Clone Name	basd3j20
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_483710.1| Oryza sativa (japonica cultivar-group), mRNA	694	0.0
2	dbj|AK111661.1| Oryza sativa (japonica cultivar-group) cDNA clon...	694	0.0
3	ref|XM_483709.1| Oryza sativa (japonica cultivar-group), mRNA	668	0.0
4	dbj|AK112044.1| Oryza sativa (japonica cultivar-group) cDNA clon...	668	0.0
5	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	149	1e-32
6	dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic D...	149	1e-32
7	dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic D...	149	1e-32
8	ref|NM_106276.3| Arabidopsis thaliana nucleotide binding AT1G762...	66	2e-07
9	gb|BT010880.1| Arabidopsis thaliana At1g76260 gene, complete cds	66	2e-07
10	dbj|AK176650.1| Arabidopsis thaliana mRNA for putative WD-repeat...	66	2e-07
11	dbj|AK176410.1| Arabidopsis thaliana mRNA for putative WD-repeat...	66	2e-07
12	dbj|AK175439.1| Arabidopsis thaliana mRNA for putative WD-repeat...	66	2e-07
13	ref|NM_101904.3| Arabidopsis thaliana nucleotide binding AT1G205...	58	4e-05
14	gb|BT015485.1| Arabidopsis thaliana At1g76260 mRNA sequence	58	4e-05
15	gb|BT000290.1| Arabidopsis thaliana unknown protein (At1g20540) ...	58	4e-05
16	gb|AY093157.1| Arabidopsis thaliana unknown protein (At1g20540) ...	58	4e-05
17	emb|BX817851.1|CNS0ACE1 Arabidopsis thaliana Full-length cDNA Co...	58	4e-05
18	emb|BX815472.1|CNS0ABIG Arabidopsis thaliana Full-length cDNA Co...	58	4e-05
19	emb|BX813812.1|CNS0AC4B Arabidopsis thaliana Full-length cDNA Co...	54	6e-04
20	ref|XM_866779.1| PREDICTED: Bos taurus similar to cAMP-dependent...	44	0.57
21	gb|BC105954.1| Homo sapiens matrix metallopeptidase 3 (stromelys...	42	2.3
22	gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosom...	42	2.3
23	ref|NM_002422.3| Homo sapiens matrix metallopeptidase 3 (stromel...	42	2.3
24	gb|BC074869.2| Homo sapiens matrix metallopeptidase 3 (stromelys...	42	2.3
25	gb|BC074815.2| Homo sapiens matrix metallopeptidase 3 (stromelys...	42	2.3
26	gb|BC069716.1| Homo sapiens matrix metallopeptidase 3 (stromelys...	42	2.3
27	gb|BC069676.1| Homo sapiens matrix metallopeptidase 3 (stromelys...	42	2.3
28	gb|AC099012.1| Drosophila melanogaster, chromosome 2R, region 56...	42	2.3
29	gb|AF405705.1|AF405705 Homo sapiens matrix metalloproteinase 3 (...	42	2.3
30	gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, co...	42	2.3
31	emb|BX816678.1|CNS0ABO8 Arabidopsis thaliana Full-length cDNA Co...	42	2.3
32	dbj|AK223291.1| Homo sapiens mRNA for matrix metalloproteinase 3...	42	2.3
33	dbj|AK223283.1| Homo sapiens mRNA for matrix metalloproteinase 3...	42	2.3
34	gb|AC105760.3| Homo sapiens BAC clone RP11-346I14 from 2, comple...	42	2.3
35	gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, com...	42	2.3
36	gb|AC012394.3|AC012394 Arabidopsis thaliana chromosome 1 BAC F15...	42	2.3
37	gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana...	42	2.3
38	gb|AE004543.1| Pseudomonas aeruginosa PAO1, section 104 of 529 o...	42	2.3
39	gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57...	42	2.3
40	dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...	42	2.3
41	dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CM...	42	2.3
42	gb|AC005286.1|AC005286 Drosophila melanogaster DNA sequence (P1s...	42	2.3
43	gb|BC107491.1| Homo sapiens matrix metallopeptidase 3 (stromelys...	42	2.3
44	gb|BC107490.1| Homo sapiens matrix metallopeptidase 3 (stromelys...	42	2.3
45	emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chr...	42	2.3
46	emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on ch...	42	2.3
47	emb|X05232.1|HSSTROMR Human mRNA for stromelysin	42	2.3
48	gb|J03209.1|HUMMMP3A Human matrix metalloproteinase-3 (MMP-3) mR...	42	2.3
49	ref|XM_640600.1| Dictyostelium discoideum ABC transporter A fami...	40	8.9
50	gb|AE017335.3| Bacillus anthracis str. 'Ames Ancestor' plasmid p...	40	8.9
51	gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosom...	40	8.9
52	gb|AF188935.1| Bacillus anthracis plasmid pXO2, complete sequence	40	8.9
53	gb|AC114549.9| Mus musculus chromosome 19, clone RP24-216P17, co...	40	8.9
54	emb|AL391314.21| Human DNA sequence from clone RP11-477H7 on chr...	40	8.9
55	emb|AL023807.6|HS525L6 Human DNA sequence from clone RP3-525L6 o...	40	8.9
56	gb|AE011191.1| Bacillus anthracis str. A2012 plasmid pXO2, compl...	40	8.9
57	gb|AF465310.1| Dictyostelium discoideum ABC transporter ABCA.8 (...	40	8.9
58	gb|AF465309.1| Dictyostelium discoideum ABC transporter ABCA.7 (...	40	8.9
59	gb|AC074250.6| Homo sapiens BAC clone RP11-622A1 from 4, complet...	40	8.9
60	gb|AC161421.3| Mus musculus BAC clone RP24-424A8 from chromosome...	40	8.9
61	gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome	40	8.9
62	gb|AC154639.2| Mus musculus BAC clone RP23-306D9 from chromosome...	40	8.9
63	emb|CR385663.1| Gallus gallus finished cDNA, clone ChEST386f12	40	8.9
64	gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome...	40	8.9
65	emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00	40	8.9
66	emb|Z70268.1|CET21E8 Caenorhabditis elegans Cosmid T21E8, comple...	40	8.9
67	dbj|AK116985.1| Ciona intestinalis cDNA, clone:cits012l11, full ...	40	8.9
68	emb|AL844151.3| Mouse DNA sequence from clone RP23-73O7 on chrom...	40	8.9

---

>ref|XM_483710.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1743

 Score =  694 bits (350), Expect = 0.0
 Identities = 573/646 (88%), Gaps = 1/646 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    cttgagcagcttttcgcgctcgatgaccacacggacaaaataagatgtgttctctggtgg 66
            ||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 413  cttgagcagcttttcacgcttgatgagcacacgggcaaaataagatgtgttctctggtgg 472

                                                                        
Query: 67   ccactggggaagcatgataagttaattagcatcgatgacagaaacatttttctctggaac 126
            ||||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||||| 
Sbjct: 473  ccactagggaagcacgacaagttaattagtattgatgacagaaatattttcctctggaat 532

                                                                        
Query: 127  atagatccatcaaataaatcagccaaggtgatatcacagggatctgctgacatgcttccc 186
            |||||| |||||||||| ||||||||||||||   | |||| ||||||||||||||||||
Sbjct: 533  atagatgcatcaaataagtcagccaaggtgatgcaaaaggggtctgctgacatgcttccc 592

                                                                        
Query: 187  aatttacgtggtggagcttgggatccacacaatcacaacgcagttgctacaataactgat 246
            ||||||||||||||| |||||||||||||| |||||||  || ||||| |||| ||||||
Sbjct: 593  aatttacgtggtggatcttgggatccacacgatcacaattcaattgctgcaattactgat 652

                                                                        
Query: 247  tcgtcactccacttctgggatctccgttctatgaagagatcaaatgcaattgaacatgct 306
            || ||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||| 
Sbjct: 653  tcctcacttcactgctgggatctccgttctatgaagaaatcaaatgcaattgagcatgcg 712

                                                                        
Query: 307  catatccgggatgtggattataaccccaagaagcaaaacataattgcaacagcagaggac 366
            ||| | |||||||||||||||||||||||||| ||  || ||||| |||||||||| || 
Sbjct: 713  cattttcgggatgtggattataaccccaagaaacagcacttaattacaacagcagaagat 772

                                                                        
Query: 367  gaatttggaattcgtttgtgggatctcagaatgcttaagcatcctctgaaggatctccct 426
            |||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 773  gaatttggtatccgtttgtgggatctcagaatgcttaagtatcctctgaagaatctccct 832

                                                                        
Query: 427  ggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 486
            || ||||| ||||||||||||||||||||||||||||||||| ||||  || ||||||||
Sbjct: 833  gggcattcgcattggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 892

                                                                        
Query: 487  agtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactct 546
            ||||||||||| |||||| |||||||||| ||||| ||||||||||||| ||||||||| 
Sbjct: 893  agtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactca 952

                                                                        
Query: 547  ggacccgaaagccctttctggttcacccactaggcaagaagaaccattactgaactcgta 606
            ||||| ||||| || | ||||||||||||| ||  |||||||||||||||| || || ||
Sbjct: 953  ggacctgaaagtcc-tcctggttcacccacaagagaagaagaaccattactaaattcata 1011

                                                          
Query: 607  tactgactacgaagatagcatctatggaattgcatggagctcccat 652
             ||||| || ||||||||||| || || ||||||||||||||||||
Sbjct: 1012 cactgattatgaagatagcatatacggtattgcatggagctcccat 1057

---

>dbj|AK111661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153B06, full
            insert sequence
          Length = 1743

 Score =  694 bits (350), Expect = 0.0
 Identities = 573/646 (88%), Gaps = 1/646 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    cttgagcagcttttcgcgctcgatgaccacacggacaaaataagatgtgttctctggtgg 66
            ||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 413  cttgagcagcttttcacgcttgatgagcacacgggcaaaataagatgtgttctctggtgg 472

                                                                        
Query: 67   ccactggggaagcatgataagttaattagcatcgatgacagaaacatttttctctggaac 126
            ||||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||||| 
Sbjct: 473  ccactagggaagcacgacaagttaattagtattgatgacagaaatattttcctctggaat 532

                                                                        
Query: 127  atagatccatcaaataaatcagccaaggtgatatcacagggatctgctgacatgcttccc 186
            |||||| |||||||||| ||||||||||||||   | |||| ||||||||||||||||||
Sbjct: 533  atagatgcatcaaataagtcagccaaggtgatgcaaaaggggtctgctgacatgcttccc 592

                                                                        
Query: 187  aatttacgtggtggagcttgggatccacacaatcacaacgcagttgctacaataactgat 246
            ||||||||||||||| |||||||||||||| |||||||  || ||||| |||| ||||||
Sbjct: 593  aatttacgtggtggatcttgggatccacacgatcacaattcaattgctgcaattactgat 652

                                                                        
Query: 247  tcgtcactccacttctgggatctccgttctatgaagagatcaaatgcaattgaacatgct 306
            || ||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||| 
Sbjct: 653  tcctcacttcactgctgggatctccgttctatgaagaaatcaaatgcaattgagcatgcg 712

                                                                        
Query: 307  catatccgggatgtggattataaccccaagaagcaaaacataattgcaacagcagaggac 366
            ||| | |||||||||||||||||||||||||| ||  || ||||| |||||||||| || 
Sbjct: 713  cattttcgggatgtggattataaccccaagaaacagcacttaattacaacagcagaagat 772

                                                                        
Query: 367  gaatttggaattcgtttgtgggatctcagaatgcttaagcatcctctgaaggatctccct 426
            |||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 773  gaatttggtatccgtttgtgggatctcagaatgcttaagtatcctctgaagaatctccct 832

                                                                        
Query: 427  ggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 486
            || ||||| ||||||||||||||||||||||||||||||||| ||||  || ||||||||
Sbjct: 833  gggcattcgcattggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 892

                                                                        
Query: 487  agtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactct 546
            ||||||||||| |||||| |||||||||| ||||| ||||||||||||| ||||||||| 
Sbjct: 893  agtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactca 952

                                                                        
Query: 547  ggacccgaaagccctttctggttcacccactaggcaagaagaaccattactgaactcgta 606
            ||||| ||||| || | ||||||||||||| ||  |||||||||||||||| || || ||
Sbjct: 953  ggacctgaaagtcc-tcctggttcacccacaagagaagaagaaccattactaaattcata 1011

                                                          
Query: 607  tactgactacgaagatagcatctatggaattgcatggagctcccat 652
             ||||| || ||||||||||| || || ||||||||||||||||||
Sbjct: 1012 cactgattatgaagatagcatatacggtattgcatggagctcccat 1057

---

>ref|XM_483709.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1518

 Score =  668 bits (337), Expect = 0.0
 Identities = 551/621 (88%), Gaps = 1/621 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    cttgagcagcttttcgcgctcgatgaccacacggacaaaataagatgtgttctctggtgg 66
            ||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 412  cttgagcagcttttcacgcttgatgagcacacgggcaaaataagatgtgttctctggtgg 471

                                                                        
Query: 67   ccactggggaagcatgataagttaattagcatcgatgacagaaacatttttctctggaac 126
            ||||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||||| 
Sbjct: 472  ccactagggaagcacgacaagttaattagtattgatgacagaaatattttcctctggaat 531

                                                                        
Query: 127  atagatccatcaaataaatcagccaaggtgatatcacagggatctgctgacatgcttccc 186
            |||||| |||||||||| ||||||||||||||   | |||| ||||||||||||||||||
Sbjct: 532  atagatgcatcaaataagtcagccaaggtgatgcaaaaggggtctgctgacatgcttccc 591

                                                                        
Query: 187  aatttacgtggtggagcttgggatccacacaatcacaacgcagttgctacaataactgat 246
            ||||||||||||||| |||||||||||||| |||||||  || ||||| |||| ||||||
Sbjct: 592  aatttacgtggtggatcttgggatccacacgatcacaattcaattgctgcaattactgat 651

                                                                        
Query: 247  tcgtcactccacttctgggatctccgttctatgaagagatcaaatgcaattgaacatgct 306
            || ||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||| 
Sbjct: 652  tcctcacttcactgctgggatctccgttctatgaagaaatcaaatgcaattgagcatgcg 711

                                                                        
Query: 307  catatccgggatgtggattataaccccaagaagcaaaacataattgcaacagcagaggac 366
            ||| | |||||||||||||||||||||||||| ||  || ||||| |||||||||| || 
Sbjct: 712  cattttcgggatgtggattataaccccaagaaacagcacttaattacaacagcagaagat 771

                                                                        
Query: 367  gaatttggaattcgtttgtgggatctcagaatgcttaagcatcctctgaaggatctccct 426
            |||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 772  gaatttggtatccgtttgtgggatctcagaatgcttaagtatcctctgaagaatctccct 831

                                                                        
Query: 427  ggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 486
            || ||||| ||||||||||||||||||||||||||||||||| ||||  || ||||||||
Sbjct: 832  gggcattcgcattggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 891

                                                                        
Query: 487  agtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactct 546
            ||||||||||| |||||| |||||||||| ||||| ||||||||||||| ||||||||| 
Sbjct: 892  agtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactca 951

                                                                        
Query: 547  ggacccgaaagccctttctggttcacccactaggcaagaagaaccattactgaactcgta 606
            ||||| ||||| || | ||||||||||||| ||  |||||||||||||||| || || ||
Sbjct: 952  ggacctgaaagtcc-tcctggttcacccacaagagaagaagaaccattactaaattcata 1010

                                 
Query: 607  tactgactacgaagatagcat 627
             ||||| || |||||||||||
Sbjct: 1011 cactgattatgaagatagcat 1031

---

>dbj|AK112044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C03, full
            insert sequence
          Length = 1518

 Score =  668 bits (337), Expect = 0.0
 Identities = 551/621 (88%), Gaps = 1/621 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    cttgagcagcttttcgcgctcgatgaccacacggacaaaataagatgtgttctctggtgg 66
            ||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||
Sbjct: 412  cttgagcagcttttcacgcttgatgagcacacgggcaaaataagatgtgttctctggtgg 471

                                                                        
Query: 67   ccactggggaagcatgataagttaattagcatcgatgacagaaacatttttctctggaac 126
            ||||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||||| 
Sbjct: 472  ccactagggaagcacgacaagttaattagtattgatgacagaaatattttcctctggaat 531

                                                                        
Query: 127  atagatccatcaaataaatcagccaaggtgatatcacagggatctgctgacatgcttccc 186
            |||||| |||||||||| ||||||||||||||   | |||| ||||||||||||||||||
Sbjct: 532  atagatgcatcaaataagtcagccaaggtgatgcaaaaggggtctgctgacatgcttccc 591

                                                                        
Query: 187  aatttacgtggtggagcttgggatccacacaatcacaacgcagttgctacaataactgat 246
            ||||||||||||||| |||||||||||||| |||||||  || ||||| |||| ||||||
Sbjct: 592  aatttacgtggtggatcttgggatccacacgatcacaattcaattgctgcaattactgat 651

                                                                        
Query: 247  tcgtcactccacttctgggatctccgttctatgaagagatcaaatgcaattgaacatgct 306
            || ||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||| 
Sbjct: 652  tcctcacttcactgctgggatctccgttctatgaagaaatcaaatgcaattgagcatgcg 711

                                                                        
Query: 307  catatccgggatgtggattataaccccaagaagcaaaacataattgcaacagcagaggac 366
            ||| | |||||||||||||||||||||||||| ||  || ||||| |||||||||| || 
Sbjct: 712  cattttcgggatgtggattataaccccaagaaacagcacttaattacaacagcagaagat 771

                                                                        
Query: 367  gaatttggaattcgtttgtgggatctcagaatgcttaagcatcctctgaaggatctccct 426
            |||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 772  gaatttggtatccgtttgtgggatctcagaatgcttaagtatcctctgaagaatctccct 831

                                                                        
Query: 427  ggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 486
            || ||||| ||||||||||||||||||||||||||||||||| ||||  || ||||||||
Sbjct: 832  gggcattcgcattggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 891

                                                                        
Query: 487  agtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactct 546
            ||||||||||| |||||| |||||||||| ||||| ||||||||||||| ||||||||| 
Sbjct: 892  agtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactca 951

                                                                        
Query: 547  ggacccgaaagccctttctggttcacccactaggcaagaagaaccattactgaactcgta 606
            ||||| ||||| || | ||||||||||||| ||  |||||||||||||||| || || ||
Sbjct: 952  ggacctgaaagtcc-tcctggttcacccacaagagaagaagaaccattactaaattcata 1010

                                 
Query: 607  tactgactacgaagatagcat 627
             ||||| || |||||||||||
Sbjct: 1011 cactgattatgaagatagcat 1031

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  149 bits (75), Expect = 1e-32
 Identities = 108/119 (90%)
 Strand = Plus / Plus

                                                                            
Query: 164      agggatctgctgacatgcttcccaatttacgtggtggagcttgggatccacacaatcaca 223
                |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 27697820 aggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcaca 27697879

                                                                           
Query: 224      acgcagttgctacaataactgattcgtcactccacttctgggatctccgttctatgaag 282
                |  || ||||| |||| |||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 27697880 attcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaag 27697938



 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                            
Query: 53       gtgttctctggtggccactggggaagcatgataagttaattagcatcgatgacagaaaca 112
                ||||||||||||||||||| |||||||| || ||||||||||| || ||||||||||| |
Sbjct: 27697529 gtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaata 27697588

                                                            
Query: 113      tttttctctggaacatagatccatcaaataaatcagccaaggtg 156
                |||| |||||||| |||||| |||||||||| ||||||||||||
Sbjct: 27697589 ttttcctctggaatatagatgcatcaaataagtcagccaaggtg 27697632



 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                            
Query: 353      caacagcagaggacgaatttggaattcgtttgtgggatctcagaatgcttaagcatcctc 412
                |||||||||| || |||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct: 27698549 caacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctc 27698608

                                             
Query: 413      tgaaggatctccctggacattcacattgg 441
                ||||| |||||||||| ||||| ||||||
Sbjct: 27698609 tgaagaatctccctgggcattcgcattgg 27698637



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 486      gagtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactc 545
                |||||||||||| |||||| |||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 27698853 gagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactc 27698912

                            
Query: 546      tggacccgaaag 557
                 ||||| |||||
Sbjct: 27698913 aggacctgaaag 27698924



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 285      atcaaatgcaattgaacatgctcatatccgggatgtggattataaccccaagaa 338
                ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||
Sbjct: 27698049 atcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaa 27698102



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 440      ggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 486
                ||||||||||||||||||||||||||||| ||||  || ||||||||
Sbjct: 27698718 ggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 27698764



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 7        cttgagcagcttttcgcgctcgatgaccacacggacaaaataagatg 53
                ||||||||||||||| |||| ||||| ||||||| ||||||||||||
Sbjct: 27696905 cttgagcagcttttcacgcttgatgagcacacgggcaaaataagatg 27696951



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 564      ctggttcacccactaggcaagaagaaccattactgaactcgtatactgactacgaagata 623
                ||||||||||||| ||  |||||||||||||||| || || || ||||| || |||||||
Sbjct: 27699007 ctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagata 27699066

                    
Query: 624      gcat 627
                ||||
Sbjct: 27699067 gcat 27699070

---

>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0011H15
          Length = 130146

 Score =  149 bits (75), Expect = 1e-32
 Identities = 108/119 (90%)
 Strand = Plus / Plus

                                                                         
Query: 164   agggatctgctgacatgcttcccaatttacgtggtggagcttgggatccacacaatcaca 223
             |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 95164 aggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcaca 95223

                                                                        
Query: 224   acgcagttgctacaataactgattcgtcactccacttctgggatctccgttctatgaag 282
             |  || ||||| |||| |||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 95224 attcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaag 95282



 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                         
Query: 53    gtgttctctggtggccactggggaagcatgataagttaattagcatcgatgacagaaaca 112
             ||||||||||||||||||| |||||||| || ||||||||||| || ||||||||||| |
Sbjct: 94873 gtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaata 94932

                                                         
Query: 113   tttttctctggaacatagatccatcaaataaatcagccaaggtg 156
             |||| |||||||| |||||| |||||||||| ||||||||||||
Sbjct: 94933 ttttcctctggaatatagatgcatcaaataagtcagccaaggtg 94976



 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                         
Query: 353   caacagcagaggacgaatttggaattcgtttgtgggatctcagaatgcttaagcatcctc 412
             |||||||||| || |||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct: 95893 caacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctc 95952

                                          
Query: 413   tgaaggatctccctggacattcacattgg 441
             ||||| |||||||||| ||||| ||||||
Sbjct: 95953 tgaagaatctccctgggcattcgcattgg 95981



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                         
Query: 486   gagtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactc 545
             |||||||||||| |||||| |||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 96197 gagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactc 96256

                         
Query: 546   tggacccgaaag 557
              ||||| |||||
Sbjct: 96257 aggacctgaaag 96268



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 285   atcaaatgcaattgaacatgctcatatccgggatgtggattataaccccaagaa 338
             ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||
Sbjct: 95393 atcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaa 95446



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 440   ggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 486
             ||||||||||||||||||||||||||||| ||||  || ||||||||
Sbjct: 96062 ggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 96108



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 7     cttgagcagcttttcgcgctcgatgaccacacggacaaaataagatg 53
             ||||||||||||||| |||| ||||| ||||||| ||||||||||||
Sbjct: 94249 cttgagcagcttttcacgcttgatgagcacacgggcaaaataagatg 94295



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 564   ctggttcacccactaggcaagaagaaccattactgaactcgtatactgactacgaagata 623
             ||||||||||||| ||  |||||||||||||||| || || || ||||| || |||||||
Sbjct: 96351 ctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagata 96410

                 
Query: 624   gcat 627
             ||||
Sbjct: 96411 gcat 96414

---

>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1125_C01
          Length = 123849

 Score =  149 bits (75), Expect = 1e-32
 Identities = 108/119 (90%)
 Strand = Plus / Plus

                                                                         
Query: 164   agggatctgctgacatgcttcccaatttacgtggtggagcttgggatccacacaatcaca 223
             |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 30742 aggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcaca 30801

                                                                        
Query: 224   acgcagttgctacaataactgattcgtcactccacttctgggatctccgttctatgaag 282
             |  || ||||| |||| |||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 30802 attcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaag 30860



 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                         
Query: 53    gtgttctctggtggccactggggaagcatgataagttaattagcatcgatgacagaaaca 112
             ||||||||||||||||||| |||||||| || ||||||||||| || ||||||||||| |
Sbjct: 30451 gtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaata 30510

                                                         
Query: 113   tttttctctggaacatagatccatcaaataaatcagccaaggtg 156
             |||| |||||||| |||||| |||||||||| ||||||||||||
Sbjct: 30511 ttttcctctggaatatagatgcatcaaataagtcagccaaggtg 30554



 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                         
Query: 353   caacagcagaggacgaatttggaattcgtttgtgggatctcagaatgcttaagcatcctc 412
             |||||||||| || |||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct: 31471 caacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctc 31530

                                          
Query: 413   tgaaggatctccctggacattcacattgg 441
             ||||| |||||||||| ||||| ||||||
Sbjct: 31531 tgaagaatctccctgggcattcgcattgg 31559



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                         
Query: 486   gagtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactc 545
             |||||||||||| |||||| |||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 31775 gagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactc 31834

                         
Query: 546   tggacccgaaag 557
              ||||| |||||
Sbjct: 31835 aggacctgaaag 31846



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 285   atcaaatgcaattgaacatgctcatatccgggatgtggattataaccccaagaa 338
             ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||
Sbjct: 30971 atcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaa 31024



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 440   ggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 486
             ||||||||||||||||||||||||||||| ||||  || ||||||||
Sbjct: 31640 ggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 31686



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 7     cttgagcagcttttcgcgctcgatgaccacacggacaaaataagatg 53
             ||||||||||||||| |||| ||||| ||||||| ||||||||||||
Sbjct: 29827 cttgagcagcttttcacgcttgatgagcacacgggcaaaataagatg 29873



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 564   ctggttcacccactaggcaagaagaaccattactgaactcgtatactgactacgaagata 623
             ||||||||||||| ||  |||||||||||||||| || || || ||||| || |||||||
Sbjct: 31929 ctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagata 31988

                 
Query: 624   gcat 627
             ||||
Sbjct: 31989 gcat 31992

---

>ref|NM_106276.3| Arabidopsis thaliana nucleotide binding AT1G76260 mRNA, complete
           cds
          Length = 2050

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 421 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 480
           |||||||| ||| |||| ||||||||||||||  ||   || ||||||||||| ||||| 
Sbjct: 793 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 852

                                                    
Query: 481 attctgagtgctggaacggattcagctgtcaatttatggtt 521
           |||||||| | |||||| || ||||||||||| || |||||
Sbjct: 853 attctgagcgttggaacagactcagctgtcaacttgtggtt 893



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 593 ttactgaactcgtatactgactacgaaga 621
           ||||| ||||| |||||||||||||||||
Sbjct: 964 ttactaaactcttatactgactacgaaga 992

---

>gb|BT010880.1| Arabidopsis thaliana At1g76260 gene, complete cds
          Length = 1053

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 421 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 480
           |||||||| ||| |||| ||||||||||||||  ||   || ||||||||||| ||||| 
Sbjct: 742 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 801

                                                    
Query: 481 attctgagtgctggaacggattcagctgtcaatttatggtt 521
           |||||||| | |||||| || ||||||||||| || |||||
Sbjct: 802 attctgagcgttggaacagactcagctgtcaacttgtggtt 842



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 593 ttactgaactcgtatactgactacgaaga 621
           ||||| ||||| |||||||||||||||||
Sbjct: 913 ttactaaactcttatactgactacgaaga 941

---

>dbj|AK176650.1| Arabidopsis thaliana mRNA for putative WD-repeat protein, complete
           cds, clone: RAFL25-18-N16
          Length = 1305

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 421 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 480
           |||||||| ||| |||| ||||||||||||||  ||   || ||||||||||| ||||| 
Sbjct: 753 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 812

                                                    
Query: 481 attctgagtgctggaacggattcagctgtcaatttatggtt 521
           |||||||| | |||||| || ||||||||||| || |||||
Sbjct: 813 attctgagcgttggaacagactcagctgtcaacttgtggtt 853



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 593 ttactgaactcgtatactgactacgaaga 621
           ||||| ||||| |||||||||||||||||
Sbjct: 924 ttactaaactcttatactgactacgaaga 952

---

>dbj|AK176410.1| Arabidopsis thaliana mRNA for putative WD-repeat protein, complete
           cds, clone: RAFL24-13-L09
          Length = 1341

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 421 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 480
           |||||||| ||| |||| ||||||||||||||  ||   || ||||||||||| ||||| 
Sbjct: 757 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 816

                                                    
Query: 481 attctgagtgctggaacggattcagctgtcaatttatggtt 521
           |||||||| | |||||| || ||||||||||| || |||||
Sbjct: 817 attctgagcgttggaacagactcagctgtcaacttgtggtt 857



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 593 ttactgaactcgtatactgactacgaaga 621
           ||||| ||||| |||||||||||||||||
Sbjct: 928 ttactaaactcttatactgactacgaaga 956

---

>dbj|AK175439.1| Arabidopsis thaliana mRNA for putative WD-repeat protein, complete
           cds, clone: RAFL21-87-A17
          Length = 1337

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 421 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 480
           |||||||| ||| |||| ||||||||||||||  ||   || ||||||||||| ||||| 
Sbjct: 753 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 812

                                                    
Query: 481 attctgagtgctggaacggattcagctgtcaatttatggtt 521
           |||||||| | |||||| || ||||||||||| || |||||
Sbjct: 813 attctgagcgttggaacagactcagctgtcaacttgtggtt 853



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 593 ttactgaactcgtatactgactacgaaga 621
           ||||| ||||| |||||||||||||||||
Sbjct: 924 ttactaaactcttatactgactacgaaga 952

---

>ref|NM_101904.3| Arabidopsis thaliana nucleotide binding AT1G20540 mRNA, complete
           cds
          Length = 1716

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 424 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 483
           ||||| ||| |||||||||| ||||||||  ||   || |||||||||||||  ||||||
Sbjct: 776 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 835

                                        
Query: 484 ctgagtgctggaacggattcagctgtcaa 512
           ||||| |||||||| ||||| | ||||||
Sbjct: 836 ctgagcgctggaacagattcggttgtcaa 864

---

>gb|BT015485.1| Arabidopsis thaliana At1g76260 mRNA sequence
          Length = 1037

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 421 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 480
           |||||||| ||| |||| ||||||||||||||  ||   || |||| |||||| ||||| 
Sbjct: 726 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgggtatgaagagcta 785

                                                    
Query: 481 attctgagtgctggaacggattcagctgtcaatttatggtt 521
           |||||||| | |||||| || ||||||||||| || |||||
Sbjct: 786 attctgagcgttggaacagactcagctgtcaacttgtggtt 826



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 593 ttactgaactcgtatactgactacgaaga 621
           ||||| ||||| |||||||||||||||||
Sbjct: 897 ttactaaactcttatactgactacgaaga 925

---

>gb|BT000290.1| Arabidopsis thaliana unknown protein (At1g20540) mRNA, complete cds
          Length = 1109

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 424 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 483
           ||||| ||| |||||||||| ||||||||  ||   || |||||||||||||  ||||||
Sbjct: 745 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 804

                                        
Query: 484 ctgagtgctggaacggattcagctgtcaa 512
           ||||| |||||||| ||||| | ||||||
Sbjct: 805 ctgagcgctggaacagattcggttgtcaa 833

---

>gb|AY093157.1| Arabidopsis thaliana unknown protein (At1g20540) mRNA, complete cds
          Length = 1235

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 424 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 483
           ||||| ||| |||||||||| ||||||||  ||   || |||||||||||||  ||||||
Sbjct: 778 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 837

                                        
Query: 484 ctgagtgctggaacggattcagctgtcaa 512
           ||||| |||||||| ||||| | ||||||
Sbjct: 838 ctgagcgctggaacagattcggttgtcaa 866

---

>emb|BX817851.1|CNS0ACE1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL45ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1303

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 421 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 480
           |||||||| ||| |||| ||||||||||||||  ||   || ||||||||||  ||||| 
Sbjct: 793 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgtagagcta 852

                                                    
Query: 481 attctgagtgctggaacggattcagctgtcaatttatggtt 521
           |||||||| | |||||| || ||||||||||| || |||||
Sbjct: 853 attctgagcgttggaacagactcagctgtcaacttgtggtt 893



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 593 ttactgaactcgtatactgactacgaaga 621
           ||||| ||||| |||||||||||||||||
Sbjct: 964 ttactaaactcttatactgactacgaaga 992

---

>emb|BX815472.1|CNS0ABIG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1218

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 424 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 483
           ||||| ||| |||||||||| ||||||||  ||   || |||||||||||||  ||||||
Sbjct: 762 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 821

                                        
Query: 484 ctgagtgctggaacggattcagctgtcaa 512
           ||||| |||||||| ||||| | ||||||
Sbjct: 822 ctgagcgctggaacagattcggttgtcaa 850

---

>emb|BX813812.1|CNS0AC4B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1308

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 463 cctgagtatgatgagctgattctgagtgctggaac 497
           |||||||||||||| ||||||||||| ||||||||
Sbjct: 941 cctgagtatgatgaactgattctgagcgctggaac 975



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                       
Query: 293 caattgaacatgctcatatccgggatgtggattataaccccaagaagcaaaacataattg 352
           ||||||||||||||||| | || | ||| ||||| || |||||||   || | ||| |||
Sbjct: 771 caattgaacatgctcatgtacgcggtgttgattacaatcccaagagagaacatatacttg 830

                                                    
Query: 353 caacagcagaggacgaatttggaattcgtttgtgggatctc 393
            ||| |||||||| |||||||| || | ||| |||||||||
Sbjct: 831 taactgcagaggatgaatttggcatacatttctgggatctc 871

---

>ref|XM_866779.1| PREDICTED: Bos taurus similar to cAMP-dependent protein kinase type
            I-alpha regulatory subunit (Tissue-specific
            extinguisher-1) (TSE1) (LOC615074), mRNA
          Length = 4317

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 494  gaacggattcagctgtcaatttatggttgg 523
            |||||| ||||||||||||||| |||||||
Sbjct: 4074 gaacgggttcagctgtcaatttgtggttgg 4045

---

>gb|BC105954.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1,
            progelatinase), mRNA (cDNA clone MGC:126104
            IMAGE:40033171), complete cds
          Length = 1598

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1050 atgaagagatcaaatgcaatt 1030

---

>gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosome 8, complete sequence
          Length = 148213

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   attataaccccaagaagcaaa 343
             |||||||||||||||||||||
Sbjct: 91759 attataaccccaagaagcaaa 91739

---

>ref|NM_002422.3| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase)
            (MMP3), mRNA
          Length = 1828

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1059 atgaagagatcaaatgcaatt 1039

---

>gb|BC074869.2| Homo sapiens matrix metallopeptidase 3 (stromelysin 1,
            progelatinase), mRNA (cDNA clone MGC:104024
            IMAGE:30915468), complete cds
          Length = 1511

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1039 atgaagagatcaaatgcaatt 1019

---

>gb|BC074815.2| Homo sapiens matrix metallopeptidase 3 (stromelysin 1,
            progelatinase), mRNA (cDNA clone MGC:103927
            IMAGE:30915319), complete cds
          Length = 1511

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1039 atgaagagatcaaatgcaatt 1019

---

>gb|BC069716.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1,
            progelatinase), mRNA (cDNA clone MGC:97338
            IMAGE:7262590), complete cds
          Length = 1650

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1057 atgaagagatcaaatgcaatt 1037

---

>gb|BC069676.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1,
            progelatinase), mRNA (cDNA clone MGC:97329
            IMAGE:7262578), complete cds
          Length = 1649

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1057 atgaagagatcaaatgcaatt 1037

---

>gb|AC099012.1| Drosophila melanogaster, chromosome 2R, region 56F-57X, BAC clone
             BACR23F24, complete sequence
          Length = 183592

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 515   tatggttggctaaagttggca 535
             |||||||||||||||||||||
Sbjct: 61128 tatggttggctaaagttggca 61148

---

>gb|AF405705.1|AF405705 Homo sapiens matrix metalloproteinase 3 (stromelysin 1,
            progelatinase) (MMP3) gene, complete cds
          Length = 13003

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 7225 atgaagagatcaaatgcaatt 7205

---

>gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, complete cds, and
             metalloelastase gene, partial cds
          Length = 81826

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   atgaagagatcaaatgcaatt 297
             |||||||||||||||||||||
Sbjct: 52980 atgaagagatcaaatgcaatt 53000

---

>emb|BX816678.1|CNS0ABO8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH62ZB03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1725

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 593  ttactgaactcgtatactgactacgaaga 621
            ||||| ||||| |||||||||||||||||
Sbjct: 1333 ttactaaactcttatactgactacgaaga 1361

---

>dbj|AK223291.1| Homo sapiens mRNA for matrix metalloproteinase 3 preproprotein
            variant, clone: SYN04583
          Length = 1832

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1056 atgaagagatcaaatgcaatt 1036

---

>dbj|AK223283.1| Homo sapiens mRNA for matrix metalloproteinase 3 preproprotein
            variant, clone: SYN03389
          Length = 1813

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1055 atgaagagatcaaatgcaatt 1035

---

>gb|AC105760.3| Homo sapiens BAC clone RP11-346I14 from 2, complete sequence
          Length = 77730

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  ggcagtgatgactctggaccc 552
            |||||||||||||||||||||
Sbjct: 7020 ggcagtgatgactctggaccc 7040

---

>gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, complete sequence
          Length = 198417

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 326    ataaccccaagaagcaaaaca 346
              |||||||||||||||||||||
Sbjct: 160994 ataaccccaagaagcaaaaca 161014

---

>gb|AC012394.3|AC012394 Arabidopsis thaliana chromosome 1 BAC F15M4 genomic sequence, complete
             sequence
          Length = 94487

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 593   ttactgaactcgtatactgactacgaaga 621
             ||||| ||||| |||||||||||||||||
Sbjct: 92824 ttactaaactcttatactgactacgaaga 92796

---

>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I,
             complete sequence
          Length = 97554

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 593   ttactgaactcgtatactgactacgaaga 621
             ||||| ||||| |||||||||||||||||
Sbjct: 68815 ttactaaactcttatactgactacgaaga 68843

---

>gb|AE004543.1| Pseudomonas aeruginosa PAO1, section 104 of 529 of the complete
            genome
          Length = 10589

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1    gcgcagcttgagcagcttttcgcgctcga 29
            |||||||||||||||||| ||||| ||||
Sbjct: 1580 gcgcagcttgagcagcttgtcgcgttcga 1608

---

>gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57 of 73 of the complete
              sequence
          Length = 271902

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 515    tatggttggctaaagttggca 535
              |||||||||||||||||||||
Sbjct: 155389 tatggttggctaaagttggca 155409

---

>dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-725K16, complete
            sequence
          Length = 195874

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 7420 atgaagagatcaaatgcaatt 7440

---

>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete
             sequence
          Length = 103181

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   atgaagagatcaaatgcaatt 297
             |||||||||||||||||||||
Sbjct: 90711 atgaagagatcaaatgcaatt 90731

---

>gb|AC005286.1|AC005286 Drosophila melanogaster DNA sequence (P1s DS01995 (D179), DS03499
             (D217), and DS08132 (D174)), complete sequence
          Length = 173970

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 515   tatggttggctaaagttggca 535
             |||||||||||||||||||||
Sbjct: 67502 tatggttggctaaagttggca 67522

---

>gb|BC107491.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1,
            progelatinase), mRNA (cDNA clone MGC:126103
            IMAGE:40033170), complete cds
          Length = 1600

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1050 atgaagagatcaaatgcaatt 1030

---

>gb|BC107490.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1,
            progelatinase), mRNA (cDNA clone MGC:126102
            IMAGE:40033168), complete cds
          Length = 1600

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1050 atgaagagatcaaatgcaatt 1030

---

>emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chromosome 4, complete
             sequence
          Length = 172327

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   tgacagaaacatttttctctggaac 126
             ||||||| |||||||||||||||||
Sbjct: 43493 tgacagagacatttttctctggaac 43469

---

>emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on chromosome X, complete
             sequence
          Length = 197346

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 104   acagaaacatttttctctggaacat 128
             |||||||||||||||||| ||||||
Sbjct: 26544 acagaaacatttttctctagaacat 26520

---

>emb|X05232.1|HSSTROMR Human mRNA for stromelysin
          Length = 1801

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  atgaagagatcaaatgcaatt 297
            |||||||||||||||||||||
Sbjct: 1037 atgaagagatcaaatgcaatt 1017

---

>gb|J03209.1|HUMMMP3A Human matrix metalloproteinase-3 (MMP-3) mRNA, complete cds
          Length = 1434

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 277 atgaagagatcaaatgcaatt 297
           |||||||||||||||||||||
Sbjct: 994 atgaagagatcaaatgcaatt 974

---

>ref|XM_640600.1| Dictyostelium discoideum ABC transporter A family protein
            (DDB0216250), partial mRNA
          Length = 2514

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  tagatccatcaaataaatca 147
            ||||||||||||||||||||
Sbjct: 1517 tagatccatcaaataaatca 1536

---

>gb|AE017335.3| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence
          Length = 94830

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   aaacataattgcaacagcag 361
             ||||||||||||||||||||
Sbjct: 23069 aaacataattgcaacagcag 23050

---

>gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosome 19, complete sequence
          Length = 210370

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 346    ataattgcaacagcagaggacgaa 369
              |||||||||| |||||||||||||
Sbjct: 161066 ataattgcaaaagcagaggacgaa 161043

---

>gb|AF188935.1| Bacillus anthracis plasmid pXO2, complete sequence
          Length = 96231

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   aaacataattgcaacagcag 361
             ||||||||||||||||||||
Sbjct: 23560 aaacataattgcaacagcag 23541

---

>gb|AC114549.9| Mus musculus chromosome 19, clone RP24-216P17, complete sequence
          Length = 200425

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 346   ataattgcaacagcagaggacgaa 369
             |||||||||| |||||||||||||
Sbjct: 83275 ataattgcaaaagcagaggacgaa 83252

---

>emb|AL391314.21| Human DNA sequence from clone RP11-477H7 on chromosome 10 Contains the 5'
              end of the gene for CamKI-like protein kinase (CKLiK)
              (LOC221042 LOC283070) and a CpG island, complete sequence
          Length = 129435

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 410    ctctgaaggatctccctgga 429
              ||||||||||||||||||||
Sbjct: 117508 ctctgaaggatctccctgga 117489

---

>emb|AL023807.6|HS525L6 Human DNA sequence from clone RP3-525L6 on chromosome 6p22.3-23
             Contains the 5' end of a gene for a kinesin-like protein
             (RBKIN) protein, a ribosomal protein S12 (RPS12)
             pseudogene and a CpG Island, complete sequence
          Length = 168111

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 337   aagcaaaacataattgcaacagca 360
             |||||||||| |||||||||||||
Sbjct: 38560 aagcaaaacacaattgcaacagca 38537

---

>gb|AE011191.1| Bacillus anthracis str. A2012 plasmid pXO2, complete sequence
          Length = 94829

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   aaacataattgcaacagcag 361
             ||||||||||||||||||||
Sbjct: 23069 aaacataattgcaacagcag 23050

---

>gb|AF465310.1| Dictyostelium discoideum ABC transporter ABCA.8 (abca8) gene,
            complete cds
          Length = 4230

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  tagatccatcaaataaatca 147
            ||||||||||||||||||||
Sbjct: 2201 tagatccatcaaataaatca 2220

---

>gb|AF465309.1| Dictyostelium discoideum ABC transporter ABCA.7 (abca7) gene,
            complete cds
          Length = 9751

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 128  tagatccatcaaataaatca 147
            ||||||||||||||||||||
Sbjct: 2030 tagatccatcaaataaatca 2011

---

>gb|AC074250.6| Homo sapiens BAC clone RP11-622A1 from 4, complete sequence
          Length = 199331

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 619    agatagcatctatggaattg 638
              ||||||||||||||||||||
Sbjct: 172034 agatagcatctatggaattg 172053

---

>gb|AC161421.3| Mus musculus BAC clone RP24-424A8 from chromosome 9, complete sequence
          Length = 167449

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 323   attataaccccaagaagcaaaaca 346
             |||||||||||||||| |||||||
Sbjct: 43166 attataaccccaagaaccaaaaca 43189

---

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gcttgagcagcttttcgcgc 25
             ||||||||||||||||||||
Sbjct: 27449 gcttgagcagcttttcgcgc 27430

---

>gb|AC154639.2| Mus musculus BAC clone RP23-306D9 from chromosome 13, complete sequence
          Length = 187693

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   agaaacatttttctctggaa 125
             ||||||||||||||||||||
Sbjct: 52547 agaaacatttttctctggaa 52528

---

>emb|CR385663.1| Gallus gallus finished cDNA, clone ChEST386f12
          Length = 1110

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 108 aaacatttttctctggaaca 127
           ||||||||||||||||||||
Sbjct: 714 aaacatttttctctggaaca 695

---

>gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome 9, complete sequence
          Length = 178684

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 323   attataaccccaagaagcaaaaca 346
             |||||||||||||||| |||||||
Sbjct: 40156 attataaccccaagaaccaaaaca 40133

---

>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00
          Length = 1457619

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    agaaacatttttctctggaa 125
              ||||||||||||||||||||
Sbjct: 411076 agaaacatttttctctggaa 411057

---

>emb|Z70268.1|CET21E8 Caenorhabditis elegans Cosmid T21E8, complete sequence
          Length = 27764

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    catcgatgacagaaacatttttct 119
             |||| |||||||||||||||||||
Sbjct: 25390 catccatgacagaaacatttttct 25413

---

>dbj|AK116985.1| Ciona intestinalis cDNA, clone:cits012l11, full insert sequence
          Length = 1142

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 atttttctctggaacataga 131
           ||||||||||||||||||||
Sbjct: 237 atttttctctggaacataga 256

---

>emb|AL844151.3| Mouse DNA sequence from clone RP23-73O7 on chromosome X, complete
              sequence
          Length = 134513

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 619    agatagcatctatggaattg 638
              ||||||||||||||||||||
Sbjct: 113565 agatagcatctatggaattg 113584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,690,621
Number of Sequences: 3902068
Number of extensions: 5690621
Number of successful extensions: 105077
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104869
Number of HSP's gapped (non-prelim): 197
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---