ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3j05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z11889.1|MITTARRNG T.aestivum mitochondrion rrn26 gene for rRNA large subunit (26S) Length = 7242 Score = 862 bits (435), Expect = 0.0 Identities = 447/451 (99%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2833 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagat 2892 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2893 ttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 2952 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2953 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 3012 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3013 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 3072 Query: 242 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3073 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 3132 Query: 302 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 3192 Query: 362 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3193 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 3252 Query: 422 ctggttttctaaaaagattggaagatccggc 452 ||||||||||||||||||||||||||||||| Sbjct: 3253 ctggttttctaaaaagattggaagatccggc 3283
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 862 bits (435), Expect = 0.0 Identities = 447/451 (99%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 374674 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagat 374615 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374614 ttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 374555 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374554 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 374495 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374494 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 374435 Query: 242 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374434 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 374375 Query: 302 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374374 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 374315 Query: 362 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374314 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 374255 Query: 422 ctggttttctaaaaagattggaagatccggc 452 ||||||||||||||||||||||||||||||| Sbjct: 374254 ctggttttctaaaaagattggaagatccggc 374224 Score = 862 bits (435), Expect = 0.0 Identities = 447/451 (99%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 262936 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagat 262877 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262876 ttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 262817 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262816 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 262757 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262756 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 262697 Query: 242 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262696 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 262637 Query: 302 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262636 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 262577 Query: 362 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262576 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 262517 Query: 422 ctggttttctaaaaagattggaagatccggc 452 ||||||||||||||||||||||||||||||| Sbjct: 262516 ctggttttctaaaaagattggaagatccggc 262486 Score = 777 bits (392), Expect = 0.0 Identities = 404/408 (99%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 171039 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagat 170980 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170979 ttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 170920 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170919 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 170860 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170859 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 170800 Query: 242 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170799 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 170740 Query: 302 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170739 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 170680 Query: 362 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggg 409 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170679 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggg 170632
>gb|M37274.1|WHTMT26SRR Wheat mitochondrial 26S rRNA gene, complete cds Length = 4103 Score = 862 bits (435), Expect = 0.0 Identities = 447/451 (99%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 498 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagat 557 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 ttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 617 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 677 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 atcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaag 737 Query: 242 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 aaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 797 Query: 302 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 gcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaac 857 Query: 362 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 cgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaa 917 Query: 422 ctggttttctaaaaagattggaagatccggc 452 ||||||||||||||||||||||||||||||| Sbjct: 918 ctggttttctaaaaagattggaagatccggc 948
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 462214 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 462273 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462274 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 462333 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462334 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 462393 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462394 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 462453 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462454 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 462513 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 462514 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 462570 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462571 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 462630 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 462631 actggttttctaaaaagattggaagatccggc 462662 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 381101 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 381160 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381161 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 381220 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381221 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 381280 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381281 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 381340 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381341 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 381400 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 381401 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 381457 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381458 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 381517 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 381518 actggttttctaaaaagattggaagatccggc 381549 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 4 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 58 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236839 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 236785
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 461372 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 461431 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461432 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 461491 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461492 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 461551 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461552 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 461611 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461612 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 461671 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 461672 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 461728 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461729 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 461788 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 461789 actggttttctaaaaagattggaagatccggc 461820 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 380274 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 380333 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380334 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 380393 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380394 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 380453 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380454 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 380513 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380514 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 380573 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 380574 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 380630 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380631 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 380690 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 380691 actggttttctaaaaagattggaagatccggc 380722 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 4 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 58 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236012 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 235958
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 461368 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 461427 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461428 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 461487 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461488 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 461547 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461548 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 461607 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461608 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 461667 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 461668 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 461724 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461725 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 461784 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 461785 actggttttctaaaaagattggaagatccggc 461816 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 380270 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 380329 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380330 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 380389 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380390 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 380449 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380450 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 380509 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380510 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 380569 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 380570 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 380626 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380627 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 380686 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 380687 actggttttctaaaaagattggaagatccggc 380718 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 4 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 58 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236009 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 235955
>dbj|AK108762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G07, full insert sequence Length = 1619 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 7 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 66 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 126 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 186 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 246 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 306 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 363 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 423 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 424 actggttttctaaaaagattggaagatccggc 455
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 461219 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 461278 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461279 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 461338 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461339 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 461398 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461399 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 461458 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461459 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 461518 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 461519 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 461575 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461576 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 461635 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 461636 actggttttctaaaaagattggaagatccggc 461667 Score = 789 bits (398), Expect = 0.0 Identities = 440/452 (97%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 380132 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 380191 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380192 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 380251 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380252 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 380311 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380312 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 380371 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380372 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 380431 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 380432 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 380488 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380489 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 380548 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 380549 actggttttctaaaaagattggaagatccggc 380580 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 4 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 58 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235888 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 235834
>dbj|AK119622.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H07, full insert sequence Length = 2258 Score = 783 bits (395), Expect = 0.0 Identities = 437/449 (97%), Gaps = 4/449 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 73 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 133 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 193 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 253 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 313 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 370 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 430 Query: 421 actggttttctaaaaagattggaagatcc 449 ||||||||||||||||||||||||||||| Sbjct: 431 actggttttctaaaaagattggaagatcc 459
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 773 bits (390), Expect = 0.0 Identities = 438/452 (96%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 33538009 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 33538068 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538069 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 33538128 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538129 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 33538188 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 33538189 aatcaaccgagaccccgttagtagcagcgagcgagagcggaacaagggttttcatcaaaa 33538248 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538249 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 33538308 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 33538309 agcaagcgtag---gctgtgttgccgtagtgcgccctacggagttgtacaaagtcagcaa 33538365 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538366 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 33538425 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 33538426 actggttttctaaaaagattggaagatccggc 33538457 Score = 692 bits (349), Expect = 0.0 Identities = 378/387 (97%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 66 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 125 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499442 ctgtgatcattggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 33499501 Query: 126 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499502 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 33499561 Query: 186 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499562 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 33499621 Query: 246 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499622 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 33499681 Query: 306 gcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 365 |||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499682 gcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 33499738 Query: 366 ttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactgg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499739 ttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactgg 33499798 Query: 426 ttttctaaaaagattggaagatccggc 452 ||||||||||||||||||||||||||| Sbjct: 33499799 ttttctaaaaagattggaagatccggc 33499825 Score = 97.6 bits (49), Expect = 3e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 110 gtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 162 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 34366158 gtggctagtctgcgctctttggacttttcaaacttagcgaactaaaacatctg 34366210
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 773 bits (390), Expect = 0.0 Identities = 438/452 (96%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 83206 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 83265 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83266 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 83325 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83326 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 83385 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 83386 aatcaaccgagaccccgttagtagcagcgagcgagagcggaacaagggttttcatcaaaa 83445 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83446 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 83505 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 83506 agcaagcgtag---gctgtgttgccgtagtgcgccctacggagttgtacaaagtcagcaa 83562 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83563 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 83622 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 83623 actggttttctaaaaagattggaagatccggc 83654 Score = 692 bits (349), Expect = 0.0 Identities = 378/387 (97%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 66 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 125 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44639 ctgtgatcattggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 44698 Query: 126 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44699 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 44758 Query: 186 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44759 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 44818 Query: 246 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44819 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 44878 Query: 306 gcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 365 |||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44879 gcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 44935 Query: 366 ttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactgg 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44936 ttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactgg 44995 Query: 426 ttttctaaaaagattggaagatccggc 452 ||||||||||||||||||||||||||| Sbjct: 44996 ttttctaaaaagattggaagatccggc 45022
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 741 bits (374), Expect = 0.0 Identities = 434/452 (96%), Gaps = 4/452 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 64012 ggatgcccgggcatttagaaggaaggacgctttcagaggtgaaaggccatggggagagag 63953 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63952 agcatccgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 63893 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 63892 gcgctctttggacttttcaaacttagcgaactaaaacatctgagtagctaaaggaaggaa 63833 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63832 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 63773 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 63772 gaaatccggagcagtttcattcgatttgttgtggattggatgatggaaaaactagcaagc 63713 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 63712 agcaagcgtag---gctatgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 63656 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63655 ccattttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 63596 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 63595 actggttttctaaaaagattggaagatccggc 63564
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 741 bits (374), Expect = 0.0 Identities = 434/452 (96%), Gaps = 4/452 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2737236 ggatgcccgggcatttagaaggaaggacgctttcagaggtgaaaggccatggggagagag 2737177 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737176 agcatccgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 2737117 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2737116 gcgctctttggacttttcaaacttagcgaactaaaacatctgagtagctaaaggaaggaa 2737057 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737056 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 2736997 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2736996 gaaatccggagcagtttcattcgatttgttgtggattggatgatggaaaaactagcaagc 2736937 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2736936 agcaagcgtag---gctatgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 2736880 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2736879 ccattttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 2736820 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 2736819 actggttttctaaaaagattggaagatccggc 2736788
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 741 bits (374), Expect = 0.0 Identities = 434/452 (96%), Gaps = 4/452 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2737187 ggatgcccgggcatttagaaggaaggacgctttcagaggtgaaaggccatggggagagag 2737128 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737127 agcatccgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 2737068 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2737067 gcgctctttggacttttcaaacttagcgaactaaaacatctgagtagctaaaggaaggaa 2737008 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737007 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 2736948 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2736947 gaaatccggagcagtttcattcgatttgttgtggattggatgatggaaaaactagcaagc 2736888 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2736887 agcaagcgtag---gctatgttgccgtagcgcgccctacggagttgtacaaagtcagcaa 2736831 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2736830 ccattttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 2736771 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 2736770 actggttttctaaaaagattggaagatccggc 2736739
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 692 bits (349), Expect = 0.0 Identities = 427/452 (94%), Gaps = 17/452 (3%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 400248 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 400307 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400308 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 400367 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400368 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 400427 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400428 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 400487 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400488 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 400547 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 400548 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagca- 400603 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 400604 -----ttggggcgcaagcataggcaacacag-------gacggggtggggcgcgcagtga 400651 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 400652 actggttttctaaaaagattggaagatccggc 400683
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 692 bits (349), Expect = 0.0 Identities = 427/452 (94%), Gaps = 17/452 (3%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 284171 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 284112 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284111 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 284052 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284051 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 283992 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283991 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 283932 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283931 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 283872 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 283871 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagca- 283816 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 283815 -----ttggggcgcaagcataggcaacacag-------gacggggtggggcgcgcagtga 283768 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 283767 actggttttctaaaaagattggaagatccggc 283736 Score = 692 bits (349), Expect = 0.0 Identities = 427/452 (94%), Gaps = 17/452 (3%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 155479 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 155420 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155419 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 155360 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155359 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 155300 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155299 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 155240 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155239 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 155180 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 155179 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagca- 155124 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 155123 -----ttggggcgcaagcataggcaacacag-------gacggggtggggcgcgcagtga 155076 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 155075 actggttttctaaaaagattggaagatccggc 155044
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 692 bits (349), Expect = 0.0 Identities = 427/452 (94%), Gaps = 17/452 (3%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 292882 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 292941 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292942 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 293001 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293002 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 293061 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293062 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 293121 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293122 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 293181 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 293182 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagca- 293237 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 293238 -----ttggggcgcaagcataggcaacacag-------gacggggtggggcgcgcagtga 293285 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 293286 actggttttctaaaaagattggaagatccggc 293317
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 692 bits (349), Expect = 0.0 Identities = 427/452 (94%), Gaps = 17/452 (3%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 265717 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 265776 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265777 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 265836 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265837 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 265896 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265897 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 265956 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265957 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 266016 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 266017 agcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagca- 266072 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 266073 -----ttggggcgcaagcataggcaacacag-------gacggggtggggcgcgcagtga 266120 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 266121 actggttttctaaaaagattggaagatccggc 266152
>gb|K01868.1|MZEMTRG26 Maize mitochondrial 26S rRNA gene and flanks Length = 5218 Score = 676 bits (341), Expect = 0.0 Identities = 426/452 (94%), Gaps = 18/452 (3%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 521 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagag 580 Query: 62 -gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 agcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtct 640 Query: 121 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaa 700 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 760 Query: 241 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 820 Query: 301 agcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaa 360 ||||||||||| | |||||||||||||| ||||||||||||||||||||||||| Sbjct: 821 agcaagcgtag---gctgtgttgccgtagcgcg-cctacggagttgtacaaagtcagca- 875 Query: 361 ccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtga 420 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 876 -----ttggggcgcaagcataggcaacacag-------gacggggtggggcgcgcagtga 923 Query: 421 actggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||| Sbjct: 924 actggttttctaaaaagattggaagatccggc 955
>gb|BT016713.1| Zea mays clone Contig546 mRNA sequence Length = 1257 Score = 646 bits (326), Expect = 0.0 Identities = 404/429 (94%), Gaps = 17/429 (3%) Strand = Plus / Plus Query: 25 aggacgctttcagaggcgaaaggccatggggagatat-gaatctgtgatccatggatctc 83 |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| Sbjct: 9 aggacgctttcagaggcgaaaggccatggggagagagagcgtctgtgatccatggatctc 68 Query: 84 cgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaact 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 cgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaact 128 Query: 144 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 188 Query: 204 gcggcgagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcg 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 gcggcgagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcg 248 Query: 264 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttg 323 |||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 249 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttg 305 Query: 324 ccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatagg 383 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 306 ccgtagcgcgccctacggagttgtacaaagtcagca------ttggggcgcaagcatagg 359 Query: 384 caacacaggactgatgacggggtggggcgcgcagtgaactggttttctaaaaagattgga 443 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 caacacag-------gacggggtggggcgcgcagtgaactggttttctaaaaagattgga 412 Query: 444 agatccggc 452 ||||||||| Sbjct: 413 agatccggc 421
>gb|DQ008806.1| Dioscorea sp. Qiu 94044 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3174 Score = 575 bits (290), Expect = e-161 Identities = 382/410 (93%), Gaps = 7/410 (1%) Strand = Plus / Plus Query: 40 gcgaaaggccatggggagatat-gaatctgtgatccatggatctccgatcgggaaaccgt 98 ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 1 gcgaaaggccatggggagagagagcgtctgtgatccatggatctccgatcgggaaaccgt 60 Query: 99 atccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaaca 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaaca 120 Query: 159 tctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagc 218 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcttagtagctaaaggaaagaaaatcaaccgagaccccgttagtagcggcgagcgagagc 180 Query: 219 ggaacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattg 278 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 181 ggaacaagggtttgaatcaaaagaaatccgaagcgctttcattcgatttgttgtggattg 240 Query: 279 gatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgtagcgcgcccta 338 ||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 241 gatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgtagcgcgcccgg 297 Query: 339 cggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacaggactgat 398 || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 298 atgacttgtacaaagtcagcaaccgttttggggcgcaagcgtaggcaacacaggac---t 354 Query: 399 gacggggtggggcgcgcagtgaactggttttctaaaaagattggaagatc 448 ||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 355 gacggggtggggcgcgcagtgaactggttttctgaaaaggttggaagatc 404
>gb|DQ008807.1| Asparagus officinalis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3153 Score = 571 bits (288), Expect = e-160 Identities = 389/420 (92%), Gaps = 7/420 (1%) Strand = Plus / Plus Query: 30 gctttcagaggcgaaaggccatggggagatat-gaatctgtgatccatggatctccgatc 88 ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| Sbjct: 13 gctttcagaggcgaaaggccatggggagagagagcgtctgtgatccatggatctccgatc 72 Query: 89 gggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcg 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 gggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcg 132 Query: 149 aactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggc 208 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 133 aactgaaacatctgagtagctaaaggaaggaaaatcaaaagagaaaccgttagtagcggc 192 Query: 209 gagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttg 268 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 193 gagcgagagcggaacaagggtttgaatcaaaagaaatccgaagcggtttcattcgatttg 252 Query: 269 ttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgta 328 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 253 ttgtggattggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgta 309 Query: 329 gcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaaca 388 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 310 gcgcgcccggatgacttgtacaaagtcagcaaccgttttggggcgcaagcgtaggcaaca 369 Query: 389 caggactgatgacggggtggggcgcgcagtgaactggttttctaaaaagattggaagatc 448 ||| || | |||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 370 cagtac---ttacggggtggggcgcgcagtgaactggttttctgaaaaggttggaagatc 426
>gb|DQ008808.1| Croomia pauciflora large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3360 Score = 555 bits (280), Expect = e-155 Identities = 397/432 (91%), Gaps = 8/432 (1%) Strand = Plus / Plus Query: 18 agaaggaaggacgctttcagaggcgaaaggccatggggagatat-gaatctgtgatccat 76 ||||||| ||||||||||||||||||||||||||||||||| | | |||||||||||| Sbjct: 1 agaaggatggacgctttcagaggcgaaaggccatggggagagagagcgtctgtgatccat 60 Query: 77 ggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttt 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttt 120 Query: 137 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 180 Query: 197 gttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtt 256 ||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||| Sbjct: 181 gttagtagcggcgagcgagagcggaacaa-ggttttaatcttttgaaaggagaagcggtt 239 Query: 257 tcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttaga 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 240 tcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag---gc 296 Query: 317 aaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaa 376 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 297 tgtgttgccgtagcgcgcccggatgacttgtacaaagtcagcaaccgttttggggcgcaa 356 Query: 377 gcataggcaacacaggactgatgacggggtggggcgcgcagtgaactggttttctaaaaa 436 || |||||||||||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 357 gcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaactggttttctgaaaa 413 Query: 437 gattggaagatc 448 | |||||||||| Sbjct: 414 ggttggaagatc 425
>gb|DQ008814.1| Spathiphyllum wallisii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3166 Score = 492 bits (248), Expect = e-136 Identities = 356/388 (91%), Gaps = 8/388 (2%) Strand = Plus / Plus Query: 38 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 97 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 60 Query: 98 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 157 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tatccaggctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 120 Query: 158 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 217 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 180 Query: 218 cggaacaagggttttcatcaaaagaaa-tccgaagcggtttcattcgatttgttgtggat 276 |||| |||||| || |||| ||| | || ||||||||||||||||||||||||| Sbjct: 181 cggattgggggtttgaataaaaacaaagtgcgttccggtttcattcgatttgttgtggat 240 Query: 277 tggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgtagcgcgccc 336 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 241 tggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgtagcgcgccc 297 Query: 337 tacggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacaggactg 396 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 298 tactgagttgtacaaagtcagcaaccgttttggggcgcaagcgtaggcaacacaggac-- 355 Query: 397 atgacggggtggggcgcgcagtgaactg 424 | ||||||||||||||||||||||||| Sbjct: 356 -ttacggggtggggcgcgcagtgaactg 382
>dbj|D17777.1|RICMTT8613 Oryza sativa mitochondrial gene for 26S ribosomal RNA, partial sequence Length = 314 Score = 492 bits (248), Expect = e-136 Identities = 299/314 (95%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 97 gtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaa 156 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 3 gtatccaagctccgtggctagtctgcgctctttgg-cttttcaancttagcgaactgaaa 61 Query: 157 catctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgaga 216 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 62 catctgagtagctaaaggaaggaaaatcaaccganaccccgttagtagcggcgagcgaga 121 Query: 217 gcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggat 276 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gcggnacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggat 181 Query: 277 tggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgtagcgcgccc 336 ||||||||||||||||||||||||||||||||||| | |||||||||||| | || Sbjct: 182 tggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgtagcgng-cc 237 Query: 337 tacggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacaggactg 396 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 238 tacggagttgtacaaagtcagcaaccgttttggggtgcaagcataggcaacacaggactg 297 Query: 397 atgacggggtgggg 410 ||||||||| |||| Sbjct: 298 atgacggggggggg 311
>gb|DQ008813.1| Orontium aquaticum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3203 Score = 478 bits (241), Expect = e-132 Identities = 333/361 (92%), Gaps = 7/361 (1%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 77 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 137 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaa 244 ||||||||||||||||||||||||||||||||||||| |||||| || |||| ||| Sbjct: 138 aaccgagaccccgttagtagcggcgagcgagagcggattgggggtttgaataaaaacaaa 197 Query: 245 -tccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 303 | || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 gtgcgttccggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 257 Query: 304 aagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccg 363 |||||||| | |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 258 aagcgtag---gctgtgttgccgtagcgcgccctactgagttgtacaaagtcagcaaccg 314 Query: 364 ttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaact 423 ||||||||||||||| |||||||||||| || | |||||||||||||||||||||||| Sbjct: 315 ttttggggcgcaagcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaact 371 Query: 424 g 424 | Sbjct: 372 g 372
>dbj|AK105631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-D06, full insert sequence Length = 1388 Score = 476 bits (240), Expect = e-131 Identities = 266/274 (97%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 179 aaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaa 61 Query: 239 aagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaa 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 aagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaa 121 Query: 299 gcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagc 358 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagc 178 Query: 359 aaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagt 418 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 179 aaccgttttggggcgcaagcataggcaacacaggactgatgacggggcggggcgcgcagt 238 Query: 419 gaactggttttctaaaaagattggaagatccggc 452 |||||||||||||||||||||||||||||||||| Sbjct: 239 gaactggttttctaaaaagattggaagatccggc 272
>gb|DQ008772.1| Cinnamomum camphora large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3629 Score = 389 bits (196), Expect = e-105 Identities = 215/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 88 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 147 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 148 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 207 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 208 atcaaccgagaccccgttagtagcggcgagcgagagcgga 247 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 354
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 389 bits (196), Expect = e-105 Identities = 215/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347973 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 348032 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348033 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 348091 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 348092 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 348151 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 348152 atcaaccgagaccccgttagtagcggcgagcgagagcgga 348191 Score = 389 bits (196), Expect = e-105 Identities = 215/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212000 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 212059 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212060 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 212118 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 212119 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 212178 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 212179 atcaaccgagaccccgttagtagcggcgagcgagagcgga 212218 Score = 389 bits (196), Expect = e-105 Identities = 215/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129205 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 129146 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129145 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 129087 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 129086 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 129027 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 129026 atcaaccgagaccccgttagtagcggcgagcgagagcgga 128987 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348258 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 348305 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212285 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 212332 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128920 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 128873 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 7 cccgggcattgagaaggaaggacgctttcagag 39 ||||||||||||||||||||||||||||||||| Sbjct: 85508 cccgggcattgagaaggaaggacgctttcagag 85540
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 389 bits (196), Expect = e-105 Identities = 215/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497350 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 497291 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497290 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 497232 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 497231 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 497172 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 497171 atcaaccgagaccccgttagtagcggcgagcgagagcgga 497132 Score = 389 bits (196), Expect = e-105 Identities = 215/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323840 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 323781 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323780 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 323722 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 323721 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 323662 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 323661 atcaaccgagaccccgttagtagcggcgagcgagagcgga 323622 Score = 389 bits (196), Expect = e-105 Identities = 215/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131324 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 131265 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131264 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 131206 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131205 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 131146 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 131145 atcaaccgagaccccgttagtagcggcgagcgagagcgga 131106 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497065 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 497018 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323555 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 323508 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131039 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 130992 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 7 cccgggcattgagaaggaaggacgctttcagag 39 ||||||||||||||||||||||||||||||||| Sbjct: 269486 cccgggcattgagaaggaaggacgctttcagag 269454 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 7 cccgggcattgagaaggaaggacgctttcagag 39 ||||||||||||||||||||||||||||||||| Sbjct: 76970 cccgggcattgagaaggaaggacgctttcagag 76938
>gb|AF290292.1|AF290292 Cucumis sativus clone R36R mitochondrial genomic sequence Length = 700 Score = 381 bits (192), Expect = e-102 Identities = 214/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 428 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagagaa 369 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 -agtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 310 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 309 cgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaaggaagggaa 250 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 249 atcaaccgagaccccgttagtagcggcgagcgagagcgga 210
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 381 bits (192), Expect = e-102 Identities = 214/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417633 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 417692 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417693 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 417751 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 417752 cgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaaggaagggaa 417811 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 417812 atcaaccgagaccccgttagtagcggcgagcgagagcgga 417851 Score = 381 bits (192), Expect = e-102 Identities = 214/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66883 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 66942 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66943 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 67001 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 67002 cgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaaggaagggaa 67061 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 67062 atcaaccgagaccccgttagtagcggcgagcgagagcgga 67101 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417920 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 417967 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67170 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 67217
>emb|X02559.1|MIOBRN26 Oenothera berteriana mitochondrial gene for 26S ribosomal RNA Length = 3672 Score = 381 bits (192), Expect = e-102 Identities = 214/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 298 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 357 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 358 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 417 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||| ||||||||||||||||||||||||||| Sbjct: 418 atcaaccgagactccgttagtagcggcgagcgagagcgga 457 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 559 ggtttcattcgatttgttgtggattggatgatggataaaccagcaagc 606
>gb|L34218.1|POTRGTRRN Solanum tubersum mitochondrial 26S ribosomal RNA (rrn26) gene Length = 541 Score = 373 bits (188), Expect = e-100 Identities = 214/220 (97%), Gaps = 2/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 351 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 410 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 411 cgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaaggaagg-aa 469 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 470 atcaaccgagaccccgttagtagcggcgagcgagagcgga 509
>gb|DQ008792.1| Saururus cernuus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3662 Score = 373 bits (188), Expect = e-100 Identities = 213/220 (96%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 83 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 84 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagcagcgtggctagtctg 142 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 143 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaa 202 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 203 atcaaccgagaccccgttagtagcggcgagcgagagcgga 242 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 351
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 365 bits (184), Expect = 8e-98 Identities = 212/220 (96%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12074 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 12015 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12014 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 11956 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 11955 cgctctttggactttgaaaacttagcgaactgaaacatctaagtagctaaaggaagggaa 11896 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11895 atcaaccgagaccccgttagtagcggcgagcgagagcgga 11856 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 ||||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 11792 ggtttcattcgatttattgtggattggatgatggaaaaaccagaaagc 11745 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gtgatccatggatctccgatc 88 ||||||||||||||||||||| Sbjct: 38160 gtgatccatggatctccgatc 38140
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 365 bits (184), Expect = 8e-98 Identities = 212/220 (96%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119884 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 119943 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119944 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 120002 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 120003 cgctctttggactttgaaaacttagcgaactgaaacatctaagtagctaaaggaagggaa 120062 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 120063 atcaaccgagaccccgttagtagcggcgagcgagagcgga 120102 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 120166 ggtttcattcgatttcttgtggattggatgatggaaaaaccagcaagc 120213
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 365 bits (184), Expect = 8e-98 Identities = 212/220 (96%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41502 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatac 41561 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41562 cg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctg 41620 Query: 122 cgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaa 181 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 41621 cgctctttggactttgaaaacttagcgaactgaaacatctaagtagctaaaggaagggaa 41680 Query: 182 atcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||| Sbjct: 41681 atcaaccgagaccccgttagtagcggcgagcgagagcgga 41720 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 41784 ggtttcattcgatttcttgtggattggatgatggaaaaaccagcaagc 41831
>gb|DQ008743.1| Buxus sempervirens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3113 Score = 349 bits (176), Expect = 5e-93 Identities = 198/204 (97%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 18 agaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatg 77 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1 agaaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatg 59 Query: 78 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 119 Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 120 caaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccg 179 Query: 198 ttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||| Sbjct: 180 ttagtagcggcgagcgagagcgga 203 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 348
>gb|DQ008777.1| Doryphora sassafras large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3353 Score = 345 bits (174), Expect = 8e-92 Identities = 196/202 (97%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 20 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 79 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatgga 59 Query: 80 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 119 Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 200 agtagcggcgagcgagagcgga 221 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 317
>gb|DQ008773.1| Laurus nobilis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3419 Score = 343 bits (173), Expect = 3e-91 Identities = 195/201 (97%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 21 aggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggat 80 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggat 59 Query: 81 ctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaa 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaa 119 Query: 141 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 200 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 120 acttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtta 179 Query: 201 gtagcggcgagcgagagcgga 221 ||||||||||||||||||||| Sbjct: 180 gtagcggcgagcgagagcgga 200 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 307
>gb|DQ008774.1| Cryptocarya meissneriana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3504 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 59 Query: 86 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 119 Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 120 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 179 Query: 206 ggcgagcgagagcgga 221 |||||||||||||||| Sbjct: 180 ggcgagcgagagcgga 195 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 318
>gb|DQ008770.1| Gyrocarpus americanus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3487 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 60 Query: 86 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 120 Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 121 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 180 Query: 206 ggcgagcgagagcgga 221 |||||||||||||||| Sbjct: 181 ggcgagcgagagcgga 196 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 319
>gb|DQ008755.1| Podophyllum peltatum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3164 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 59 Query: 86 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 119 Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 120 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 179 Query: 206 ggcgagcgagagcgga 221 |||||||||||||||| Sbjct: 180 ggcgagcgagagcgga 195 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggtttcattcgatctgttgtggattggatgatggaaaaaccagcaagcagcaagc 319
>gb|DQ008754.1| Mahonia bealei large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3500 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 61 Query: 86 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 121 Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 181 Query: 206 ggcgagcgagagcgga 221 |||||||||||||||| Sbjct: 182 ggcgagcgagagcgga 197 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 321
>gb|DQ008796.1| Aristolochia macrophylla large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3132 Score = 337 bits (170), Expect = 2e-89 Identities = 195/202 (96%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 20 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 79 ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 1 aaggatggacgctttcagaggcgaaaggccatggggagagaccg-tctgtgatccatgga 59 Query: 80 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 119 Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 200 agtagcggcgagcgagagcgga 221 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ggtttcattctttttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 384
>gb|DQ008828.1| Nymphaea sp. Qiu 91029 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3388 Score = 333 bits (168), Expect = 3e-88 Identities = 190/196 (96%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3 ggacgctttctgaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 61 Query: 86 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 121 Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 181 Query: 206 ggcgagcgagagcgga 221 |||||||||||||||| Sbjct: 182 ggcgagcgagagcgga 197 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 ggtttcattcgatttgttgtggattggatgatggaaaaacc 597
>gb|DQ008769.1| Hedycarya arborea large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3451 Score = 333 bits (168), Expect = 3e-88 Identities = 190/196 (96%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 63 Query: 86 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 64 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttaaaactta 123 Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 124 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 183 Query: 206 ggcgagcgagagcgga 221 |||||||||||||||| Sbjct: 184 ggcgagcgagagcgga 199 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 322
>gb|DQ008788.1| Galbulimima belgraveana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3224 Score = 327 bits (165), Expect = 2e-86 Identities = 197/205 (96%), Gaps = 2/205 (0%) Strand = Plus / Plus Query: 18 agaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatg 77 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1 agaaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatg 59 Query: 78 gatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttt 136 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 60 gatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttt 119 Query: 137 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 196 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 120 tcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagacccc 179 Query: 197 gttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||| Sbjct: 180 gttagtagcggcgagcgagagcgga 204 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 308
>gb|DQ008819.1| Chloranthus multistachys large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3339 Score = 325 bits (164), Expect = 7e-86 Identities = 195/204 (95%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 18 agaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatg 77 ||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1 agaaggatggacgcttgaagaggcgaaaggccatggggagataccg-tctgtgatccatg 59 Query: 78 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 119 Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 120 caaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccg 179 Query: 198 ttagtagcggcgagcgagagcgga 221 | |||||||||||||||||||||| Sbjct: 180 tgagtagcggcgagcgagagcgga 203 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 319
>gb|DQ008746.1| Trochodendron aralioides large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3180 Score = 325 bits (164), Expect = 7e-86 Identities = 183/188 (97%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 34 tcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaa 93 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7 tcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaa 65 Query: 94 accgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactg 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 accgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactg 125 Query: 154 aaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcg 213 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 126 aaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcg 185 Query: 214 agagcgga 221 |||||||| Sbjct: 186 agagcgga 193 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309
>dbj|AK063521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H08, full insert sequence Length = 2553 Score = 325 bits (164), Expect = 7e-86 Identities = 187/194 (96%), Gaps = 3/194 (1%) Strand = Plus / Plus Query: 259 attcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaa 318 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1 attcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtaggctgt-- 58 Query: 319 agttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagc 378 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 -gttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagc 117 Query: 379 ataggcaacacaggactgatgacggggtggggcgcgcagtgaactggttttctaaaaaga 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 ataggcaacacaggactgatgacggggtggggcgcgcagtgaactggttttctaaaaaga 177 Query: 439 ttggaagatccggc 452 |||||||||||||| Sbjct: 178 ttggaagatccggc 191
>gb|DQ008809.1| Carludovica palmata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3171 Score = 323 bits (163), Expect = 3e-85 Identities = 163/163 (100%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 84 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 144 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcggaacaagg 227 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 aaccgagaccccgttagtagcggcgagcgagagcggaacaagg 187 Score = 258 bits (130), Expect = 1e-65 Identities = 194/214 (90%), Gaps = 6/214 (2%) Strand = Plus / Plus Query: 235 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 260 Query: 295 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 354 ||||||||||||||||| | ||||||||||||||||| || ||||||||||| Sbjct: 261 gcaagcagcaagcgtag---gctgtgttgccgtagcgcgcccggatgacttgtacaaagt 317 Query: 355 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcg 414 |||||||||||||||||||||||| |||||||||||| || | ||||||||||||||| Sbjct: 318 cagcaaccgttttggggcgcaagcgtaggcaacacagtac---ttacggggtggggcgcg 374 Query: 415 cagtgaactggttttctaaaaagattggaagatc 448 ||||||||||||||||| ||||| |||||||||| Sbjct: 375 cagtgaactggttttctgaaaaggttggaagatc 408
>gb|DQ008742.1| Pachysandra procumbens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3132 Score = 323 bits (163), Expect = 3e-85 Identities = 182/187 (97%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 35 cagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaa 94 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 cagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaa 59 Query: 95 ccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactga 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactga 119 Query: 155 aacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcga 214 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 120 aacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcga 179 Query: 215 gagcgga 221 ||||||| Sbjct: 180 gagcgga 186 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 337
>gb|DQ008798.1| Lactoris fernandeziana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3351 Score = 321 bits (162), Expect = 1e-84 Identities = 193/202 (95%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 20 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 79 ||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1 aaggatggacgctttctgaggcgaaaggccatggggagagaccg-tctgtgatccatgga 59 Query: 80 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 139 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcggtaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 119 Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 200 agtagcggcgagcgagagcgga 221 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 303 |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 270 ggtttcattcgatttgttatggattggatgatggaaaaaccagcaagcagc 320
>gb|DQ008784.1| Cananga odorata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3537 Score = 321 bits (162), Expect = 1e-84 Identities = 194/202 (96%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 21 aggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggat 80 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggat 59 Query: 81 ctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttca 139 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 60 ctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttca 119 Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 200 agtagcggcgagcgagagcgga 221 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 313
>gb|DQ008783.1| Annona muricata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3404 Score = 321 bits (162), Expect = 1e-84 Identities = 194/202 (96%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 21 aggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggat 80 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggat 59 Query: 81 ctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttca 139 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 60 ctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttca 119 Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 200 agtagcggcgagcgagagcgga 221 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 306
>gb|DQ008766.1| Ceratophyllum demersum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3548 Score = 321 bits (162), Expect = 1e-84 Identities = 193/202 (95%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 20 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 79 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatgga 59 Query: 80 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 139 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcgggaaaccgtatccaagcggagtggctagtctgcgctctttggacttttca 119 Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 200 agtagcggcgagcgagagcgga 221 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 273 ggattggatgatggaaaaaccagcaagcagcaag 306 ||||||||||||||||||||| |||||||||||| Sbjct: 378 ggattggatgatggaaaaacctgcaagcagcaag 411
>gb|DQ008815.1| Pleea tenuifolia large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3186 Score = 317 bits (160), Expect = 2e-83 Identities = 179/184 (97%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 38 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 97 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 59 Query: 98 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 119 Query: 158 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 217 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 179 Query: 218 cgga 221 |||| Sbjct: 180 cgga 183 Score = 224 bits (113), Expect = 2e-55 Identities = 159/173 (91%), Gaps = 6/173 (3%) Strand = Plus / Plus Query: 252 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 281 Query: 312 ttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttgggg 371 | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 282 gctgt---gttgccgtagcgcgccctactgagttgtacaaagtcagcaaccgttttgggg 338 Query: 372 cgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactg 424 ||||||| |||||||||||| || | ||||||||||||||||||||||||| Sbjct: 339 cgcaagcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaactg 388
>gb|DQ008761.1| Akebia quinata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3422 Score = 317 bits (160), Expect = 2e-83 Identities = 179/184 (97%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 38 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 97 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 59 Query: 98 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 119 Query: 158 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 217 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 179 Query: 218 cgga 221 |||| Sbjct: 180 cgga 183 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300
>gb|DQ008752.1| Platanus occidentalis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3351 Score = 317 bits (160), Expect = 2e-83 Identities = 179/184 (97%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 38 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 97 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 60 Query: 98 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 120 Query: 158 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 217 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 180 Query: 218 cgga 221 |||| Sbjct: 181 cgga 184 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 302
>gb|DQ008789.1| Myristica fragrans large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3651 Score = 315 bits (159), Expect = 7e-83 Identities = 188/195 (96%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 28 acgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgat 87 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 acgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgat 59 Query: 88 cgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttcaaacttag 146 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 cgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttcaaacttag 119 Query: 147 cgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcg 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 cgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcg 179 Query: 207 gcgagcgagagcgga 221 ||||||||||||||| Sbjct: 180 gcgagcgagagcgga 194 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 310
>dbj|AK064285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G10, full insert sequence Length = 2011 Score = 315 bits (159), Expect = 7e-83 Identities = 182/189 (96%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 264 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttg 323 |||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtaggctgt---gttg 57 Query: 324 ccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatagg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 ccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatagg 117 Query: 384 caacacaggactgatgacggggtggggcgcgcagtgaactggttttctaaaaagattgga 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 caacacaggactgatgacggggtggggcgcgcagtgaactggttttctaaaaagattgga 177 Query: 444 agatccggc 452 ||||||||| Sbjct: 178 agatccggc 186
>gb|DQ008786.1| Liriodendron chinense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3474 Score = 311 bits (157), Expect = 1e-81 Identities = 189/197 (95%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 2 ggacgctttcagaggcgaaaggccatggggagagaccg-tctgtgatccatggatctccg 60 Query: 86 atcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttcaaactt 144 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttcaaactt 120 Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 121 agcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtag 180 Query: 205 cggcgagcgagagcgga 221 ||||||||||||||||| Sbjct: 181 cggcgagcgagagcgga 197 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 309
>gb|DQ008757.1| Xanthorhiza simplicissima large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3433 Score = 311 bits (157), Expect = 1e-81 Identities = 179/185 (96%), Gaps = 1/185 (0%) Strand = Plus / Plus Query: 37 gaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaacc 96 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1 gaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaacc 59 Query: 97 gtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaa 156 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 60 gtatccaagctccgtggctagtctgcgctctttggactttttaaacttagcgaactgaaa 119 Query: 157 catctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgaga 216 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 120 catctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgaga 179 Query: 217 gcgga 221 ||||| Sbjct: 180 gcgga 184 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 365
>gb|DQ008745.1| Tetracentron sinense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3158 Score = 311 bits (157), Expect = 1e-81 Identities = 176/181 (97%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 41 cgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtat 100 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtat 59 Query: 101 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 119 Query: 161 tgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 220 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 tgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 179 Query: 221 a 221 | Sbjct: 180 a 180 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 296
>gb|DQ008744.1| Didymeles perrieri large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3161 Score = 311 bits (157), Expect = 1e-81 Identities = 176/181 (97%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 41 cgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtat 100 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtat 59 Query: 101 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 119 Query: 161 tgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 220 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 tgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 179 Query: 221 a 221 | Sbjct: 180 a 180 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 377
>gb|DQ008775.1| Atherosperma moschatum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3333 Score = 307 bits (155), Expect = 2e-80 Identities = 174/179 (97%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 43 aaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatcc 102 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatcc 59 Query: 103 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 119 Query: 163 agtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 178 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 301
>gb|DQ008760.1| Lardizabala biternata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3423 Score = 307 bits (155), Expect = 2e-80 Identities = 174/179 (97%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 43 aaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatcc 102 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatcc 59 Query: 103 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 119 Query: 163 agtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 178 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309
>gb|DQ008756.1| Ranunculus sp. Qiu 95-024 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3371 Score = 307 bits (155), Expect = 2e-80 Identities = 174/179 (97%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 43 aaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatcc 102 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatcc 59 Query: 103 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 119 Query: 163 agtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 178 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 371
>gb|DQ008804.1| Canella winterana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3188 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 68 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 69 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 128 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 129 aaccgagaccccgttagtagcggcgagcgagagcgga 165 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 278
>gb|DQ008803.1| Takhtajania perrieri large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3692 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 87 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 147 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 148 aaccgagaccccgttagtagcggcgagcgagagcgga 184 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 301
>gb|DQ008763.1| Euptelea polyandra large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3374 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 73 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 74 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 133 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 134 aaccgagaccccgttagtagcggcgagcgagagcgga 170 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 293
>gb|DQ008759.1| Cocculus trilobus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3399 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 71 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 72 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 131 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 132 aaccgagaccccgttagtagcggcgagcgagagcgga 168 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 303 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 336
>gb|DQ008753.1| Nelumbo nucifera large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3363 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 73 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 74 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 133 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 134 aaccgagaccccgttagtagcggcgagcgagagcgga 170 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 288
>gb|DQ008751.1| Grevillea robusta large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3805 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 71 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 72 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 131 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 132 aaccgagaccccgttagtagcggcgagcgagagcgga 168 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 380
>gb|DQ008750.1| Persoonia katerae large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3782 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 63 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 64 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 123 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 124 aaccgagaccccgttagtagcggcgagcgagagcgga 160 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 359
>gb|DQ008747.1| Sabia sp. Qiu 91025 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3596 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 78 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 138 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 139 aaccgagaccccgttagtagcggcgagcgagagcgga 175 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 298
>gb|DQ008765.1| Sanguinaria canadensis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3316 Score = 301 bits (152), Expect = 1e-78 Identities = 174/180 (96%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 42 gaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatc 101 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatc 59 Query: 102 caagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatct 161 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 60 caagctccgtggctagtctgcgctctttggacttttaaaacttagcgaactgaaacatct 119 Query: 162 gagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 179 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 295
>gb|DQ008820.1| Sarcandra chloranthoides large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3783 Score = 295 bits (149), Expect = 6e-77 Identities = 155/157 (98%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 69 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 70 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 129 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||| |||||||||||||||||||||| Sbjct: 130 aaccgagaccccgtgagtagcggcgagcgagagcgga 166 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 235 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagctgcaagc 289
>gb|DQ008749.1| Petrophile canescens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3733 Score = 295 bits (149), Expect = 6e-77 Identities = 155/157 (98%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 73 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 74 tctttggacttttaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 133 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 134 aaccgagaccccgttagtagcggcgagcgagagcgga 170 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 437
>gb|DQ008805.1| Cinnamodendron ekmanii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3037 Score = 293 bits (148), Expect = 3e-76 Identities = 151/152 (99%) Strand = Plus / Plus Query: 70 gatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctcttt 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctcttt 60 Query: 130 ggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccg 189 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 ggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccg 120 Query: 190 agaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||| Sbjct: 121 agaccccgttagtagcggcgagcgagagcgga 152 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 273 ggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||| Sbjct: 226 ggattggatgatggaaaaaccagcaagcagcaagc 260
>gb|DQ008764.1| Dicentra sp. Qiu 95026 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3297 Score = 293 bits (148), Expect = 3e-76 Identities = 154/156 (98%) Strand = Plus / Plus Query: 66 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 60 Query: 126 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 185 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 61 ctttggacttttaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatca 120 Query: 186 accgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||| Sbjct: 121 accgagaccccgttagtagcggcgagcgagagcgga 156 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 296
>gb|DQ008758.1| Cissampelos pareira large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3375 Score = 287 bits (145), Expect = 2e-74 Identities = 154/157 (98%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 68 Query: 125 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 184 |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 69 tctttggactttgaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 128 Query: 185 aaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||||| Sbjct: 129 aaccgagaccccgttagtagcggcgagcgagagcgga 165 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 303 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 333
>gb|DQ008810.1| Potamogeton berchtoldii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2954 Score = 285 bits (144), Expect = 6e-74 Identities = 175/184 (95%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 38 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 97 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 59 Query: 98 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 157 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tatccaagctccgtgtcccgtctgcgctctttggacttttcaaacttagcgaactgaaac 119 Query: 158 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 217 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 120 atctgagtagctaaaggaagggaaatcaaccgagaccccgtgagtagcggcgagcgagag 179 Query: 218 cgga 221 |||| Sbjct: 180 cgga 183 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 252 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 250 Score = 60.0 bits (30), Expect = 7e-06 Identities = 85/102 (83%), Gaps = 6/102 (5%) Strand = Plus / Plus Query: 323 gccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatag 382 |||||||||||||| || ||||||||||||||||||| |||||||||||| | | Sbjct: 274 gccgtagcgcgcccggatgacttgtacaaagtcagcaacc----tggggcgcaagcgtgg 329 Query: 383 gcaacacaggactgatgacggggtggggcgcgcagtgaactg 424 || |||||| || | ||||||||||||||||||||||||| Sbjct: 330 gccacacagtacg--tcacggggtggggcgcgcagtgaactg 369
>gb|DQ008785.1| Eupomatia bennettii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3304 Score = 281 bits (142), Expect = 1e-72 Identities = 155/158 (98%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcg 123 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 2 tctgtgatccatggatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcg 61 Query: 124 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaat 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 62 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaat 121 Query: 184 caaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||| Sbjct: 122 caaccgagaccccgttagtagcggcgagcgagagcgga 159 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 263
>gb|DQ008741.1| Magnolia tripetala large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3462 Score = 281 bits (142), Expect = 1e-72 Identities = 155/158 (98%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 65 tctgtgatccatggatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcg 123 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 1 tctgtgatccatggatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcg 60 Query: 124 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaat 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 61 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaat 120 Query: 184 caaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccgagaccccgttagtagcggcgagcgagagcgga 158 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 270
>gb|DQ008787.1| Degeneria vitiensis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3368 Score = 262 bits (132), Expect = 9e-67 Identities = 145/148 (97%), Gaps = 1/148 (0%) Strand = Plus / Plus Query: 75 atggatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggac 133 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1 atggatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggac 60 Query: 134 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagac 193 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagac 120 Query: 194 cccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||| Sbjct: 121 cccgttagtagcggcgagcgagagcgga 148 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 260
>gb|DQ008781.1| Chimonanthus praecox large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3531 Score = 260 bits (131), Expect = 4e-66 Identities = 134/135 (99%) Strand = Plus / Plus Query: 87 tcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttag 60 Query: 147 cgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcg 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 cgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcg 120 Query: 207 gcgagcgagagcgga 221 ||||||||||||||| Sbjct: 121 gcgagcgagagcgga 135 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 254
>gb|DQ008812.1| Alisma plantago-aquatica large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2838 Score = 254 bits (128), Expect = 2e-64 Identities = 168/180 (93%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 42 gaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatc 101 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatc 59 Query: 102 caagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatct 161 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 caagctccgtgtcccgtctgcgctctttggacttttcaaacttagcgaactgaaacatct 119 Query: 162 gagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 120 ccgtagctaaaggaagggaaatcaaccgagaccccgtccgtagcggcgagcgagagcgga 179 Score = 89.7 bits (45), Expect = 7e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 252 cggtttcattcgatttgttgtggattggatgatggaaaaaccagc 296 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cggtttcattcgatttgttgtggattggatgatggaaaaaccagc 253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 43/48 (89%), Gaps = 4/48 (8%) Strand = Plus / Plus Query: 344 ttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacag 391 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 303 ttgtacaaagtcagcaacc----tggggcgcaagcgtaggcaacacag 346
>gb|DQ008802.1| Tasmannia insipida large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3698 Score = 250 bits (126), Expect = 3e-63 Identities = 129/130 (99%) Strand = Plus / Plus Query: 92 aaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaac 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaac 60 Query: 152 tgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgag 211 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61 tgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgag 120 Query: 212 cgagagcgga 221 |||||||||| Sbjct: 121 cgagagcgga 130 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 247
>gb|DQ008838.1| Ginkgo biloba large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2815 Score = 242 bits (122), Expect = 8e-61 Identities = 168/182 (92%), Gaps = 1/182 (0%) Strand = Plus / Plus Query: 40 gcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgta 99 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgta 59 Query: 100 tccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacat 159 |||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||| Sbjct: 60 tccaagctccgtggctagtccgcgccccttggactttcaaaacttagcgaactgaaacat 119 Query: 160 ctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcg 219 || |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 120 ctaagtagctagaggaaggggaatcaaccgagaccccgttagtagcggcgagcgaaagcg 179 Query: 220 ga 221 || Sbjct: 180 ga 181
>gb|DQ008811.1| Triglochin maritimum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2937 Score = 240 bits (121), Expect = 3e-60 Identities = 136/141 (96%) Strand = Plus / Plus Query: 81 ctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaa 140 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1 ctccgatcgggaaaccgtatccaagctccgtgtcccgtctgcgctctttggacttttcaa 60 Query: 141 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 200 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 61 acttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtga 120 Query: 201 gtagcggcgagcgagagcgga 221 ||||||||||||||||||||| Sbjct: 121 gtagcggcgagcgagagcgga 141 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 252 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 214 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/103 (87%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 323 gccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatag 382 |||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 238 gccgtagcgcgcccggatgacttgtacaaagtaagcaaccgttttggggcgcaagcgtag 297 Query: 383 gcaacacaggactgatgacggggtggggcgcgcagtgaactgg 425 || |||||| || | |||||||||||||||||||||||||| Sbjct: 298 gccacacagtac--gtcacggggtggggcgcgcagtgaactgg 338
>gb|DQ008801.1| Drimys winteri large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3734 Score = 234 bits (118), Expect = 2e-58 Identities = 121/122 (99%) Strand = Plus / Plus Query: 100 tccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacat 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacat 60 Query: 160 ctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcg 219 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcg 120 Query: 220 ga 221 || Sbjct: 121 ga 122 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 239
>gb|DQ008816.1| Tofieldia calyculata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3092 Score = 224 bits (113), Expect = 2e-55 Identities = 159/173 (91%), Gaps = 6/173 (3%) Strand = Plus / Plus Query: 252 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 163 Query: 312 ttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttgggg 371 | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 164 gctgt---gttgccgtagcgcgccctactgagttgtacaaagtcagcaaccgttttgggg 220 Query: 372 cgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactg 424 ||||||| |||||||||||| || | ||||||||||||||||||||||||| Sbjct: 221 cgcaagcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaactg 270 Score = 113 bits (57), Expect = 5e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 161 tgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 220 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 60 Query: 221 a 221 | Sbjct: 61 a 61
>gb|DQ008829.1| Nuphar sp. Qiu M114 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3157 Score = 204 bits (103), Expect = 2e-49 Identities = 113/115 (98%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 107 tccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagta 166 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1 tccgtggctagtctgcgctctttg-acttttcaaacttagcgaactgaaacatctgagta 59 Query: 167 gctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 114 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ggtttcattcgatttgttgtggattggatgatggaaaaacc 401
>gb|DQ008831.1| Cabomba sp. Qiu 97027 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3222 Score = 192 bits (97), Expect = 7e-46 Identities = 103/105 (98%) Strand = Plus / Plus Query: 117 gtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaa 176 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95 gtctgcgctctttggactttgcaaacttagcgaactgaaacatctgagtagctaaaggaa 154 Query: 177 ggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 gggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 199 Score = 121 bits (61), Expect = 2e-24 Identities = 77/81 (95%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 26 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 85 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 63 Query: 86 atcgggaaaccgtatccaagc 106 ||||||||||||||||||||| Sbjct: 64 atcgggaaaccgtatccaagc 84 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 ggtttcattcgatttgttgtggattggatgatggaaaaacc 585
>emb|BX000345.4|CNS08CDB Oryza sativa chromosome 12, . BAC OSJNBb0111J10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128678 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Plus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 180 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 47533 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 47591 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 47592 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 47651 Query: 241 gaaatcc 247 ||||||| Sbjct: 47652 gaaatcc 47658
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 180 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 6210081 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 6210023 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 6210022 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 6209963 Query: 241 gaaatcc 247 ||||||| Sbjct: 6209962 gaaatcc 6209956 Score = 155 bits (78), Expect = 1e-34 Identities = 115/126 (91%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaa 182 |||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 6492577 gctctttgaacttttcaaacttagcgaactggaacatatgaggtgctaaaggaaggaaaa 6492636 Query: 183 tcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaaga 242 |||||||||| ||||| |||| |||||||||||| ||||| |||||||||||||||||| Sbjct: 6492637 tcaaccgaga-cccgtcagtaacggcgagcgagaacggaatgagggttttcatcaaaaga 6492695 Query: 243 aatccg 248 |||||| Sbjct: 6492696 aatccg 6492701 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 233 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13457810 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 13457751 Query: 293 cagcaagcagcaag 306 |||||||||||||| Sbjct: 13457750 cagcaagcagcaag 13457737
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 180 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 6209956 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 6209898 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 6209897 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 6209838 Query: 241 gaaatcc 247 ||||||| Sbjct: 6209837 gaaatcc 6209831 Score = 155 bits (78), Expect = 1e-34 Identities = 115/126 (91%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaa 182 |||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 6492452 gctctttgaacttttcaaacttagcgaactggaacatatgaggtgctaaaggaaggaaaa 6492511 Query: 183 tcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaaga 242 |||||||||| ||||| |||| |||||||||||| ||||| |||||||||||||||||| Sbjct: 6492512 tcaaccgaga-cccgtcagtaacggcgagcgagaacggaatgagggttttcatcaaaaga 6492570 Query: 243 aatccg 248 |||||| Sbjct: 6492571 aatccg 6492576 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 233 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13412084 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 13412025 Query: 293 cagcaagcagcaag 306 |||||||||||||| Sbjct: 13412024 cagcaagcagcaag 13412011
>emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131531 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 180 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 107063 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 107005 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 107004 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 106945 Query: 241 gaaatcc 247 ||||||| Sbjct: 106944 gaaatcc 106938
>emb|AL831805.4|CNS08CAI Oryza sativa chromosome 12, . BAC OSJNBa0085J02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 166508 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Plus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 180 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 129191 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 129249 Query: 181 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 240 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 129250 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 129309 Query: 241 gaaatcc 247 ||||||| Sbjct: 129310 gaaatcc 129316
>gb|DQ008840.1| Cycas revoluta large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2745 Score = 186 bits (94), Expect = 4e-44 Identities = 133/146 (91%) Strand = Plus / Plus Query: 76 tggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactt 135 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 1 tggatctccgatcgggaaaccgtatccaagctccgtggctagtccgcgctccttggactc 60 Query: 136 ttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccc 195 | ||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||| Sbjct: 61 tcaggacttagcgaaccgaaacatctaagtagctagaggaaggggaatcaaccgagaccc 120 Query: 196 cgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||| |||||| Sbjct: 121 cgttagtagcggcgagcgaaagcgga 146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 256 ttcattcgatttgttgt-ggattggatgatggaaaaacca 294 |||||||||||||||| |||||||||||||||||||||| Sbjct: 225 ttcattcgatttgttggcggattggatgatggaaaaacca 264
>gb|DQ008839.1| Zamia integrifolia large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2779 Score = 180 bits (91), Expect = 3e-42 Identities = 178/205 (86%), Gaps = 9/205 (4%) Strand = Plus / Plus Query: 17 gagaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccat 76 |||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||| Sbjct: 1 gagaaggatggacgctctcaaaggcgaaaggccatggggagataccg-tctgtgatccat 59 Query: 77 ggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttt 136 ||||||||||||||||||||||||||||||| |||||| ||||| ||||||| | Sbjct: 60 ggatctccgatcgggaaaccgtatccaagct----ggctag----cgctccttggactct 111 Query: 137 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 196 ||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 112 caggacttagcgaaccgaaacatctaagtagctagaggaaggggaatcaaccgagacccc 171 Query: 197 gttagtagcggcgagcgagagcgga 221 |||||||||||||||||| |||||| Sbjct: 172 gttagtagcggcgagcgaaagcgga 196 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 269 ttgtggattggatgatggaaaaacca 294 ||||| |||||||||||||||||||| Sbjct: 290 ttgtgaattggatgatggaaaaacca 315
>gb|DQ008830.1| Brasenia schreberi large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3136 Score = 176 bits (89), Expect = 4e-41 Identities = 107/112 (95%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 112 ggctagtctgcgctctttggacttttc--aaacttagcgaactgaaacatctgagtagct 169 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1 ggctagtctgcgctctttggactttgagaaaacttagcgaactgaaacatctgagtagct 60 Query: 170 aaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 112 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gattggatgatggaaaaacc 293 |||||||||||||||||||| Sbjct: 350 gattggatgatggaaaaacc 369
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 221 aacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattgga 280 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31048153 aacaagagttttcatcaaaagaaatccgaagcagtttcattcgatttgttgtggattgga 31048212 Query: 281 tgatggaaaaaccagcaagcagcaagcgtag 311 ||||||||||||||||||||||||||||||| Sbjct: 31048213 tgatggaaaaaccagcaagcagcaagcgtag 31048243 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 atccatggatctccgatcgggaaaccgta 99 |||||||||||||||||| ||||| |||| Sbjct: 542381 atccatggatctccgatcaggaaagcgta 542409
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Minus Query: 221 aacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattgga 280 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 47911 aacaagagttttcatcaaaagaaatccgaagcagtttcattcgatttgttgtggattgga 47852 Query: 281 tgatggaaaaaccagcaagcagcaagcgtag 311 ||||||||||||||||||||||||||||||| Sbjct: 47851 tgatggaaaaaccagcaagcagcaagcgtag 47821
>gb|DQ008799.1| Asarum canadense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3403 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Plus Query: 127 tttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaa 186 |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 59 tttggactttgaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaa 118 Query: 187 ccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||||||||||||||||||||||||| Sbjct: 119 ccgagaccccgttagtagcggcgagcgagagcgga 153 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 303 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 281 Score = 54.0 bits (27), Expect = 4e-04 Identities = 37/39 (94%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 79 atctccgatcgggaaaccgtatccaagctccgtggctag 117 ||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1 atctccgatcgggaacccg-atccaagctccgtggctag 38
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 221 aacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattgga 280 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31138676 aacaagagttttcatcaaaagaaatccgaagcagtttcattcgatttgttgtggattgga 31138735 Query: 281 tgatggaaaaaccagcaagcagcaagcgtag 311 ||||||||||||||||||||||||||||||| Sbjct: 31138736 tgatggaaaaaccagcaagcagcaagcgtag 31138766 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 atccatggatctccgatcgggaaaccgta 99 |||||||||||||||||| ||||| |||| Sbjct: 542379 atccatggatctccgatcaggaaagcgta 542407
>gb|DQ008824.1| Schisandra sphenanthera large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3658 Score = 163 bits (82), Expect = 6e-37 Identities = 85/86 (98%) Strand = Plus / Plus Query: 136 ttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccc 195 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 ttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccc 60 Query: 196 cgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||| Sbjct: 61 cgttagtagcggcgagcgagagcgga 86 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 ggtttcattcgatttgttgtggattggatgatggaaaaacc 614
>emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa0096K13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138508 Score = 155 bits (78), Expect = 1e-34 Identities = 115/126 (91%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 123 gctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaa 182 |||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 45717 gctctttgaacttttcaaacttagcgaactggaacatatgaggtgctaaaggaaggaaaa 45776 Query: 183 tcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaaga 242 |||||||||| ||||| |||| |||||||||||| ||||| |||||||||||||||||| Sbjct: 45777 tcaaccgaga-cccgtcagtaacggcgagcgagaacggaatgagggttttcatcaaaaga 45835 Query: 243 aatccg 248 |||||| Sbjct: 45836 aatccg 45841
>gb|DQ008797.1| Thottea tomentosa large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2949 Score = 151 bits (76), Expect = 2e-33 Identities = 79/80 (98%) Strand = Plus / Plus Query: 142 cttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttag 201 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 cttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttag 60 Query: 202 tagcggcgagcgagagcgga 221 |||||||||||||||||||| Sbjct: 61 tagcggcgagcgagagcgga 80 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 ggtttcattctttttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 263
>gb|DQ008762.1| Sargentodoxa cuneata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2843 Score = 147 bits (74), Expect = 4e-32 Identities = 80/82 (97%) Strand = Plus / Plus Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 aacttagcgaaccgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 60 Query: 200 agtagcggcgagcgagagcgga 221 |||||||||||||||||||||| Sbjct: 61 agtagcggcgagcgagagcgga 82 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 236
>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154442 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Plus Query: 233 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127429 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 127488 Query: 293 cagcaagcagcaag 306 |||||||||||||| Sbjct: 127489 cagcaagcagcaag 127502
>gb|DQ008791.1| Anemopsis californica large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3326 Score = 141 bits (71), Expect = 2e-30 Identities = 74/75 (98%) Strand = Plus / Plus Query: 147 cgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcg 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 cgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcg 60 Query: 207 gcgagcgagagcgga 221 ||||||||||||||| Sbjct: 61 gcgagcgagagcgga 75 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 192
>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome Length = 105340 Score = 139 bits (70), Expect = 9e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 128 ttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaac 187 |||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||| Sbjct: 34726 ttggacttttaaaacttagcgaactgaaacatctaagtagctaaaggaaaggaaatcaac 34785 Query: 188 cgagaccccgttagtagcggcgagcgagagcgga 221 |||||| |||||||||||||||||||| |||||| Sbjct: 34786 cgagactccgttagtagcggcgagcgaaagcgga 34819 Score = 119 bits (60), Expect = 8e-24 Identities = 88/96 (91%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 11 ggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtg 70 |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| Sbjct: 34600 ggcattgagaaggaaggacgctttcaagggcgaaacgccatggggagataccg-tctgtg 34658 Query: 71 atccatggatctccgatcgggaaaccgtatccaagc 106 |||||||||||||| ||||||||||||||||||||| Sbjct: 34659 atccatggatctccaatcgggaaaccgtatccaagc 34694
>gb|DQ008818.1| Acorus gramineus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2523 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 134 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagac 193 ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 92 ttttctaacttagcgaactgaaacatctaagtagctaaaggaagggaaatcaaccgagac 151 Query: 194 cccgttagtagcggcgagcgagagcgga 221 |||| |||||||||||||||||||||| Sbjct: 152 tccgtgagtagcggcgagcgagagcgga 179 Score = 91.7 bits (46), Expect = 2e-15 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 20 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 79 ||||| ||||||||||| ||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1 aaggatggacgctttcataggcgaaaggccatgggtagatctcg-tctgtgatccatgga 59 Query: 80 tctccgatcgggaaaccgtatc 101 ||||| |||||||||||||||| Sbjct: 60 tctcctatcgggaaaccgtatc 81
>gb|DQ008817.1| Acorus calamus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2485 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 134 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagac 193 ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 78 ttttctaacttagcgaactgaaacatctaagtagctaaaggaagggaaatcaaccgagac 137 Query: 194 cccgttagtagcggcgagcgagagcgga 221 |||| |||||||||||||||||||||| Sbjct: 138 tccgtgagtagcggcgagcgagagcgga 165 Score = 71.9 bits (36), Expect = 2e-09 Identities = 58/64 (90%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 38 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 97 ||||||||||||||||| |||| | |||||||||||||||||||| |||||||||||| Sbjct: 5 aggcgaaaggccatgggtagatctcg-tctgtgatccatggatctcctatcgggaaaccg 63 Query: 98 tatc 101 |||| Sbjct: 64 tatc 67
>gb|DQ008779.1| Siparuna decipiens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2316 Score = 127 bits (64), Expect = 3e-26 Identities = 67/68 (98%) Strand = Plus / Plus Query: 154 aaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcg 213 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 aaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcg 60 Query: 214 agagcgga 221 |||||||| Sbjct: 61 agagcgga 68 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 192
>gb|M68929.1|MPOMTCG Marchantia polymorpha mitochondrion, complete genome Length = 186609 Score = 121 bits (61), Expect = 2e-24 Identities = 95/105 (90%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggagatat 61 ||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 150346 ggatgcctaggcattgagaaggatggacgctttcaaaggcgaaacgccatggggagatat 150287 Query: 62 gaatctgtgatccatggatctccgatcgggaaaccgtatccaagc 106 |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 150286 -cgtctgtgatccatgggtctccaatcgggaaaccgtatccaagc 150243 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 |||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| Sbjct: 150198 aacttagcgaactgaaacatctaagtagctaaaggaaaggaaatcaaccgagactccgtt 150139 Query: 200 agtagcggcgagcga 214 ||||||||||||||| Sbjct: 150138 agtagcggcgagcga 150124 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 256 ttcattcgatttgttgtggattggatgatggaaaaacca 294 |||||||||||||||| | |||| ||||||||||||||| Sbjct: 150105 ttcattcgatttgttgagaattgaatgatggaaaaacca 150067
>gb|DQ008793.1| Houttuynia cordata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3212 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 134
>gb|DQ008782.1| Idiospermum australiense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3325 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 157 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 180 aaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaatcaaccgagaccccgttagtagcggcgagcgagagcgga 42
>gb|DQ008780.1| Calycanthus floridus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3357 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 105
>gb|DQ008776.1| Daphnandra micrantha large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2644 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 129
>gb|DQ008768.1| Peumus boldus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 1491 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 127
>gb|AC146940.19| Medicago truncatula clone mth2-132l6, complete sequence Length = 125567 Score = 105 bits (53), Expect = 1e-19 Identities = 53/53 (100%) Strand = Plus / Minus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 54 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25120 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 25068
>gb|AC138017.15| Medicago truncatula clone mth2-6i3, complete sequence Length = 129585 Score = 105 bits (53), Expect = 1e-19 Identities = 53/53 (100%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 54 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100395 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 100447
>gb|DQ008833.1| Gnetum gnemon large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 4055 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||| Sbjct: 1 agcgaactgaaacatctaagtagctagaggaacggcaatcaaccgagaccccgttagtag 60 Query: 205 cggcgagcgagagcgga 221 |||||||||| |||||| Sbjct: 61 cggcgagcgaaagcgga 77
>gb|DQ008767.1| Ceratophyllum submersum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3375 Score = 103 bits (52), Expect = 5e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 166 agctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 221 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 56 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 273 ggattggatgatggaaaaaccagcaagcagcaag 306 ||||||||||||||||||||| |||||||||||| Sbjct: 300 ggattggatgatggaaaaacctgcaagcagcaag 333
>gb|AY267353.1| Chara vulgaris mitochondrion, complete genome Length = 67737 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 141 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 200 ||||||||||||||||||||| |||||||||||||| | | |||||||||||| |||||| Sbjct: 305 acttagcgaactgaaacatctaagtagctaaaggaaagcacatcaaccgagactccgtta 364 Query: 201 gtagcggcgagcga 214 |||| ||||||||| Sbjct: 365 gtagtggcgagcga 378 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 69 tgatccatggatctccgatcgggaaaccg 97 |||||||||||| ||| |||||||||||| Sbjct: 265 tgatccatggatttcctatcgggaaaccg 293
>gb|AF494279.1| Chaetosphaeridium globosum mitochondrial DNA, complete genome Length = 56574 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 141 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 200 ||||||||||||||||||||| |||||||||||||| | ||||||| |||||| |||||| Sbjct: 1029 acttagcgaactgaaacatctaagtagctaaaggaaaggaaatcaaacgagactccgtta 1088 Query: 201 gtagcggcgagcga 214 |||| ||||||||| Sbjct: 1089 gtagtggcgagcga 1102
>gb|DQ008837.1| Podocarpus macrophyllus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3014 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||| Sbjct: 1 gaactgaaacatctaagtagctagaggaaagggaatcaaccgagaccccgttagtagcgg 60 Query: 208 cgagcgagagcgga 221 ||||||| |||||| Sbjct: 61 cgagcgaaagcgga 74
>gb|AF110138.1|AF110138 Nephroselmis olivacea mitochondrion, complete genome Length = 45223 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 199 ||||| |||||||||||||||| |||||| ||||||| | |||||||||||||| ||||| Sbjct: 184 aactttgcgaactgaaacatctaagtagcaaaaggaaaggaaatcaaccgagactccgtt 243 Query: 200 agtagcggcgagcgagagcgga 221 ||||| ||||||||| |||||| Sbjct: 244 agtagtggcgagcgaaagcgga 265
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 97.6 bits (49), Expect = 3e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 110 gtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 162 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 48502 gtggctagtctgcgctctttggacttttcaaacttagcgaactaaaacatctg 48554
>gb|DQ008795.1| Piper betle large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3159 Score = 93.7 bits (47), Expect = 5e-16 Identities = 54/55 (98%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 254 gtttcattcgattt-gttgtggattggatgatggaaaaaccagcaagcagcaagc 307 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 245 gtttcattcgattttgttgtggattggatgatggaaaaaccagcaagcagcaagc 299
>gb|DQ008771.1| Hernandia ovigera large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2503 Score = 93.7 bits (47), Expect = 5e-16 Identities = 54/55 (98%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28 ggtttcattcgatttgttgtggattggatgatgg-aaaaccagcaagcagcaagc 81
>gb|DQ008834.1| Welwitschia mirabilis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3363 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 ||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||| Sbjct: 1 gcgaactgaaacatcgttgtagctagaggaagggcaatcaaccgagaccccgtgagtagc 60 Query: 206 ggcgagcgagagcggaa 222 ||||||||| ||||||| Sbjct: 61 ggcgagcgaaagcggaa 77
>gb|DQ008821.1| Ascarina rubricaulis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 1631 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 301 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 58 ggtttcattcgatttcttgtggattggatgatggaaaaaccagcaagca 106
>gb|DQ008822.1| Hedyosmum arborescens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2891 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 307 |||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 27 ggtttcattctatttcttgtggattggatgatggaaaaaccagcaagctgcaagc 81
>gb|DQ008832.1| Amborella trichopoda large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3368 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ggtttcattcgatttgttgtggattggatgatggaaaaacc 323
>gb|DQ008826.1| Trimenia moorei large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3041 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggtttcattcgatttgttgtggattggatgatggaaaaacc 756 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 gttagtagcggcgagcgagagcgga 221 |||| |||||||||||||||||||| Sbjct: 1 gttattagcggcgagcgagagcgga 25
>gb|DQ008825.1| Illicium floridanum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3025 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 ggtttcattcgatttgttgtggattggatgatggaaaaacc 306
>gb|DQ008823.1| Kadsura japonica large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3585 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaaaacc 293 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 ggtttcattcgatttgttgtggattggatgatggaaaaacc 544
>gb|AF497445.1| Gossypium hirsutum clone D1A01 unknown chloroplast sequence Length = 477 Score = 79.8 bits (40), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 2 ggatgcccgggcattgagaaggaaggacgctttcagaggcgaaagg 47 ||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 410 ggatgcccgggcattganaaggaaggacgctntcagaggcgaaagg 455
>gb|AF295546.1| Malawimonas jakobiformis mitochondrial DNA, complete genome Length = 47328 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 139 aaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 |||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 25790 aaacttagtgaactgaaacatctaagtagctaaaggaataaaaatcaaccgaga 25737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 139 aaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 |||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 221 aaacttagtgaactgaaacatctaagtagctaaaggaataaaaatcaaccgaga 274
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 3809743 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 3809684 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 3809683 ggcgagcga 3809675 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 2734695 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 2734636 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 2734635 ggcgagcga 2734627 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 913826 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 913885 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 913886 ggcgagcga 913894 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 194959 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 195018 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 195019 ggcgagcga 195027
>emb|X87290.1|RR23S170S R.rubrum 23S rRNA gene Length = 2759 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 191 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 250 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 251 ggcgagcga 259
>gb|DQ313043.1| Uncultured bacterium clone 3P9C 23S ribosomal RNA gene, partial sequence Length = 732 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 22 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 81 Query: 208 cgagcga 214 ||||||| Sbjct: 82 cgagcga 88
>gb|DQ312907.1| Uncultured bacterium clone 3L5F 23S ribosomal RNA gene, partial sequence Length = 317 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 71 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 130 Query: 208 cgagcga 214 ||||||| Sbjct: 131 cgagcga 137
>gb|DQ312820.1| Uncultured bacterium clone 3I2E 23S ribosomal RNA gene, partial sequence Length = 406 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||||| ||||| | | |||||||||||| ||||||||||||| Sbjct: 159 gaactgaaacatctaagtagccggaggaaaggacatcaaccgagactccgttagtagcgg 218 Query: 208 cgagcga 214 ||||||| Sbjct: 219 cgagcga 225
>gb|DQ312816.1| Uncultured bacterium clone 3I1B 23S ribosomal RNA gene, partial sequence Length = 317 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 71 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 130 Query: 208 cgagcga 214 ||||||| Sbjct: 131 cgagcga 137
>gb|DQ312540.1| Uncultured bacterium clone 3A7F 23S ribosomal RNA gene, partial sequence Length = 305 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 70 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 129 Query: 208 cgagcga 214 ||||||| Sbjct: 130 cgagcga 136
>gb|AY309486.1| Unknown marine alpha proteobacterium JP66.1 23S ribosomal RNA gene, partial sequence Length = 2536 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | | ||||| | | |||||||||||| ||||||||||||| Sbjct: 199 gaactgaaacatctaagtacccataggaaaggacatcaaccgagactccgttagtagcgg 258 Query: 208 cgagcga 214 ||||||| Sbjct: 259 cgagcga 265
>emb|AJ879829.1| Uncultured organism 23S rRNA gene, clone LP4-147 Length = 446 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | |||||||||||||| |||| |||||||| Sbjct: 117 gaactgaaacatctcagtacctgcaggaaaggaaatcaaccgagactccgtcagtagcgg 176 Query: 208 cgagcga 214 ||||||| Sbjct: 177 cgagcga 183
>gb|AY033325.1| Uncultured alpha proteobacteria MB13F01 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3663 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 144 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 203 |||||||||||||||||| |||| ||| ||||| | | ||||||||| || |||| |||| Sbjct: 2065 tagcgaactgaaacatctaagtaactagaggaaaggatatcaaccgatactccgtaagta 2124 Query: 204 gcggcgagcgagagcgga 221 | ||||||||| |||||| Sbjct: 2125 gtggcgagcgaaagcgga 2142
>gb|AF410947.1| Bartonella weissi 23S ribosomal RNA gene, partial sequence Length = 2449 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||||| | ||||| |||||| |||||||||| || Sbjct: 114 gaactgaaacatctaagtacctgtaggaagggacatcaaacgagactccgttagtagtgg 173 Query: 208 cgagcgagagcgga 221 ||||||| |||||| Sbjct: 174 cgagcgaaagcgga 187
>gb|AY458646.2| Uncultured bacterium 578 clone EBAC080-L31E09 genomic sequence Length = 78078 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||| ||| |||||||||||||| |||| ||| ||||| ||||||||||||| || Sbjct: 70791 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaaccgagattccc 70732 Query: 198 ttagtagcggcgagcga 214 ||||||||||||||||| Sbjct: 70731 ttagtagcggcgagcga 70715
>emb|AM085146.1| Magnetospirillum gryphiswaldense magnetosome island Length = 130000 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | | |||||||||||| |||||||||| Sbjct: 6662 gcgaactgaaacatctaagtagcccgaggaaaggacatcaaccgagactccgttagtagt 6721 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 6722 ggcgagcga 6730
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | | ||||| ||||||||||||| |||| |||||||| Sbjct: 167761 gaactgaaacatctaagtacccagaggaaaagaaatcaaccgagattccgtcagtagcgg 167820 Query: 208 cgagcgagagcggaaca 224 ||||||| ||||||||| Sbjct: 167821 cgagcgaaagcggaaca 167837
>gb|DQ313103.1| Uncultured bacterium clone 3S12H 23S ribosomal RNA gene, partial sequence Length = 824 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ313086.1| Uncultured bacterium clone 3R4A 23S ribosomal RNA gene, partial sequence Length = 689 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ313024.1| Uncultured bacterium clone 3P2A 23S ribosomal RNA gene, partial sequence Length = 777 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ312929.1| Uncultured bacterium clone 3M12D 23S ribosomal RNA gene, partial sequence Length = 717 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | | |||||||||||| |||||||||| Sbjct: 20 gcgaactgaaacatctaagtagccggaggaaaggacatcaaccgagactccgttagtagt 79 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 80 ggcgagcga 88
>gb|DQ312910.1| Uncultured bacterium clone 3L7B 23S ribosomal RNA gene, partial sequence Length = 768 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 11 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 70 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 71 tggcgagcgaaagcgga 87
>gb|DQ312904.1| Uncultured bacterium clone 3L2H 23S ribosomal RNA gene, partial sequence Length = 717 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ312815.1| Uncultured bacterium clone 3I12G 23S ribosomal RNA gene, partial sequence Length = 692 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 11 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 70 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 71 tggcgagcgaaagcgga 87
>gb|DQ312654.1| Uncultured bacterium clone 3D12E 23S ribosomal RNA gene, partial sequence Length = 282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 67 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 126 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 127 tggcgagcgaaagcgga 143
>gb|DQ312652.1| Uncultured bacterium clone 3D12A 23S ribosomal RNA gene, partial sequence Length = 777 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ312619.1| Uncultured bacterium clone 3C3B 23S ribosomal RNA gene, partial sequence Length = 693 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 21 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 80 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 81 tggcgagcgaaagcgga 97
>gb|DQ312617.1| Uncultured bacterium clone 3C2H 23S ribosomal RNA gene, partial sequence Length = 320 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 67 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 126 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 127 tggcgagcgaaagcgga 143
>gb|DQ312598.1| Uncultured bacterium clone 3B9C 23S ribosomal RNA gene, partial sequence Length = 608 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 21 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 80 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 81 tggcgagcgaaagcgga 97
>gb|DQ312581.1| Uncultured bacterium clone 3B5H 23S ribosomal RNA gene, partial sequence Length = 701 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 21 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 80 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 81 tggcgagcgaaagcgga 97
>gb|DQ312534.1| Uncultured bacterium clone 3A3H 23S ribosomal RNA gene, partial sequence Length = 307 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 68 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 127 Query: 205 cggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 128 tggcgagcgaaagcgga 144
>gb|DQ008827.1| Austrobaileya scandens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3968 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 253 ggtttcattcgatttgttgtggattggatgatggaaa 289 |||||||||||||||||||| |||||||||||||||| Sbjct: 550 ggtttcattcgatttgttgttgattggatgatggaaa 586
>gb|AY744396.1| Uncultured proteobacterium RedeBAC7D11 contig 0, complete sequence Length = 61985 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| ||||||||||||| | ||||||||||| Sbjct: 45396 gaactgaaacatctaagtaactgcaggaaaagaaatcaaccgagattctgttagtagcgg 45337 Query: 208 cgagcgagagcggaaca 224 ||||||| ||||||||| Sbjct: 45336 cgagcgaaagcggaaca 45320
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 1294582 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 1294523 Query: 208 cgagcga 214 ||||||| Sbjct: 1294522 cgagcga 1294516 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 1175868 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 1175809 Query: 208 cgagcga 214 ||||||| Sbjct: 1175808 cgagcga 1175802
>gb|DQ414689.1| Caedibacter caryophilus 23S ribosomal RNA gene, partial sequence Length = 2949 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| ||||||| ||||| | |||||||||||| |||||||||| || Sbjct: 2 gaactgaaacatctaagtagctcgaggaaaagacatcaaccgagactccgttagtagtgg 61 Query: 208 cgagcga 214 ||||||| Sbjct: 62 cgagcga 68
>gb|DQ313094.1| Uncultured bacterium clone 3R7H 23S ribosomal RNA gene, partial sequence Length = 829 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 23 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 82 Query: 208 cgagcga 214 ||||||| Sbjct: 83 cgagcga 89
>gb|DQ312828.1| Uncultured bacterium clone 3I7D 23S ribosomal RNA gene, partial sequence Length = 760 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 23 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 82 Query: 208 cgagcga 214 ||||||| Sbjct: 83 cgagcga 89
>gb|DQ312810.1| Uncultured bacterium clone 3I10A 23S ribosomal RNA gene, partial sequence Length = 313 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 69 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 128 Query: 208 cgagcga 214 ||||||| Sbjct: 129 cgagcga 135
>gb|DQ312651.1| Uncultured bacterium clone 3D11H 23S ribosomal RNA gene, partial sequence Length = 746 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 23 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 82 Query: 208 cgagcga 214 ||||||| Sbjct: 83 cgagcga 89
>gb|DQ312628.1| Uncultured bacterium clone 3C5E 23S ribosomal RNA gene, partial sequence Length = 279 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 68 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 127 Query: 208 cgagcga 214 ||||||| Sbjct: 128 cgagcga 134
>gb|AF208483.1|AF208483 Agrobacterium rubi 23S ribosomal RNA gene, partial sequence Length = 2373 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || |||||| | | |||||||||||| |||| ||||| || Sbjct: 153 gaactgaaacatctaagtacctgaaggaaaggacatcaaccgagactccgtaagtagtgg 212 Query: 208 cgagcga 214 ||||||| Sbjct: 213 cgagcga 219
>gb|U02970.1|PWU02970 Prototheca wickerhamii 263-11 complete mitochondrial DNA Length = 55328 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 152 tgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgag 211 |||||||||| |||| ||| ||||| |||||||||||||| |||||||||| || ||| Sbjct: 49048 tgaaacatcttagtaactagaggaatagaaatcaaccgagactccgttagtagtggtgag 49107 Query: 212 cgagagcggaa 222 ||| ||||||| Sbjct: 49108 cgaaagcggaa 49118
>gb|AY484593.1| Bartonella quintana 23S ribosomal RNA gene, partial sequence Length = 2450 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 116 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 175 Query: 208 cgagcga 214 ||||||| Sbjct: 176 cgagcga 182
>gb|L39095.1|BAORG23S Bartonella bacilliformis 23S ribosomal RNA (23S rRNA) gene Length = 2821 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 244 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 303 Query: 208 cgagcga 214 ||||||| Sbjct: 304 cgagcga 310
>emb|X68722.1|PWMLSURRN P.wickerhamii mitochondrial gene for large ribosomal RNA Length = 4059 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 152 tgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgag 211 |||||||||| |||| ||| ||||| |||||||||||||| |||||||||| || ||| Sbjct: 321 tgaaacatcttagtaactagaggaatagaaatcaaccgagactccgttagtagtggtgag 380 Query: 212 cgagagcggaa 222 ||| ||||||| Sbjct: 381 cgaaagcggaa 391
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 139 aaacttagcgaactgaaacatctgagtagctaaaggaag 177 |||||||| |||||||||||||| ||||||||||||||| Sbjct: 2175 aaacttagtgaactgaaacatcttagtagctaaaggaag 2213
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 256409 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 256468 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 256469 tgacgagcga 256478
>gb|AE008594.1| Rickettsia conorii str. Malish 7, section 26 of 114 of the complete genome Length = 10545 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 980 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1039 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1040 tgacgagcga 1049
>gb|AY033298.1| Uncultured alpha proteobacterium MB11B03 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3604 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 2000 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 2059 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 2060 tgacgagcga 2069
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 341867 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 341926 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 341927 tgacgagcga 341936
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 418394 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 418453 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 418454 tgacgagcga 418463
>emb|Z49077.2|RPFMTGN Rickettsia prowazekii fmt gene for L-methionyl-tRNA-fMet N-formyltransferase and 23S rRNA gene Length = 4466 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1784 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1843 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1844 tgacgagcga 1853
>emb|Y13122.2|RCY13122 Rickettsia conorii fmt gene (partial) and 23S rRNA gene Length = 3935 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1260 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1319 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1320 tgacgagcga 1329
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 1581640 gaactgaaacatctaagtacctgtaggaaaggacatcaaacgagactccgttagtagtgg 1581581 Query: 208 cgagcgagagcgga 221 ||||||| |||||| Sbjct: 1581580 cgagcgaaagcgga 1581567 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 1411631 gaactgaaacatctaagtacctgtaggaaaggacatcaaacgagactccgttagtagtgg 1411572 Query: 208 cgagcgagagcgga 221 ||||||| |||||| Sbjct: 1411571 cgagcgaaagcgga 1411558
>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4 Length = 282610 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 258036 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 258095 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 258096 tgacgagcga 258105
>gb|DQ312977.1| Uncultured bacterium clone 3N7C 23S ribosomal RNA gene, partial sequence Length = 751 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 6 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 65 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 66 tgacgagcga 75
>gb|DQ312785.1| Uncultured bacterium clone 3H2F 23S ribosomal RNA gene, partial sequence Length = 788 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 6 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 65 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 66 tgacgagcga 75
>gb|DQ312614.1| Uncultured bacterium clone 3C2C 23S ribosomal RNA gene, partial sequence Length = 309 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 53 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 112 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 113 tgacgagcga 122
>gb|AF410943.1| Bartonella henselae 23S ribosomal RNA gene, partial sequence Length = 2448 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 113 gaactgaaacatctaagtacctgtaggaaaggacatcaaacgagactccgttagtagtgg 172 Query: 208 cgagcgagagcgga 221 ||||||| |||||| Sbjct: 173 cgagcgaaagcgga 186
>emb|AJ133712.1|RCA133712 Rickettsia canada 23S rRNA gene, partial Length = 2719 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 141 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 200 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 201 tgacgagcga 210
>emb|AJ133711.1|RAU133711 Rickettsia australis 23S rRNA gene, partial Length = 2718 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 141 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 200 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 201 tgacgagcga 210
>emb|Y13133.2|RTY13133 Rickettsia typhi fmt gene (partial) and 23S rRNA gene Length = 3816 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1138 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1197 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1198 tgacgagcga 1207
>emb|Y13129.2|RAY13129 Rickettsia akari fmt gene (partial) and 23S rRNA gene Length = 3939 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1263 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1322 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1323 tgacgagcga 1332
>emb|Y13128.2|RRY13128 Rickettsia rhipicephali fmt gene (partial) and 23S rRNA gene Length = 3927 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1252 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1311 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1312 tgacgagcga 1321
>emb|Y13127.2|RMY13127 Rickettsia montana fmt gene (partial) and 23S rRNA gene Length = 3929 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1252 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1311 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1312 tgacgagcga 1321
>emb|Y13125.2|RRY13125 Rickettsia rickettsii fmt gene (partial) and 23S rRNA gene Length = 3968 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1293 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1352 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1353 tgacgagcga 1362
>emb|Y13124.2|RSY13124 Rickettsia sibirica fmt gene (partial) and 23S rRNA gene Length = 3938 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1261 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1320 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1321 tgacgagcga 1330
>emb|Y13123.2|RPY13123 Rickettsia parkeri fmt gene (partial) and 23S rRNA gene Length = 3939 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1264 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1323 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 1324 tgacgagcga 1333
>gb|U11022.1|RRU11022 Rickettsia rickettsii 23S rRNA and 5S rRNA genes, partial sequence, and 23S-5S internal transcribed spacer Length = 3069 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 122 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 181 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 182 tgacgagcga 191
>gb|U11018.1|RPU11018 Rickettsia prowazekii 23S rRNA and 5S rRNA genes, partial sequence, and 23S-5S internal transcribed spacer Length = 3056 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 122 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 181 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 182 tgacgagcga 191
>gb|U11015.1|RBU11015 Rickettsia bellii 23S rRNA and 5S rRNA genes, partial sequence, and 23S-5S internal transcribed spacer Length = 3092 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 122 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 181 Query: 205 cggcgagcga 214 | ||||||| Sbjct: 182 tgacgagcga 191
>gb|AF279106.2| Uncultured marine gamma proteobacterium EBAC31A08 BAC sequence Length = 128758 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||| ||| |||||||||||||| |||| ||| ||||| |||||||| |||| ||| Sbjct: 99620 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaacagagattccg 99679 Query: 198 ttagtagcggcgagcga 214 |||||||||||||||| Sbjct: 99680 gtagtagcggcgagcga 99696
>gb|AY458644.1| Uncultured bacterium 562 clone EBAC000-45B06 genomic sequence Length = 61185 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||| ||| |||||||||||||| |||| ||| ||||| |||||||| |||| ||| Sbjct: 81 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaacagagattccg 140 Query: 198 ttagtagcggcgagcga 214 |||||||||||||||| Sbjct: 141 gtagtagcggcgagcga 157
>gb|AY372454.1| Uncultured marine gamma proteobacterium EB000-45B06 fosmid clone Length = 61173 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||| ||| |||||||||||||| |||| ||| ||||| |||||||| |||| ||| Sbjct: 81 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaacagagattccg 140 Query: 198 ttagtagcggcgagcga 214 |||||||||||||||| Sbjct: 141 gtagtagcggcgagcga 157
>gb|AY596241.1| Helicobacter aurati strain ATCC BBA-1 23S ribosomal RNA gene, partial sequence Length = 2711 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||| ||||||| |||||||||| |||||||| ||||| ||||||| ||||| | Sbjct: 120 caaacctagcgaagtgaaacatctcagtagctagaggaaaagaaatcaaacgagattctc 179 Query: 198 ttagtagcggcgagcga 214 ||||||||||||||||| Sbjct: 180 ttagtagcggcgagcga 196
>gb|AF437291.1| Saccharomyces castellii strain NRRL Y-12630 mitochondrion, complete genome Length = 25753 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 ||||||| |||||||||||||| |||| ||||||||| ||||||||||||| Sbjct: 20544 aacttagtgaactgaaacatctaagtaactaaaggaatataaatcaaccgaga 20596
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | | |||||||||||| ||| |||||| Sbjct: 1829342 gcgaactgaaacatctaagtagcccgaggaaaggacatcaaccgagactccgctagtagt 1829401 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 1829402 ggcgagcga 1829410 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | | |||||||||||| ||| |||||| Sbjct: 967116 gcgaactgaaacatctaagtagcccgaggaaaggacatcaaccgagactccgctagtagt 967175 Query: 206 ggcgagcga 214 ||||||||| Sbjct: 967176 ggcgagcga 967184
>gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2558 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 140 aacttagcgaactgaaacatctgagtagctaaaggaa 176 ||||||| |||||||||||||| |||||||||||||| Sbjct: 148 aacttagtgaactgaaacatcttagtagctaaaggaa 184
>gb|AF208509.1|AF208509 Bradyrhizobium japonicum strain USDA 129 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 2759 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||| ||| |||||||||||||| |||| || ||||| | | |||||| ||||| ||| Sbjct: 2574 caaacctagggaactgaaacatctaagtacctggaggaaaggacatcaacagagactccg 2633 Query: 198 ttagtagcggcgagcga 214 ||||||| ||||||||| Sbjct: 2634 ttagtagtggcgagcga 2650
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||||| | ||||||||| |||| |||||| ||||||| ||||||||||||| | | Sbjct: 182596 caaacttggtgaactgaaatatctaagtagccaaaggaaaagaaatcaaccgagattctg 182655 Query: 198 ttagtagcggcgagcgagagcggaa 222 ||||||| | ||||||| ||||||| Sbjct: 182656 ttagtagtgacgagcgaaagcggaa 182680
>gb|DQ313053.1| Uncultured bacterium clone 3Q12G 23S ribosomal RNA gene, partial sequence Length = 332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 69 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 128 Query: 205 cggcgagcgagagcggaaca 224 ||||||||| | ||||||| Sbjct: 129 tggcgagcgaaaccggaaca 148
>gb|DQ312872.1| Uncultured bacterium clone 3K12G 23S ribosomal RNA gene, partial sequence Length = 722 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 22 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 81 Query: 205 cggcgagcgagagcggaaca 224 ||||||||| | ||||||| Sbjct: 82 tggcgagcgaaaccggaaca 101
>gb|DQ312842.1| Uncultured bacterium clone 3J12G 23S ribosomal RNA gene, partial sequence Length = 332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 69 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 128 Query: 205 cggcgagcgagagcggaaca 224 ||||||||| | ||||||| Sbjct: 129 tggcgagcgaaaccggaaca 148
>gb|DQ312687.1| Uncultured bacterium clone 3E11G 23S ribosomal RNA gene, partial sequence Length = 307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 205 |||||||||||||||| |||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 68 gcgaactgaaacatctaagtagccggaggaaaggatatcaaccgatactccgtaagtagt 127 Query: 206 ggcgagcgagagcgga 221 ||||||||| |||||| Sbjct: 128 ggcgagcgaaagcgga 143
>gb|DQ312635.1| Uncultured bacterium clone 3C7A 23S ribosomal RNA gene, partial sequence Length = 331 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 145 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 204 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 67 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 126 Query: 205 cggcgagcgagagcggaaca 224 ||||||||| | ||||||| Sbjct: 127 tggcgagcgaaaccggaaca 146
>gb|AY826693.1| Bradyrhizobium sp. EAA4.8 23S ribosomal RNA gene, partial sequence Length = 468 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 216 gaactgaaacatctaagtacctggaggaaaggacatcaatcgagactccgttagtagtgg 275 Query: 208 cgagcga 214 ||||||| Sbjct: 276 cgagcga 282
>gb|AY826692.1| Bradyrhizobium sp. EDC3.5 23S ribosomal RNA gene, partial sequence Length = 468 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 216 gaactgaaacatctaagtacctggaggaaaggacatcaatcgagactccgttagtagtgg 275 Query: 208 cgagcga 214 ||||||| Sbjct: 276 cgagcga 282
>gb|AY826691.1| Bradyrhizobium sp. ERFr4.13TC1 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 208 cgagcga 214 ||||||| Sbjct: 303 cgagcga 309
>gb|AY826690.1| Bradyrhizobium sp. EDC3.6 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 208 cgagcga 214 ||||||| Sbjct: 303 cgagcga 309
>gb|AY826689.1| Bradyrhizobium sp. ERFr1.7CK2 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 208 cgagcga 214 ||||||| Sbjct: 303 cgagcga 309
>gb|AY826688.1| Bradyrhizobium sp. EDC2.8 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 208 cgagcga 214 ||||||| Sbjct: 303 cgagcga 309
>gb|AE009348.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 118 of 187 of the complete sequence Length = 10029 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 3610 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 3669 Query: 208 cgagcga 214 ||||||| Sbjct: 3670 cgagcga 3676
>gb|AE009325.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 95 of 187 of the complete sequence Length = 11704 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 1324 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 1383 Query: 208 cgagcga 214 ||||||| Sbjct: 1384 cgagcga 1390
>gb|AE009200.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 226 of 256 of the complete sequence Length = 10654 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 10540 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 10481 Query: 208 cgagcga 214 ||||||| Sbjct: 10480 cgagcga 10474
>gb|AE008980.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 6 of 256 of the complete sequence Length = 10029 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 3382 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 3441 Query: 208 cgagcga 214 ||||||| Sbjct: 3442 cgagcga 3448
>gb|AE008290.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 94 of 187 of the complete sequence Length = 13627 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 2336 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 2277 Query: 208 cgagcga 214 ||||||| Sbjct: 2276 cgagcga 2270
>gb|AE008265.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 69 of 187 of the complete sequence Length = 11527 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 8507 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 8448 Query: 208 cgagcga 214 ||||||| Sbjct: 8447 cgagcga 8441
>gb|AY033311.1| Uncultured gamma proteobacterium MB11G09 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 3597 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 197 ||||| ||| |||||||||||||| |||| ||| ||||| ||||||| |||| ||| Sbjct: 1874 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaattgagattccg 1933 Query: 198 ttagtagcggcgagcgagagcggaaca 224 |||||||||||||||| | ||||||| Sbjct: 1934 gtagtagcggcgagcgaaaccggaaca 1960
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 caaacttagcgaactgaaacatctgagtagctaaaggaa 176 ||||| |||||||||||||||||| |||||||| ||||| Sbjct: 45901 caaacctagcgaactgaaacatcttagtagctagaggaa 45863
>gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 genomic sequence Length = 43887 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 148 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 207 |||||||||||||| |||| | ||||||| ||||||||||||| | | ||||||||| Sbjct: 24311 gaactgaaacatctcagtacccaaaggaatagaaatcaaccgagattctgctagtagcgg 24252 Query: 208 cgagcga 214 ||||||| Sbjct: 24251 cgagcga 24245
>emb|X65487.1|PS23SRRN P.shigelloides gene for 23S rRNA Length = 2761 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 180 aaatcaaccgagaccccgttagtagcggcgagcga 214 ||||||||||||| |||||||||||||||||||| Sbjct: 220 aaatcaaccgagattccgttagtagcggcgagcga 254
>gb|DQ150561.1| Herbaspirillum huttiense strain 266 23S ribosomal RNA gene, partial sequence Length = 2426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 11 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 57
>gb|DQ150560.1| Herbaspirillum putei strain 7-2 23S ribosomal RNA gene, partial sequence Length = 2398 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 20 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 66
>gb|DQ150559.1| Herbaspirillum rubrisubalbicans strain LMG2286 23S ribosomal RNA gene, partial sequence Length = 2436 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 21 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 67
>gb|DQ150558.1| Herbaspirillum frisingense strain GSF30 23S ribosomal RNA gene, partial sequence Length = 2436 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 21 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 67
>gb|DQ150556.1| Herbaspirillum seropedicae strain Z67 23S ribosomal RNA gene, partial sequence Length = 2480 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 146 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 192 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 44 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 90
>gb|AY596265.1| Helicobacter mastomyrinus strain MIT 97-5577 23S ribosomal RNA gene, partial sequence Length = 2713 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 144 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 203 ||||||| |||||||||| |||||||| ||||| |||||||| |||| | |||||| Sbjct: 127 tagcgaagtgaaacatctcagtagctagaggaaaagaaatcaacagagattctcttagta 186 Query: 204 gcggcgagcga 214 ||||||||||| Sbjct: 187 gcggcgagcga 197
>gb|AY596263.1| Helicobacter sp. MIT 99-5504 23S ribosomal RNA gene, partial sequence Length = 2714 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 144 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 203 ||||||| |||||||||| |||||||| ||||| ||||||| ||||| || ||||| Sbjct: 126 tagcgaagtgaaacatctcagtagctagaggaaaagaaatcaaacgagattcccctagta 185 Query: 204 gcggcgagcga 214 ||||||||||| Sbjct: 186 gcggcgagcga 196 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,737,552 Number of Sequences: 3902068 Number of extensions: 3737552 Number of successful extensions: 71731 Number of sequences better than 10.0: 937 Number of HSP's better than 10.0 without gapping: 905 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 68897 Number of HSP's gapped (non-prelim): 2796 length of query: 452 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 430 effective length of database: 17,147,199,772 effective search space: 7373295901960 effective search space used: 7373295901960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
