctagtatctggaacacggaata 243
>gb|AY297601.1| Blainvillea rhomboidea psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exons 1, 2 and partial cds; chloroplast Length = 989 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 75 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 134 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 135 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 194 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||||||||||||||||||||||| |||| Sbjct: 195 tggttctccttcgtcgga---tatttattctagtatctggaacacggaata 242
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 74789 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 74848 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 74849 gacttgttataattgatcctattgatattacagagaatgggtctgtcatcttgatagaga 74908 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || ||||| |||||| || |||||||| |||||||||||||||| |||| Sbjct: 74909 tggttctacttcgtcgga---tatttattatagtatctggaacacggaata 74956 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 91 aaacccttgaattcggaatatgggaaagtcgccccgggttgggggactactccttttctg 150 ||||| ||||||||||||||||| ||||| || || || ||||| || || ||||| || Sbjct: 74562 aaaccattgaattcggaatatggtaaagtagctcctgggtggggaacgacccctttgatg 74621 Query: 151 ggggtcgcaatggctttattcgctatattcctctctatcattttagaaatttataattct 210 || |||||||||||| |||| || |||| || ||||| ||||| || |||||||||||| Sbjct: 74622 ggtgtcgcaatggctctatttgcggtatttctatctattattttggagatttataattct 74681 Query: 211 tcccttttactggatggaattt 232 ||| ||||| |||||||||||| Sbjct: 74682 tccgttttattggatggaattt 74703
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| ||||||||||||||||||| ||||| |||| || ||||||||||||||| Sbjct: 79767 tattttggtagttcgaccgcggaatttctttgtttctgtatttccggaatatgagtgtgt 79826 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 |||||||||||||||||||||||| || |||| |||| ||| |||| |||| || ||| Sbjct: 79827 gacttgttagaattgatcctattggtagtacagagaatgggtctgtcatcttgatagaga 79886 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 |||||||| |||||| || |||| ||||||||||||| |||||| |||| Sbjct: 79887 tgattctacttcgtcgga---tattcattctagtatctgaaacacggaata 79934 Score = 117 bits (59), Expect = 4e-23 Identities = 176/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||| |||||||||| | |||||||| | || | ||||||| |||| || Sbjct: 79473 atttatggctacaaaaaccgttgagggtagttctagatctcgtccaaaaccaactactgt 79532 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| ||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 79533 aggggagttattaaaaccgttgaattcggaatatggtaaagtagctcctggatggggaac 79592 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| |||||||||||| |||| || ||||||| ||||| ||||| || Sbjct: 79593 tactcctttaatgggtgtcgcaatggctctatttgcggtattcctatctattattttgga 79652 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| ||||| |||| ||||||| Sbjct: 79653 gatttataattcttctgttttattggacggaattt 79687 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcgcaa 552 ||||||||||||||||| | |||| ||||||||||| Sbjct: 79961 gaactatgattcatacttaatattcagacctcgcaa 79996
>gb|S67282.1|S67282S1 Zea mays psbB operon operon, partial sequence; chloroplast Length = 136 Score = 119 bits (60), Expect = 1e-23 Identities = 118/137 (86%), Gaps = 2/137 (1%) Strand = Plus / Plus Query: 253 aactaaaactaggaagtcagagtttttccatccaaaaaa-gcctttctagtttaagctct 311 ||||||||||| || ||| ||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1 aactaaaactatgacttcatagtttttccatccaaaaaaagcctttctactttaagctcc 60 Query: 312 acatttctagatattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaa 371 ||||||||||| ||| |||||||||||||| || | |||| ||||||||||||| Sbjct: 61 acatttctagacattctggtagttcgaccgtgg-atttttttgttttggtatctctggaa 119 Query: 372 tatgagtgtgtgacttg 388 ||||||||||||||||| Sbjct: 120 tatgagtgtgtgacttg 136
>gb|AY007465.2| Lilium superbum photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2195 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 |||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2068 accaatcattaaataagatttatggctacacaaaccgttgaggatagttctaaatctagg 2127 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2128 ccaagacaaactaatataggaagtttattgaaaccattgaattcggaatatggtaaagta 2187 Query: 121 gccccggg 128 || ||||| Sbjct: 2188 gctccggg 2195
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 119 bits (60), Expect = 1e-23 Identities = 142/171 (83%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 74787 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 74846 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 74847 gacttgttataattgatcctattgatattacagagaatgggtctgtcatcttgatagaga 74906 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || ||||| |||||| || |||||||| |||||||||||||||| |||| Sbjct: 74907 tggttctacttcgtcgga---tatttattatagtatctggaacacggaata 74954 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 91 aaacccttgaattcggaatatgggaaagtcgccccgggttgggggactactccttttctg 150 ||||| ||||||||||||||||| ||||| || || || ||||| || || ||||| || Sbjct: 74560 aaaccattgaattcggaatatggtaaagtagctcctgggtggggaacgacccctttgatg 74619 Query: 151 ggggtcgcaatggctttattcgctatattcctctctatcattttagaaatttataattct 210 || |||||||||||| |||| || |||| || ||||| ||||| || |||||||||||| Sbjct: 74620 ggtgtcgcaatggctctatttgcggtatttctatctattattttggagatttataattct 74679 Query: 211 tcccttttactggatggaattt 232 ||| ||||| |||||||||||| Sbjct: 74680 tccgttttattggatggaattt 74701
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 117 bits (59), Expect = 4e-23 Identities = 176/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| || || | |||||||| || | |||| ||||||| || Sbjct: 73908 atttatggctacacaaactgtcgagaacggttctaaatctggtccaagacgaactactgt 73967 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| | |||| | |||||||||||||| |||||||| ||||| || ||||| ||||| || Sbjct: 73968 agggaatttattaaaacccttgaattctgaatatggtaaagtagctccggggtggggaac 74027 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 || ||||| |||| |||||||||||| |||| || |||| || ||||| |||||||| Sbjct: 74028 gacccctttgatgggcgtcgcaatggctctatttgcggtatttctatctattattttaga 74087 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| ||||| |||||||||||| Sbjct: 74088 gatttataattcttctgttttattggatggaattt 74122 Score = 103 bits (52), Expect = 7e-19 Identities = 140/171 (81%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 74208 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 74267 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||| ||| |||| |||| ||| |||| |||| || ||| Sbjct: 74268 gacttgttataattgatcctattaatagtacagagaatgggtctgtcatcttgatagaga 74327 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || ||||| ||||||||||||||||||| |||| Sbjct: 74328 tggttctccttcgtcgga---tattttttctagtatctggaacacggaata 74375 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcgcaaccagact 559 ||||||||||||||||| | |||| | ||||||| |||||||| Sbjct: 74400 gaactatgattcatacttaatattcaaacctcgcgaccagact 74442
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 117 bits (59), Expect = 4e-23 Identities = 176/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||||| |||| | |||||| | | || |||||| ||| ||| || Sbjct: 80272 atttatggctacacaaaccattgagggtagttccagatctgggccaagacggactattgt 80331 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| ||||| || ||||| || Sbjct: 80332 aggcgatttattaaaaccattgaattcggaatatggtaaagtagcccccggatggggaac 80391 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| || || |||| |||||||||||| |||| || ||||||| ||||| ||||| || Sbjct: 80392 tacaccccttatgggtgtcgcaatggctctatttgcagtattcctatctattattttgga 80451 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| ||||||| ||||| |||| Sbjct: 80452 gatttataattcttccgttttactagatggtattt 80486 Score = 69.9 bits (35), Expect = 9e-09 Identities = 55/64 (85%) Strand = Plus / Plus Query: 328 tggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgtgactt 387 ||||||||||||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 80581 tggtagttcgaccgcggaattcttttgtttcggtatttccggaatatgagtgtgtgactt 80640 Query: 388 gtta 391 |||| Sbjct: 80641 gtta 80644
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 117 bits (59), Expect = 4e-23 Identities = 125/147 (85%) Strand = Plus / Plus Query: 84 tttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactactcc 143 |||| ||||||| |||||||| |||||||| ||||| || || || ||||| ||||| || Sbjct: 81189 tttattgaaaccgttgaattcagaatatggtaaagtagctcctggatggggaactacccc 81248 Query: 144 ttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaattta 203 ||| ||||||||||||||||| |||| || ||||| || || || ||||| || ||||| Sbjct: 81249 ctttatgggggtcgcaatggctctatttgcaatatttctatcaattattttggagattta 81308 Query: 204 taattcttcccttttactggatggaat 230 |||||||||| |||||||||||||||| Sbjct: 81309 taattcttccgttttactggatggaat 81335 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattg 406 |||||||||| || |||||||||||||||||||||||| |||||||||||||| Sbjct: 81444 gtttcggtatttccggaatatgagtgtgtgacttgttataattgatcctattg 81496
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 117 bits (59), Expect = 4e-23 Identities = 176/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | |||||| | || | ||||||| |||| || Sbjct: 76519 atttatggctacacaaactgttgagaacggttctagatctcgtccaaaaccaactactgt 76578 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| | |||| ||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76579 agggaatttattgaaaccattgaattcggaatatggtaaagtagctcctggatggggaac 76638 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 |||||||| |||| ||||||||||| |||| || ||||| || ||||| ||||| || Sbjct: 76639 gactcctttgatgggtgtcgcaatggccctatttgcgatatttctatctattattttgga 76698 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||||||| ||||| |||||| ||||| Sbjct: 76699 gatttataattcttccgttttattggatgaaattt 76733 Score = 103 bits (52), Expect = 7e-19 Identities = 140/171 (81%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| ||||||||||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 76826 tattttggtagttcgaccgcggaatttctttgtttctgtatttctggaatatgagtgtgt 76885 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| ||| ||| |||| |||| || || Sbjct: 76886 gacttgttataattgatcctattgatagtacagtgaacgggtctgtcatcttgatagagg 76945 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || ||||| | |||| || |||||||||||||||| |||||||| |||| Sbjct: 76946 tggttctactccgtcgga---tatttattctagtatccggaacacggaata 76993 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcgc 550 ||||||||||||||||| | |||| ||||||||| Sbjct: 77018 gaactatgattcatacttaatattcagacctcgc 77051
>gb|AY297598.1| Angelphytum bahiense psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exons 1, 2 and partial cds; chloroplast Length = 961 Score = 115 bits (58), Expect = 2e-22 Identities = 120/140 (85%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 107 gtttctgtatttctggaatatgagtgtgtgacttgttataattgatcctattgatagtac 166 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| |||| |||| || ||||| |||| |||||| || |||||||||| Sbjct: 167 agagaatgggtctgtcatcttgatagagatggttctctttcgtcgga---tatttattct 223 Query: 474 agtatctggaacacgaaata 493 ||||||||||||||| |||| Sbjct: 224 agtatctggaacacggaata 243
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 113 bits (57), Expect = 7e-22 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 76663 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 76722 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| ||||||||| || ||||| ||||| ||||||||| ||||||||| Sbjct: 76723 agagaatgggtctgttatcttgatagagatggttctacttcgtcaga---tatttattcg 76779 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 76780 aatatttggaacacgaaatagat 76802 Score = 109 bits (55), Expect = 1e-20 Identities = 175/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | ||||||| | || | |||| |||||||| | Sbjct: 76327 atttatggctacacaaactgttgagaacagttctagatctggtccaagacgaactgcagt 76386 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76387 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 76446 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| ||||||||||| ||||| || |||| || ||||| ||||| || Sbjct: 76447 tactcctttgatgggtgtcgcaatggccttatttgcggtatttctatctattattttgga 76506 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 76507 gatttataattcttctgttttattggatgggattt 76541 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 76815 gaactatgattcatacttaatattcagacctcg 76847
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 113 bits (57), Expect = 7e-22 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 76826 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 76885 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| ||||||||| || ||||| ||||| ||||||||| ||||||||| Sbjct: 76886 agagaatgggtctgttatcttgatagagatggttctacttcgtcaga---tatttattcg 76942 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 76943 aatatttggaacacgaaatagat 76965 Score = 109 bits (55), Expect = 1e-20 Identities = 175/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | ||||||| | || | |||| |||||||| | Sbjct: 76490 atttatggctacacaaactgttgagaacagttctagatctggtccaagacgaactgcagt 76549 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76550 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 76609 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| |||| ||||||||||||||||| || |||| || ||||| ||||| || Sbjct: 76610 tacccctttgatgggtgtcgcaatggctttatttgcggtatttctatctattattttgga 76669 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 76670 gatttataattcttctgttttattggatgggattt 76704 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 76978 gaactatgattcatacttaatattcagacctcg 77010
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 113 bits (57), Expect = 7e-22 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 76823 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 76882 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| ||||||||| || ||||| ||||| ||||||||| ||||||||| Sbjct: 76883 agagaatgggtctgttatcttgatagagatggttctacttcgtcaga---tatttattcg 76939 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 76940 aatatttggaacacgaaatagat 76962 Score = 109 bits (55), Expect = 1e-20 Identities = 175/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | ||||||| | || | |||| |||||||| | Sbjct: 76487 atttatggctacacaaactgttgagaacagttctagatctggtccaagacgaactgcagt 76546 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76547 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 76606 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||| ||||| |||| ||||||||||||||||| || |||| || ||||| ||||| || Sbjct: 76607 tacccctttgatgggtgtcgcaatggctttatttgcggtatttctatctattattttgga 76666 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 76667 gatttataattcttctgttttattggatgggattt 76701 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 76975 gaactatgattcatacttaatattcagacctcg 77007
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 113 bits (57), Expect = 7e-22 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 76729 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 76788 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| ||||||||| || ||||| ||||| ||||||||| ||||||||| Sbjct: 76789 agagaatgggtctgttatcttgatagagatggttctacttcgtcaga---tatttattcg 76845 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 76846 aatatttggaacacgaaatagat 76868 Score = 109 bits (55), Expect = 1e-20 Identities = 175/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | ||||||| | || | |||| |||||||| | Sbjct: 76393 atttatggctacacaaactgttgagaacagttctagatctggtccaagacgaactgcagt 76452 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76453 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 76512 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| ||||||||||| ||||| || |||| || ||||| ||||| || Sbjct: 76513 tactcctttgatgggtgtcgcaatggccttatttgcggtatttctatctattattttgga 76572 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 76573 gatttataattcttctgttttattggatgggattt 76607 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 76881 gaactatgattcatacttaatattcagacctcg 76913
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 113 bits (57), Expect = 7e-22 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 76674 gtttctgtatttccggagtatgagtgtgtgacttgttataattgatcctattgatagtac 76733 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| ||||||||| || ||||| ||||| ||||||||| ||||||||| Sbjct: 76734 agagaatgggtctgttatcttgatagagatggttctacttcgtcaga---tatttattcg 76790 Query: 474 agtatctggaacacgaaatagat 496 | ||| ||||||||||||||||| Sbjct: 76791 aatatttggaacacgaaatagat 76813 Score = 109 bits (55), Expect = 1e-20 Identities = 175/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | ||||||| | || | |||| |||||||| | Sbjct: 76338 atttatggctacacaaactgttgagaacagttctagatctggtccaagacgaactgcagt 76397 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| |||| | ||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 76398 aggagatttattaaaaccattgaattcggaatatggtaaagtagctcctgggtggggaac 76457 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 ||||||||| |||| ||||||||||| ||||| || |||| || ||||| ||||| || Sbjct: 76458 tactcctttgatgggtgtcgcaatggccttatttgcggtatttctatctattattttgga 76517 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 76518 gatttataattcttctgttttattggatgggattt 76552 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 gaactatgattcatactcactattaagacctcg 549 ||||||||||||||||| | |||| |||||||| Sbjct: 76826 gaactatgattcatacttaatattcagacctcg 76858
>gb|AY147533.1| Sisyrinchium montanum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2138 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2009 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2068 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| |||||| | |||| ||||||| |||||||| |||||||| ||||| Sbjct: 2069 ccaagacaaactaatgcagggaatttattgaaaccattgaattcagaatatggtaaagta 2128 Query: 121 gccccggg 128 || ||||| Sbjct: 2129 gctccggg 2136
>gb|AY147532.1| Phormium tenax photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2225 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | ||| |||| | ||||| Sbjct: 2096 accaatgattaaataagatttatggctacacaaaccgttgagggtagctctagagctagg 2155 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 ||||||| |||| | ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2156 ccaaaaccaactaccgtagggagtttattgaaaccattgaattcggaatatggtaaagta 2215 Query: 121 gccccggg 128 || ||||| Sbjct: 2216 gctccggg 2223
>gb|AY297600.1| Baltimora recta psbH-petB intergenic spacer and PetB-like (petB) gene, partial sequence; chloroplast Length = 1002 Score = 111 bits (56), Expect = 3e-21 Identities = 141/171 (82%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 323 tattatggtagttcgaccgcggaannnnnnngtttcggtatctctggaatatgagtgtgt 382 |||| |||||||||||||| |||| ||||| |||| |||||||||||||||||| Sbjct: 75 tattttggtagttcgaccgtggaatttctttgtttctgtatttctggaatatgagtgtgt 134 Query: 383 gacttgttagaattgatcctattgataatacatagaaagggcctgttatctctatcaaga 442 ||||||||| ||||||||||||||||| |||| |||| ||| |||| |||| || ||| Sbjct: 135 gacttgttataattgatcctattgatagtacagagaatgggtctgtcatcttgatagaga 194 Query: 443 tgattctaattcgtcagatattatttattctagtatctggaacacgaaata 493 || |||| |||||| || |||||||| |||||||||||||||| |||| Sbjct: 195 tggttctccttcgtcgga---tatttattttagtatctggaacacgtaata 242
>gb|AY147521.1| Astelia alpina photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2203 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 |||||| |||||||| |||||||||||||||||||||||| | |||||||| | || || Sbjct: 2074 accaatcattaaataggatttatggctacacaaaccgttgagggtagttctagatctggg 2133 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagt 119 |||| ||||||| || ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2134 ccaagacgaactactgtagggagtttattgaaaccattgaattcggaatatggtaaagt 2192
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 109 bits (55), Expect = 1e-20 Identities = 175/215 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| |||||||||||||||| | || | |||| | | ||| || Sbjct: 74481 atttatggctacacaaactgttgaagatagttctagatctggtccaagaagcactactgt 74540 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| | ||| ||||||| |||||||| |||||||| ||||| || || || ||||| || Sbjct: 74541 agggaagttattgaaaccattgaattccgaatatggtaaagtagctcccggatggggaac 74600 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 || ||||| |||| || ||||||||| |||| || ||||||| ||||| ||||| || Sbjct: 74601 gacccctttgatgggtgttgcaatggctctatttgcggtattcctatctattattttgga 74660 Query: 198 aatttataattcttcccttttactggatggaattt 232 |||||||||||||| || ||||||||||||||| Sbjct: 74661 gatttataattcttctgttctactggatggaattt 74695 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/130 (85%), Gaps = 4/130 (3%) Strand = Plus / Plus Query: 368 ggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa-agggcct 426 ||||||||||||||||||||||||||||||| ||||| |||| |||| |||| ||| || Sbjct: 74836 ggaatatgagtgtgtgacttgttagaattgaccctatggatagtacagagaatggggtct 74895 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 || |||| |||||||||| || || |||||| || |||| |||| |||||||||| || Sbjct: 74896 gtcatctttatcaagatggttttacttcgtcgga---tattcattcgagtatctggagca 74952 Query: 487 cgaaatagat 496 |||||||||| Sbjct: 74953 cgaaatagat 74962
>gb|AY297599.1| Angelphytum matogrossense psbH-petB intergenic spacer, partial sequence; and PetB (petB) gene, exon 1 and partial cds; chloroplast Length = 824 Score = 107 bits (54), Expect = 4e-20 Identities = 119/140 (85%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 354 gtttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataatac 413 ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 107 gtttctgtatttctggaatatgagtgtgtgacttgttataattgatcctattgatagtac 166 Query: 414 atagaaagggcctgttatctctatcaagatgattctaattcgtcagatattatttattct 473 | |||| ||| |||| |||| || ||||| |||| |||| | || |||||||||| Sbjct: 167 agagaatgggtctgtcatcttgatagagatggttctctttcggcgga---tatttattct 223 Query: 474 agtatctggaacacgaaata 493 ||||||||||||||| |||| Sbjct: 224 agtatctggaacacggaata 243
>gb|AY147510.1| Ensete ventricosum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2170 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 2066 accaatgattaaataggatttatggctacacaaaccgttgaggatagttctagatctagg 2125 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcg 105 |||| || |||| || ||| |||||| ||||||| ||||||||| Sbjct: 2126 ccaagacaaactactgtagggagtttattgaaaccattgaattcg 2170
>gb|DQ384532.1| Panax ginseng clone PG6L-8 PSII phosphoprotein mRNA, complete cds Length = 313 Score = 105 bits (53), Expect = 2e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 84 tttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactactcc 143 |||| ||||||| ||||||||||||||||| ||||| || || || ||||| || ||||| Sbjct: 105 tttattgaaaccattgaattcggaatatggtaaagtagctcctggatggggaacgactcc 164 Query: 144 ttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaattta 203 ||| |||| ||||||||||| |||| || ||||| || ||||| ||||| || ||||| Sbjct: 165 tttgatgggtgtcgcaatggccctatttgcgatatttctatctattattttggagattta 224 Query: 204 taattcttcccttttactggatggaattt 232 |||||||||| ||||| |||||| ||||| Sbjct: 225 taattcttccgttttattggatgaaattt 253
>gb|AY147541.1| Smilacina racemosa photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2196 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2067 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2126 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | ||| | |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2127 ccaagacaaactaccgtagggaatttattgaaaccattgaattcggaatatggtaaagta 2186 Query: 121 gccccggg 128 || ||||| Sbjct: 2187 gctccggg 2194
>gb|AY147536.1| Allium textile photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2224 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 |||||| |||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2095 accaataattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2154 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2155 ccaagacaaactaccgtagggagtttattgaaaccgttgaattcggaatatggtaaagta 2214 Query: 121 gccccggg 128 || ||||| Sbjct: 2215 gctccggg 2222
>gb|AY147535.1| Xeronema callistemon photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2129 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2000 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2059 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | ||| | |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2060 ccaagacaaactaccgtagggaatttattgaaaccattgaattcggaatatggtaaagta 2119 Query: 121 gccccggg 128 || ||||| Sbjct: 2120 gctccggg 2127
>gb|AY147528.1| Iris missouriensis photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2211 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| ||||||||| |||||||||||||| | |||||||| | ||||| Sbjct: 2082 accaatgattaaataggatttatggcgacacaaaccgttgagggtagttctagatctagg 2141 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2142 ccaagacaaactaacgtagggagtttattgaaaccattgaattcggaatatggtaaagta 2201 Query: 121 gccccggg 128 || ||||| Sbjct: 2202 gctccggg 2209
>gb|AY147527.1| Hemerocallis littorea photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2204 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | ||| |||| | ||| | Sbjct: 2075 accaatgattaaataagatttatggctacacaaaccgttgagggtagctctagagctaag 2134 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 ||||||| ||||| | ||| |||||| ||||||| |||||||| |||||||| ||||| Sbjct: 2135 ccaaaaccaactgccgtagggagtttattgaaaccattgaattcagaatatggtaaagta 2194 Query: 121 gccccggg 128 || ||||| Sbjct: 2195 gctccggg 2202
>gb|AY147522.1| Blandfordia punicea photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2195 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | || | Sbjct: 2066 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctgga 2125 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| ||||||| || ||| | |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2126 ccaagacgaactactgtagggaatttattgaaaccattgaattcggaatatggtaaagtg 2185 Query: 121 gccccggg 128 || ||||| Sbjct: 2186 gctccggg 2193
>gb|DQ069621.1| Nuphar advena photosystem II phosphoprotein (psbH) gene, partial cds; chloroplast Length = 219 Score = 101 bits (51), Expect = 3e-18 Identities = 171/211 (81%) Strand = Plus / Plus Query: 22 atggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcaggt 81 ||||||||||||||| |||| | |||||| | | || |||||| ||||||| | ||| Sbjct: 1 atggctacacaaaccattgagggtagttccagatctgggccaagacgaactattataggc 60 Query: 82 agtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactact 141 |||| | ||||| ||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 61 gatttattaaaaccattgaattcggaatatggtaaagtagctcctggatggggaactaca 120 Query: 142 ccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaatt 201 || ||| |||| |||||||||||| |||| || ||||||| ||||| ||||| || ||| Sbjct: 121 ccctttatgggtgtcgcaatggctctatttgcagtattcctatctattattttggagatt 180 Query: 202 tataattcttcccttttactggatggaattt 232 ||||| ||||| ||||||||||||| |||| Sbjct: 181 tataactcttctgttttactggatgggattt 211
>gb|AY007461.1| Chloranthus japonicus photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2196 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||||| |||| |||||||||| | || |||||| ||||||| | | Sbjct: 2084 atttatggctacacaaaccattgaggatagttctagatctgggccaagacgaactactac 2143 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2144 agggagtttattgaaaccattgaattcggaatatggtaaagt 2185
>gb|AY007459.1| Ascarina lucida photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2199 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||||| |||| |||||||||| | || |||||| ||||||| | | Sbjct: 2087 atttatggctacacaaaccattgaggatagttctagatctgggccaagacgaactamtac 2146 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2147 agggagtttattgaaaccattgaattcggaatatggtaaagt 2188
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| || Sbjct: 101548 attaaatagaatttatggctacacaaaccgttgaagatagttctagacctagaccaagac 101489 Query: 68 gaact 72 ||||| Sbjct: 101488 gaact 101484
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| || Sbjct: 43268 attaaatagaatttatggctacacaaaccgttgaagatagttctagacctagaccaagac 43209 Query: 68 gaact 72 ||||| Sbjct: 43208 gaact 43204
>gb|AY147539.1| Chlorophytum comosum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2202 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | |||| Sbjct: 2073 accaatgattaaataagatttatggctacacaaaccgttgagggtagttctagatctaga 2132 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | ||| | |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2133 ccaagacaaactaccgtagggaatttattgaaaccattgaattcggaatatggtaaagta 2192 Query: 121 gccccggg 128 || ||||| Sbjct: 2193 gctccggg 2200
>gb|AY147507.1| Ananas comosus photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2193 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 9 ttaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacg 68 ||||||| |||||||||||||||||||||||| |||||||||| | || |||||| ||| Sbjct: 2072 ttaaataggatttatggctacacaaaccgttgaggatagttctagatctgggccaagacg 2131 Query: 69 aactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 |||| || ||| |||| ||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 2132 aactactgtaggggatttattgaaaccattgaattcggaatatggtaaagtagctccggg 2191
>gb|AY147505.1| Stemona tuberosa photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2182 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||| |||||||| |||||| | |||||||| | || | Sbjct: 2053 accaatgattaaataagatttatggttacacaaagcgttgagggtagttctagatctggt 2112 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 ||| ||||||| ||||||| ||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2113 tcaagacgaactagtgcagggggtttattgaaaccattgaattcggaatatggtaaagta 2172 Query: 121 gccccggg 128 || ||||| Sbjct: 2173 gctccggg 2180
>gb|AF528914.1| Tasmannia lanceolata photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2208 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||||| |||| | |||||||| | ||||||||| ||||||| | | Sbjct: 2096 atttatggctacacaaaccattgagggtagttctagatctaggccaagacgaactattac 2155 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgcccc 125 ||| | |||| ||||||| ||||||||||||||||| ||||| ||||| Sbjct: 2156 agggaatttattgaaaccattgaattcggaatatggtaaagtagcccc 2203
>gb|AF528907.1| Piper betle photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2206 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||| ||| || |||||| |||||||| | Sbjct: 2094 atttatggctacacaaaccgttgaggatagttccaaatctgggccaagacgaactgttat 2153 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgcccc 125 ||| |||| ||||||| ||||||||||||||||| ||||| ||||| Sbjct: 2154 aggggatttattgaaacctttgaattcggaatatggtaaagtagcccc 2201
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/130 (85%), Gaps = 4/130 (3%) Strand = Plus / Plus Query: 368 ggaatatgagtgtgtgacttgttagaattgatcctattgataatacatagaa-agggcct 426 ||||||||||||||||||||||||||||||| ||||| |||| |||| |||| ||| || Sbjct: 73942 ggaatatgagtgtgtgacttgttagaattgaccctatggatagtacagagaagggggtct 74001 Query: 427 gttatctctatcaagatgattctaattcgtcagatattatttattctagtatctggaaca 486 || |||| |||||||||| || || |||||| || |||| |||| |||||||||| || Sbjct: 74002 gtcatctttatcaagatggttttatttcgtcgga---tattcattcgagtatctggagca 74058 Query: 487 cgaaatagat 496 |||||||||| Sbjct: 74059 cgaaatagat 74068 Score = 93.7 bits (47), Expect = 6e-16 Identities = 173/215 (80%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| |||||||||||||||| | || | |||| | | ||| || Sbjct: 73587 atttatggctacacaaactgttgaagatagttctagatctggtccaagaagcactactgt 73646 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggac 137 ||| | ||| ||||||| |||||||| |||||||| ||||| || || || ||||| || Sbjct: 73647 agggaagttattgaaaccgttgaattctgaatatggtaaagtagctcctggatggggaac 73706 Query: 138 tactccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttaga 197 || ||||| |||| || |||||||| |||| || ||||||| ||||| ||||| || Sbjct: 73707 gacccctttgatgggtgttgcaatggcactatttgcggtattcctatctattattttgga 73766 Query: 198 aatttataattcttcccttttactggatggaattt 232 ||||||||||| || || ||||||||||||||| Sbjct: 73767 gatttataattcctctgttctactggatggaattt 73801
>gb|AY147519.1| Alania endlicheri photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2190 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||| ||||||||| |||||||||||||||||||||||| | |||||||| | || || Sbjct: 2061 accaacgattaaataggatttatggctacacaaaccgttgagggtagttctagatctggg 2120 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagt 119 |||| ||||||| | ||| | |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2121 ccaagacgaactaccgtagggaatttattgaaaccattgaattcggaatatggtaaagt 2179
>gb|AY007464.1| Hydrastis canadensis photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2196 Score = 93.7 bits (47), Expect = 6e-16 Identities = 88/102 (86%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || | |||| ||||||| || Sbjct: 2094 atttatggctacacaaaccgttgagggtagttctagatctggtccaagacgaactantgt 2153 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| | |||| ||||||| ||||||||||||||||||||||| Sbjct: 2154 agggaatttattgaaaccattgaattcggaatatgggaaagt 2195
>gb|AY147525.1| Cyanastrum cordifolium photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2185 Score = 91.7 bits (46), Expect = 3e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | |||| Sbjct: 2081 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatntagg 2140 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcg 105 |||| || |||| || ||| |||||| ||||||| ||||||||| Sbjct: 2141 ccaagacaaactactgtagggagtttattgaaaccattgaattcg 2185
>gb|AF528911.1| Saruma henryi photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2207 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||||| | || |||||| ||||||| | | Sbjct: 2095 atttatggctacacaaaccgttgaggatagttctagatctgggccaagacgaactattac 2154 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2155 aggggatttattgaaaccattgaattcggaatatggtaaagt 2196
>gb|AY147543.1| Muscari comosum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2178 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2074 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2133 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcg 105 |||| || |||| | ||| |||||| ||||||| ||||||||| Sbjct: 2134 ccaagacaaactaccgtagggagtttattgaaaccattgaattcg 2178
>gb|AY147537.1| Aphyllanthes monspeliensis photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2203 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaac 67 |||||||| |||||||||||||||||||||||| | |||||||| | ||||||||| || Sbjct: 2081 attaaataggatttatggctacacaaaccgttgagggtagttctagatctaggccaagac 2140 Query: 68 gaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccgg 127 ||||| | ||| | ||| ||||||| ||||||||||||||||| ||||| || |||| Sbjct: 2141 aaactgccgtagggaagttattgaaacctttgaattcggaatatggtaaagtagctccgg 2200 Query: 128 g 128 | Sbjct: 2201 g 2201
>gb|AY147503.1| Narthecium ossifragum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2181 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | || | Sbjct: 2077 accaatgattaaatagaatttatggctacacaaaccgtcgaggatagttctagatctgcg 2136 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcg 105 |||| ||||||| || ||| | |||| ||||||| ||||||||| Sbjct: 2137 ccaagacgaactaatgtagggaatttattgaaaccgttgaattcg 2181
>gb|AY147545.1| Yucca glauca photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2204 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | |||| Sbjct: 2075 accaatgattaaataagatttatggctacacaaaccgttgagggtagttctagatctaga 2134 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || |||| | ||| | |||| ||||||| || |||||||||||||| ||||| Sbjct: 2135 ccaagacaaactaccgtagggaatttattgaaaccattaaattcggaatatggtaaagta 2194 Query: 121 gccccggg 128 || ||||| Sbjct: 2195 gctccggg 2202
>gb|AY147544.1| Narcissus elegans photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2209 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||||||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2080 accaatgattaaataggatttatggctacacaaaccgttgagggtagttctagatctagg 2139 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagtc 120 |||| || ||| | ||| | |||| ||||||| |||||||||||||| || ||||| Sbjct: 2140 ccaagacaaacgcccgtagggaatttattgaaaccattgaattcggaatacggtaaagtg 2199 Query: 121 gccccggg 128 || ||||| Sbjct: 2200 gctccggg 2207
>gb|AY147523.1| Coelogyne cristata photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2493 Score = 87.7 bits (44), Expect = 4e-14 Identities = 87/102 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||| |||||||||| |||||||| | || |||||| ||||||||| | Sbjct: 2381 atttatggctacaaaaaccgttganagtagttctagatctgggccaagacgaactggcgt 2440 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 | | |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2441 anggagtttattgaaaccattgaattcggaatatggaaaagt 2482
>gb|AY147506.1| Zigadenus elegans photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2190 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 21 tatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcagg 80 ||||||||||||||||||||| | |||||||| | || |||| ||||||| |||||| Sbjct: 2081 tatggctacacaaaccgttgagggtagttctagatctgccccaagacgaactaatgcagg 2140 Query: 81 tagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 |||||| ||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 2141 gagtttattgaaaccattgaattcggaatatggtaaagtagctccggg 2188
>emb|X55900.1|OHPHSYII Oenothera elata subsp. hookeri plastid DNA for psbB, psbH and psbN genes for chlorophyll a-binding apoprotein, 10 kDa phosphoprotein, and unknown protein of photosystem II, respectively Length = 2894 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 21 tatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcagg 80 ||||||||||||||| | ||| || ||||||| | |||| |||||| ||| ||| ||| Sbjct: 2657 tatggctacacaaactgctgaggagagttctagagctagaccaaaaaaaacaggtttagg 2716 Query: 81 tagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactac 140 | ||| ||||||| || ||||| |||||||| ||||| || || || ||||| ||||| Sbjct: 2717 ggggttattgaaaccattaaattcagaatatggtaaagtagctcctgggtggggaactac 2776 Query: 141 tccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaat 200 ||||| |||| | ||||||||| |||| || ||||| | ||||| ||||| ||||| Sbjct: 2777 ccctttgatgggtcttgcaatggctctatttgcggtattcttatctattattttggaaat 2836 Query: 201 ttataattcttcccttttactggatggaattt 232 ||||||||||||| ||||| |||| ||||||| Sbjct: 2837 ttataattcttccgttttattggacggaattt 2868
>emb|X55899.1|AOPHSYII Oenothera argillicola plastid DNA for psbB, psbH and psbN genes for chlorophyll a-binding apoprotein (CP47), 10kDa phosphoprotein, and unknown protein of photosystem II, respectively Length = 3365 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 21 tatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcagg 80 ||||||||||||||| | ||| || ||||||| | |||| |||||| ||| ||| ||| Sbjct: 3130 tatggctacacaaactgctgaggagagttctagagctagaccaaaaaaaacaggtttagg 3189 Query: 81 tagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactac 140 | ||| ||||||| || ||||| |||||||| ||||| || || || ||||| ||||| Sbjct: 3190 ggggttattgaaaccattaaattcagaatatggtaaagtagctcctgggtggggaactac 3249 Query: 141 tccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaat 200 ||||| |||| | ||||||||| |||| || ||||| | ||||| ||||| ||||| Sbjct: 3250 ccctttgatgggtcttgcaatggctctatttgcggtattcttatctattattttggaaat 3309 Query: 201 ttataattcttcccttttactggatggaattt 232 ||||||||||||| ||||| |||| ||||||| Sbjct: 3310 ttataattcttccgttttattggacggaattt 3341
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 21 tatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcagg 80 ||||||||||||||| | ||| || ||||||| | |||| |||||| ||| ||| ||| Sbjct: 79442 tatggctacacaaactgctgaggagagttctagagctagaccaaaaaaaacaggtttagg 79501 Query: 81 tagtttactgaaacccttgaattcggaatatgggaaagtcgccccgggttgggggactac 140 | ||| ||||||| || ||||| |||||||| ||||| || || || ||||| ||||| Sbjct: 79502 ggggttattgaaaccattaaattcagaatatggtaaagtagctcctgggtggggaactac 79561 Query: 141 tccttttctgggggtcgcaatggctttattcgctatattcctctctatcattttagaaat 200 ||||| |||| | ||||||||| |||| || ||||| | ||||| ||||| ||||| Sbjct: 79562 ccctttgatgggtcttgcaatggctctatttgcggtattcttatctattattttggaaat 79621 Query: 201 ttataattcttcccttttactggatggaattt 232 ||||||||||||| ||||| |||| ||||||| Sbjct: 79622 ttataattcttccgttttattggacggaattt 79653 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 355 tttcggtatctctggaatatgagtgtgtgacttgttagaattgatcctattgataataca 414 |||| |||| || |||||||||||||||||||||||| ||| |||| |||||||| |||| Sbjct: 79777 tttctgtatttccggaatatgagtgtgtgacttgttataatggatcttattgatagtaca 79836
>gb|AF123850.1|AF123850 Drimys winteri photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2199 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||| | | ||||||||| ||||||| | Sbjct: 2087 atttatggctacacaaaccgttgagggtagttccagatctaggccaagacgaactacgac 2146 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgcccc 125 ||| | |||| ||||||| ||||||||||||||||| ||||| ||||| Sbjct: 2147 agggaatttattgaaaccattgaattcggaatatggtaaagtagcccc 2194
>gb|AF528902.1| Houttuynia cordata photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2218 Score = 85.7 bits (43), Expect = 2e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||| | | || |||||| ||||||| | Sbjct: 2106 atttatggctacacaaaccgttgaggatagttccagatctgggccaagacgaactattat 2165 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 2166 aggggatttattgaaaccattgaattcggaatatggtaaagtagccccggg 2216
>gb|AY147529.1| Ixiolirion tataricum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2171 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 ||||||||| ||||| |||||||||||||||||||||||| | |||||||| | ||||| Sbjct: 2078 accaatgatgaaataggatttatggctacacaaaccgttgagggtagttctagagctagg 2137 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaac 94 |||| || ||| |||| ||| |||||| |||||| Sbjct: 2138 ccaagacaaacgggtgtagggagtttattgaaac 2171
>gb|AF528910.1| Ribes aureum photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2185 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||| | || | |||||||||||| ||| Sbjct: 2073 atttatggctacacaaaccgttgagagtagttcccgagctcgtccaaaacgaactaatgc 2132 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||||| ||||||| |||||||| |||||||||||||| Sbjct: 2133 agggagtttattgaaaccattgaattcagaatatgggaaagt 2174
>gb|AF528899.1| Euonymus alatus photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2197 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||| |||||||| |||||| | |||||||| | || | |||||||||||||||| Sbjct: 2085 atttatggttacacaaagcgttgagggtagttctagatctcgtccaaaacgaactggtgt 2144 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| | ||| ||||||| ||||||||||||||||| ||||| Sbjct: 2145 aggggggttattgaaaccattgaattcggaatatggtaaagt 2186
>gb|AF123855.1|AF123855 Liriodendron tulipifera photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2176 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| ||||||| | | Sbjct: 2064 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaactattac 2123 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2124 aggggatttattgaaaccattgaattcggaatatggtaaagt 2165
>gb|AY007466.1| Magnolia stellata photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2192 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| ||||||| | | Sbjct: 2080 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaactattac 2139 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2140 aggggatttattgaaaccattgaattcggaatatggtaaagt 2181
>gb|AF528918.1| Widdringtonia cedarbergensis photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2193 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| |||||| || Sbjct: 2081 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgt 2140 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2141 aggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2191
>gb|AF528917.1| Thuja plicata photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2189 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| |||||| || Sbjct: 2077 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgt 2136 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2137 aggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2187
>gb|AF528916.1| Taxus brevifolia photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2212 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| |||||| || Sbjct: 2100 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgt 2159 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2160 aggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2210
>gb|AF528901.1| Hernandia peltata photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2195 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | |||||||| | || ||| | |||||||| || Sbjct: 2083 atttatggctacacaaactgttgagggtagttctagatctgcgccgagacgaactgctgt 2142 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 2143 aggggatttattgaaacctttgaattcggaatatggtaaagtagccccggg 2193
>gb|AF528898.1| Cunninghamia lanceolata photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2193 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| |||||| || Sbjct: 2081 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgt 2140 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2141 aggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2191
>gb|AF528895.1| Canella winterana photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2193 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| |||||| || Sbjct: 2081 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgt 2140 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2141 aggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2191
>gb|AF528893.1| Aristolochia macrophylla photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2208 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||| ||||||||||||||| || ||||||| | || |||||| | ||||| | | Sbjct: 2096 atttatggttacacaaaccgttgaggacagttctagatctgggccaagaagaactcttac 2155 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 2156 aggggatttattgaaaccattgaattcggaatatggtaaagtagccccggg 2206
>gb|AF123843.1|AF123843 Acorus calamus photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2193 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || |||||| |||||| || Sbjct: 2081 atttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaacaattgt 2140 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2141 aggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2191
>gb|AY147500.1| Scheuchzeria palustris photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2188 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| || | |||| |||||||| || Sbjct: 2083 atttatggctacacaaaccgttgagggtagttctaggtctggtccaagacgaactgctgt 2142 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2143 aggagatttattgaaaccgttgaattcggaatatggtaaagt 2184
>gb|AY147499.1| Butomus umbellatus photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2192 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| || |||||| |||||||| | Sbjct: 2080 atttatggctacacaaaccgttgagggtagttctaggtctgggccaagacgaactgttat 2139 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2140 aggagatttattgaaacctttgaattcggaatatggtaaagt 2181
>gb|AF528897.1| Cornus mas photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2196 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | |||||||| | || | |||| ||||||| || Sbjct: 2084 atttatggctacacaaactgttgagggtagttctagatctggtccaagacgaactactgt 2143 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 || |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2144 ggggagtttattgaaaccattgaattcggaatatggtaaagt 2185
>gb|AY147516.1| Talbotia elegans photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2166 Score = 73.8 bits (37), Expect = 6e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttctaaacctagg 60 |||||| |||||||| |||||||||||||||||||||||| |||||||| ||| || Sbjct: 2062 accaattattaaataggatttatggctacacaaaccgttgaggatagttccaaatctgtt 2121 Query: 61 ccaaaacgaactggtgcaggtagtttactgaaacccttgaattcg 105 |||| ||||||| | ||| |||||| ||||||| ||||||||| Sbjct: 2122 ccaagacgaactacagtagggagtttattgaaaccattgaattcg 2166
>gb|AF123856.1|AF123856 Saururus cernuus photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||| | | || |||||| ||||||| | Sbjct: 2103 atttatggctacacaaaccgttgaggatagttccagatctgggccaagacgaactattat 2162 Query: 78 aggtagtttactgaaacccttgaattcggaatatgg 113 ||| |||| ||||||| ||||||||||||||||| Sbjct: 2163 aggggatttattgaaaccgttgaattcggaatatgg 2198
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtcgca 159 ||||| |||||||| ||||| || || || ||||| ||||||||| || |||| | ||| Sbjct: 54507 aattcagaatatggtaaagtagctcctggatggggaactactcctcttatgggttttgca 54566 Query: 160 atggctttattcgctatattcctctctatcattttagaaatttataattcttccctttta 219 |||||| |||| || ||||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 54567 atggctctatttgcagtattcctatctattatcttggagatttataattcttccgtttta 54626 Query: 220 ctggatgg 227 ||||||| Sbjct: 54627 ttggatgg 54634
>gb|AY147515.1| Roystonea princeps photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2167 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 19 tttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgca 78 ||||||||||||||||||||||| | |||||||| | || |||||| ||||||| || | Sbjct: 2081 tttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaactactgta 2140 Query: 79 ggtagtttactgaaacccttgaattcg 105 || | |||| ||||||| ||||||||| Sbjct: 2141 gggaatttattgaaaccattgaattcg 2167
>gb|AF528915.1| Taxodium distichum photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2163 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 19 tttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgca 78 |||||||||||||||||| |||| | |||||||| | || |||||| |||||| || | Sbjct: 2052 tttatggctacacaaaccattgagggtagttctagatctgggccaagacgaacaattgta 2111 Query: 79 ggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 || |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2112 ggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2161
>gb|AF528913.1| Stewartia pseudocamellia photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2193 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | ||||||| | || | |||| ||||||| | Sbjct: 2081 atttatggctacacaaactgttgagaacagttctagatctggtccaagacgaactaccgt 2140 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2141 agggagtttattgaaaccattgaattcggaatatggtaaagt 2182
>gb|AF528909.1| Platanus occidentalis photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2179 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||| |||||| | |||||||| | || | |||| ||||||| | | Sbjct: 2067 atttatggctacacaaagcgttgagggtagttctagatctggtccaagacgaactattac 2126 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2127 aggggatttattgaaaccattgaattcggaatatggtaaagt 2168
>gb|AF528903.1| Nelumbo lutea photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2201 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | |||||||| | || | |||| ||||||| | Sbjct: 2089 atttatggctacacaaactgttgagggtagttctagatctggtccaagacgaactattat 2148 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| ||||||||||||||||||||||| Sbjct: 2149 aggggatttattgaaaccattgaattcggaatatgggaaagt 2190
>gb|AF123854.1|AF123854 Lactoris fernandeziana photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2206 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| |||||||||| | || | |||| ||||||| || Sbjct: 2094 atttatggctacacaaactgttgaggatagttctagatctggtccaagacgaactcttgt 2153 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| |||||||| |||||||| ||||| Sbjct: 2154 aggagatttattgaaaccattgaattcagaatatggtaaagt 2195
>gb|AY007469.1| Sagittaria latifolia photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2204 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | | |||||| || |||||| ||||||| || Sbjct: 2092 atttatggctacacaaactgttgagggtggttctaggtctgggccaagacgaactaatgt 2151 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 2152 aggaagtttattgaaaccattaaattcggaatatggtaaagt 2193
>gb|AY147526.1| Cypripedium passerinum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2715 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||| |||||||||| |||||||| | || |||||| ||||||| | | Sbjct: 2628 atttatggctacaaaaaccgttgagagtagttctagatctgggccaagacgaactagcgt 2687 Query: 78 aggtagtttactgaaacccttgaattcg 105 ||| |||||| ||||||| ||||||||| Sbjct: 2688 agggagtttattgaaaccattgaattcg 2715
>gb|AY147517.1| Typha angustifolia photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2169 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttcta 52 |||||| |||||||| ||||||||||||||||||||| || |||||||||| Sbjct: 2061 accaatcattaaataggatttatggctacacaaaccgtagaggatagttcta 2112
>gb|DQ160103.1| Taraxacum officinale TO78-1rc (To78-1rc) mRNA, partial cds Length = 244 Score = 63.9 bits (32), Expect = 6e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 97 ttgaattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtc 156 ||||||||||||||||| ||||| || || || ||||| || || ||||| | || || Sbjct: 9 ttgaattcggaatatggtaaagtagctcctgggtggggaacgacccctttgataggtgtt 68 Query: 157 gcaatggctttattcgctatattcctctctatcattttagaaatttataattcttccctt 216 ||||||||| |||| || |||| || ||||| ||||| || |||||||||||| || || Sbjct: 69 gcaatggctctatttgcggtatttctatctattattttggagatttataattctcccgtt 128 Query: 217 ttactggatggaattt 232 ||| |||| ||||||| Sbjct: 129 ttattggacggaattt 144
>gb|DQ069620.1| Ginkgo biloba photosystem II phosphoprotein (psbH) gene, partial cds; chloroplast Length = 225 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Plus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtcgca 159 ||||| |||||||| ||||| || || || ||||| |||||||||||| |||| || ||| Sbjct: 79 aattcagaatatggtaaagtagctcctggatggggaactactccttttatgggtgttgca 138 Query: 160 atggctttattcgctatattcctctctatcattttagaaatttataattcttccctttta 219 |||||| |||| || ||||| | ||||| || || ||||||||||||||| ||||| Sbjct: 139 atggctctatttgcagtattcttatctattatcccggagatttataattcttccgtttta 198 Query: 220 ctggatggaatt 231 | ||||||||| Sbjct: 199 ttagatggaatt 210
>gb|AF123848.1|AF123848 Cercidiphyllum japonicum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2157 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||| | | || | |||| ||||||| || Sbjct: 2058 atttatggctacacaaaccgttgagggtagttccagatctggtccaagacgaactattgt 2117 Query: 78 aggtagtttactgaaacccttgaattcggaatatgg 113 ||| |||| ||||||| ||||||||||||||||| Sbjct: 2118 aggggatttattgaaaccattgaattcggaatatgg 2153
>gb|AF123847.1|AF123847 Ceratophyllum demersum photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2191 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| |||| | |||||||| | || | |||| |||||||| || Sbjct: 2079 atttatggctacacaaacaattgagggtagttctagatctggaccaagacgaactgttgt 2138 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgcccc 125 ||| |||| ||||||| |||||||| |||||||| ||||| ||||| Sbjct: 2139 aggggatttattgaaacctttgaattcagaatatggtaaagtagcccc 2186
>gb|AY147511.1| Hydrothrix gardneri photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2166 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||| |||||| |||||||| | || |||||| ||||||| || Sbjct: 2079 atttatggctacacaaagcgttgagagtagttctagatctgggccaagacgaactactgt 2138 Query: 78 aggtagtttactgaaacccttgaattc 104 ||| |||||| ||||||| |||||||| Sbjct: 2139 agggagtttattgaaaccattgaattc 2165
>gb|AY147509.1| Dasypogon hookeri photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2178 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 19 tttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactg 73 ||||||||||||||||||||||| | |||||||| | || |||||| |||||||| Sbjct: 2095 tttatggctacacaaaccgttgagggtagttctagatctgggccaagacgaactg 2149
>gb|AF528912.1| Spinacia oleracea photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2177 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| |||||||| | || | ||||||| ||| || Sbjct: 2065 atttatggctacacaaaccgttgagagtagttctagatctcgtccaaaacctactactgt 2124 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 ||| |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2125 aggggctttattgaaaccattgaattcagaatatggtaaagtagccccggg 2175
>gb|AY007467.1| Pisum sativum photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2172 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || | |||| |||||||| || Sbjct: 2085 atttatggctacacaaaccgttgagggtagttctagatctggtccaagacgaactgttgt 2144 Query: 78 aggtagtttactgaaacccttgaattc 104 ||| |||| ||||||| |||||||| Sbjct: 2145 aggagatttattgaaaccattgaattc 2171
>gb|AY007458.1| Arabidopsis thaliana photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2069 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttcta 52 |||||||||||||||||| |||||||||||||||| Sbjct: 2001 atttatggctacacaaactgttgaagatagttcta 2035
>gb|AF528900.1| Euptelea polyandra photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2191 Score = 60.0 bits (30), Expect = 9e-06 Identities = 79/96 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || | |||| ||||||| | Sbjct: 2079 atttatggctacacaaaccgttgagggtagttctagatctggtccaagacgaactattat 2138 Query: 78 aggtagtttactgaaacccttgaattcggaatatgg 113 ||| |||| ||||||| || |||||||||||||| Sbjct: 2139 aggggatttattgaaaccattraattcggaatatgg 2174
>gb|AF528892.1| Agathis robusta photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2167 Score = 60.0 bits (30), Expect = 9e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 19 tttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgca 78 |||||||||||||| ||| |||| | |||||||| | || |||||| |||||| || | Sbjct: 2056 tttatggctacacagaccattgagggtagttctagatctgggccaagacgaacaattgta 2115 Query: 79 ggtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 || |||| ||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2116 ggggatttattgaaaccattgaattcagaatatggtaaagtagccccggg 2165
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtcgca 159 |||||||||||||| ||||| || || || ||||| || |||||| || |||| |||||| Sbjct: 12109 aattcggaatatggtaaagtagctcctggatggggaaccactcctattatgggtgtcgca 12050 Query: 160 atggctttattcgc 173 ||||||| |||||| Sbjct: 12049 atggcttcattcgc 12036
>gb|AF528904.1| Pachysandra terminalis photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and psbH gene, partial sequence; chloroplast Length = 2206 Score = 58.0 bits (29), Expect = 4e-05 Identities = 90/109 (82%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 20 ttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgcag 79 ||||||||||||||| |||||| | |||||||| | | | |||| ||||||| || || Sbjct: 2097 ttatggctacacaaatcgttgagggtagttctagatcgggtccaagacgaactactgtag 2156 Query: 80 gtagtttactgaaacccttgaattcggaatatgggaaagtcgccccggg 128 | | || | ||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 2157 ggaatt-attgaaaccattgaattcggaatatggtaaagtagccccggg 2204
>gb|AF123857.1|AF123857 Trochodendron aralioides photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2152 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||| ||||||||||||||| | |||||||| | || | |||| ||||||| | | Sbjct: 2060 atttatggttacacaaaccgttgagggtagttctagatctggtccaagacgaactattac 2119 Query: 78 aggtagtttactgaaacccttgaattcggaata 110 ||| |||| ||||||| |||||||||||||| Sbjct: 2120 aggggatttattgaaaccattgaattcggaata 2152
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactcc 143 |||||||||||||||||||| || || |||||||| |||||||| Sbjct: 70099 aattcggaatatgggaaagttgctcctggttggggaactactcc 70142
>gb|AF528906.1| Phytolacca americana photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 83/102 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||||||||| | |||||||| | || | ||||||| ||| | Sbjct: 2077 atttatggctacacaaaccgttgagggtagttctagagctcgtccaaaacctactaccgt 2136 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| |||| ||||||| |||||||| |||||||| ||||| Sbjct: 2137 aggggctttattgaaaccattgaattckgaatatggtaaagt 2178
>gb|AF188851.1|AF188851 Nymphaea odorata photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2168 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 ||||||||||||||||||| |||| | |||||| | | || |||||| ||| ||| || Sbjct: 2056 atttatggctacacaaaccattgagggtagttccagatctgggccaagacggactattgt 2115 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagtcgcccc 125 ||| |||| | ||||| ||||||||||||||||| ||||| ||||| Sbjct: 2116 aggcgatttattaaaaccattgaattcggaatatggtaaagtagcccc 2163
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactactccttttctgggggtcgca 159 ||||| |||||||| ||||| || || || ||||| |||||| || || |||| | || Sbjct: 52588 aattcagaatatggtaaagtagctcctggatggggaactactgctcttatgggttttaca 52647 Query: 160 atggctttattcgctatattcctctctatcattttagaaatttataattcttccctttta 219 |||||| |||| || ||||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 52648 atggctctatttgcagtattcctatctattatcttggagatttataattcttccgtttta 52707 Query: 220 ctggatgg 227 ||||||| Sbjct: 52708 ttggatgg 52715
>gb|AF123849.1|AF123849 Dioscorea bulbifera photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2190 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaact 72 ||||||||||||||||||||| || | |||||||| | || |||||| ||||||| Sbjct: 2113 atttatggctacacaaaccgtagagggtagttctagatctgggccaagacgaact 2167
>gb|AF528908.1| Pittosporum verrucosum photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2223 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| ||||| | |||||| | || | ||||||| |||| | Sbjct: 2111 atttatggctacacaaactgttgagaacggttctagatctcgtccaaaaccaactaccgt 2170 Query: 78 aggtagtttactgaaacccttgaattcggaatatgggaaagt 119 ||| | |||| ||||||| ||||||||||||||||| ||||| Sbjct: 2171 agggaatttattgaaaccgttgaattcggaatatggtaaagt 2212
>gb|AF528894.1| Mahonia aquifolium photosystem II cp47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast Length = 2253 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 82 agtttactgaaacccttgaattcggaatatgggaaagt 119 |||||| ||||||| ||||||||||||||||| ||||| Sbjct: 2205 agtttattgaaaccgttgaattcggaatatggtaaagt 2242 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttga 41 |||||||||||||||||||||||| Sbjct: 2135 atttatggctacacaaaccgttga 2158
>gb|AF482496.1| Chara fibrosa photosystem II P680 chlorophyll A apoprotein (psbB), photosystem II PsbT (psbT), photosystem II PsbN (psbN), photosystem II PsbH (psbH), and cytochrome b6 (petB) genes; and cytochrome b6-f complex subunit 4 (petD) gene, partial cds; chloroplast genes for chloroplast products Length = 5240 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 17 aatttatggctacacaaaccgttgaagata 46 |||||||||||||||||| ||||||||||| Sbjct: 2273 aatttatggctacacaaatcgttgaagata 2302
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 94 cccttgaattcggaatatgggaaagtcgccccgggttgggggactactcc 143 |||||||| || ||||| || ||||||||||| ||||||||||| ||||| Sbjct: 1452970 cccttgaactctgaatacggtaaagtcgcccccggttgggggaccactcc 1452921
>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026A08 Length = 171272 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagat 45 ||||||| |||| ||||||||||||| ||||||||||| Sbjct: 36816 attaaatgtaatatatggctacacaacccgttgaagat 36853
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacacaaaccgttgaagat 45 ||||||| |||| ||||||||||||| ||||||||||| Sbjct: 120163 attaaatgtaatatatggctacacaacccgttgaagat 120200
>gb|AY147513.1| Palisota bogneri photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2162 Score = 50.1 bits (25), Expect = 0.009 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1 accaatgattaaatataatttatggctacacaaaccgttgaagatagttcta 52 |||||| || ||||| |||||||| ||||||||||||||| | |||||||| Sbjct: 2058 accaataatgaaataggatttatggntacacaaaccgttgagggtagttcta 2109
>gb|AY147502.1| Burmannia capitata photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2183 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 4 aatgattaaatataatttatggctacacaaaccgttgaagatagttcta 52 |||||||||||| |||||||| ||||||||| |||||| |||||||| Sbjct: 2084 aatgattaaataggatttatggttacacaaactgttgaaagtagttcta 2132
>gb|AY116656.1| Trimenia moorei photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2223 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttc 50 ||||||||||||||||||| |||| |||||||| Sbjct: 2127 atttatggctacacaaaccattgaggatagttc 2159
>gb|AY007460.1| Austrobaileya scandens photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2398 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttc 50 ||||||||||||||||||| |||| |||||||| Sbjct: 2286 atttatggctacacaaaccattgaggatagttc 2318
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 273 agtttttccatccaaaaaagcctttctagtttaagctcta 312 ||||||| ||||||||| |||||||||||| ||| ||||| Sbjct: 138542 agttttttcatccaaaagagcctttctagtgtaacctcta 138581 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacac-aaaccgttgaagatagttct 51 |||||||| |||||||||||| || ||| ||||||||||||||| Sbjct: 138039 attaaatagaatttatggctatacaaaaatgttgaagatagttct 138083
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 273 agtttttccatccaaaaaagcctttctagtttaagctcta 312 ||||||| ||||||||| |||||||||||| ||| ||||| Sbjct: 33740 agttttttcatccaaaagagcctttctagtgtaacctcta 33779 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacac-aaaccgttgaagatagttct 51 |||||||| |||||||||||| || ||| ||||||||||||||| Sbjct: 33237 attaaatagaatttatggctatacaaaaatgttgaagatagttct 33281
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 369 gaatatgagtgtgtgacttgttagaattgatcctattgataatacata 416 |||| |||||| |||||||||||||||||| | ||| |||| |||||| Sbjct: 20536 gaatttgagtgagtgacttgttagaattgaccatatagatagtacata 20583
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 369 gaatatgagtgtgtgacttgttagaattgatcctattgataatacata 416 |||| |||||| |||||||||||||||||| | ||| |||| |||||| Sbjct: 154751 gaatttgagtgagtgacttgttagaattgaccatatagatagtacata 154798
>gb|AY642682.1| Ceiba pentandra voucher CWD-P519 pbsB, pbsT and pbsN genes, genomic sequence; chloroplast Length = 746 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttga 41 |||||||||||||||||||||||| Sbjct: 718 atttatggctacacaaaccgttga 741
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 273 agtttttccatccaaaaaagcctttctagtttaagctcta 312 ||||||| ||||||||| |||||||||||| ||| ||||| Sbjct: 29255083 agttttttcatccaaaagagcctttctagtgtaacctcta 29255122 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 8 attaaatataatttatggctacac-aaaccgttgaagatagttct 51 |||||||| |||||||||||| || ||| ||||||||||||||| Sbjct: 29254580 attaaatagaatttatggctatacaaaaatgttgaagatagttct 29254624
>gb|AF123845.1|AF123845 Cabomba caroliniana photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2161 Score = 48.1 bits (24), Expect = 0.034 Identities = 87/108 (80%) Strand = Plus / Plus Query: 12 aatataatttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaac 71 |||| |||||||||||||||||| |||| |||||||| | | || ||||| |||||| Sbjct: 2044 aatagaatttatggctacacaaataattgaggatagttccagatctgcgccaagacgaac 2103 Query: 72 tggtgcaggtagtttactgaaacccttgaattcggaatatgggaaagt 119 | || ||| |||| | ||||| ||||||||||||||||| ||||| Sbjct: 2104 tcttgtaggcgatttattaaaaccattgaattcggaatatggtaaagt 2151
>gb|AY007471.1| Spathiphyllum wallisii photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2185 Score = 48.1 bits (24), Expect = 0.034 Identities = 72/88 (81%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaactggtgc 77 |||||||||||||||||| || || | |||||||| | || |||||| ||||||| || Sbjct: 2098 atttatggctacacaaactgtcgagggtagttctagatctgggccaagacgaacttttgt 2157 Query: 78 aggtagtttactgaaacccttgaattcg 105 ||| |||| ||||||| ||||||||| Sbjct: 2158 aggggatttattgaaaccgttgaattcg 2185
>gb|AY608018.1| Petalophyllum ralfsii photosystem II subunit T (psbT) gene, partial sequence; photosystem II subunit N (psbN) gene, complete sequence; and photosystem II subunit H (psbH) gene, partial sequence; chloroplast Length = 492 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 89 tgaaacccttgaattcggaatatgggaaagt 119 ||||||| ||||||||||||||||| ||||| Sbjct: 462 tgaaaccattgaattcggaatatggwaaagt 492
>gb|AY147501.1| Tofieldia glutinosa photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit T (psbT) and photosystem II subunit N (psbN) genes, complete cds; and photosystem II subunit H (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2101 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttctaaacctaggccaaaacgaact 72 ||||||||||||||||||||| || | ||||||| | || |||||| ||||||| Sbjct: 2015 atttatggctacacaaaccgtcgaggggagttctagatctgggccaagacgaact 2069
>gb|AF123846.1|AF123846 Calycanthus floridus photosystem II CP47 protein (psbB) gene, partial cds; photosystem II subunit (psbT) and photosystem II subunit (psbN) genes, complete cds; and photosystem II subunit (psbH) gene, chloroplast genes encoding chloroplast proteins, partial cds Length = 2135 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttcta 52 |||||||||||||||||| ||||| | |||||||| Sbjct: 2059 atttatggctacacaaactgttgagggtagttcta 2093
>gb|AY007463.1| Gunnera chilensis photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products Length = 2052 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgttgaagatagttcta 52 |||||||||||||||||| ||||| | |||||||| Sbjct: 1975 atttatggctacacaaacagttgagggtagttcta 2009
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Minus Query: 100 aattcggaatatgggaaagtcgccccgggttgggggactact 141 ||||| |||||||||||||| || || |||||||| |||||| Sbjct: 101235 aattctgaatatgggaaagtagctcctggttggggtactact 101194
>gb|AC099728.6| Mus musculus chromosome 7, clone RP23-417I5, complete sequence Length = 205550 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 tatcattttagaaatttataattctt 211 |||||||||||||||||||| ||||| Sbjct: 152766 tatcattttagaaatttatatttctt 152791
>gb|AC129604.3| Mus musculus BAC clone RP23-110O3 from 7, complete sequence Length = 189634 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 186 tatcattttagaaatttataattctt 211 |||||||||||||||||||| ||||| Sbjct: 162297 tatcattttagaaatttatatttctt 162272
>emb|CR698376.2|CNS0G1TG Tetraodon nigroviridis full-length cDNA Length = 1443 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gagtttttccatccaaaaaagc 293 |||||||||||||||||||||| Sbjct: 644 gagtttttccatccaaaaaagc 665
>emb|CR688862.2|CNS0FUH6 Tetraodon nigroviridis full-length cDNA Length = 1445 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 gagtttttccatccaaaaaagc 293 |||||||||||||||||||||| Sbjct: 674 gagtttttccatccaaaaaagc 695
>gb|AC124152.1| Populus deltoides, complete sequence Length = 2373 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 464 tatttattctagtatctggaacacgaaata 493 |||||||||||||||||||| |||| |||| Sbjct: 73 tatttattctagtatctggagcacggaata 102
>gb|AF369754.1|AF369754 Populus deltoides clone AK56U, chloroplast sequence Length = 538 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 464 tatttattctagtatctggaacacgaaata 493 |||||||||||||||||||| |||| |||| Sbjct: 478 tatttattctagtatctggagcacggaata 449
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.53 Identities = 40/46 (86%) Strand = Plus / Minus Query: 515 tggaactatgattcatactcactattaagacctcgcaaccagactg 560 ||||||||||||||||| | ||| || ||||||| |||||| |||| Sbjct: 4085550 tggaactatgattcatattaacttttcagacctctcaaccaaactg 4085505
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 44.1 bits (22), Expect = 0.53 Identities = 40/46 (86%) Strand = Plus / Minus Query: 515 tggaactatgattcatactcactattaagacctcgcaaccagactg 560 ||||||||||||||||| | ||| || ||||||| |||||| |||| Sbjct: 78408 tggaactatgattcatattaacttttcagacctctcaaccaaactg 78363
>gb|AC166646.4| Mus musculus chromosome 3, clone RP24-400P18, complete sequence Length = 176864 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 attttagaaatttataattct 210 ||||||||||||||||||||| Sbjct: 74466 attttagaaatttataattct 74446
>gb|AY608020.1| Porella pinnata photosystem II subunit T (psbT) gene, partial sequence; photosystem II subunit N (psbN) gene, complete sequence; and photosystem II subunit H (psbH) gene, partial sequence; chloroplast Length = 479 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 aaacccttgaattcggaatatgggaaagt 119 ||||| ||||||||||||||||| ||||| Sbjct: 451 aaaccattgaattcggaatatggwaaagt 479
>gb|AY608014.1| Marsupidium latifolium photosystem II subunit T (psbT) gene, partial sequence; photosystem II subunit N (psbN) gene, complete sequence; and photosystem II subunit H (psbH) gene, partial sequence; chloroplast Length = 475 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 aaacccttgaattcggaatatgggaaagt 119 ||||| ||||||||||||||||| ||||| Sbjct: 447 aaaccgttgaattcggaatatggwaaagt 475
>gb|AC120390.12| Mus musculus chromosome 9, clone RP24-308L17, complete sequence Length = 138507 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 40459 caatgattaaatataatttat 40479
>gb|AC162872.9| Mus musculus chromosome 3, clone RP24-346J6, complete sequence Length = 147221 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 attttagaaatttataattct 210 ||||||||||||||||||||| Sbjct: 123671 attttagaaatttataattct 123691
>ref|XM_972617.1| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 1 (3222402P14Rik), mRNA Length = 2263 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 159 caatgattaaatataatttat 179
>ref|XM_972659.1| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 2 (3222402P14Rik), mRNA Length = 2921 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 159 caatgattaaatataatttat 179
>ref|XM_972712.1| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 3 (3222402P14Rik), mRNA Length = 9018 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 191 caatgattaaatataatttat 211
>ref|XM_897869.2| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 2 (3222402P14Rik), mRNA Length = 2263 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 159 caatgattaaatataatttat 179
>ref|XM_897889.2| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 4 (3222402P14Rik), mRNA Length = 2921 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 159 caatgattaaatataatttat 179
>ref|XM_897879.2| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 3 (3222402P14Rik), mRNA Length = 9089 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 191 caatgattaaatataatttat 211
>ref|XM_977996.1| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 13 (3222402P14Rik), mRNA Length = 2253 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 159 caatgattaaatataatttat 179
>ref|XM_920102.2| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 10 (3222402P14Rik), mRNA Length = 2921 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 159 caatgattaaatataatttat 179
>ref|XM_978066.1| PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 14 (3222402P14Rik), mRNA Length = 9018 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caatgattaaatataatttat 23 ||||||||||||||||||||| Sbjct: 191 caatgattaaatataatttat 211
>gb|AC146704.8| Medicago truncatula clone mth2-107f11, complete sequence Length = 116591 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 atcattttagaaatttataat 207 ||||||||||||||||||||| Sbjct: 66241 atcattttagaaatttataat 66261
>emb|Z95400.2|HS393P23 Human DNA sequence from clone RP3-393P23 on chromosome Xq21.1-21.33 Contains the 5' end of the KLHL4 gene for kelch-like 4 (Drosophila), complete sequence Length = 133120 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 tctagtatctggaacacgaaa 491 ||||||||||||||||||||| Sbjct: 120731 tctagtatctggaacacgaaa 120751
>dbj|AB237024.1| Loropetalum chinense chloroplast DNA, psbB-psbH gene region. clone:54 Length = 749 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 722 atttatggctacacaaaccgt 742
>dbj|AB237022.1| Corylopsis veitchiana chloroplast DNA, psbB-psbH gene region. clone:52 Length = 753 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 721 atttatggctacacaaaccgt 741
>dbj|AB237021.1| Corylopsis spicata chloroplast DNA, psbB-psbH gene region. clone:51 Length = 753 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 722 atttatggctacacaaaccgt 742
>dbj|AB237019.1| Corylopsis stenopetala chloroplast DNA, psbB-psbH gene region. clone:49 Length = 724 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 703 atttatggctacacaaaccgt 723
>dbj|AB237018.1| Corylopsis yunnanensis chloroplast DNA, psbB-psbH gene region. clone:48 Length = 743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 712 atttatggctacacaaaccgt 732
>dbj|AB237017.1| Corylopsis glabrescens chloroplast DNA, psbB-psbH gene region. clone:47 Length = 751 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 723 atttatggctacacaaaccgt 743
>dbj|AB237016.1| Corylopsis glabrescens chloroplast DNA, psbB-psbH gene region. clone:46 Length = 751 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 724 atttatggctacacaaaccgt 744
>dbj|AB237015.1| Corylopsis willmottiae chloroplast DNA, psbB-psbH gene region. clone:45 Length = 751 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 724 atttatggctacacaaaccgt 744
>dbj|AB237014.1| Corylopsis sinensis chloroplast DNA, psbB-psbH gene region. clone:44 Length = 746 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 715 atttatggctacacaaaccgt 735
>dbj|AB237013.1| Corylopsis pauciflora chloroplast DNA, psbB-psbH gene region. clone:43 Length = 748 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 724 atttatggctacacaaaccgt 744
>dbj|AB237012.1| Corylopsis pauciflora chloroplast DNA, psbB-psbH gene region. clone:42 Length = 736 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 713 atttatggctacacaaaccgt 733
>dbj|AB237011.1| Corylopsis pauciflora chloroplast DNA, psbB-psbH gene region. clone:41 Length = 748 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 722 atttatggctacacaaaccgt 742
>dbj|AB237010.1| Corylopsis glabrescens chloroplast DNA, psbB-psbH gene region. clone:40 Length = 748 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atttatggctacacaaaccgt 38 ||||||||||||||||||||| Sbjct: 717 atttatggctacacaaaccgt 737 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,761,445 Number of Sequences: 3902068 Number of extensions: 5761445 Number of successful extensions: 119380 Number of sequences better than 10.0: 290 Number of HSP's better than 10.0 without gapping: 294 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117339 Number of HSP's gapped (non-prelim): 1860 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
