Clone Name | basd3k04 |
---|---|
Clone Library Name | barley_pub |
>SUV3_DROME (P20193) Protein suppressor of variegation 3-7| Length = 1250 Score = 33.1 bits (74), Expect = 0.48 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +3 Query: 9 SKITTGGKPTLHRPQKE*LSVRITTGLILGGKRNNVCQNLICLYILVNATTRP 167 SKIT P + +PQ+ S+ +T ++ GG +N CQ + +VN RP Sbjct: 1199 SKITVTNTPQMQQPQQAQASITSSTPIMRGGPSSNGCQ-ITTFRTMVNHNRRP 1250
>ZDH12_HUMAN (Q96GR4) Probable palmitoyltransferase ZDHHC12 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 12) (DHHC-12) (Zinc finger protein 400) Length = 267 Score = 32.3 bits (72), Expect = 0.81 Identities = 17/34 (50%), Positives = 17/34 (50%) Frame = -1 Query: 346 QRTSTSMDFGLTR*AHHLCCGWPLAEGGWAENHW 245 QR S D GLTR H CGWP G W E W Sbjct: 225 QRPSNPFDRGLTRNLAHFFCGWP--SGSW-ETLW 255
>ZDH12_RAT (Q6DGF5) Probable palmitoyltransferase ZDHHC12 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 12) (DHHC-12) Length = 267 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -1 Query: 346 QRTSTSMDFGLTR*AHHLCCGWPLA--EGGWAE 254 QRTS D G TR H CGWP E WAE Sbjct: 225 QRTSNPFDRGPTRNLAHFFCGWPSGPWETLWAE 257
>ZDH12_MOUSE (Q8VC90) Probable palmitoyltransferase ZDHHC12 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 12) (DHHC-12) Length = 267 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = -1 Query: 346 QRTSTSMDFGLTR*AHHLCCGWPLAEGGW 260 QRTS D G TR H CGWP G W Sbjct: 225 QRTSNPFDRGPTRNLAHFFCGWP--SGPW 251
>CQ028_MOUSE (Q8R1F6) Protein C17orf28 homolog| Length = 788 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/62 (29%), Positives = 32/62 (51%) Frame = -3 Query: 467 RVVEECSQQAAAHSSPDRSDSVRTTIS*KQLSETKPAWQGSADINKHGFWPDKVSSSSLL 288 R +E SQQ++A +SP +S +T ++LS + Q S + W K+ +++ Sbjct: 639 RSLEPESQQSSAENSPSDGESSQTWREQRRLSNASASGQWSPTSDWILSWKSKLPLQTIM 698 Query: 287 RL 282 RL Sbjct: 699 RL 700
>SODM3_PLEBO (P50060) Superoxide dismutase [Mn] 3 precursor (EC 1.15.1.1)| (Fragment) Length = 239 Score = 28.9 bits (63), Expect = 9.0 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +2 Query: 212 KKIPFQAPSCSPMIFSPPSFCQRPTAAEMMSLP 310 ++ P Q+P+ SP + +P ++ RP A LP Sbjct: 4 QQTPAQSPTASPTVSTPVAYVDRPLTASPAQLP 36 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,160,355 Number of Sequences: 219361 Number of extensions: 1334256 Number of successful extensions: 3530 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3402 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3529 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)