Clone Name | basd3j10 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ADA3_YEAST (P32494) Transcriptional adapter 3 (NGG1 protein) | 29 | 3.9 | 2 | GHRL_ANGJA (Q8JFY4) Ghrelin precursor (Ghrelin-21) | 29 | 5.2 | 3 | ATS12_HUMAN (P58397) ADAMTS-12 precursor (EC 3.4.24.-) (A disint... | 28 | 8.8 | 4 | THIO_RHIET (O34292) Putative thiamine biosynthesis oxidoreductas... | 28 | 8.8 | 5 | ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote... | 28 | 8.8 |
---|
>ADA3_YEAST (P32494) Transcriptional adapter 3 (NGG1 protein)| Length = 702 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -1 Query: 396 HRPESLTSDRPPETPGTKTPAYSHPGGTNQTLPQRERIIGLHNEQGLET 250 ++ + + D+ P K P +QTLP+ +GL NE+GLE+ Sbjct: 205 NKKQKIDVDKMENDPTVKNPKSEFV--VSQTLPRAAAALGLFNEEGLES 251
>GHRL_ANGJA (Q8JFY4) Ghrelin precursor (Ghrelin-21)| Length = 111 Score = 28.9 bits (63), Expect = 5.2 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +2 Query: 185 MGRRDADGILDILRRP 232 +GRRD+DGILD+ RP Sbjct: 47 VGRRDSDGILDLFMRP 62
>ATS12_HUMAN (P58397) ADAMTS-12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 12) (ADAM-TS 12) (ADAM-TS12) Length = 1593 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 393 RPESLTSDRPPETPGTKTPAYSHPGGT 313 RP LT+ PE+ T TPA S P T Sbjct: 1027 RPRMLTTPTGPESMSTSTPAISSPSPT 1053
>THIO_RHIET (O34292) Putative thiamine biosynthesis oxidoreductase thiO| Length = 327 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -3 Query: 124 LGANWWRGASPSRSHRTGT 68 L A+WW A P HR GT Sbjct: 66 LAADWWEAALPGHVHRRGT 84
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -1 Query: 375 SDRPPETPGTKTPAYSHPGGTNQTLPQ 295 S PP+ PG+++ + SHP + +PQ Sbjct: 749 SQMPPQPPGSQSESSSHPALSQSPMPQ 775 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,998,373 Number of Sequences: 219361 Number of extensions: 1071532 Number of successful extensions: 2554 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2554 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)