Clone Name | basd3k08 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
---|---|---|---|
1 | MTA_STRPU (P04734) Metallothionein-A (MTA) | 33 | 0.71 |
2 | MT_STENE (P55953) Metallothionein (MT) | 32 | 1.6 |
3 | MSL2_DROME (P50534) Protein male-specific lethal-2 | 31 | 3.5 |
4 | LCTP_BACSU (P55910) L-lactate permease | 30 | 4.6 |
5 | Y46K_DROME (P53404) Hypothetical protein CG10349 in chromosome 3 | 30 | 4.6 |
6 | MTB_STRPU (Q27287) Metallothionein-B (MTB) | 30 | 6.0 |
>MTA_STRPU (P04734) Metallothionein-A (MTA)| Length = 64 Score = 33.1 bits (74), Expect = 0.71 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -3 Query: 631 CVVCSEEVLQSCWGITCCWASECEFDNCCC 542 CV C E +C+G CC EC D CC Sbjct: 6 CVCCKEGKECACFGQDCCKTGECCKDGTCC 35
>MT_STENE (P55953) Metallothionein (MT)| Length = 64 Score = 32.0 bits (71), Expect = 1.6 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = -3 Query: 631 CVVCSEEVLQSCWGITCCWASECEFDNCCC 542 CV C E +C G CC EC D CC Sbjct: 6 CVCCKEGKECACKGKECCTTGECCKDGTCC 35
>MSL2_DROME (P50534) Protein male-specific lethal-2| Length = 773 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 5/32 (15%) Frame = +3 Query: 423 RNSTCSCYRNYSSSH*CH-----NPQLHSHDY 503 RNS C CY++Y+S CH NP H DY Sbjct: 540 RNSRCPCYKSYNSCAGCHCVCCKNP--HKEDY 569
>LCTP_BACSU (P55910) L-lactate permease| Length = 541 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/40 (30%), Positives = 26/40 (65%) Frame = +1 Query: 22 RQLYMQNHILQQNSMQFNPPKLHQQMKPINDLSNAALPLN 141 + L+ + +L Q+++ F P LHQQ+ + ++ +A+PL+ Sbjct: 315 KALFQEGGLLYQSTLLFKMPFLHQQIMKMPPIAPSAMPLD 354
>Y46K_DROME (P53404) Hypothetical protein CG10349 in chromosome 3| Length = 404 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +1 Query: 34 MQNHILQQNSMQFNPPKLHQQMKPINDLSNAALPLN-QLGAIRN 162 M+ ++S+ F PP +QQM +N AA+P++ QL IRN Sbjct: 1 MEEQSPPRDSLLFGPPTEYQQMPKVNLFRVAAIPVDVQLQRIRN 44
>MTB_STRPU (Q27287) Metallothionein-B (MTB)| Length = 65 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = -3 Query: 631 CVVCSEEVLQSCWGITCCWASECEFDNCCC 542 CV C E +C G CC +C D CC Sbjct: 6 CVCCKEGNECACTGQDCCTIGKCCKDGTCC 35 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,805,443 Number of Sequences: 219361 Number of extensions: 975802 Number of successful extensions: 2471 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2300 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2458 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)