ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3k17 |
|---|---|
| Clone Library Name | barley_pub |
>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 Score = 261 bits (667), Expect = 5e-70 Identities = 128/131 (97%), Positives = 128/131 (97%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSN AS SVSNGGRIRCMQVWPIEGIKKFE Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSN-ASSASVSNGGRIRCMQVWPIEGIKKFE 59 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM Sbjct: 60 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 119 Query: 386 FGCTDATQVLN 418 FGCTDATQVLN Sbjct: 120 FGCTDATQVLN 130
>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 Score = 257 bits (657), Expect = 7e-69 Identities = 124/131 (94%), Positives = 127/131 (96%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MAP VMASSAT+VAPFQGLKSTAGLPVSRRS G SLGSVSNGGRIRCMQVWPIEGIKKFE Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSRG-SLGSVSNGGRIRCMQVWPIEGIKKFE 59 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 TLSYLPPLSTEAL KQVDYLIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLPM Sbjct: 60 TLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 119 Query: 386 FGCTDATQVLN 418 FGCTDATQVLN Sbjct: 120 FGCTDATQVLN 130
>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 257 bits (657), Expect = 7e-69 Identities = 123/130 (94%), Positives = 124/130 (95%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 TLSYLPPLSTE LLKQVDYLIRSKWVPCLEF KVGFIFREHN SPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFRKVGFIFREHNVSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVL 415 FGC TQV+ Sbjct: 121 FGCPAPTQVI 130
>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 Score = 254 bits (650), Expect = 4e-68 Identities = 120/131 (91%), Positives = 124/131 (94%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MAP VMASSAT+VAPFQGLKSTAGLP+S RS L SVSNGGRIRCMQVWPIEGIKKFE Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVLN 418 FGCTDATQVLN Sbjct: 121 FGCTDATQVLN 131
>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 175 Score = 241 bits (615), Expect = 5e-64 Identities = 110/130 (84%), Positives = 124/130 (95%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MAP+VMASSAT+VAPFQGLKSTAG+PV+RRS +S G+VSNGGRIRCMQVWPIEGIKKFE Sbjct: 1 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVL 415 FGCTDATQVL Sbjct: 121 FGCTDATQVL 130
>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) Length = 175 Score = 239 bits (609), Expect = 3e-63 Identities = 111/130 (85%), Positives = 122/130 (93%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MAPTVMASSATSVAPFQGLKSTAGLPVSRRS + G+VSNGGRI+ MQVWPIEGIKKFE Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKFMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVL 415 FGCTDATQVL Sbjct: 121 FGCTDATQVL 130
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 170 Score = 219 bits (557), Expect = 3e-57 Identities = 106/130 (81%), Positives = 118/130 (90%), Gaps = 1/130 (0%) Frame = +2 Query: 26 MAPTVM-ASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKF 202 MAPTVM ASSAT+VAPFQGLKSTA LPV+RRS+ SLG+VSNGGRIRCMQVWP G KKF Sbjct: 1 MAPTVMMASSATAVAPFQGLKSTASLPVARRSS-RSLGNVSNGGRIRCMQVWPAYGNKKF 59 Query: 203 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 382 ETLSYLPPLST+ LLKQVDYL+R+ W+PCLEFSKVGF++RE++ SP YYDGRYWTMWKLP Sbjct: 60 ETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLP 119 Query: 383 MFGCTDATQV 412 MFGC DATQV Sbjct: 120 MFGCNDATQV 129
>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 213 bits (541), Expect = 2e-55 Identities = 102/129 (79%), Positives = 112/129 (86%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MA TVMASSAT+ APFQGLKSTA LPV+RRS SL VSNGGRIRCMQVWP G KKFE Sbjct: 1 MALTVMASSATAAAPFQGLKSTASLPVARRST-TSLAKVSNGGRIRCMQVWPAYGNKKFE 59 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 TLSYLPPL+ E LLKQVDYL+R+ WVPCLEFSK GF++RE++ SP YYDGRYWTMWKLPM Sbjct: 60 TLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPM 119 Query: 386 FGCTDATQV 412 FGCTDA+QV Sbjct: 120 FGCTDASQV 128
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5B) Length = 177 Score = 192 bits (487), Expect = 4e-49 Identities = 86/133 (64%), Positives = 104/133 (78%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 STA V + VAPF GL+S+ P +R++N SNGGR+ CMQVWP EG+K Sbjct: 8 STAAVARVGPAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLK 67 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 KFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWK Sbjct: 68 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWK 127 Query: 377 LPMFGCTDATQVL 415 LPMFGCTDA+QV+ Sbjct: 128 LPMFGCTDASQVI 140
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5A) Length = 177 Score = 191 bits (485), Expect = 6e-49 Identities = 85/133 (63%), Positives = 105/133 (78%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 STA + ++ VAPF GL+S+ P +R++N SNGGR+ CMQVWP EG+K Sbjct: 8 STAAVARAGPAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLK 67 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 KFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWK Sbjct: 68 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWK 127 Query: 377 LPMFGCTDATQVL 415 LPMFGCTDA+QV+ Sbjct: 128 LPMFGCTDASQVI 140
>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 172 Score = 189 bits (480), Expect = 2e-48 Identities = 93/131 (70%), Positives = 108/131 (82%), Gaps = 1/131 (0%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRS-NGASLGSVSNGGRIRCMQVWPIEGIKKF 202 MAP+VMASSAT+VAPFQG ++ P RR + L +GGRIRCMQVWPIEGIKKF Sbjct: 1 MAPSVMASSATTVAPFQG---SSPPPACRRPPSELQLRQRQHGGRIRCMQVWPIEGIKKF 57 Query: 203 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 382 ETLSYLPPL+ E LLKQ++YL + VPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP Sbjct: 58 ETLSYLPPLTVEDLLKQIEYLAPFQVVPCLEFSKVGFVYRENHKSPGYYDGRYWTMWKLP 117 Query: 383 MFGCTDATQVL 415 MFGCTDATQV+ Sbjct: 118 MFGCTDATQVV 128
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU26) Length = 177 Score = 189 bits (479), Expect = 3e-48 Identities = 84/133 (63%), Positives = 104/133 (78%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 STA + + VAPF GL+S+ P +R++N SNGG++ CMQVWP EG+K Sbjct: 8 STAAVARAGPAQSNMVAPFNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLK 67 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 KFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWK Sbjct: 68 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWK 127 Query: 377 LPMFGCTDATQVL 415 LPMFGCTDA+QV+ Sbjct: 128 LPMFGCTDASQVI 140
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU1) Length = 173 Score = 186 bits (472), Expect = 2e-47 Identities = 83/133 (62%), Positives = 101/133 (75%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 STA V + V F G +S+ P +R++N S+GGR+ CMQVWP EG+K Sbjct: 4 STAAVARVRPAQTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLK 63 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 KFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE+NASPGYYDGRYWTMWK Sbjct: 64 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNASPGYYDGRYWTMWK 123 Query: 377 LPMFGCTDATQVL 415 LPMFGCTDA+QV+ Sbjct: 124 LPMFGCTDASQVI 136
>RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 179 Score = 186 bits (472), Expect = 2e-47 Identities = 87/138 (63%), Positives = 106/138 (76%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 181 A L S A A V + A+ VAPF GLKS + PV++++ SNGGR++CM+VWP Sbjct: 5 ATMLSSVATAACVAPAQASMVAPFVGLKSASAFPVTQKTVTGLSTLPSNGGRVQCMKVWP 64 Query: 182 IEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRY 361 I G+KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDGRY Sbjct: 65 IVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRY 124 Query: 362 WTMWKLPMFGCTDATQVL 415 WTMWKLPMFGCTDA QV+ Sbjct: 125 WTMWKLPMFGCTDAAQVV 142
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40B) Length = 177 Score = 186 bits (472), Expect = 2e-47 Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 10/140 (7%) Frame = +2 Query: 26 MAPTVMASSATSVA----------PFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 175 MA ++MAS+A +VA PF +S+ P +R++N SNGGR+ CMQV Sbjct: 1 MASSMMASTAAAVARAGPAQTNMVPFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDG 355 WP EG+KKFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYDG Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQVL 415 RYWTMWKLPMFGCTDA+QV+ Sbjct: 121 RYWTMWKLPMFGCTDASQVI 140
>RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 186 bits (471), Expect = 3e-47 Identities = 82/137 (59%), Positives = 105/137 (76%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 181 ++ + S A + ++ VAPF GLKS + PV+R+ N SNGGR++CM+VWP Sbjct: 4 SMMVSSAATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWP 63 Query: 182 IEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRY 361 IEG+KKFETLSYLP + EAL+KQ++YL+RSKW+PCLEF GF++RE++ SPGYYDGRY Sbjct: 64 IEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEFCPKGFVWRENHRSPGYYDGRY 123 Query: 362 WTMWKLPMFGCTDATQV 412 WTMWKLPMFGCTDA QV Sbjct: 124 WTMWKLPMFGCTDAVQV 140
>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2C) Length = 180 Score = 186 bits (471), Expect = 3e-47 Identities = 88/136 (64%), Positives = 106/136 (77%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 + S A+A + A+ VAPF GLKSTA PVSR+ N SNGGR+RCMQVWP Sbjct: 6 MSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 +KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWT Sbjct: 66 MKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chain 1/4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1/4) Length = 179 Score = 185 bits (470), Expect = 3e-47 Identities = 86/135 (63%), Positives = 104/135 (77%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 L S A A + A+ VAPF GLKST+ PV+++ SNGGR++CM+VWPI G Sbjct: 8 LSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVG 67 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 370 +KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDGRYWTM Sbjct: 68 LKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTM 127 Query: 371 WKLPMFGCTDATQVL 415 WKLPMFGCTDA QV+ Sbjct: 128 WKLPMFGCTDAAQVV 142
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 181 Score = 185 bits (470), Expect = 3e-47 Identities = 86/135 (63%), Positives = 108/135 (80%), Gaps = 2/135 (1%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSV-SNGGRIRCMQVWPIEGI 193 S A+A + A+ VAPF GLKS A PV++++N + S+ SNGGR+RCMQVWP + Sbjct: 8 SAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINM 67 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTM 370 KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++REHN+SPGYYDGRYWTM Sbjct: 68 KKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTM 127 Query: 371 WKLPMFGCTDATQVL 415 WKLPMFGCTD TQVL Sbjct: 128 WKLPMFGCTDGTQVL 142
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 180 Score = 185 bits (469), Expect = 4e-47 Identities = 87/134 (64%), Positives = 104/134 (77%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S A+A + A+ V PF GLKSTA PVSR+ N SNGGR+RCMQVWP +K Sbjct: 8 SAAVATRANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMK 67 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMW 373 K+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMW Sbjct: 68 KYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMW 127 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTDATQVL Sbjct: 128 KLPMFGCTDATQVL 141
>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40A) Length = 177 Score = 184 bits (468), Expect = 6e-47 Identities = 85/140 (60%), Positives = 106/140 (75%), Gaps = 10/140 (7%) Frame = +2 Query: 26 MAPTVMASSATSVA----------PFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 175 MA ++MAS+A +VA PF +S+ P +R++N NGGR+ CMQV Sbjct: 1 MASSMMASTAAAVARAGPAQSSMVPFNACRSSVPFPATRKANNNLSTLPGNGGRVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDG 355 WP EG+KKFETLSYLPPLS E L K+VDYL+R+ WVPC+EFSK GF++RE++ASPGYYDG Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQVL 415 RYWTMWKLPMFGCTDA+QV+ Sbjct: 121 RYWTMWKLPMFGCTDASQVI 140
>RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 179 Score = 184 bits (467), Expect = 7e-47 Identities = 86/138 (62%), Positives = 104/138 (75%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 181 A L S A A + A+ VAPF GLKS + PV+++ SNGGR++CM+VWP Sbjct: 5 ATMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVWP 64 Query: 182 IEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRY 361 I G+KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDGRY Sbjct: 65 IVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRY 124 Query: 362 WTMWKLPMFGCTDATQVL 415 WTMWKLPMFGCTDA QV+ Sbjct: 125 WTMWKLPMFGCTDAAQVV 142
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 184 bits (467), Expect = 7e-47 Identities = 85/134 (63%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 +T A + A VAPF GLKS++ PV+R+SN + SNGGR++CMQVWP G+K Sbjct: 12 ATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDIT-SIASNGGRVQCMQVWPPLGLK 70 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLPPLS+E+L K+VDYL+R WVPCLEF + GF++RE++ SPGYYDGRYWTMW Sbjct: 71 KFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMW 130 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTD++QVL Sbjct: 131 KLPMFGCTDSSQVL 144
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) Length = 180 Score = 184 bits (466), Expect = 1e-46 Identities = 87/136 (63%), Positives = 105/136 (77%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 + S A+A + A+ VAPF GLKS A PVSR+ N SNGGR+RCMQVWP Sbjct: 6 MSSAAVATRGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 +KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWT Sbjct: 66 MKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 183 bits (465), Expect = 1e-46 Identities = 86/134 (64%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 +T A + A VAPF GLKS++ PV+R+SN + SNGGR++CMQVWP G+K Sbjct: 12 ATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDIT-SIASNGGRVQCMQVWPPLGLK 70 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLPPLSTE+L K+VDYL+R WVPCLEF + GF++RE++ SPGYYDGRYWTMW Sbjct: 71 KFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMW 130 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTD++QVL Sbjct: 131 KLPMFGCTDSSQVL 144
>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 182 bits (463), Expect = 2e-46 Identities = 84/135 (62%), Positives = 105/135 (77%), Gaps = 1/135 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 + S A+A + A+ VAPF GLKS A PVSR++N SNGGR+RCMQVWP Sbjct: 6 MSSAAVATRSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 +KK+ETLSYLP LS+E LL +++YL+++ WVPCLEF ++ GF++REH +SPGYYDGRYWT Sbjct: 66 MKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQV 412 MWKLPMFGCTDATQV Sbjct: 126 MWKLPMFGCTDATQV 140
>RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 179 Score = 182 bits (462), Expect = 3e-46 Identities = 85/138 (61%), Positives = 104/138 (75%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 181 A L S A A + A+ VAPF GLKS + PV++++ SNGGR++CM+VWP Sbjct: 5 ATMLSSVATAACAAPAQASMVAPFVGLKSASAFPVTQKTATGLSTLPSNGGRVQCMKVWP 64 Query: 182 IEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRY 361 I G+KKFETLSYLP LS E+LLKQ++YLIR+ WVPCLEFS GF+ R++N SPGYYDGRY Sbjct: 65 IVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRY 124 Query: 362 WTMWKLPMFGCTDATQVL 415 WTMWKLPMFGCT A QV+ Sbjct: 125 WTMWKLPMFGCTGAAQVV 142
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU11A) Length = 180 Score = 181 bits (460), Expect = 5e-46 Identities = 85/136 (62%), Positives = 105/136 (77%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 + S A+A + A+ A+ VAPF GLKS A PVSR+ N SNGGR++CMQVWP G Sbjct: 6 MSSAAVATSTNAAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYG 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 KK+ETLSYLP L+ E LLK+++YL+ WVPCLEF ++ GF++RE++ASP YYDGRYWT Sbjct: 66 KKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 181 Score = 181 bits (460), Expect = 5e-46 Identities = 85/135 (62%), Positives = 108/135 (80%), Gaps = 2/135 (1%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSV-SNGGRIRCMQVWPIEGI 193 S A+A + A+ VAPF GLKS A PV++++N + S+ SNGGR+RCMQVWP + Sbjct: 8 SAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINM 67 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTM 370 KK+ETLSYLP LS E LLK+V+YL+++ WVPCLEF ++ GF++RE++ SPGYYDGRYWTM Sbjct: 68 KKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTM 127 Query: 371 WKLPMFGCTDATQVL 415 WKLPMFGCTDATQVL Sbjct: 128 WKLPMFGCTDATQVL 142
>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) (LESS17) Length = 181 Score = 181 bits (459), Expect = 6e-46 Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 2/135 (1%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSV-SNGGRIRCMQVWPIEGI 193 S A A + A+ VAPF GLKS A PV++++N + S+ SNGGR+RCMQVWP + Sbjct: 8 SAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINM 67 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTM 370 KK+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE+N+SPGYYDGRYWTM Sbjct: 68 KKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTM 127 Query: 371 WKLPMFGCTDATQVL 415 WKLPMFGCTDATQVL Sbjct: 128 WKLPMFGCTDATQVL 142
>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) Length = 180 Score = 181 bits (458), Expect = 8e-46 Identities = 86/136 (63%), Positives = 102/136 (75%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 L S A+A + A VAPF GLKS A PVSR+ N SNGGR++CMQVWP Sbjct: 6 LSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 KK+ETLSYLP LS E LL +++YL++S WVPCLEF ++ GF++REH+ SPGYYDGRYWT Sbjct: 66 KKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 183 Score = 181 bits (458), Expect = 8e-46 Identities = 83/134 (61%), Positives = 102/134 (76%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 +T MA + A VAPF GLKS + PV+R++N + SNGGR++CMQVWP G+K Sbjct: 10 ATTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDIT-SVASNGGRVQCMQVWPPLGMK 68 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMW 373 KFETLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMW Sbjct: 69 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMW 128 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTD +QV+ Sbjct: 129 KLPMFGCTDPSQVV 142
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 180 bits (457), Expect = 1e-45 Identities = 86/137 (62%), Positives = 104/137 (75%), Gaps = 4/137 (2%) Frame = +2 Query: 17 STAMAPTVMASS---ATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIE 187 S+A TV ++ AT VAPF GLKSTA P +R+SN SNGGR++CM+VWP Sbjct: 7 SSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPL 66 Query: 188 GIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYW 364 G++KFETLSYLPPLS E+L KQ++YLI W+PCLEF + F++RE+N SPGYYDGRYW Sbjct: 67 GLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYW 126 Query: 365 TMWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 127 VMWKLPMFGCTDATQVL 143
>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 180 bits (457), Expect = 1e-45 Identities = 79/125 (63%), Positives = 101/125 (80%), Gaps = 1/125 (0%) Frame = +2 Query: 44 ASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLP 223 ++ A+ APF GLKS PV++++N SNGGR++CM+VWP G+KK+ETLSYLP Sbjct: 17 STQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLP 76 Query: 224 PLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTD 400 PLS EAL K++DYLIR+KW+PCLEF + GF++REH+ SPGYYDGRYWTMWKLPMFGCTD Sbjct: 77 PLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTD 136 Query: 401 ATQVL 415 + QV+ Sbjct: 137 SAQVM 141
>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (TSSU3-8) Length = 180 Score = 179 bits (455), Expect = 2e-45 Identities = 86/136 (63%), Positives = 102/136 (75%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 L S A+A + A VAPF GLKS A PVSR+ N SNGGR++CMQVWP Sbjct: 6 LSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 KK+ETLSYLP LS E LL +V+YL+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWT Sbjct: 66 KKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 179 bits (455), Expect = 2e-45 Identities = 86/136 (63%), Positives = 102/136 (75%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 L S A+A + A VAPF GLKS A PVSR+ N SNGGR++CMQVWP Sbjct: 6 LSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 KK+ETLSYLP LS E LL +V+YL+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWT Sbjct: 66 KKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A/3C) Length = 180 Score = 179 bits (454), Expect = 2e-45 Identities = 84/136 (61%), Positives = 104/136 (76%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 + S A+A + A+ VAPF GLKSTA PVSR+ N SNGGR+ CMQVWP Sbjct: 6 MSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 +KK+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE++ SPGYYDGRYWT Sbjct: 66 MKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 180 Score = 179 bits (453), Expect = 3e-45 Identities = 84/134 (62%), Positives = 103/134 (76%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S A+A + A+ VAPF GLKSTA PVSR+ N SNGGR+ CMQVWP +K Sbjct: 8 SAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMK 67 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMW 373 K+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE++ SPGYYDGRYWTMW Sbjct: 68 KYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMW 127 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTDATQVL Sbjct: 128 KLPMFGCTDATQVL 141
>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 179 bits (453), Expect = 3e-45 Identities = 82/134 (61%), Positives = 101/134 (75%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 +T MA + A VAPF GLKS + PV+R++N + SNGGR++CMQVWP G K Sbjct: 10 ATTMAAATTTAQANMVAPFNGLKSVSAFPVTRKNNDIT-SVASNGGRVQCMQVWPPLGKK 68 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMW 373 KFETLSYLPPLS E+L+K+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMW Sbjct: 69 KFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMW 128 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTD +QV+ Sbjct: 129 KLPMFGCTDPSQVV 142
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 178 bits (452), Expect = 4e-45 Identities = 82/137 (59%), Positives = 107/137 (78%), Gaps = 3/137 (2%) Frame = +2 Query: 17 STAMAPTVMAS--SATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 S+A TV + A+ VAPF GLKST G P +++++ + SNGGR++CM+VWP + Sbjct: 7 SSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDIT-SLASNGGRVQCMKVWPTQN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 +K++ETLSYLPPL+T+ L +QVDYL+ +KWVPCLEF + GF++REH+ SPGYYDGRYWT Sbjct: 66 MKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVLN 418 MWKLPMFGCTD QVLN Sbjct: 126 MWKLPMFGCTDPAQVLN 142
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) Length = 180 Score = 178 bits (452), Expect = 4e-45 Identities = 84/136 (61%), Positives = 102/136 (75%), Gaps = 3/136 (2%) Frame = +2 Query: 17 STAMAPTVMAS--SATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 S + T++AS AT VAPF GLKS+A P +R++N SNGGR+ CMQVWP G Sbjct: 4 SMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIG 63 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWT 367 KKFETLSYLP L+ L K+VDYLIR+KW+PC+EF + GF++REH SPGYYDGRYWT Sbjct: 64 KKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWT 123 Query: 368 MWKLPMFGCTDATQVL 415 MWKLP+FGCTD+ QVL Sbjct: 124 MWKLPLFGCTDSAQVL 139
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit S41) Length = 181 Score = 178 bits (452), Expect = 4e-45 Identities = 83/134 (61%), Positives = 103/134 (76%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 + A+A A+ A+ +APF GLKS PVSR+ N SNGGR++CMQVWP K Sbjct: 9 AAAVATGTNAAQASMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKK 68 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMW 373 K+ETLSYLP LS E LL++V+YL+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMW Sbjct: 69 KYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMW 128 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTDATQVL Sbjct: 129 KLPMFGCTDATQVL 142
>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 178 bits (451), Expect = 5e-45 Identities = 85/138 (61%), Positives = 104/138 (75%), Gaps = 3/138 (2%) Frame = +2 Query: 11 LHSTAMAPTVMASSATS--VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPI 184 + S +A AS A S VAPF LKST+ PV++++N SNGGR++CMQVWP Sbjct: 6 ISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPP 65 Query: 185 EGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 361 G+KKFETLSYLPPLS+E L K+VDYL+R +PCLEF + GF++REHN SPGYYDGRY Sbjct: 66 LGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRY 125 Query: 362 WTMWKLPMFGCTDATQVL 415 WTMWKLPMFGC D++QVL Sbjct: 126 WTMWKLPMFGCNDSSQVL 143
>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 177 bits (449), Expect = 9e-45 Identities = 83/133 (62%), Positives = 102/133 (76%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 STA + + V PF GL S+A PV+R+ +S SNG R+RCMQVWP EG K Sbjct: 8 STAAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFADSSK-LPSNGLRVRCMQVWPPEGKK 66 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 KFETLSYLPPL+ E L ++VDYLIR+ W+PC+EF KVGF++RE++ SPGYYDGRYWTMWK Sbjct: 67 KFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVL 415 LPMFGCTD++QVL Sbjct: 127 LPMFGCTDSSQVL 139
>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) (LESS 5) Length = 180 Score = 177 bits (448), Expect = 1e-44 Identities = 82/136 (60%), Positives = 104/136 (76%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 + S A+A + A+ VAPF GLKS+A PV+++ N SNGGR+ CMQVWP Sbjct: 6 ISSAAVATRSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPIN 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 +KK+ETLSYLP LS E LL +++YL+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWT Sbjct: 66 MKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 181 Score = 177 bits (448), Expect = 1e-44 Identities = 85/137 (62%), Positives = 105/137 (76%), Gaps = 2/137 (1%) Frame = +2 Query: 11 LHSTAMAPTVMASSATS-VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIE 187 + S A+A + A S +APF GLKS A PVSR+ N SNGGR+RCMQVWP Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 188 GIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYW 364 +KK+ETLSYLP L+ E LLK+V+YL+++ WVPCLEF ++ GF++RE++ SPGYYDGRYW Sbjct: 66 NMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYW 125 Query: 365 TMWKLPMFGCTDATQVL 415 TMWKLPMFGCTDATQVL Sbjct: 126 TMWKLPMFGCTDATQVL 142
>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 176 bits (445), Expect = 3e-44 Identities = 83/134 (61%), Positives = 100/134 (74%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S+ TV + A +VAPF GLKS AG P +R++N SNGGR++CMQVWP G K Sbjct: 7 SSPAVTTVNRAGAGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKK 65 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLP L L K+V+YL+R W+PCLEF + GF++REH+ SPGYYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMW 125 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTDA+QVL Sbjct: 126 KLPMFGCTDASQVL 139
>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 176 bits (445), Expect = 3e-44 Identities = 83/138 (60%), Positives = 105/138 (76%), Gaps = 3/138 (2%) Frame = +2 Query: 11 LHSTAMAPTVMASSATS--VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPI 184 + S A+ ASSA + VAPF GLKS+AG PV++++N SNGGR+ CMQVWP Sbjct: 4 ISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPP 63 Query: 185 EGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 361 G KKFETLSYLPPL+ E L K+V+YLIR W+PCLEF + GF++RE++ SPGYYDGRY Sbjct: 64 VGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRY 123 Query: 362 WTMWKLPMFGCTDATQVL 415 WTMW+LP+FG TD++QVL Sbjct: 124 WTMWRLPLFGATDSSQVL 141
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU8) Length = 180 Score = 176 bits (445), Expect = 3e-44 Identities = 82/136 (60%), Positives = 101/136 (74%), Gaps = 1/136 (0%) Frame = +2 Query: 11 LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 + S A+A + A+ VAPF GLKS PVS + N SNGGR++CMQVWP G Sbjct: 6 ISSAAVATRTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYG 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWT 367 KK+ETLSYLP L+ E LLK+++YL+ WVPCLEF ++ GF++RE++ASP YYDGRYWT Sbjct: 66 KKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTDATQVL Sbjct: 126 MWKLPMFGCTDATQVL 141
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 177 Score = 176 bits (445), Expect = 3e-44 Identities = 84/139 (60%), Positives = 103/139 (74%), Gaps = 2/139 (1%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 181 A + + A+ A+ A VAPF GLKST+ PVSR+SN +NGGR+ CMQVWP Sbjct: 2 ASLMSNAAVVTASTAAQANMVAPFSGLKSTSAFPVSRKSNVDITSLATNGGRVNCMQVWP 61 Query: 182 IEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVG--FIFREHNASPGYYDG 355 +KKFETLSYLP LS E+LLK+++YL+ WVPCLEF +VG ++RE+N SPGYYDG Sbjct: 62 PRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYRENNKSPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQV 412 RYWTMWKLPMFGCTDA+QV Sbjct: 121 RYWTMWKLPMFGCTDASQV 139
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 181 Score = 176 bits (445), Expect = 3e-44 Identities = 80/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%) Frame = +2 Query: 20 TAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKK 199 ++ A + AT VAPF GLKS+A PV+R++N SNGGR+ CM+VWP G KK Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKK 66 Query: 200 FETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWK 376 FETLSYLP LS L K+VDYL+R+KW+PC+EF + GF++REH +PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVL 415 LP+FGCTD+ QVL Sbjct: 127 LPLFGCTDSAQVL 139
>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 186 Score = 175 bits (444), Expect = 3e-44 Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 +T A + A+ VAPF GLKS + PV+R+S+ SNGG+++CMQVWP G K Sbjct: 12 ATTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKK 71 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMW 373 KFETLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMW Sbjct: 72 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMW 131 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTD +QV+ Sbjct: 132 KLPMFGCTDPSQVV 145
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 175 bits (444), Expect = 3e-44 Identities = 79/122 (64%), Positives = 97/122 (79%), Gaps = 1/122 (0%) Frame = +2 Query: 53 ATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLS 232 AT VAPF GLKS+A PV+R++N SNGGR+ CM+VWP G KKFETLSYLP LS Sbjct: 18 ATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLS 77 Query: 233 TEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQ 409 L K+VDYL+R+KW+PC+EF + GF++REH ++PGYYDGRYWTMWKLP+FGCTD+ Q Sbjct: 78 DVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQ 137 Query: 410 VL 415 VL Sbjct: 138 VL 139
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 175 bits (444), Expect = 3e-44 Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 1/133 (0%) Frame = +2 Query: 20 TAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKK 199 ++ A + AT VAPF GLKS++ PV+R++N VSNGGR+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKK 66 Query: 200 FETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWK 376 FETLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH ++PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVL 415 LP+FGCTD+ QVL Sbjct: 127 LPLFGCTDSAQVL 139
>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 175 bits (443), Expect = 4e-44 Identities = 81/139 (58%), Positives = 103/139 (74%), Gaps = 1/139 (0%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 181 A + + A+ + A+ VAPF GLKS + PV+++SN + SNGGR++CMQVWP Sbjct: 2 ASMMSNAAVVGRTTPAQASMVAPFTGLKSVSAFPVTKKSNDIT-SIASNGGRVQCMQVWP 60 Query: 182 IEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGR 358 G KKFETLSYLPPLS E+L+K+V YL+ + WVPCLEF GF++REH +PGYYDGR Sbjct: 61 PLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGR 120 Query: 359 YWTMWKLPMFGCTDATQVL 415 YWTMWKLPMFGCTD +QV+ Sbjct: 121 YWTMWKLPMFGCTDPSQVV 139
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 181 Score = 175 bits (443), Expect = 4e-44 Identities = 80/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%) Frame = +2 Query: 20 TAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKK 199 ++ A + AT VAPF GLKS+A PV+R++N SNGGR+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKK 66 Query: 200 FETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWK 376 FETLSYLP LS L K+VDYL+R+KW+PC+EF + GF++REH +PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVL 415 LP+FGCTD+ QVL Sbjct: 127 LPLFGCTDSAQVL 139
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit F1) Length = 181 Score = 175 bits (443), Expect = 4e-44 Identities = 79/133 (59%), Positives = 101/133 (75%), Gaps = 1/133 (0%) Frame = +2 Query: 20 TAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKK 199 ++ A + AT VAPF GLKS+A PV+R++N SNGGR+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPVGKKK 66 Query: 200 FETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWK 376 FETLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH ++PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVL 415 LP+FGCTD+ QVL Sbjct: 127 LPLFGCTDSAQVL 139
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1B) Length = 181 Score = 174 bits (442), Expect = 6e-44 Identities = 79/133 (59%), Positives = 100/133 (75%), Gaps = 1/133 (0%) Frame = +2 Query: 20 TAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKK 199 ++ A + AT VAPF GLKS+A PV+R++N SNGGR+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKK 66 Query: 200 FETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWK 376 FETLSYLP L+ L K+VDYL+R+KW+PC+EF + GF++REH +PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVL 415 LP+FGCTD+ QVL Sbjct: 127 LPLFGCTDSAQVL 139
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 174 bits (441), Expect = 8e-44 Identities = 79/127 (62%), Positives = 96/127 (75%), Gaps = 1/127 (0%) Frame = +2 Query: 38 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSY 217 V + AT VAPF GLKST P +R++N SNGG+++CM+VWP G+KKFETLSY Sbjct: 17 VSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSY 76 Query: 218 LPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGC 394 LPPL+ E L +V+YL+RS W+PCLEF + G ++REH PGYYDGRYWTMWKLPMFGC Sbjct: 77 LPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGC 136 Query: 395 TDATQVL 415 TDA QVL Sbjct: 137 TDAAQVL 143
>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 182 Score = 174 bits (441), Expect = 8e-44 Identities = 82/134 (61%), Positives = 101/134 (75%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 +T MA + A VAPF GLKS + PV+R++N + SNGGR++CM VWP G+K Sbjct: 10 ATTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDIT-SVASNGGRVQCM-VWPPLGMK 67 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMW 373 KFETLSYLPPLS E+LLK+V YL+ + WVPCLEF GF++REH +PGYYDGRYWTMW Sbjct: 68 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMW 127 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTD +QV+ Sbjct: 128 KLPMFGCTDPSQVV 141
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A) Length = 180 Score = 174 bits (441), Expect = 8e-44 Identities = 87/141 (61%), Positives = 104/141 (73%), Gaps = 3/141 (2%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATS--VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 175 A + S+A+ AS+ S VAPF GLKS G PV ++ N SNGGR++CMQV Sbjct: 2 ASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYD 352 WP G KKFETLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++REHN SPGYYD Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVL 415 GRYWTMWKLPMFG TDA+QVL Sbjct: 121 GRYWTMWKLPMFGTTDASQVL 141
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 173 bits (439), Expect = 1e-43 Identities = 84/134 (62%), Positives = 99/134 (73%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S+ TV + A VAPF GLKS AGLP +R++N SNGGR++CMQVWP G K Sbjct: 7 SSPAVTTVNRAGAGMVAPFTGLKSMAGLP-TRKTNNDITSIASNGGRVQCMQVWPPVGKK 65 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLP L L K+V+YL+R W+PCLEF + GF++REHN S GYYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMW 125 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTDA+QVL Sbjct: 126 KLPMFGCTDASQVL 139
>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 173 bits (439), Expect = 1e-43 Identities = 82/136 (60%), Positives = 103/136 (75%), Gaps = 3/136 (2%) Frame = +2 Query: 17 STAMAPTV--MASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 S+A TV + A+ VAPF GLKS A PV++++N + +NGGR++CMQVWP G Sbjct: 7 SSAAVATVNRTPAQASMVAPFNGLKSVAAFPVTKKNNDIT-SVATNGGRVQCMQVWPPLG 65 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWT 367 KKFETLSYLPPLS E+L+K+V YL+ + WVPCLEF GF++REH +PGYYDGRYWT Sbjct: 66 KKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWT 125 Query: 368 MWKLPMFGCTDATQVL 415 MWKLPMFGCTD +QV+ Sbjct: 126 MWKLPMFGCTDPSQVV 141
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3C) (PSS15) Length = 180 Score = 173 bits (439), Expect = 1e-43 Identities = 87/141 (61%), Positives = 103/141 (73%), Gaps = 3/141 (2%) Frame = +2 Query: 2 AIYLHSTAMAPTVMASSATS--VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 175 A + S+A+ AS S VAPF GLKS G PV ++ N SNGGR++CMQV Sbjct: 2 ASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYD 352 WP G KKFETLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++REHN SPGYYD Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVL 415 GRYWTMWKLPMFG TDA+QVL Sbjct: 121 GRYWTMWKLPMFGTTDASQVL 141
>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 187 Score = 173 bits (438), Expect = 2e-43 Identities = 83/136 (61%), Positives = 101/136 (74%), Gaps = 2/136 (1%) Frame = +2 Query: 17 STAMAPT-VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGI 193 STA T A+ A+ +A F GLKS A PV+R+ + SNGGR+ CM VWP Sbjct: 7 STATVATGANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINK 66 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTM 370 KK+ETLSYLP LS E LLK+++YL++ WVPCLEF ++ GF++REH+ SPGYYDGRYWTM Sbjct: 67 KKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTM 126 Query: 371 WKLPMFGCTDATQVLN 418 WKLPMFGCTDATQVLN Sbjct: 127 WKLPMFGCTDATQVLN 142
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 178 Score = 172 bits (437), Expect = 2e-43 Identities = 83/134 (61%), Positives = 98/134 (73%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S+ TV + A VAPF GLKS AG P +R++N SNGGR++CMQVWP G K Sbjct: 7 SSPAVTTVNRAGAGMVAPFTGLKSMAGFP-TRKTNNDITSIASNGGRVQCMQVWPPIGKK 65 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLP L L K+V+YL+R W+PCLEF + GF++REHN SP YYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMW 125 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTDA+QVL Sbjct: 126 KLPMFGCTDASQVL 139
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 171 bits (434), Expect = 5e-43 Identities = 80/134 (59%), Positives = 99/134 (73%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S A + A VAPF GLKS A P ++++N S SNGGR++CM+VWP G+K Sbjct: 7 SVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFST-LPSNGGRVQCMKVWPPLGLK 65 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 K+ETLSYLPPL+ L K+VDYL+R KWVPCLEF + GF++RE+ SPGYYDGRYWTMW Sbjct: 66 KYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMW 125 Query: 374 KLPMFGCTDATQVL 415 KLPMFGCTD+ QV+ Sbjct: 126 KLPMFGCTDSAQVM 139
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 171 bits (434), Expect = 5e-43 Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 1/134 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S+ TV + A +VAPF GLKS AG P +R++N SNGGR++CMQVWP G K Sbjct: 7 SSPAVTTVNRAGAGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKK 65 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLP L L K+V+YL+R W+PCLEF + GF++RE++ SPGYYDGRYWTMW Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMW 125 Query: 374 KLPMFGCTDATQVL 415 KLP+FGCTDA+QVL Sbjct: 126 KLPVFGCTDASQVL 139
>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 171 bits (433), Expect = 6e-43 Identities = 83/137 (60%), Positives = 101/137 (73%), Gaps = 4/137 (2%) Frame = +2 Query: 17 STAMAPTVMASS---ATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIE 187 S+A TV SS A VAPF GLKS + PV+R++N SNGGR++CMQVWP Sbjct: 7 SSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPL 66 Query: 188 GIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYW 364 G KKFETLSYLP L+ L K+VDYL+RSKW+PCLEF + GF+ R++++ P YYDGRYW Sbjct: 67 GKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYW 126 Query: 365 TMWKLPMFGCTDATQVL 415 TMWKLPMFGCTD+ QVL Sbjct: 127 TMWKLPMFGCTDSAQVL 143
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 169 bits (428), Expect = 2e-42 Identities = 79/138 (57%), Positives = 105/138 (76%), Gaps = 3/138 (2%) Frame = +2 Query: 11 LHSTAMAPTVMAS--SATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPI 184 L S A+A AS A+ VAPF GLKS+AG P++R++N SN G+++CM+VWP Sbjct: 6 LSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPP 65 Query: 185 EGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 361 G++KFETLSYLP +S E L K+ DYL+R+ WVPC+EF GF++RE++ SPG+YDGRY Sbjct: 66 LGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRY 125 Query: 362 WTMWKLPMFGCTDATQVL 415 WTMWKLPMFGCTD++QV+ Sbjct: 126 WTMWKLPMFGCTDSSQVI 143
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 184 Score = 169 bits (428), Expect = 2e-42 Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 1/135 (0%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 + A+A T + A VAPF GLKS A PV+R+SN + SNGGR++CMQVWP G K Sbjct: 12 AVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSNDIT-SIASNGGRVQCMQVWPPVGKK 70 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLPPLS LL QV YL+ W+PC+EF + F++RE++ SPGY DGRYWTMW Sbjct: 71 KFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMW 130 Query: 374 KLPMFGCTDATQVLN 418 KLPM+GCTD QVLN Sbjct: 131 KLPMYGCTDPAQVLN 145
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 169 bits (428), Expect = 2e-42 Identities = 77/124 (62%), Positives = 95/124 (76%), Gaps = 1/124 (0%) Frame = +2 Query: 47 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 226 + A+ VAPF GLKST+ P +R++ SNGGR++CMQVWP G K +ETLSYLPP Sbjct: 20 AQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPP 79 Query: 227 LSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDA 403 L+ E L K+V+YL+R WVPCLEF + G ++RE++ SPGYYDGRYWTMWKLPMFGCTDA Sbjct: 80 LTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDA 139 Query: 404 TQVL 415 QVL Sbjct: 140 VQVL 143
>RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 171 Score = 169 bits (428), Expect = 2e-42 Identities = 82/135 (60%), Positives = 100/135 (74%), Gaps = 4/135 (2%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLG----SVSNGGRIRCMQVWPIEGI 193 MA A +AT V+ F GLKSTA P S + + A+ + SNGGR+RCMQVWP G Sbjct: 1 MATGAGAGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGN 60 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 KFETLSYLP L+ E L+K+V+YL+R+KWVPCLEF G I R++N SPGYYDGRYW MW Sbjct: 61 PKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMW 120 Query: 374 KLPMFGCTDATQVLN 418 KLPMFGCT+A+QV+N Sbjct: 121 KLPMFGCTEASQVIN 135
>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 180 Score = 168 bits (426), Expect = 4e-42 Identities = 84/139 (60%), Positives = 101/139 (72%), Gaps = 3/139 (2%) Frame = +2 Query: 11 LHSTAMAPTVMASSATS--VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPI 184 L S A+ V AS A + VAPF GLKS A PV+R+SN + SNGGR++CMQVWP Sbjct: 5 LMSNAITAVVGASGAQANMVAPFNGLKSIASFPVTRKSNDIT-SIASNGGRVQCMQVWPP 63 Query: 185 EGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 361 G KKFETLSYLPPLS LL QV YL+ + W+PC+EF + F++RE++ SPGY DGRY Sbjct: 64 VGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRY 123 Query: 362 WTMWKLPMFGCTDATQVLN 418 WTMWKLPM+GCTD QVLN Sbjct: 124 WTMWKLPMYGCTDPAQVLN 142
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 173 Score = 168 bits (425), Expect = 5e-42 Identities = 81/129 (62%), Positives = 101/129 (78%), Gaps = 2/129 (1%) Frame = +2 Query: 35 TVMASSATS-VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETL 211 TV A T+ VAPF GLK+ A PV+++ NG S SNGGR++CM+VWP G KK+ETL Sbjct: 7 TVAAVPQTNMVAPFTGLKANAAFPVTKKVNGFST-LPSNGGRVQCMKVWPPVGKKKYETL 65 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMF 388 SYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ +SPGYYDGRYWTMWKLPMF Sbjct: 66 SYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMF 125 Query: 389 GCTDATQVL 415 GCTD+ QV+ Sbjct: 126 GCTDSAQVM 134
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 166 bits (421), Expect = 2e-41 Identities = 80/138 (57%), Positives = 102/138 (73%), Gaps = 3/138 (2%) Frame = +2 Query: 11 LHSTAMAPTVMAS--SATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPI 184 L S+A T+ + A PF GLKS+AG PV++++N + SNG R+ CMQVWP Sbjct: 3 LISSAAVTTINRAPVQANLATPFTGLKSSAGFPVTKKNNDIT-SITSNGSRVNCMQVWPP 61 Query: 185 EGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 361 G KKFETLSYLPPL+ E LLK+V+YL+R WVPC+EF + GF+ R++N+SPGYYDGRY Sbjct: 62 VGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRY 121 Query: 362 WTMWKLPMFGCTDATQVL 415 WTMW+LP+FG TDA QVL Sbjct: 122 WTMWRLPLFGTTDAAQVL 139
>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 183 Score = 166 bits (420), Expect = 2e-41 Identities = 80/139 (57%), Positives = 99/139 (71%), Gaps = 3/139 (2%) Frame = +2 Query: 11 LHSTAMAPTVMASSATS--VAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPI 184 L + AMA T + A + VAPF GLKS A P++++S+ SNGGR++CMQVWP Sbjct: 6 LSNAAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPP 65 Query: 185 EGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRY 361 G KKFETLSYLPPLS LL QV YL+ W+PC+EF + F++RE++ SPGY DGRY Sbjct: 66 VGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRY 125 Query: 362 WTMWKLPMFGCTDATQVLN 418 WTMWKLPM+GCTD QVLN Sbjct: 126 WTMWKLPMYGCTDPAQVLN 144
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) Length = 173 Score = 166 bits (419), Expect = 3e-41 Identities = 78/130 (60%), Positives = 97/130 (74%), Gaps = 1/130 (0%) Frame = +2 Query: 29 APTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFET 208 A + A VAPF GLKS A PV+++ N S SNGGR++CM+VWP G K++ET Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFST-LASNGGRVQCMKVWPPLGKKRYET 64 Query: 209 LSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPM 385 LSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVL 415 FGCTD+ QV+ Sbjct: 125 FGCTDSAQVM 134
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 173 Score = 166 bits (419), Expect = 3e-41 Identities = 78/130 (60%), Positives = 97/130 (74%), Gaps = 1/130 (0%) Frame = +2 Query: 29 APTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFET 208 A + A VAPF GLKS A PV+++ N S SNGGR++CM+VWP G K++ET Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFST-LPSNGGRVQCMKVWPPLGKKRYET 64 Query: 209 LSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPM 385 LSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVL 415 FGCTD+ QV+ Sbjct: 125 FGCTDSAQVM 134
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 165 bits (418), Expect = 4e-41 Identities = 77/124 (62%), Positives = 96/124 (77%), Gaps = 1/124 (0%) Frame = +2 Query: 47 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 226 + A VAPF GLKS A P ++++N S SNGGR++CM+VWP G KK+ETLSYLP Sbjct: 17 AQANMVAPFTGLKSNAAFPATKKANDFST-LPSNGGRVQCMKVWPPLGKKKYETLSYLPN 75 Query: 227 LSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDA 403 L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ Sbjct: 76 LTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDS 135 Query: 404 TQVL 415 QV+ Sbjct: 136 AQVM 139
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 173 Score = 165 bits (418), Expect = 4e-41 Identities = 78/130 (60%), Positives = 97/130 (74%), Gaps = 1/130 (0%) Frame = +2 Query: 29 APTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFET 208 A + A VAPF GLK+ A PV+++ N S SNGGR++CM+VWP G KK+ET Sbjct: 6 ATVATVAQANMVAPFTGLKANAAFPVTKKVNDFST-LPSNGGRVQCMKVWPPLGKKKYET 64 Query: 209 LSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPM 385 LSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVL 415 FGCTD+ QV+ Sbjct: 125 FGCTDSAQVM 134
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 173 Score = 165 bits (417), Expect = 5e-41 Identities = 78/130 (60%), Positives = 97/130 (74%), Gaps = 1/130 (0%) Frame = +2 Query: 29 APTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFET 208 A + A VAPF GLKS A PV+++ N S SNGGR++CM+VWP G K++ET Sbjct: 6 ATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFST-LPSNGGRVQCMKVWPPLGKKRYET 64 Query: 209 LSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPM 385 LSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVL 415 FGCTD+ QV+ Sbjct: 125 FGCTDSAQVM 134
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 173 Score = 163 bits (412), Expect = 2e-40 Identities = 77/130 (59%), Positives = 96/130 (73%), Gaps = 1/130 (0%) Frame = +2 Query: 29 APTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFET 208 A + A VAPF GLK+ A PV+++ N S SNGGR++CM+VWP G KK+ T Sbjct: 6 ATVAAVAQANMVAPFTGLKANAAFPVTKKVNDFST-LPSNGGRVQCMKVWPPLGKKKYXT 64 Query: 209 LSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPM 385 LSYLP L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVL 415 FGCTD+ QV+ Sbjct: 125 FGCTDSVQVM 134
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 178 Score = 162 bits (411), Expect = 2e-40 Identities = 75/124 (60%), Positives = 95/124 (76%), Gaps = 1/124 (0%) Frame = +2 Query: 47 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPP 226 + A VAPF GLKS P ++++N S SNGGR++CM+VWP G K++ETLSYLP Sbjct: 17 AQANMVAPFTGLKSNVAFPATKKANDFST-LPSNGGRVQCMKVWPPLGKKRYETLSYLPN 75 Query: 227 LSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDA 403 L+ L K+VDYL+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ Sbjct: 76 LTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDS 135 Query: 404 TQVL 415 QV+ Sbjct: 136 AQVM 139
>RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 160 bits (404), Expect = 1e-39 Identities = 82/144 (56%), Positives = 98/144 (68%), Gaps = 8/144 (5%) Frame = +2 Query: 11 LHSTAMAPTVMASSATS----VAPFQGLKSTAGLPVSRRSNGASLG----SVSNGGRIRC 166 L STA V A S T V+ F GLKS A P S+ + A + SNG R+RC Sbjct: 8 LSSTAAVAAVAAPSKTGNSNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRC 67 Query: 167 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 346 MQVWP KKFETLSYLP L+ E L+K+V+YL+++KWVPCLEF + G I R + SPGY Sbjct: 68 MQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNSPGY 127 Query: 347 YDGRYWTMWKLPMFGCTDATQVLN 418 YDGRYW MWKLPMFGCT+A+QVLN Sbjct: 128 YDGRYWVMWKLPMFGCTEASQVLN 151
>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512| (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 Score = 150 bits (380), Expect = 9e-37 Identities = 67/69 (97%), Positives = 69/69 (100%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 +YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 60 Query: 392 CTDATQVLN 418 CTDATQV+N Sbjct: 61 CTDATQVIN 69
>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1) (Fragment) Length = 136 Score = 143 bits (361), Expect = 1e-34 Identities = 64/92 (69%), Positives = 75/92 (81%), Gaps = 1/92 (1%) Frame = +2 Query: 143 SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV-GFIF 319 SNG R++CMQVWP G KKFETLSYLPPL+ + LLK+V+YL+R WVPCLEF + GF++ Sbjct: 6 SNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVY 65 Query: 320 REHNASPGYYDGRYWTMWKLPMFGCTDATQVL 415 EHN SP YYDGRYWTMWKLPMFG TD QV+ Sbjct: 66 GEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVV 97
>RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 138 bits (347), Expect = 6e-33 Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 2/135 (1%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLP--VSRRSNGASLGSVSNGGRIRCMQVWPIEG 190 S A+ AS+A++ Q + AGL V + + +NG R+ CMQVW Sbjct: 7 SAAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYN 66 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 370 KFETLSYLPPLS +AL KQ+DY+I+S W PC+EF G + RE + PGYYDGRYWTM Sbjct: 67 NLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTM 126 Query: 371 WKLPMFGCTDATQVL 415 WKLPMFGCTD+ VL Sbjct: 127 WKLPMFGCTDSASVL 141
>RBS1_SPIOL (P00870) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 123 Score = 132 bits (331), Expect = 4e-31 Identities = 60/85 (70%), Positives = 70/85 (82%), Gaps = 1/85 (1%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPG 343 MQVWP G+KKFETLSYLPPL+TE LL +V+YL+ W+P LEF K GF++REH+ SPG Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPG 60 Query: 344 YYDGRYWTMWKLPMFGCTDATQVLN 418 YYDGRYWTMWKLPMFG TD QV+N Sbjct: 61 YYDGRYWTMWKLPMFGGTDPAQVVN 85
>RBS3_ACECL (P16131) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 102 bits (255), Expect = 3e-22 Identities = 55/121 (45%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Frame = +2 Query: 83 KSTAGLPVSRRSNGASLGSVSNGGRIRC--MQVWPIEGIKKFETLSYLPPLSTEALLKQV 256 K A P R+ + G SN +C M VW K FET SYLPPL+ E + KQV Sbjct: 14 KEVAKTPNFPRATKNNKGFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQV 73 Query: 257 DYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLPMFGCTDATQVL 415 DY++ + W PCLEF+ + R S Y D RYWTMWKLPMFGCTD +QVL Sbjct: 74 DYILANSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVL 133 Query: 416 N 418 + Sbjct: 134 S 134
>RBS_CHLMO (P17537) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 102 bits (253), Expect = 5e-22 Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 7/89 (7%) Frame = +2 Query: 170 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REH 328 +VW K++ET SYLPPL+ + + +QVDY+I + W PCLEF+ F R Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQ 89 Query: 329 NASPGYYDGRYWTMWKLPMFGCTDATQVL 415 S GYYD RYWTMWKLPMFGCTD +QVL Sbjct: 90 GVSAGYYDNRYWTMWKLPMFGCTDPSQVL 118
>RBS2_CHLRE (P08475) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 185 Score = 100 bits (250), Expect = 1e-21 Identities = 55/133 (41%), Positives = 73/133 (54%), Gaps = 7/133 (5%) Frame = +2 Query: 38 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSY 217 V+A S+ S A + +S+ P++ V+ + M VW K FET SY Sbjct: 4 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 62 Query: 218 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWK 376 LPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWK Sbjct: 63 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 122 Query: 377 LPMFGCTDATQVL 415 LPMFGC D QVL Sbjct: 123 LPMFGCRDPMQVL 135
>RBS_BATOE (P26985) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 100 bits (250), Expect = 1e-21 Identities = 50/101 (49%), Positives = 63/101 (62%), Gaps = 9/101 (8%) Frame = +2 Query: 140 VSNG--GRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKV 307 +SNG + R M VW K FET SYLPPL+ + + KQVDY++R+ W PCLEF S Sbjct: 25 LSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQ 84 Query: 308 GFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVL 415 ++ ++ G Y D RYWTMWKLPMFGC D +QVL Sbjct: 85 AYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVL 125
>RBS1_CHLRE (P00873) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 185 Score = 100 bits (249), Expect = 1e-21 Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 7/133 (5%) Frame = +2 Query: 38 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSY 217 V+A S+ S A + +S+ P++ V+ + M VW K FET SY Sbjct: 4 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 62 Query: 218 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWK 376 LPPL+ E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWK Sbjct: 63 LPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWK 122 Query: 377 LPMFGCTDATQVL 415 LPMFGC D QVL Sbjct: 123 LPMFGCRDPMQVL 135
>RBS_EUGGR (P16881) Ribulose bisphosphate carboxylase small chains, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunits) [Contains: Ribulose bisphosphate carboxylase small chain P1; Ribulose bisphosphate carboxylase small chain P2; Ribulose bispho Length = 1273 Score = 99.4 bits (246), Expect = 3e-21 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 7/107 (6%) Frame = +2 Query: 116 SNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 295 S+ +S G + G + M+VW KKFET SYLPPLS + KQVD +I PCLE Sbjct: 981 SSSSSWGMAAMTGE-KDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLE 1039 Query: 296 FS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVL 415 F+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL Sbjct: 1040 FAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVL 1086 Score = 99.4 bits (246), Expect = 3e-21 Identities = 55/110 (50%), Positives = 68/110 (61%), Gaps = 7/110 (6%) Frame = +2 Query: 107 SRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVP 286 S S+ +S G + G + M+VW KKFET SYLPPLS + KQVD +I P Sbjct: 835 SGSSSSSSWGMAAMTGE-KEMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSP 893 Query: 287 CLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVL 415 CLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL Sbjct: 894 CLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVL 943 Score = 99.4 bits (246), Expect = 3e-21 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 7/107 (6%) Frame = +2 Query: 116 SNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 295 S+ +S G + G + M+VW KKFET SYLPPLS + KQVD +I PCLE Sbjct: 550 SSSSSWGMAAMTGE-KDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLE 608 Query: 296 FS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVL 415 F+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL Sbjct: 609 FAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVL 655 Score = 99.4 bits (246), Expect = 3e-21 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 7/107 (6%) Frame = +2 Query: 116 SNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 295 S+ +S G + G + M+VW KKFET SYLPPLS + KQVD +I PCLE Sbjct: 263 SSSSSWGMAAMTGE-KDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLE 321 Query: 296 FS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVL 415 F+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL Sbjct: 322 FAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVL 368 Score = 99.0 bits (245), Expect = 4e-21 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 7/107 (6%) Frame = +2 Query: 116 SNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLE 295 S+ +S G + G + M+VW KKFET SYLPPLS + KQVD +I PCLE Sbjct: 1125 SSSSSWGMAAMTGE-KEMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLE 1183 Query: 296 FS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVL 415 F+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL Sbjct: 1184 FAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVL 1230 Score = 98.6 bits (244), Expect = 5e-21 Identities = 54/111 (48%), Positives = 67/111 (60%), Gaps = 7/111 (6%) Frame = +2 Query: 104 VSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWV 283 V R S +S ++ + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 688 VQRPSGSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 747 Query: 284 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVL 415 PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL Sbjct: 748 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVL 798 Score = 98.2 bits (243), Expect = 7e-21 Identities = 50/90 (55%), Positives = 59/90 (65%), Gaps = 7/90 (7%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS--KVGFIFREHNA-- 334 M+VW KKFET SYLPPLS + KQVD +I PCLEF+ + FI ++ Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 194 Query: 335 ---SPGYYDGRYWTMWKLPMFGCTDATQVL 415 + GYYD RYWTMWKLPMFGCTDA+QVL Sbjct: 195 SGTAAGYYDNRYWTMWKLPMFGCTDASQVL 224 Score = 96.7 bits (239), Expect = 2e-20 Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 7/111 (6%) Frame = +2 Query: 104 VSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWV 283 V R S +S ++ + M+VW KKFET SYLPPLS + KQVD +I Sbjct: 401 VQRPSGSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 460 Query: 284 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVL 415 PCLEF+ + FI ++ + GYYD YWTMWKLPMFGCTDA+QVL Sbjct: 461 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVL 511
>RBS6_ACECL (Q38692) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) (rbcS4) Length = 182 Score = 98.6 bits (244), Expect = 5e-21 Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 9/139 (6%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRI--RCMQVWPIEGIKK 199 MA T+M+ + S P++ + G V+ I R M VW K Sbjct: 1 MAATMMSKTIIS-------SKQCSKPIAPPKVSINKGFVNTSAAIKNREMMVWQPFNNKM 53 Query: 200 FETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGR 358 FET SYLPPL+ E + KQVDY++ + W PCLEF S + E+ + G Y D R Sbjct: 54 FETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNR 113 Query: 359 YWTMWKLPMFGCTDATQVL 415 YWTMWKLPMFGCTD +QVL Sbjct: 114 YWTMWKLPMFGCTDGSQVL 132
>RBS7_ACECL (Q38693) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) (rbcS1) Length = 183 Score = 98.6 bits (244), Expect = 5e-21 Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 10/107 (9%) Frame = +2 Query: 128 SLGSVSNGG---RIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF 298 S G N G + R M VW K FET SYLPPL+ E + KQVDY++ + W PCLEF Sbjct: 28 SRGGFLNSGIMKKDRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEF 87 Query: 299 --SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLN 418 S + E+ G Y D RYWTMWKLPMFGCTD +QVL+ Sbjct: 88 AASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLS 134
>RBS4_ACECL (P16132) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 97.8 bits (242), Expect = 9e-21 Identities = 58/138 (42%), Positives = 75/138 (54%), Gaps = 7/138 (5%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MA T+M + V +G + +P + L + N + R M VW K FE Sbjct: 1 MAATMMNKT---VVLSKGCTKPSAVPKVSINRKGFLNTAMN--KKREMMVWQPFNNKMFE 55 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYW 364 T SYLPPL+ E + KQVDY++ + W PCLEF S + E+ G Y D RYW Sbjct: 56 TFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 115 Query: 365 TMWKLPMFGCTDATQVLN 418 TMWKLPMFGCTD +QVL+ Sbjct: 116 TMWKLPMFGCTDGSQVLS 133
>RBS5_ACECL (P16133) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 184 Score = 97.8 bits (242), Expect = 9e-21 Identities = 58/138 (42%), Positives = 74/138 (53%), Gaps = 7/138 (5%) Frame = +2 Query: 26 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 205 MA +M + T V G ++ +P +N S + R M VW K FE Sbjct: 1 MAAAMM--NKTIVVSKDGCARSSSIP-KVATNKMGFASAVAMKKSREMMVWQPFNNKMFE 57 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYW 364 T SYLPPL+ E + KQVDY++ + W PCLEF S + E+ G Y D RYW Sbjct: 58 TFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 117 Query: 365 TMWKLPMFGCTDATQVLN 418 TMWKLPMFGCTD +QVL+ Sbjct: 118 TMWKLPMFGCTDGSQVLS 135
>RBS3_ACEME (P16136) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 182 Score = 97.1 bits (240), Expect = 2e-20 Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 7/93 (7%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 334 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 41 RGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCI 100 Query: 335 SPG-----YYDGRYWTMWKLPMFGCTDATQVLN 418 G Y D RYWTMWKLPMFGCTDA+QVL+ Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFGCTDASQVLS 133
>RBS4_ACEME (P16137) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 96.3 bits (238), Expect = 3e-20 Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 7/118 (5%) Frame = +2 Query: 86 STAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYL 265 +T + S+RS +++ + + R M VW K FET S+LPPL+ E + KQVDY+ Sbjct: 21 ATPKVVTSKRSFASTVANKN-----REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYI 75 Query: 266 IRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLN 418 + + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL+ Sbjct: 76 LANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLS 133
>RBS5_ACEME (P16138) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 183 Score = 96.3 bits (238), Expect = 3e-20 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 7/93 (7%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 334 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 42 RDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101 Query: 335 SPG-----YYDGRYWTMWKLPMFGCTDATQVLN 418 G Y D RYWTMWKLPMFGCTD +QVL+ Sbjct: 102 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLS 134
>RBS2_ACEME (P16135) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) (Fragment) Length = 173 Score = 95.9 bits (237), Expect = 3e-20 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 7/93 (7%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 334 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 32 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 91 Query: 335 SPG-----YYDGRYWTMWKLPMFGCTDATQVLN 418 G Y D RYWTMWKLPMFGCTD +QVL+ Sbjct: 92 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLS 124
>RBS1_ACEME (P16134) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 95.9 bits (237), Expect = 3e-20 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 7/93 (7%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF--SKVGFIFREHNA 334 R M VW K FET S+LPPL+ E + KQVDY++ + W PCLEF S + E+ Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 100 Query: 335 SPG-----YYDGRYWTMWKLPMFGCTDATQVLN 418 G Y D RYWTMWKLPMFGCTD +QVL+ Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLS 133
>RBS1_ACECL (P16129) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) (Fragment) Length = 126 Score = 85.1 bits (209), Expect = 6e-17 Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 7/76 (9%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHN-------ASPGYYDGRYWTM 370 SYLPPL+ E + KQVDY++ + W PCLEF+ + ++ + Y D RYWTM Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTM 61 Query: 371 WKLPMFGCTDATQVLN 418 WKLPMFGCTD +QVL+ Sbjct: 62 WKLPMFGCTDGSQVLS 77
>RBS_SINAL (P13951) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 82 Score = 75.9 bits (185), Expect = 4e-14 Identities = 28/36 (77%), Positives = 34/36 (94%) Frame = +2 Query: 308 GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVL 415 GF++REH ++PGYYDGRYWTMWKLP+FGCTD+ QVL Sbjct: 5 GFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVL 40
>RBS_PROHO (P27569) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 65.1 bits (157), Expect = 6e-11 Identities = 29/74 (39%), Positives = 49/74 (66%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +++ETLSYLPPLS + + +Q++Y++R ++P +EF++ + +A+ YWTMW Sbjct: 8 RRYETLSYLPPLSDQQIARQIEYMVREGYIPAVEFNE------DSDATT-----CYWTMW 56 Query: 374 KLPMFGCTDATQVL 415 KLP+F T +VL Sbjct: 57 KLPLFHATSTQEVL 70
>RBS_SYNP2 (Q44178) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 111 Score = 64.3 bits (155), Expect = 1e-10 Identities = 30/75 (40%), Positives = 48/75 (64%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 K++ETLSYLPPLS + + +QV Y++ ++P +EF K + +P + +WT+W Sbjct: 8 KRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEK--------DPTPELH---HWTLW 56 Query: 374 KLPMFGCTDATQVLN 418 KLP+F + A +VLN Sbjct: 57 KLPLFNASSAQEVLN 71
>RBS_SYNP6 (P04716) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 63.9 bits (154), Expect = 1e-10 Identities = 31/75 (41%), Positives = 44/75 (58%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 ++FET SYLPPLS + Q++Y+I + P +EF+ EH+ + YWTMW Sbjct: 9 RRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFN-------EHSNPEEF----YWTMW 57 Query: 374 KLPMFGCTDATQVLN 418 KLP+F C QVL+ Sbjct: 58 KLPLFDCKSPQQVLD 72
>RBS_ALVHS (P24682) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 121 Score = 63.9 bits (154), Expect = 1e-10 Identities = 32/74 (43%), Positives = 40/74 (54%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +KFET SYLP L E + KQV+Y++ W P + EH +D YW MW Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAV----------EHTEPENAFD-HYWYMW 65 Query: 374 KLPMFGCTDATQVL 415 KLPMFG TD +L Sbjct: 66 KLPMFGETDVDAIL 79
>RBS_THIDA (Q56260) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 62.8 bits (151), Expect = 3e-10 Identities = 30/74 (40%), Positives = 41/74 (55%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +KFET SYLP ++ + KQV+YL+ W P +E + P + YW MW Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE-----------HTEPEHLMDSYWYMW 65 Query: 374 KLPMFGCTDATQVL 415 KLPMFG TD ++L Sbjct: 66 KLPMFGETDIDRIL 79
>RBS_PSEHY (Q51857) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 124 Score = 62.4 bits (150), Expect = 4e-10 Identities = 29/74 (39%), Positives = 41/74 (55%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 K+FET SYLP +S E + KQ++Y++ W P +E + P YW MW Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE-----------HCEPENAILHYWYMW 72 Query: 374 KLPMFGCTDATQVL 415 KLPMFG TD +++ Sbjct: 73 KLPMFGETDVDKII 86
>RBS2_THIFE (Q07088) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 118 Score = 62.4 bits (150), Expect = 4e-10 Identities = 31/73 (42%), Positives = 40/73 (54%) Frame = +2 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 KFETLSYLP L+ + + +QV Y++ W P +E + P G YW MWK Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE-----------HTEPENAFGNYWYMWK 66 Query: 377 LPMFGCTDATQVL 415 LPMFG TD +L Sbjct: 67 LPMFGETDVDTIL 79
>RBS_ANASP (P06514) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 62.4 bits (150), Expect = 4e-10 Identities = 33/83 (39%), Positives = 50/83 (60%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 346 MQ P E +++ETLSYLPPL+ + KQV Y++ ++P +EF++V + P Sbjct: 1 MQTLPKE--RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEV--------SEP-- 48 Query: 347 YDGRYWTMWKLPMFGCTDATQVL 415 YWT+WKLP+FG + +VL Sbjct: 49 -TELYWTLWKLPLFGAKTSREVL 70
>RBS_SYNY3 (P54206) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 62.0 bits (149), Expect = 5e-10 Identities = 30/74 (40%), Positives = 46/74 (62%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +++ETLSYLPPL+ + + KQV++L+ ++P +EF E + P + +WTMW Sbjct: 8 RRYETLSYLPPLTDQQIAKQVEFLLDQGFIPGVEF--------EEDPQP---ETHFWTMW 56 Query: 374 KLPMFGCTDATQVL 415 KLP FG A +VL Sbjct: 57 KLPFFGGATANEVL 70
>RBS1_HYDMR (Q59459) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 61.6 bits (148), Expect = 7e-10 Identities = 32/74 (43%), Positives = 41/74 (55%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +K ET SYLP ++T+ + QV+Y+I W P +E S+ P YW MW Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIEHSE-----------PENAFSYYWYMW 65 Query: 374 KLPMFGCTDATQVL 415 KLPMFG TDA VL Sbjct: 66 KLPMFGDTDANVVL 79
>RBS1_CHRVI (P22850) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 61.6 bits (148), Expect = 7e-10 Identities = 30/74 (40%), Positives = 40/74 (54%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +KFET SYLP + + + KQV+Y++ W P + EH +D YW MW Sbjct: 16 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAI----------EHTEPENAFD-HYWYMW 64 Query: 374 KLPMFGCTDATQVL 415 KLPMFG TD +L Sbjct: 65 KLPMFGETDIDTIL 78
>RBS_CYAPA (P18062) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 106 Score = 57.8 bits (138), Expect = 1e-08 Identities = 27/75 (36%), Positives = 42/75 (56%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +KFET SYLPPL+ + + +Q+ Y + + + P +EFS G + WT+W Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEFS-----------FTGKAEDLVWTLW 55 Query: 374 KLPMFGCTDATQVLN 418 KLP+FG +VL+ Sbjct: 56 KLPLFGAQSPEEVLS 70
>RBS_RHOCA (O32741) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 56.2 bits (134), Expect = 3e-08 Identities = 26/74 (35%), Positives = 40/74 (54%) Frame = +2 Query: 194 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 373 +K T SYLPP+ + +QV++++++ W P +E + P + YW MW Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE-----------HTEPDFAAQIYWYMW 65 Query: 374 KLPMFGCTDATQVL 415 KLPMFG TD +L Sbjct: 66 KLPMFGETDVDAIL 79
>RBS2_CHRVI (P22860) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 113 Score = 53.9 bits (128), Expect = 1e-07 Identities = 29/75 (38%), Positives = 40/75 (53%) Frame = +2 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 370 I ++ET SYLPPL+ E +L+Q+ Y++ + W LE EH Y YW M Sbjct: 13 IGRYETFSYLPPLNREEILEQILYILDNGWNASLE--------HEHPDRAFEY---YWPM 61 Query: 371 WKLPMFGCTDATQVL 415 WK+P FG D +L Sbjct: 62 WKMPFFGEQDPNVIL 76
>RBS_NITVU (Q59614) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 108 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/75 (36%), Positives = 40/75 (53%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 346 M V +KK+ET SYLP ++ E + +Q+ + I W P +E ++ G +P Sbjct: 1 MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKG--------TPA- 51 Query: 347 YDGRYWTMWKLPMFG 391 YW MWKLP+FG Sbjct: 52 -KASYWYMWKLPLFG 65
>RBS2_HYDMR (Q59461) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 122 Score = 53.5 bits (127), Expect = 2e-07 Identities = 26/71 (36%), Positives = 34/71 (47%) Frame = +2 Query: 203 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 382 ET S+LP + + + Q+ Y+I W P LE + +P YW MWKLP Sbjct: 15 ETFSFLPEFTADEIYDQIVYIINQGWTPALE-----------HEAPEAASSHYWGMWKLP 63 Query: 383 MFGCTDATQVL 415 MFG D VL Sbjct: 64 MFGTRDPNAVL 74
>RBS_THINE (P45686) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 52.8 bits (125), Expect = 3e-07 Identities = 28/73 (38%), Positives = 38/73 (52%) Frame = +2 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 K+ET SYLPP++ E + Q+ Y I W P +E +V N+ +YW MWK Sbjct: 12 KYETFSYLPPMNAERIRAQIKYAIAQGWSPGIEHVEV------KNSM-----NQYWYMWK 60 Query: 377 LPMFGCTDATQVL 415 LP FG + VL Sbjct: 61 LPFFGEQNVDNVL 73
>RBS1_THIFE (P28896) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 110 Score = 52.8 bits (125), Expect = 3e-07 Identities = 26/65 (40%), Positives = 33/65 (50%) Frame = +2 Query: 197 KFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWK 376 K+ET SYLP + E + +Q+ YLI W P +E + P YW MWK Sbjct: 12 KYETFSYLPAMGPEKMRRQIAYLINQGWNPGIE-----------HVEPERASTYYWYMWK 60 Query: 377 LPMFG 391 LPMFG Sbjct: 61 LPMFG 65
>RBS2_ACECL (P16130) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) (Fragment) Length = 86 Score = 52.8 bits (125), Expect = 3e-07 Identities = 21/28 (75%), Positives = 23/28 (82%) Frame = +2 Query: 335 SPGYYDGRYWTMWKLPMFGCTDATQVLN 418 S Y D RYWTMWKLPMFGCTD +QVL+ Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLS 37
>RBS_SYNPX (P0A4S5) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/76 (28%), Positives = 35/76 (46%) Frame = +2 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 370 + ET +LPP++ + + Q+ Y+I W P +E + P YW+ Sbjct: 13 VATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE-----------HVHPSNSMATYWSY 61 Query: 371 WKLPMFGCTDATQVLN 418 WKLP FG D V++ Sbjct: 62 WKLPFFGEKDLNVVVS 77
>RBS_SYNPW (P0A4S6) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/76 (28%), Positives = 35/76 (46%) Frame = +2 Query: 191 IKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTM 370 + ET +LPP++ + + Q+ Y+I W P +E + P YW+ Sbjct: 13 VATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE-----------HVHPSNSMATYWSY 61 Query: 371 WKLPMFGCTDATQVLN 418 WKLP FG D V++ Sbjct: 62 WKLPFFGEKDLNVVVS 77
>RBS_GALSU (P23756) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 43.1 bits (100), Expect = 3e-04 Identities = 24/70 (34%), Positives = 36/70 (51%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T S+LP L+ E + KQ+DY+I K +E++ ++ P +W MW LP+ Sbjct: 7 TFSFLPDLTDEQIKKQIDYMISKKLAIGIEYT--------NDIHP---RNSFWEMWGLPL 55 Query: 386 FGCTDATQVL 415 F TD VL Sbjct: 56 FEVTDPAPVL 65
>RBS_BRAJA (Q9ZI33) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 134 Score = 42.0 bits (97), Expect = 6e-04 Identities = 22/68 (32%), Positives = 31/68 (45%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ + + KQV Y + W +EF+ + YW MW LPMF Sbjct: 9 SFLPDLTDDQIYKQVQYCLAKGWAVNIEFT-----------DDPHPRNTYWEMWGLPMFD 57 Query: 392 CTDATQVL 415 DA V+ Sbjct: 58 LQDAAGVM 65
>RBS_ANTSP (P25458) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 41.6 bits (96), Expect = 8e-04 Identities = 20/70 (28%), Positives = 31/70 (44%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T S+LP L+ E + KQ+ Y + W +EF+ + YW +W LP+ Sbjct: 7 TFSFLPDLTDEQIKKQIAYAVSQNWAINIEFT-----------DDPHPRNNYWELWGLPL 55 Query: 386 FGCTDATQVL 415 F D V+ Sbjct: 56 FDINDVESVM 65
>RBS_GUITH (P14960) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ E ++KQ+ Y I W +E++ + YW +W LP+FG Sbjct: 9 SFLPDLTDEQIVKQIQYAISKNWALNVEWT-----------DDPHPRNAYWDLWGLPLFG 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 IKDPAAVM 65
>RBSC_RALEU (P09658) Ribulose bisphosphate carboxylase small chain, chromosomal| (EC 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 41.2 bits (95), Expect = 0.001 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T S+LP L+ E + KQ++Y + W LE++ + YW M+ LPM Sbjct: 7 TFSFLPELTDEQITKQLEYCLNQGWAVGLEYT-----------DDPHPRNTYWEMFGLPM 55 Query: 386 FGCTDATQVL 415 F DA +L Sbjct: 56 FDLRDAAGIL 65
>RBS_CYAME (O22024) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T YLP L+ E + KQ+ Y I W +E++ + YW MW LP+ Sbjct: 7 TFCYLPDLTDEQIRKQIQYAINQGWAVSVEYT-----------DDPHPRNSYWEMWGLPL 55 Query: 386 FGCTDATQVL 415 F D ++ Sbjct: 56 FDVKDPATIM 65
>RBS_PORAE (Q09125) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/70 (27%), Positives = 33/70 (47%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T S+LP L+ + KQV Y + KW +E++ + +W +W LP+ Sbjct: 7 TFSFLPDLTDAQIQKQVQYAVSKKWAVSVEYT-----------DDPHPRNSFWELWGLPL 55 Query: 386 FGCTDATQVL 415 F DA+ ++ Sbjct: 56 FDVKDASALM 65
>RBS_CYACA (P37394) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T S+LP L+ + + KQ+ Y I W +E++ + YW MW LP+ Sbjct: 7 TFSFLPDLTNDQIRKQIQYAINKGWALSVEYT-----------DDPHPRNSYWEMWGLPL 55 Query: 386 FGCTDATQVL 415 F D ++ Sbjct: 56 FDVKDPAAIM 65
>RBS1_RHOSH (P27998) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 129 Score = 39.7 bits (91), Expect = 0.003 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ E + QVDY + W L EH P + YW MW +PMF Sbjct: 9 SFLPDLTDEQISAQVDYCLGRGWAVSL----------EHTDDP-HPRNTYWEMWGMPMFD 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 LRDPKGVM 65
>RBS_OLILU (P14961) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 39.7 bits (91), Expect = 0.003 Identities = 19/68 (27%), Positives = 33/68 (48%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 SYLP L+ ++KQ+DY + W +E++ + YW +W LP+F Sbjct: 9 SYLPDLTDAQIIKQIDYCLSRGWSVGVEWT-----------DDPHPRNAYWELWGLPLFD 57 Query: 392 CTDATQVL 415 D++ +L Sbjct: 58 VKDSSAIL 65
>RBS_XANFL (P23012) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 133 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/69 (28%), Positives = 29/69 (42%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T S+LP L+ + Q+ Y + W +E++ + YW MW LPM Sbjct: 7 TFSFLPDLTAAQVKAQIQYALDQNWAVSVEYT-----------DDPHPRNTYWEMWGLPM 55 Query: 386 FGCTDATQV 412 F DA V Sbjct: 56 FDLRDAAGV 64
>RBS_PLECA (Q08052) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 38.1 bits (87), Expect = 0.009 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ + KQ+ Y + W +E++ + YW MW LP+F Sbjct: 9 SFLPDLTDAQVTKQIQYALNKSWAISIEYT-----------DDPHPRNSYWEMWGLPLFD 57 Query: 392 CTDATQVL 415 D +L Sbjct: 58 VKDPAAIL 65
>RBS_CYLSN (P24683) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 38.1 bits (87), Expect = 0.009 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ E + KQV+Y I W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDEQIEKQVNYAISKGWAMNVEWT-----------DDPHPRNNYWELWGLPLFD 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 IKDPASVM 65
>DAX1_MOUSE (Q61066) Nuclear receptor 0B1 (Nuclear receptor DAX-1)| Length = 472 Score = 37.0 bits (84), Expect = 0.019 Identities = 22/74 (29%), Positives = 33/74 (44%) Frame = -2 Query: 337 RCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEWWQVRQGLELLDALDGPHLHAPD 158 R V E++P + + P+ ADQ +E RA WW G++ L L D Sbjct: 200 RSYVCGEEQPQQISVASGTPVSADQTPATPQEQPRAPWWDASPGVQRLITL-------KD 252 Query: 157 PSTVADAAEASTVR 116 P V +AA A ++ Sbjct: 253 PQVVCEAASAGLLK 266
>DAX1_RAT (P70503) Nuclear receptor 0B1 (Nuclear receptor DAX-1)| Length = 472 Score = 36.6 bits (83), Expect = 0.025 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = -2 Query: 337 RCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEWWQVRQGLELLDALDGPHLHAPD 158 R V E++P + + + P+ ADQ +E RA WW G++ AL D Sbjct: 200 RSYVCCEEQPQQSSVASDTPVRADQTPAAPQEQPRAPWWDTSSGVQRPIAL-------KD 252 Query: 157 PSTVADAAEASTVR 116 P V +AA A ++ Sbjct: 253 PQVVCEAASAGLLK 266
>RBSP_RALEU (Q59102) Ribulose bisphosphate carboxylase small chain, plasmid (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 36.2 bits (82), Expect = 0.032 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = +2 Query: 206 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 385 T S+LP L+ + Q++Y + W +E++ + YW M+ LPM Sbjct: 7 TFSFLPDLTDAQITSQLEYCLNQGWAVGIEYT-----------DDPHPRNTYWEMFGLPM 55 Query: 386 FGCTDATQVL 415 F DA +L Sbjct: 56 FDLRDAAGIL 65
>RBS2_RHIME (P56890) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 129 Score = 35.8 bits (81), Expect = 0.042 Identities = 20/68 (29%), Positives = 30/68 (44%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ E + QV+Y + W +E++ + YW MW PMF Sbjct: 9 SFLPDLTDEQITAQVEYCLGRGWAIGVEYT-----------DDPHPRNTYWEMWGNPMFD 57 Query: 392 CTDATQVL 415 DA V+ Sbjct: 58 LRDAKGVM 65
>RBS_ECTSI (P24395) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 35.4 bits (80), Expect = 0.055 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP LS + + +QV Y + W +E++ + YW +W LP+F Sbjct: 9 SFLPDLSDDQIKQQVSYAMSKGWAVSVEWT-----------DDPHPRNSYWELWGLPLFD 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 VKDPAAVM 65
>RBS1_RHIME (P58349) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 129 Score = 35.4 bits (80), Expect = 0.055 Identities = 20/68 (29%), Positives = 29/68 (42%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ E + QV Y + W +E++ + YW MW PMF Sbjct: 9 SFLPDLTDEQITAQVQYCLGKGWAIGVEYT-----------DDPHPRNTYWEMWGNPMFD 57 Query: 392 CTDATQVL 415 DA V+ Sbjct: 58 LKDAKGVM 65
>RBS_PORPU (P51227) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 35.0 bits (79), Expect = 0.072 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ + + KQ+ Y++ W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDQQINKQLAYIVSKGWSANVEYT-----------DDPHPRNAYWELWGLPLFD 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 VKDPAAVM 65
>RBS_PYLLI (P23652) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 35.0 bits (79), Expect = 0.072 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP LS E + QV Y + W +E++ + YW +W LP+F Sbjct: 9 SFLPDLSDEQIKLQVGYAMSKGWAVSVEWT-----------DDPHPRNSYWELWGLPLFD 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 VKDPAAVM 65
>RBS_ODOSI (P49521) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 34.7 bits (78), Expect = 0.094 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ + + KQ+ Y I W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDQQIEKQIAYCIDKGWAMNVEWT-----------DDPHPRNSYWELWGLPLFD 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 IKDIASVM 65
>RBS_THANO (O98948) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 33.5 bits (75), Expect = 0.21 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +2 Query: 212 SYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 S+LP L+ + KQV Y + W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDTQIEKQVAYAMNKGWAMNVEWT-----------DDPHPRNNYWELWGLPLFD 57 Query: 392 CTDATQVL 415 D V+ Sbjct: 58 IKDPATVM 65
>SYH_BIFLO (Q8G864) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 466 Score = 31.2 bits (69), Expect = 1.0 Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -2 Query: 325 LTEDEPNLAELEARHPLGADQVVDLLKEGLRAEWWQVRQGLEL--LDALDGPHLHA 164 LT+ E L E++ +GAD+V LL E A Q R LEL L A DG L A Sbjct: 188 LTDVEGVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELTASDGAELAA 243
>PK1L1_MOUSE (Q8R526) Polycystic kidney disease 1-like 1 protein| (Polycystin-1L1) (Fragment) Length = 531 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +2 Query: 182 IEGIKKFETLSY--LPPLSTEALLKQVDYLI-RSKWVPCLEFSKVGFIFREHNASPGY 346 + I +F++ + LP + + LL L+ +S++V C E GFIF E + PGY Sbjct: 12 VSSISEFQSHPHNLLPGIFSAFLLVLYGILVSKSRYVDCHEKKNPGFIFLEEDTLPGY 69
>HRPK_PSESY (P41501) Pathogenicity locus protein hrpK| Length = 641 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +2 Query: 17 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIK 196 S++ + + + + V+P + STA + SN A+ S ++ + + E +K Sbjct: 76 SSSESTSSVDQDSDQVSPMTSVSSTASASPTAASNPANAPSATDAAFLDNSEYSSPEALK 135 Query: 197 KFETL-SYLPPLSTEALLKQVDYLIRSKWV 283 ++E + + LPP E K+++ I + W+ Sbjct: 136 RWEPMVANLPPEEREQAAKELNRPIAAAWM 165
>NFIP1_RAT (Q5U2S1) NEDD4 family-interacting protein 1| Length = 221 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_MOUSE (Q8R0W6) NEDD4 family-interacting protein 1 (NEDD4 WW| domain-binding protein 5) Length = 221 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_HUMAN (Q9BT67) NEDD4 family-interacting protein 1 (NEDD4 WW| domain-binding protein 5) (Putative MAPK-activating protein PM13) (Putative NF-kappa-B-activating protein 164) (Putative NFKB and MAPK-activating protein) (Breast cancer-associated protein Length = 221 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_XENLA (Q6GLN5) NEDD4 family-interacting protein 1| Length = 212 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 150 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 179
>NFIP1_XENTR (Q4V786) NEDD4 family-interacting protein 1| Length = 211 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 149 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 178
>NFIP1_BRARE (Q6DGP4) NEDD4 family-interacting protein 1| Length = 210 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 148 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 177
>PAX4_RAT (O88436) Paired box protein Pax-4| Length = 349 Score = 30.4 bits (67), Expect = 1.8 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 15/98 (15%) Frame = -2 Query: 403 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGAD-------------- 266 G+G S+ P PA+V R L ++ P L E + L A+ Sbjct: 71 GIGGSK----PRLATPAVVA--RIAQLKDEYPALFAWEIQRQLCAEGLCTQDKAPSVSSI 124 Query: 265 -QVVDLLKEGLRAEWWQVRQGLELLDALDGPHLHAPDP 155 +V+ L+E R W Q+R L AL PH + P Sbjct: 125 NRVLRALQEDQRLHWTQLRSPAVLAPALPSPHSNCEAP 162
>VE4_CRPVK (P03124) Probable protein E4| Length = 212 Score = 30.0 bits (66), Expect = 2.3 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 Query: 100 PRQPPLERC*PRQRQQRWKDQVHAGVAHRGHQ 195 P++PP +C P +R+Q K +VH +GHQ Sbjct: 127 PKRPPTVQCPPLKRKQGPKPRVHWADEGQGHQ 158
>RGL2_CANFA (Q5TJE5) Ral guanine nucleotide dissociation stimulator-like 2| (RAS-associated protein RAB2L) Length = 780 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = +2 Query: 8 YLHSTAMAPTVMASSATSVAPFQGLKSTA--GLPVSRRSNGASLGSVSNGG 154 YLHS A P+ ++ A+S P +G + +A G P+S + GAS G+ GG Sbjct: 594 YLHSLA-DPSHLSPPASSPRPSRGHRRSASCGSPLSGGAEGASKGTEYRGG 643
>KNAP3_MALDO (O04136) Homeobox protein knotted-1-like 3 (KNAP3)| Length = 427 Score = 29.3 bits (64), Expect = 3.9 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 136 QRQQRWKDQVHAGVAHRGHQEVRDPVLLA 222 Q +W Q H + HR H +V D V +A Sbjct: 97 QASNQWLSQSHRPILHRNHSDVNDDVTVA 125
>TERPD_PSESP (P33010) Probable alcohol dehydrogenase (EC 1.1.1.1)| Length = 319 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 340 RRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEWWQVRQG 206 R C + EP+ A+ E LGA +V+D L E L Q+ +G Sbjct: 189 RGCSRIIVSEPSAAKREQALALGATEVIDPLNENLVERVQQITEG 233
>P2RX7_HUMAN (Q99572) P2X purinoceptor 7 (ATP receptor) (P2X7) (Purinergic| receptor) (P2Z receptor) Length = 595 Score = 29.3 bits (64), Expect = 3.9 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 366 QCGSCLCSDAPTPHRC 413 QCGSCL S P HRC Sbjct: 478 QCGSCLPSQLPESHRC 493
>PPCK_TRYBB (P13735) Phosphoenolpyruvate carboxykinase [ATP], glycosomal (EC| 4.1.1.49) (Glycosomal protein P60) Length = 472 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/40 (32%), Positives = 15/40 (37%) Frame = -3 Query: 195 LMPSMGHTCMHXXXXXXXXXXXXXPFERRLTGRPAVDLSP 76 LMP MGH CMH F TG+ + P Sbjct: 195 LMPRMGHLCMHASANVGKSGDVTVFFGLSGTGKTTLSADP 234
>LAMB1_HUMAN (P07942) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1786 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/73 (24%), Positives = 29/73 (39%) Frame = -2 Query: 418 VEHLCGVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEG 239 V CG+ H+ P+C V + ++C + +P L L + V Sbjct: 52 VTSTCGL----HKPEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNR 107 Query: 238 LRAEWWQVRQGLE 200 L+ WWQ G+E Sbjct: 108 LKI-WWQSENGVE 119
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +1 Query: 25 YGPHRDGLVGHLRRSFPGAQVHRRPPRQPPLERC*PRQRQQRWKDQVHAGVA 180 YGP +G + +Q+ P +QP ++ +Q+QQ+++ V AG A Sbjct: 362 YGPTGNGPTSNGLPQQVNSQIPPAPQQQPQQQQFQQQQQQQQYQQMVQAGYA 413
>LOXL1_HUMAN (Q08397) Lysyl oxidase homolog 1 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 1) (LOL) Length = 574 Score = 28.1 bits (61), Expect = 8.8 Identities = 26/94 (27%), Positives = 36/94 (38%) Frame = -2 Query: 397 GASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEWWQ 218 G+ RQ P P+P V + +ARHP G QV D +E + Sbjct: 90 GSPRRRQAPSLPLPGRV-----------GSDTVRGQARHPFGFGQVPDNWREVAVGD--- 135 Query: 217 VRQGLELLDALDGPHLHAPDPSTVADAAEASTVR 116 G+ L H S+V+ +A AST R Sbjct: 136 -STGMALARTSVSQQRHGGSASSVSASAFASTYR 168
>SYY_MYCS5 (Q4A5E2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 411 Score = 28.1 bits (61), Expect = 8.8 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Frame = +2 Query: 116 SNGASLGSVSNGGRIRCMQVW-PIEGIKKFETLSYL---PPLSTEALLKQVDYLIRSKWV 283 SNG G + GG + W + K F+ +L P E LLK W+ Sbjct: 218 SNGNKFGKSTGGGNL-----WLDAQKTKPFDMYQFLINQPDSEVEKLLK---------WL 263 Query: 284 PCLEFSKVGFIFREHNASP 340 LE S++ + +HN +P Sbjct: 264 TFLEISEIKDLVNKHNKNP 282
>HEM13_HORVU (O65796) Glutamyl-tRNA reductase 3, chloroplast precursor (EC| 1.2.1.70) (GluTR) Length = 535 Score = 28.1 bits (61), Expect = 8.8 Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 23/125 (18%) Frame = +2 Query: 32 PTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQ-------VWP--- 181 P MA+ A SVA + K +A + +S+ A +G + + + +WP Sbjct: 54 PAQMAAMAASVAALEQFKISADRYMKEKSSIAVIGLSIHTAPVEMREKLAVAEELWPRAV 113 Query: 182 -----IEGIKKFETLS-------YLPPLSTEALLKQ-VDYLIRSKWVPCLEFSKVGFIFR 322 + I+K LS Y+ LS +++ VD++ +P +E + F+FR Sbjct: 114 AELTNLNHIEKAAVLSPCNRMEIYVVALSWNRGIREIVDWMSMKSGIPAVELREHLFMFR 173 Query: 323 EHNAS 337 + +A+ Sbjct: 174 DSDAT 178
>AAS_SALTY (Q8ZMA4) AAS bifunctional protein [Includes:| 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) (Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase) (2-acyl-GPE acyltransferase); Acyl-[acyl-carrier-protein] synthetase (EC 6 Length = 719 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +1 Query: 61 RRSFPGAQVHRRPPRQPPLERC*PRQRQQR-------WKDQVHAGVAHRGHQEVRDPVLL 219 RR FP Q+H PP Q P+ PR R +R + + A +A R + + + +L Sbjct: 154 RRLFPRIQLHILPPTQIPMPEA-PRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLA 212 Query: 220 ATTQHG 237 A ++G Sbjct: 213 AQYRYG 218
>AAS_SALTI (Q8Z406) AAS bifunctional protein [Includes:| 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) (Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase) (2-acyl-GPE acyltransferase); Acyl-[acyl-carrier-protein] synthetase (EC 6 Length = 719 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +1 Query: 61 RRSFPGAQVHRRPPRQPPLERC*PRQRQQR-------WKDQVHAGVAHRGHQEVRDPVLL 219 RR FP Q+H PP Q P+ PR R +R + + A +A R + + + +L Sbjct: 154 RRLFPRIQLHILPPTQIPMPEA-PRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLA 212 Query: 220 ATTQHG 237 A ++G Sbjct: 213 AQYRYG 218
>AAS_SALPA (Q5PEN7) AAS bifunctional protein [Includes:| 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) (Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase) (2-acyl-GPE acyltransferase); Acyl-[acyl-carrier-protein] synthetase (EC 6 Length = 719 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +1 Query: 61 RRSFPGAQVHRRPPRQPPLERC*PRQRQQR-------WKDQVHAGVAHRGHQEVRDPVLL 219 RR FP Q+H PP Q P+ PR R +R + + A +A R + + + +L Sbjct: 154 RRLFPRIQLHILPPTQIPMPEA-PRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLA 212 Query: 220 ATTQHG 237 A ++G Sbjct: 213 AQYRYG 218
>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 658 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%) Frame = -2 Query: 379 QLPHCPVPAIVVPRRCVVLT-----EDEPNLAELEARHPLG 272 QLP PVP + VP R V+T + EP++ P+G Sbjct: 427 QLPQLPVPNLEVPARPSVMTSTPAPKGEPDIIPATRNEPIG 467 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,988,645 Number of Sequences: 219361 Number of extensions: 1212503 Number of successful extensions: 4429 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 4086 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4267 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
