ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3i24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 198 bits (100), Expect = 2e-47 Identities = 194/224 (86%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 108 gctggtgtacgtgccggcgaacgagatgatgcggtcgctggaggcgctggagcagcggct 167 |||||||||||||||||||||||||| |||| |||||||| |||||||||||| | |||| Sbjct: 12905156 gctggtgtacgtgccggcgaacgagacgatggggtcgctgcaggcgctggagcggaggct 12905097 Query: 168 ggggtcgctgggctgggagccgctactacgagaaccgagacatcgtgcagctccaccggc 227 || | ||| || ||||||| ||||||||||| |||| | | | |||||||||||||| | Sbjct: 12905096 ggcggggctcgggtgggagc-gctactacgaggaccgcgccgtggtgcagctccaccgcc 12905038 Query: 228 gcgacggcggcgtcgacctcatcgccctcccgcgagactttgccaggttccggtccacac 287 |||||||||||| |||||||||| ||||||| || ||||| ||| | ||||| ||||| | Sbjct: 12905037 gcgacggcggcgccgacctcatctccctcccccgcgacttcgcccgcttccgctccaccc 12904978 Query: 288 acatgtacgacgtcgtcgtcaagaacaggcaccacttcaaggtc 331 ||||||||||||||||| |||||||| | |||||||||||||| Sbjct: 12904977 acatgtacgacgtcgtcctcaagaaccgcgaccacttcaaggtc 12904934 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 29544798 cggcggcgccggcgccgagc 29544817 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 22 gtgtgggtgttccggaaggacggggtgatggagctg 57 |||||||||||| || ||||||||||||| ||||| Sbjct: 12905234 gtgtgggtgttcaagagggacggggtgatgcagctg 12905199
>gb|AF545810.1| Oryza sativa (japonica cultivar-group) shoot protein RAA2 (RAA2) mRNA, complete cds Length = 514 Score = 198 bits (100), Expect = 2e-47 Identities = 194/224 (86%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 108 gctggtgtacgtgccggcgaacgagatgatgcggtcgctggaggcgctggagcagcggct 167 |||||||||||||||||||||||||| |||| |||||||| |||||||||||| | |||| Sbjct: 103 gctggtgtacgtgccggcgaacgagacgatggggtcgctgcaggcgctggagcggaggct 162 Query: 168 ggggtcgctgggctgggagccgctactacgagaaccgagacatcgtgcagctccaccggc 227 || | ||| || ||||||| ||||||||||| |||| | | | |||||||||||||| | Sbjct: 163 ggcggggctcgggtgggagc-gctactacgaggaccgcgccgtggtgcagctccaccgcc 221 Query: 228 gcgacggcggcgtcgacctcatcgccctcccgcgagactttgccaggttccggtccacac 287 |||||||||||| |||||||||| ||||||| || ||||| ||| | ||||| ||||| | Sbjct: 222 gcgacggcggcgccgacctcatctccctcccccgcgacttcgcccgcttccgctccaccc 281 Query: 288 acatgtacgacgtcgtcgtcaagaacaggcaccacttcaaggtc 331 ||||||||||||||||| |||||||| | |||||||||||||| Sbjct: 282 acatgtacgacgtcgtcctcaagaaccgcgaccacttcaaggtc 325 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 22 gtgtgggtgttccggaaggacggggtgatggagctg 57 |||||||||||| || ||||||||||||| ||||| Sbjct: 25 gtgtgggtgttcaagagggacggggtgatgcagctg 60
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0094H06, from chromosome 3, complete sequence Length = 118075 Score = 198 bits (100), Expect = 2e-47 Identities = 194/224 (86%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 108 gctggtgtacgtgccggcgaacgagatgatgcggtcgctggaggcgctggagcagcggct 167 |||||||||||||||||||||||||| |||| |||||||| |||||||||||| | |||| Sbjct: 34353 gctggtgtacgtgccggcgaacgagacgatggggtcgctgcaggcgctggagcggaggct 34412 Query: 168 ggggtcgctgggctgggagccgctactacgagaaccgagacatcgtgcagctccaccggc 227 || | ||| || ||||||| ||||||||||| |||| | | | |||||||||||||| | Sbjct: 34413 ggcggggctcgggtgggagc-gctactacgaggaccgcgccgtggtgcagctccaccgcc 34471 Query: 228 gcgacggcggcgtcgacctcatcgccctcccgcgagactttgccaggttccggtccacac 287 |||||||||||| |||||||||| ||||||| || ||||| ||| | ||||| ||||| | Sbjct: 34472 gcgacggcggcgccgacctcatctccctcccccgcgacttcgcccgcttccgctccaccc 34531 Query: 288 acatgtacgacgtcgtcgtcaagaacaggcaccacttcaaggtc 331 ||||||||||||||||| |||||||| | |||||||||||||| Sbjct: 34532 acatgtacgacgtcgtcctcaagaaccgcgaccacttcaaggtc 34575 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 22 gtgtgggtgttccggaaggacggggtgatggagctg 57 |||||||||||| || ||||||||||||| ||||| Sbjct: 34275 gtgtgggtgttcaagagggacggggtgatgcagctg 34310
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 198 bits (100), Expect = 2e-47 Identities = 194/224 (86%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 108 gctggtgtacgtgccggcgaacgagatgatgcggtcgctggaggcgctggagcagcggct 167 |||||||||||||||||||||||||| |||| |||||||| |||||||||||| | |||| Sbjct: 12901919 gctggtgtacgtgccggcgaacgagacgatggggtcgctgcaggcgctggagcggaggct 12901860 Query: 168 ggggtcgctgggctgggagccgctactacgagaaccgagacatcgtgcagctccaccggc 227 || | ||| || ||||||| ||||||||||| |||| | | | |||||||||||||| | Sbjct: 12901859 ggcggggctcgggtgggagc-gctactacgaggaccgcgccgtggtgcagctccaccgcc 12901801 Query: 228 gcgacggcggcgtcgacctcatcgccctcccgcgagactttgccaggttccggtccacac 287 |||||||||||| |||||||||| ||||||| || ||||| ||| | ||||| ||||| | Sbjct: 12901800 gcgacggcggcgccgacctcatctccctcccccgcgacttcgcccgcttccgctccaccc 12901741 Query: 288 acatgtacgacgtcgtcgtcaagaacaggcaccacttcaaggtc 331 ||||||||||||||||| |||||||| | |||||||||||||| Sbjct: 12901740 acatgtacgacgtcgtcctcaagaaccgcgaccacttcaaggtc 12901697 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 29636220 cggcggcgccggcgccgagc 29636239 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 22 gtgtgggtgttccggaaggacggggtgatggagctg 57 |||||||||||| || ||||||||||||| ||||| Sbjct: 12901997 gtgtgggtgttcaagagggacggggtgatgcagctg 12901962
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 190 bits (96), Expect = 4e-45 Identities = 211/248 (85%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 90 ggcgccgagcaagaaggcgctggtgtacgtgccggcgaacgagatgatgcggtcgctgga 149 |||| |||||| ||||||||||||| | ||| || ||| |||| |||| |||||| ||| Sbjct: 28314424 ggcgacgagcaggaaggcgctggtgcatgtggcgacgagcgaggtgatccggtcgacgga 28314483 Query: 150 ggcgctggagcagcggctggggtcgctgggctgggagccgctactacgagaaccgagaca 209 ||||||||||| | |||||||| ||||||| ||||||| ||||||||||| |||| | || Sbjct: 28314484 ggcgctggagcggaggctgggggcgctggggtgggagc-gctactacgaggaccgcgcca 28314542 Query: 210 tcgtgcagctccaccggcgcgacggcggcgtcgacctcatcgccctcccgcgagactttg 269 | ||||||||||| ||||||||||| ||| |||||||||| || |||| || ||||| Sbjct: 28314543 ccctgcagctccacaggcgcgacggcagcgccgacctcatctccatcccccgcgacttct 28314602 Query: 270 ccaggttccggtccacacacatgtacgacgtcgtcgtcaagaacaggcaccacttcaagg 329 || | ||||| ||||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct: 28314603 cccgcttccgctccacccacatgtacgacgtcgtcgtcaagaaccgcgaccacttcaagg 28314662 Query: 330 tcgtcgac 337 |||||||| Sbjct: 28314663 tcgtcgac 28314670 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 22 gtgtgggtgttccggaaggacggggtgatggagctg 57 |||||||||||| |||| ||||||||||||||||| Sbjct: 28314380 gtgtgggtgttcaggaacaacggggtgatggagctg 28314415 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 5802538 cgtcggcggcgccggcgccg 5802519
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 190 bits (96), Expect = 4e-45 Identities = 211/248 (85%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 90 ggcgccgagcaagaaggcgctggtgtacgtgccggcgaacgagatgatgcggtcgctgga 149 |||| |||||| ||||||||||||| | ||| || ||| |||| |||| |||||| ||| Sbjct: 39987 ggcgacgagcaggaaggcgctggtgcatgtggcgacgagcgaggtgatccggtcgacgga 40046 Query: 150 ggcgctggagcagcggctggggtcgctgggctgggagccgctactacgagaaccgagaca 209 ||||||||||| | |||||||| ||||||| ||||||| ||||||||||| |||| | || Sbjct: 40047 ggcgctggagcggaggctgggggcgctggggtgggagc-gctactacgaggaccgcgcca 40105 Query: 210 tcgtgcagctccaccggcgcgacggcggcgtcgacctcatcgccctcccgcgagactttg 269 | ||||||||||| ||||||||||| ||| |||||||||| || |||| || ||||| Sbjct: 40106 ccctgcagctccacaggcgcgacggcagcgccgacctcatctccatcccccgcgacttct 40165 Query: 270 ccaggttccggtccacacacatgtacgacgtcgtcgtcaagaacaggcaccacttcaagg 329 || | ||||| ||||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct: 40166 cccgcttccgctccacccacatgtacgacgtcgtcgtcaagaaccgcgaccacttcaagg 40225 Query: 330 tcgtcgac 337 |||||||| Sbjct: 40226 tcgtcgac 40233 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 22 gtgtgggtgttccggaaggacggggtgatggagctg 57 |||||||||||| |||| ||||||||||||||||| Sbjct: 39943 gtgtgggtgttcaggaacaacggggtgatggagctg 39978
>ref|XM_479459.1| Oryza sativa (japonica cultivar-group), mRNA Length = 321 Score = 176 bits (89), Expect = 6e-41 Identities = 204/241 (84%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 90 ggcgccgagcaagaaggcgctggtgtacgtgccggcgaacgagatgatgcggtcgctgga 149 |||| |||||| ||||||||||||| | ||| || ||| |||| |||| |||||| ||| Sbjct: 60 ggcgacgagcaggaaggcgctggtgcatgtggcgacgagcgaggtgatccggtcgacgga 119 Query: 150 ggcgctggagcagcggctggggtcgctgggctgggagccgctactacgagaaccgagaca 209 ||||||||||| | |||||||| ||||||| ||||||| ||||||||||| |||| | || Sbjct: 120 ggcgctggagcggaggctgggggcgctggggtgggagc-gctactacgaggaccgcgcca 178 Query: 210 tcgtgcagctccaccggcgcgacggcggcgtcgacctcatcgccctcccgcgagactttg 269 | ||||||||||| ||||||||||| ||| |||||||||| || |||| || ||||| Sbjct: 179 ccctgcagctccacaggcgcgacggcagcgccgacctcatctccatcccccgcgacttct 238 Query: 270 ccaggttccggtccacacacatgtacgacgtcgtcgtcaagaacaggcaccacttcaagg 329 || | ||||| ||||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct: 239 cccgcttccgctccacccacatgtacgacgtcgtcgtcaagaaccgcgaccacttcaagg 298 Query: 330 t 330 | Sbjct: 299 t 299 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 22 gtgtgggtgttccggaaggacggggtgatggagctg 57 |||||||||||| |||| ||||||||||||||||| Sbjct: 16 gtgtgggtgttcaggaacaacggggtgatggagctg 51
>gb|AY019790.1| Oryza sativa microsatellite MRG2115 containing (AT)X81, genomic sequence Length = 362 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaagaacaggcaccacttcaaggtcgtcgac 337 ||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 358 cacatgtacgacgtcgtcgtcaagaaccgcgaccacttcaaggtcgtcgac 308
>gb|AY019720.1| Oryza sativa microsatellite MRG2045 containing (AT)X44, genomic sequence Length = 288 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaagaacaggcaccacttcaaggtcgtcgac 337 ||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 5 cacatgtacgacgtcgtcgtcaagaaccgcgaccacttcaaggtcgtcgac 55
>emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chromosome X, complete sequence Length = 142846 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctcttt 544 ||||||||||||||||||||||||||| Sbjct: 132362 cttctctctctttccctttttctcttt 132388
>ref|XM_471532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 327 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 ||||||||||||||||||||||||| Sbjct: 280 cacatgtacgacgtcgtcgtcaaga 304
>emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071G03, complete sequence Length = 135169 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 ||||||||||||||||||||||||| Sbjct: 43925 cacatgtacgacgtcgtcgtcaaga 43901
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 ||||||||||||||||||||||||| Sbjct: 12115375 cacatgtacgacgtcgtcgtcaaga 12115351
>dbj|AK120187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034O10, full insert sequence Length = 853 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 ||||||||||||||||||||||||| Sbjct: 366 cacatgtacgacgtcgtcgtcaaga 390
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 73 cagccgtcggcggcgccggcgccg 96 |||||||||||||||||||||||| Sbjct: 1047820 cagccgtcggcggcgccggcgccg 1047797
>ref|NM_187920.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 330 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 274 cacatgtacgacatcgtcgtcaagaac 300
>ref|NM_190038.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 384 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 328 cacatgtacgacatcgtcgtcaagaac 354
>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence Length = 239688 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctct 542 ||||||||||||||||||||||| Sbjct: 207505 tctctctctttccctttttctct 207527
>gb|AY659938.1| Oryza sativa (japonica cultivar-group) RAA1 (RAA1) mRNA, complete cds Length = 729 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 326 cacatgtacgacatcgtcgtcaagaac 352
>gb|AY304538.1| Oryza sativa (japonica cultivar-group) gravity and root development protein mRNA, complete cds Length = 442 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 372 cacatgtacgacatcgtcgtcaagaac 398
>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence Length = 188458 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctct 542 ||||||||||||||||||||||| Sbjct: 81350 tctctctctttccctttttctct 81328
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 40934974 cacatgtacgacatcgtcgtcaagaac 40934948 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 8585573 cacatgtacgacatcgtcgtcaagaac 8585547 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gtcgctggaggcgctggagca 161 ||||||||||||||||||||| Sbjct: 30273167 gtcgctggaggcgctggagca 30273147 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 516 cgcttctctctctttccctttttct 540 |||||||||||| |||||||||||| Sbjct: 12927444 cgcttctctctcattccctttttct 12927468
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 63399 cacatgtacgacatcgtcgtcaagaac 63373
>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08 Length = 139152 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 17768 cacatgtacgacatcgtcgtcaagaac 17742
>dbj|AK070626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056F13, full insert sequence Length = 786 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaagaac 313 |||||||||||| |||||||||||||| Sbjct: 370 cacatgtacgacatcgtcgtcaagaac 396
>emb|AL772240.7| Mouse DNA sequence from clone RP23-284C20 on chromosome 4, complete sequence Length = 93232 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 518 cttctctctctttccctttttctcttt 544 |||||||||||||| |||||||||||| Sbjct: 29704 cttctctctctttctctttttctcttt 29678
>ref|XM_524131.1| PREDICTED: Pan troglodytes similar to putative NFkB activating protein (LOC468744), mRNA Length = 3762 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 1239 gctggaggcgctggagcagcgg 1260
>gb|AF403200.1| Morelia spilota isolate MS8 microsatellite sequence Length = 834 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctcttt 544 ||||||||||||| |||||||||||| Sbjct: 542 ttctctctctttctctttttctcttt 517
>gb|AC120237.5| Rattus norvegicus 1 BAC CH230-453N3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 150760 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctctttg 545 |||||||||||| ||||||||||||| Sbjct: 128600 tctctctctttctctttttctctttg 128575
>ref|NM_017721.3| Homo sapiens coiled-coil and C2 domain containing 1A (CC2D1A), mRNA Length = 3599 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 1247 gctggaggcgctggagcagcgg 1268
>gb|AC147225.3| Mus musculus BAC clone RP23-105L19 from chromosome 6, complete sequence Length = 210239 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctcttt 544 ||||||||||||| |||||||||||| Sbjct: 205481 ttctctctctttctctttttctcttt 205456
>gb|AC168278.2| Mus musculus BAC RP24-83C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 247493 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctcttt 544 ||||||||||||| |||||||||||| Sbjct: 111328 ttctctctctttctctttttctcttt 111353
>emb|AL392084.6| Human DNA sequence from clone RP11-576E23 on chromosome 9 Contains a solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 (SLC25A6) pseudogene, complete sequence Length = 173942 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 524 tctctttccctttttctctttg 545 |||||||||||||||||||||| Sbjct: 10457 tctctttccctttttctctttg 10436
>emb|AL356457.25| Human DNA sequence from clone RP11-145D11 on chromosome 1 Contains part of the DPYD gene for dihydropyrimidine dehydrogenase, a ribosomal protein L26 (RPL26) pseudogene and a pseudogene similar to part of SEC63-like (S. cerevisiae) (SEC63), complete sequence Length = 120510 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctcttt 544 |||||||||||||||||| ||||||| Sbjct: 77217 ttctctctctttccctttctctcttt 77242
>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3' end of the CDK5RAP2 gene for CDK5 regulatory subunit associated protein 2 (C48), complete sequence Length = 148875 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 acggggtgatggagctgaagag 62 |||||||||||||||||||||| Sbjct: 141535 acggggtgatggagctgaagag 141514
>emb|AL034424.9|HS257E24 Human DNA sequence from clone RP1-257E24 on chromosome 20q12-13.1 Contains the 3' end of the SLC13A3 gene for member 3 of solute carrier family 13 (sodium-dependent dicarboxylate transporter), the C20orf123 gene for chromosome 20 open reading frame 123, the 5' end of a novel zinc finger protein gene, ESTs, STSs and GSSs, complete sequence Length = 127735 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctctttg 545 ||||||||||||||||| |||||||| Sbjct: 67285 tctctctctttccctttgtctctttg 67310
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 ggcggcgccggcgccgagcaagaagg 106 |||||||||||||||||||| ||||| Sbjct: 266043 ggcggcgccggcgccgagcaggaagg 266068
>gb|AF536205.1| Homo sapiens hypothetical protein mRNA, complete cds Length = 3715 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 1396 gctggaggcgctggagcagcgg 1417
>gb|BC064981.1| Homo sapiens coiled-coil and C2 domain containing 1A, mRNA (cDNA clone MGC:71119 IMAGE:6585236), complete cds Length = 3599 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 1247 gctggaggcgctggagcagcgg 1268
>gb|BC006556.2| Homo sapiens coiled-coil and C2 domain containing 1A, mRNA (cDNA clone IMAGE:2823063) Length = 2799 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 581 gctggaggcgctggagcagcgg 602
>dbj|AB097002.1| Homo sapiens mRNA for putative NFkB activating protein, complete cds, clone: 023N Length = 3579 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 1285 gctggaggcgctggagcagcgg 1306
>dbj|AK123155.1| Homo sapiens cDNA FLJ41160 fis, clone BRACE2039327 Length = 1841 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 1101 gctggaggcgctggagcagcgg 1122
>dbj|AK023399.1| Homo sapiens cDNA FLJ13337 fis, clone OVARC1001880 Length = 2055 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 168 gctggaggcgctggagcagcgg 189
>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence Length = 214530 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 132077 gctggaggcgctggagcagcgg 132098
>gb|AC017082.4| Homo sapiens BAC clone RP11-472M4 from 2, complete sequence Length = 183783 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctcttt 544 |||||||||||| ||||||||||||| Sbjct: 149052 ttctctctcttttcctttttctcttt 149077
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 tcgctggaggcgctggagcagcggctgggg 171 ||||||||| ||||||| |||||||||||| Sbjct: 4515882 tcgctggagacgctggaacagcggctgggg 4515853
>dbj|AK000248.1| Homo sapiens cDNA FLJ20241 fis, clone COLF6335 Length = 2126 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gctggaggcgctggagcagcgg 165 |||||||||||||||||||||| Sbjct: 1102 gctggaggcgctggagcagcgg 1123
>emb|AJ272308.1|HVU272308 Hordeum vulgare mRNA for sucrose transporter 2 (sut2 gene) Length = 2018 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccgagcaag 102 |||||||||||||||||||| ||||| Sbjct: 177 cgtcggcggcgccggcgccgcgcaag 202
>dbj|AK110327.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-D08, full insert sequence Length = 2577 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 gcggtcgctggaggcgctggag 159 |||||||||||||||||||||| Sbjct: 1929 gcggtcgctggaggcgctggag 1950
>gb|DQ340235.1| Glycine max cytochrome P450 monooxygenase CYP84A (CYP84A) mRNA, complete cds Length = 1857 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 acggcggcgtcgacctcatcgc 252 |||||||||||||||||||||| Sbjct: 553 acggcggcgtcgacctcatcgc 532
>emb|BX663609.29| Zebrafish DNA sequence from clone DKEY-182H7 in linkage group 7, complete sequence Length = 248960 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctctttg 545 |||||||||||| ||||||||||||| Sbjct: 204067 tctctctctttctctttttctctttg 204092
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttct 540 |||||||||||||||||||||| Sbjct: 106618 ttctctctctttccctttttct 106639
>gb|AC123937.3| Mus musculus BAC clone RP23-408M14 from 6, complete sequence Length = 164294 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctcttt 544 ||||||||||||| |||||||||||| Sbjct: 161294 ttctctctctttctctttttctcttt 161269
>gb|AC169036.3| Mus musculus BAC clone RP23-382O15 from chromosome 5, complete sequence Length = 215306 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctct 542 |||||||||||||| |||||||||| Sbjct: 193625 cttctctctctttctctttttctct 193649
>gb|AC120437.7| Mus musculus chromosome 5, clone RP24-571K14, complete sequence Length = 147493 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||||| |||||||||| Sbjct: 68443 tctctctctttccccttttctcttt 68467
>ref|XM_466931.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1105 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccggcgccgagcaagaaggcg 108 ||||||||||||||||||||| Sbjct: 208 ccggcgccgagcaagaaggcg 228
>ref|NM_191843.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gtcgctggaggcgctggagca 161 ||||||||||||||||||||| Sbjct: 360 gtcgctggaggcgctggagca 380
>gb|AF389361.1| Oryctolagus cuniculus microsatellite D1L5A6 sequence Length = 412 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||| |||||||||||| Sbjct: 211 tctctctctttctctttttctcttt 187
>gb|AC092212.32| Trypanosoma brucei chromosome 8 clone RPCI93-10J17, complete sequence Length = 168741 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 165845 tctctctctttccctctttctcttt 165869
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 1062979 tctctctctttccctctttctcttt 1062955
>gb|AC090046.10| Mus musculus chromosome 6, clone RP23-82P24, complete sequence Length = 179099 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 40112 tctctctctttccctctttctcttt 40136
>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence Length = 211657 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||| |||||||||||| Sbjct: 193390 tctctctctttctctttttctcttt 193366
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 gccgaggtgcagccgtcggcg 84 ||||||||||||||||||||| Sbjct: 2764730 gccgaggtgcagccgtcggcg 2764750
>gb|AC114605.11| Mus musculus chromosome 5, clone RP23-373H20, complete sequence Length = 163969 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 518 cttctctctctttccctttttctct 542 |||||||||||||| |||||||||| Sbjct: 48207 cttctctctctttctctttttctct 48183
>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence Length = 197574 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 518 cttctctctctttccctttttctctttgg 546 ||||||||||| || |||||||||||||| Sbjct: 106764 cttctctctctctctctttttctctttgg 106736
>gb|AC128667.3| Mus musculus BAC clone RP24-160B11 from chromosome 17, complete sequence Length = 164685 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||| |||||||||||| Sbjct: 78754 tctctctctttctctttttctcttt 78730
>gb|AC006456.3| Homo sapiens PAC clone RP5-969D4 from 7, complete sequence Length = 75609 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 ttccctttttctctttggtct 549 ||||||||||||||||||||| Sbjct: 60446 ttccctttttctctttggtct 60426
>gb|AY177699.1| Oryza sativa (japonica cultivar-group) transcription factor MADS32 mRNA, complete cds Length = 684 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gtcgctggaggcgctggagca 161 ||||||||||||||||||||| Sbjct: 360 gtcgctggaggcgctggagca 380
>gb|AC121977.3| Mus musculus BAC clone RP24-287A16 from chromosome 6, complete sequence Length = 186279 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 56062 tctctctctttccctctttctcttt 56038
>gb|AC093716.3| Homo sapiens BAC clone RP11-702L4 from 7, complete sequence Length = 77028 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||| ||||||||||||| Sbjct: 11335 tctctctcttttcctttttctcttt 11359
>emb|Z98047.1|HS162H14 Human DNA sequence from clone RP1-162H14 on chromosome 22, complete sequence Length = 47542 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||||| ||||||| Sbjct: 20009 tctctctctttccctttctctcttt 19985
>emb|AL683871.15| Human DNA sequence from clone RP13-76L22 on chromosome X, complete sequence Length = 175765 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 14685 tctctctctttccctttttct 14665
>emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chromosome 6 Contains the TRIP7 gene for thyroid hormone receptor interactor 7, a ribosomal protein S18 (RPS18) pseudogene and part of a novel gene, complete sequence Length = 152086 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||| ||||||||||||||| Sbjct: 146305 tctctctctctccctttttctcttt 146281
>gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, complete sequence Length = 200979 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctct 542 |||||||||||||| |||||||||| Sbjct: 68969 cttctctctctttctctttttctct 68993
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 accggcgcgacggcggcgtcg 242 ||||||||||||||||||||| Sbjct: 248215 accggcgcgacggcggcgtcg 248235
>gb|AC164626.6| Mus musculus 6 BAC RP23-472D18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190308 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 123353 tctctctctttccctctttctcttt 123377
>emb|AL663086.6| Mouse DNA sequence from clone RP23-64N1 on chromosome 11, complete sequence Length = 161810 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctct 542 ||||||||||||||||||| ||||| Sbjct: 99369 cttctctctctttccctttctctct 99393
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 gctggaggcgctggagcagcg 164 ||||||||||||||||||||| Sbjct: 4406135 gctggaggcgctggagcagcg 4406115
>gb|AC096639.2| Homo sapiens chromosome 1 clone RP11-323I1, complete sequence Length = 195410 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 518 cttctctctctttccctttttctct 542 ||||||||||| ||||||||||||| Sbjct: 37731 cttctctctctctccctttttctct 37707
>gb|AC090573.6| Homo sapiens chromosome 8, clone RP11-440B23, complete sequence Length = 204032 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||| |||||||||||| Sbjct: 96758 tctctctctttctctttttctcttt 96734
>gb|AC093862.3| Homo sapiens BAC clone RP11-549C16 from 4, complete sequence Length = 172195 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||||| ||||||| Sbjct: 162077 tctctctctttccctttctctcttt 162053
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 7782473 tctctctctttccctttttct 7782453 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 8512995 cgtcggcggcgccggcgccg 8513014
>gb|AC099314.3| Homo sapiens chromosome 16 clone RP11-354M1, complete sequence Length = 184945 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||| ||||||||||||||| Sbjct: 54410 tctctctctctccctttttctcttt 54386
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccggcgccgagcaagaaggcg 108 ||||||||||||||||||||| Sbjct: 25516025 ccggcgccgagcaagaaggcg 25516045 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 |||||||||||| |||||||||||| Sbjct: 15497908 cacatgtacgacatcgtcgtcaaga 15497884 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 1789085 cggcggcgccggcgccgagc 1789066
>dbj|AB181929.1| Gorilla gorilla DNA, corresponding to Human chromosome 12 (12q15), AC005294.1 48327..38746, 9579..13746 and Human chromosome 6, AL589939.2 17852..21988 Length = 13746 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 7855 tctctctctttccctctttctcttt 7831
>gb|AC108051.3| Homo sapiens BAC clone RP11-332D2 from 2, complete sequence Length = 119875 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 518 cttctctctctttccctttttctct 542 ||||||||||||| ||||||||||| Sbjct: 68521 cttctctctcttttcctttttctct 68497
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gtcgctggaggcgctggagca 161 ||||||||||||||||||||| Sbjct: 61486 gtcgctggaggcgctggagca 61466
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctctt 543 |||||||||||||||||| |||||| Sbjct: 119829 ttctctctctttccctttctctctt 119853
>gb|AC005294.1| Homo sapiens 12 BAC GSHB-410F4 (Genome Systems Human Bac Library) complete sequence Length = 113762 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 40479 tctctctctttccctctttctcttt 40503
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 gccgtcggcggcgccggcgccgagc 99 |||||||||||||||||||| |||| Sbjct: 4400657 gccgtcggcggcgccggcgcggagc 4400681
>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence Length = 213223 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 163988 tctctctctttccctttttct 163968
>gb|AC093128.3| Papio anubis clone RP41-374D15, complete sequence Length = 135622 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 100673 tctctctctttccctttttct 100693
>gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-478J18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154732 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 518 cttctctctctttccctttttctct 542 ||||||||||| ||||||||||||| Sbjct: 141693 cttctctctctctccctttttctct 141669
>gb|AC141634.4| Mus musculus BAC clone RP24-69A18 from chromosome 6, complete sequence Length = 227680 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||| |||||||||||| Sbjct: 79585 tctctctctttctctttttctcttt 79609
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cggcggcgtcgacctcatcgc 252 ||||||||||||||||||||| Sbjct: 399568 cggcggcgtcgacctcatcgc 399588 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gcgacggcggcgtcgacctc 247 |||||||||||||||||||| Sbjct: 1513838 gcgacggcggcgtcgacctc 1513819
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1140D12 Length = 139301 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 516 cgcttctctctctttccctttttct 540 |||||||||||| |||||||||||| Sbjct: 78885 cgcttctctctcattccctttttct 78909
>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0064I23 Length = 161865 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 29676 tctctctctttccctttttct 29656
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1581_H09 Length = 86699 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccggcgccgagcaagaaggcg 108 ||||||||||||||||||||| Sbjct: 7424 ccggcgccgagcaagaaggcg 7444
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0644G05 Length = 143119 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 |||||||||||| |||||||||||| Sbjct: 25468 cacatgtacgacatcgtcgtcaaga 25444
>dbj|AK104536.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F06, full insert sequence Length = 1081 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 |||||||||||| |||||||||||| Sbjct: 440 cacatgtacgacatcgtcgtcaaga 464
>emb|CT573086.9| Mouse DNA sequence from clone RP23-163K5 on chromosome 16, complete sequence Length = 208384 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 151876 tctctctctttccctttttct 151856
>dbj|AK065150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B08, full insert sequence Length = 1099 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 |||||||||||| |||||||||||| Sbjct: 481 cacatgtacgacatcgtcgtcaaga 505
>emb|BX072559.10| Zebrafish DNA sequence from clone CH211-272F15 in linkage group 20, complete sequence Length = 156196 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 55455 tctctctctttccctttttct 55435
>dbj|AK061568.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F05, full insert sequence Length = 1105 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccggcgccgagcaagaaggcg 108 ||||||||||||||||||||| Sbjct: 208 ccggcgccgagcaagaaggcg 228
>dbj|AK060911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F11, full insert sequence Length = 1081 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 287 cacatgtacgacgtcgtcgtcaaga 311 |||||||||||| |||||||||||| Sbjct: 440 cacatgtacgacatcgtcgtcaaga 464
>gb|AC153365.7| Mus musculus 10 BAC RP23-273K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207891 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||| ||||||||||| Sbjct: 145295 tctctctctttccttttttctcttt 145271
>gb|AC007628.3|AC007628 Genomic sequence of Homo sapiens clone N0576M10 from chromosome 18, complete sequence Length = 140356 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctct 542 |||||||||||||| |||||||||| Sbjct: 63697 cttctctctctttctctttttctct 63721
>gb|AC006582.13|AC006582 Pan troglodytes 12cp12 BAC RPCI43-77C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186092 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 59131 tctctctctttccctctttctcttt 59155
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence Length = 215708 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 128021 tctctctctttccctttttct 128041
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 ggcgaacgagatgatgcggtc 143 ||||||||||||||||||||| Sbjct: 2566169 ggcgaacgagatgatgcggtc 2566189
>gb|AC153018.4| Mus musculus BAC clone RP23-95J19 from chromosome 17, complete sequence Length = 223539 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||| |||||||||||| Sbjct: 30859 tctctctctttctctttttctcttt 30883
>dbj|AP003155.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-567F3, complete sequences Length = 157385 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 tctctctctttccctttttct 540 ||||||||||||||||||||| Sbjct: 99739 tctctctctttccctttttct 99759
>gb|AC132410.4| Mus musculus BAC clone RP23-348E10 from 8, complete sequence Length = 175530 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 ||||||||||||||| ||||||||| Sbjct: 46257 tctctctctttccctctttctcttt 46233 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctctt 543 ||||||||||||||| |||||||| Sbjct: 46151 tctctctctttccctctttctctt 46128
>emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on chromosome X, complete sequence Length = 189848 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctcttt 544 |||||||||||| |||||||||||| Sbjct: 109843 tctctctctttctctttttctcttt 109819
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 aggcgctggagcagcggctgg 169 ||||||||||||||||||||| Sbjct: 2388173 aggcgctggagcagcggctgg 2388153
>gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, complete sequence Length = 184981 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 518 cttctctctctttccctttttctct 542 ||||||||||||||||||| ||||| Sbjct: 129154 cttctctctctttccctttctctct 129130
>gb|AC116696.20| Mus musculus chromosome 3, clone RP24-425N23, complete sequence Length = 168053 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctctttggt 547 ||||||||| || ||||||||||||||| Sbjct: 75824 tctctctctctctctttttctctttggt 75797
>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190042 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctctt 543 ||||||||||||||| |||||||| Sbjct: 144401 tctctctctttccctctttctctt 144378 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctctt 543 ||||||||||||||| |||||||| Sbjct: 18966 tctctctctttccctctttctctt 18943
>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence Length = 214959 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ttctctctctttcccttttt 538 |||||||||||||||||||| Sbjct: 117018 ttctctctctttcccttttt 116999
>ref|XM_464031.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 340 cggcggcgccggcgccgagc 321
>ref|XM_469612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 575 cggcggcgccggcgccgagc 594
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 102250 cgtcggcggcgccggcgccg 102231
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 cgtggcggggttttggatga 437 |||||||||||||||||||| Sbjct: 1680690 cgtggcggggttttggatga 1680671
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 69754 cgtcggcggcgccggcgccg 69773
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 cgtggcggggttttggatga 437 |||||||||||||||||||| Sbjct: 1736 cgtggcggggttttggatga 1717
>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence Length = 134290 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 cgtggcggggttttggatga 437 |||||||||||||||||||| Sbjct: 96997 cgtggcggggttttggatga 96978
>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence Length = 203772 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 |||||||||||||||||| ||||| Sbjct: 60858 ttctctctctttccctttctctct 60835
>gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, complete sequence Length = 181471 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tcgacatctagacatgcatc 352 |||||||||||||||||||| Sbjct: 2574 tcgacatctagacatgcatc 2555
>gb|AY676929.1| Oryza sativa (indica cultivar-group) transcription factor WRKY12 (WRKY12) mRNA, complete cds Length = 1464 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 1284 cgtcggcggcgccggcgccg 1265
>gb|AC099631.6| Mus musculus chromosome 1, clone RP24-93F22, complete sequence Length = 185048 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tctctttccctttttctctt 543 |||||||||||||||||||| Sbjct: 66668 tctctttccctttttctctt 66687
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 41924 cgtcggcggcgccggcgccg 41905
>gb|AC147162.2| Mus musculus BAC clone RP24-270A10 from chromosome 13, complete sequence Length = 170563 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 ctctctctttccctttttctcttt 544 ||||||||||||| |||||||||| Sbjct: 92377 ctctctctttccccttttctcttt 92354
>gb|BC022388.1| Homo sapiens dimethylglycine dehydrogenase, mRNA (cDNA clone IMAGE:4608862), partial cds Length = 2802 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 ctctctttccctttttctct 542 |||||||||||||||||||| Sbjct: 2688 ctctctttccctttttctct 2707
>gb|AC110521.14| Mus musculus chromosome 12, clone RP23-50H15, complete sequence Length = 189474 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 ctctctctttccctttttctcttt 544 ||||| |||||||||||||||||| Sbjct: 118252 ctctccctttccctttttctcttt 118275
>gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, complete sequence Length = 204724 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 ctctctctttccctttttctcttt 544 |||||||| ||||||||||||||| Sbjct: 196147 ctctctctctccctttttctcttt 196124
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 35630 ttctctctctttctctttttctct 35607
>ref|XR_003084.1| PREDICTED: Mus musculus similar to smt3-specific isopeptidase 1 (LOC625377), mRNA Length = 1450 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 103 cggcggcgccggcgccgagc 122
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 14410 cggcggcgccggcgccgagc 14391
>gb|AC073345.11| Homo sapiens BAC clone RP11-630O5 from 7, complete sequence Length = 144834 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 27145 ttctctctctttctctttttctct 27168
>gb|AC069008.6| Homo sapiens BAC clone RP11-815N20 from 7, complete sequence Length = 90252 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ctctctctttccctttttct 540 |||||||||||||||||||| Sbjct: 69767 ctctctctttccctttttct 69786
>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete sequence Length = 198825 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 ctctctctttccctttttctcttt 544 ||||||||||||| |||||||||| Sbjct: 164528 ctctctctttccccttttctcttt 164551
>ref|XM_819491.1| Trypanosoma brucei TREU927 clone RPCI93-2F2 hypothetical protein (Tb927.7.6210) partial mRNA Length = 786 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 cgtggcggggttttggatga 437 |||||||||||||||||||| Sbjct: 147 cgtggcggggttttggatga 166
>gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, complete sequence Length = 220120 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 83176 ttctctctctttctctttttctct 83153
>gb|AC146380.3| Pan troglodytes BAC clone RP43-99L3 from 7, complete sequence Length = 77134 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 60459 ttctctctctttctctttttctct 60436
>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence Length = 214712 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tttccctttttctctttggt 547 |||||||||||||||||||| Sbjct: 210769 tttccctttttctctttggt 210788
>gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosome 12, complete sequence Length = 199646 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 2424 ttctctctctttctctttttctct 2401
>gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete sequence Length = 192730 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 cttctctctctttccctttt 537 |||||||||||||||||||| Sbjct: 183600 cttctctctctttccctttt 183581
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12 Length = 299350 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 cgagatgatgcggtcgctggaggcgctg 156 |||||||| ||||||| ||||||||||| Sbjct: 227728 cgagatgaagcggtcgatggaggcgctg 227755
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 ggagctgaagagcgccgagg 70 |||||||||||||||||||| Sbjct: 289831 ggagctgaagagcgccgagg 289812
>gb|AC125351.3| Mus musculus BAC clone RP23-442M3 from chromosome 12, complete sequence Length = 188024 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 ctctttccctttttctcttt 544 |||||||||||||||||||| Sbjct: 120812 ctctttccctttttctcttt 120831
>gb|AC109261.7| Mus musculus chromosome 17, clone RP23-23D19, complete sequence Length = 227994 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 cttctctctctttccctttt 537 |||||||||||||||||||| Sbjct: 36513 cttctctctctttccctttt 36494
>gb|L13845.1|RHMACT206O Sinorhizobium medicae ActA (actA) and DNA-binding protein (phrR) genes, complete cds Length = 2951 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ggtgcagccgtcggcggcgccggc 92 |||||||||| ||||||||||||| Sbjct: 1114 ggtgcagccgacggcggcgccggc 1091
>emb|X65616.1|SRCEL1G S.reticuli cel1 gene for mycelium-associated cellulase (avicelase 1) Length = 3791 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 acgacgtcgtcgtcaagaac 313 |||||||||||||||||||| Sbjct: 151 acgacgtcgtcgtcaagaac 170
>gb|AF536970.1| Oryza sativa (japonica cultivar-group) putative phosphate transporter OsPT10 gene, complete cds Length = 3677 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gatgatgcggtcgctggagg 151 |||||||||||||||||||| Sbjct: 2391 gatgatgcggtcgctggagg 2410
>emb|AL844892.5| Human DNA sequence from clone RP11-396M20 on chromosome 10 Contains the 5' end of the GRID1 gene for glutamate receptor (ionotropic) delta 1, the 3' end of the gene for friend of EBNA2 (FOE) (KIAA0261) and five CpG islands, complete sequence Length = 167780 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 79003 ttctctctctttctctttttctct 78980
>emb|AL662915.5| Human DNA sequence from clone RP11-350M10 on chromosome 1, complete sequence Length = 55929 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 517 gcttctctctctttccctttttct 540 |||||||||| ||||||||||||| Sbjct: 13791 gcttctctctttttccctttttct 13768
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the 5' end of the CBARA1 gene for calcium binding atopy-related autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a novel gene, a novel pseudogene (FLJ12684) and a CpG island, complete sequence Length = 163632 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctttccctttttctctttgg 546 |||||||||||||||||||| Sbjct: 137259 ctttccctttttctctttgg 137278
>emb|AL356976.30| Human DNA sequence from clone RP4-700P11 on chromosome 1p32.1-32.3 Contains the gene for glutathione peroxidase 6 (GPX6) and the 5' end of gene MGC52498, complete sequence Length = 64323 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 tccggtccacacacatgtac 295 |||||||||||||||||||| Sbjct: 46314 tccggtccacacacatgtac 46295
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24, complete sequence Length = 142852 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 14186 cgtcggcggcgccggcgccg 14167
>emb|AL355315.18| Human DNA sequence from clone RP11-548K23 on chromosome 10 Contains the ANKRD2 gene for ankyrin repeat domain 2 (stretch responsive muscle), six novel genes, the gene for phosphatidylinositol 4-kinase type II (PI4KII) and four CpG islands, complete sequence Length = 157193 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 |||||||||||||||||| ||||| Sbjct: 123543 ttctctctctttccctttctctct 123520
>emb|AL159973.16| Human DNA sequence from clone RP11-197L7 on chromosome 13q13.1-13.3 Contains a novel gene similar to binder of Arl Two (Bart1), the RFXAP gene for regulatory factor X-associated protein and a CpG_island, complete sequence Length = 76174 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ctctctctttccctttttct 540 |||||||||||||||||||| Sbjct: 33642 ctctctctttccctttttct 33623
>emb|AL160409.12| Human DNA sequence from clone RP11-406D17 on chromosome 10 Contains the 3' end of the PARD3 gene for par-3 partitioning defective 3 homolog (C.elegans), complete sequence Length = 106198 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ctctctctttccctttttct 540 |||||||||||||||||||| Sbjct: 64629 ctctctctttccctttttct 64610
>emb|AL158160.8| Human DNA sequence from clone RP11-165O3 on chromosome 10 Contains the gene for a novel protein and a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23,NPM,NUMATRIN) pseudogene, complete sequence Length = 113036 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 517 gcttctctctctttccctttttct 540 |||||||||||| ||||||||||| Sbjct: 19727 gcttctctctctctccctttttct 19704
>gb|AC114324.2| Homo sapiens chromosome 5 clone RP11-93O17, complete sequence Length = 150512 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 ccctttttctctttggtctc 550 |||||||||||||||||||| Sbjct: 96110 ccctttttctctttggtctc 96091
>emb|AL138717.6| Human DNA sequence from clone RP11-11D8 on chromosome 6 Contains the 5' end of the NCUBE1 gene for non-canonical ubiquitin conjugating enzyme 1, the gene for a novel protein similar to rag C protein (GTR2), an NACA (nascent-polypeptide-associated complex alpha polypeptide) pseudogene, the 5' end of the ANKRD6 gene for ankyrin repeat domain 6 (KIAA0957) and three CpG islands, complete sequence Length = 104309 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 tctttccctttttctctttggtct 549 ||||||||| |||||||||||||| Sbjct: 19642 tctttccctctttctctttggtct 19665
>ref|XM_962700.1| PREDICTED: Tribolium castaneum similar to Patched protein (Hedgehog receptor) (LOC656155), mRNA Length = 3528 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gcgcgacggcggcgtcgacc 245 |||||||||||||||||||| Sbjct: 88 gcgcgacggcggcgtcgacc 69
>gb|AC161755.3| Mus musculus BAC clone RP24-363L9 from chromosome 16, complete sequence Length = 195244 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 |||||||||||||||| ||||||| Sbjct: 66231 ttctctctctttccctctttctct 66208
>gb|AF163863.1| Mustela vison tyrosine aminotransferase gene, complete cds Length = 12379 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 4906 ttctctctctttctctttttctct 4883
>emb|CR936685.1| Homo sapiens mRNA; cDNA DKFZp686C08243 (from clone DKFZp686C08243) Length = 7000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tctctctctttccctttttc 539 |||||||||||||||||||| Sbjct: 2929 tctctctctttccctttttc 2948
>emb|AL591376.11| Mouse DNA sequence from clone RP23-404C20 on chromosome 11 Contains the 5' end of the Nlk gene for nemo like kinase, a laminin receptor 1 (ribosomal protein SA) (Lamr1) pseudogene and a novel gene, complete sequence Length = 141489 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tttccctttttctctttggt 547 |||||||||||||||||||| Sbjct: 111147 tttccctttttctctttggt 111166
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctct 542 |||||||||||||||||| ||||| Sbjct: 153214 ttctctctctttccctttctctct 153237
>emb|BX511109.4| Zebrafish DNA sequence from clone DKEY-288G16 in linkage group 7, complete sequence Length = 124061 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tctctctctttccctttttc 539 |||||||||||||||||||| Sbjct: 30385 tctctctctttccctttttc 30366
>emb|CR857981.1| Pongo pygmaeus mRNA; cDNA DKFZp469G0713 (from clone DKFZp469G0713) Length = 3399 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ttggatgatgctaggttttc 449 |||||||||||||||||||| Sbjct: 2560 ttggatgatgctaggttttc 2541
>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence Length = 169187 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ctctctctttccctttttct 540 |||||||||||||||||||| Sbjct: 90077 ctctctctttccctttttct 90096
>gb|AC068394.14| Homo sapiens chromosome 8, clone RP11-340H8, complete sequence Length = 177005 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 63218 ttctctctctttctctttttctct 63195
>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence Length = 100538 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 517 gcttctctctctttccctttttct 540 |||||||| ||||||||||||||| Sbjct: 47657 gcttctctttctttccctttttct 47680
>gb|AE005979.1| Caulobacter crescentus CB15 section 305 of 359 of the complete genome Length = 11597 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 caggcgcaaggcggtgggtttcct 499 |||||||| ||||||||||||||| Sbjct: 6044 caggcgcatggcggtgggtttcct 6021
>gb|AE005968.1| Caulobacter crescentus CB15 section 294 of 359 of the complete genome Length = 11996 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gcgacggcggcgtcgacctc 247 |||||||||||||||||||| Sbjct: 8518 gcgacggcggcgtcgacctc 8499
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 38819 cgtcggcggcgccggcgccg 38800
>gb|AC098615.2| Homo sapiens chromosome 3 clone RP11-268I20, complete sequence Length = 167486 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 141918 ttctctctctttctctttttctct 141895
>tpg|BK005056.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 53 (WRKY53) gene, complete cds Length = 1871 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 1691 cgtcggcggcgccggcgccg 1672
>gb|AC021063.16| Mus Musculus Chromosome 18 RP23-179K16, complete sequence Length = 202807 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 75158 ttctctctctttctctttttctct 75135
>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence Length = 171634 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 catctttctggttcatgttt 368 |||||||||||||||||||| Sbjct: 65947 catctttctggttcatgttt 65966
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 gccgaggtgcagccgtcggcggcgccgg 91 |||||||||||| |||||||||||||| Sbjct: 3753956 gccgaggtgcaggggtcggcggcgccgg 3753983
>gb|AC090186.7| Homo sapiens chromosome 8, clone RP11-11C20, complete sequence Length = 143753 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 100618 ttctctctctttctctttttctct 100641
>gb|AC091898.2| Homo sapiens chromosome 5 clone RP11-152K4, complete sequence Length = 177709 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 |||||||||||||||||| ||||| Sbjct: 115073 ttctctctctttccctttctctct 115050
>gb|AC093663.4| Homo sapiens BAC clone RP11-477G18 from 4, complete sequence Length = 171745 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tccctttttctctttggtct 549 |||||||||||||||||||| Sbjct: 157962 tccctttttctctttggtct 157943
>gb|AC174742.8| Mus musculus BAC RP24-258O12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163118 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 tctctctctttccctttttctctt 543 ||||||||||||||| |||||||| Sbjct: 161574 tctctctctttccctctttctctt 161551
>gb|AC020937.6| Homo sapiens chromosome 5 clone CTD-2299I21, complete sequence Length = 94161 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctctctttccctttttctct 542 |||||||||||||||||||| Sbjct: 79098 ctctctttccctttttctct 79079
>gb|AY048850.1| Halobacterium salinarum strain J7 plasmid pHH205, complete sequence Length = 16341 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 gcgacggcggcgtcgacctc 247 |||||||||||||||||||| Sbjct: 3295 gcgacggcggcgtcgacctc 3314
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 ggaggcgctggagcagcggctggg 170 ||||| |||||||||||||||||| Sbjct: 185944 ggaggagctggagcagcggctggg 185921
>gb|AC124595.4| Mus musculus BAC clone RP23-18J1 from chromosome 12, complete sequence Length = 210781 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 ctctttccctttttctcttt 544 |||||||||||||||||||| Sbjct: 198619 ctctttccctttttctcttt 198600
>gb|AC008502.8| Homo sapiens chromosome 5 clone CTC-442G11, complete sequence Length = 123495 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctctctttccctttttctct 542 |||||||||||||||||||| Sbjct: 9403 ctctctttccctttttctct 9384
>dbj|AK014928.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921520E09 product:unclassifiable, full insert sequence Length = 1785 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ttctctctctttcccttttt 538 |||||||||||||||||||| Sbjct: 1353 ttctctctctttcccttttt 1372
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 23372789 cgtcggcggcgccggcgccg 23372808 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 2552650 cgtcggcggcgccggcgccg 2552631
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 22153329 cgtcggcggcgccggcgccg 22153310
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtcggcggcgccggcgccga 97 |||||||||||||||||||| Sbjct: 21989559 gtcggcggcgccggcgccga 21989578 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gatgatgcggtcgctggagg 151 |||||||||||||||||||| Sbjct: 12535255 gatgatgcggtcgctggagg 12535236 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ggtgcagccgtcggcggcgc 88 |||||||||||||||||||| Sbjct: 4393482 ggtgcagccgtcggcggcgc 4393463
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 24356134 cgtcggcggcgccggcgccg 24356115 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 16016499 cgtcggcggcgccggcgccg 16016480
>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster (med-ORF1 - 30) and ORF P - Z , partial and complete cds Length = 36202 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gccgtcggcggcgccggcgccgag 98 ||||||| |||||||||||||||| Sbjct: 17047 gccgtcgtcggcgccggcgccgag 17070
>gb|AC111000.3| Homo sapiens BAC clone RP13-644M16 from 4, complete sequence Length = 156578 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctc 541 |||||| ||||||||||||||||| Sbjct: 27548 cttctccctctttccctttttctc 27571
>gb|AC068724.7|AC068724 Homo sapiens chromosome 15 clone RP11-473C18 map 15q15, complete sequence Length = 190727 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 ctctctctttccctttttctcttt 544 ||||||||||| |||||||||||| Sbjct: 43481 ctctctctttctctttttctcttt 43458
>gb|AC157525.2| Pan troglodytes BAC clone CH251-519D18 from chromosome unknown, complete sequence Length = 234137 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 ctctctttccctttttctct 542 |||||||||||||||||||| Sbjct: 74354 ctctctttccctttttctct 74373
>gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome 9, complete sequence Length = 247708 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 ctctctctttccctttttctcttt 544 |||||||| ||||||||||||||| Sbjct: 220943 ctctctctctccctttttctcttt 220966
>gb|AC009173.9| Homo sapiens chromosome 16 clone RP11-99H5, complete sequence Length = 149842 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 cttctctctctttccctttt 537 |||||||||||||||||||| Sbjct: 32705 cttctctctctttccctttt 32686
>gb|AC154904.4| Mus musculus BAC clone RP23-416C3 from chromosome 12, complete sequence Length = 194547 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 140283 ttctctctctttctctttttctct 140260
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 67428 cggcggcgccggcgccgagc 67447
>gb|AE004680.1| Pseudomonas aeruginosa PAO1, section 241 of 529 of the complete genome Length = 12370 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 5023 cggcggcgccggcgccgagc 5004
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 catctttctggttcatgttt 368 |||||||||||||||||||| Sbjct: 93141 catctttctggttcatgttt 93122
>gb|AC112197.3| Homo sapiens chromosome 5 clone RP11-442I12, complete sequence Length = 175775 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ttctctctctttcccttttt 538 |||||||||||||||||||| Sbjct: 50297 ttctctctctttcccttttt 50278
>gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 227305 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 ttctctctctttccctttttctct 542 |||||||||||||||| ||||||| Sbjct: 210066 ttctctctctttccctctttctct 210089
>gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana Clone F17K4 From Chromosome V, complete sequence Length = 89453 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ttctctctctttcccttttt 538 |||||||||||||||||||| Sbjct: 26847 ttctctctctttcccttttt 26866
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 109566 cgtcggcggcgccggcgccg 109547
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 34205 cgtcggcggcgccggcgccg 34224
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ggtgcagccgtcggcggcgc 88 |||||||||||||||||||| Sbjct: 41163 ggtgcagccgtcggcggcgc 41144
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtcggcggcgccggcgccga 97 |||||||||||||||||||| Sbjct: 27432 gtcggcggcgccggcgccga 27451
>dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0421H01 Length = 142638 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gatgatgcggtcgctggagg 151 |||||||||||||||||||| Sbjct: 108989 gatgatgcggtcgctggagg 108970
>emb|BX005248.13| Zebrafish DNA sequence from clone CH211-155H12 in linkage group 8, complete sequence Length = 185135 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 522 tctctctttccctttttctctttg 545 ||||||||||| |||||||||||| Sbjct: 157578 tctctctttccttttttctctttg 157555
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gatgatgcggtcgctggagg 151 |||||||||||||||||||| Sbjct: 17568 gatgatgcggtcgctggagg 17549
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 107097 cggcggcgccggcgccgagc 107078
>dbj|AP005926.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054E15 Length = 142898 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 138344 cgtcggcggcgccggcgccg 138363
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 ctctttccctttttctcttt 544 |||||||||||||||||||| Sbjct: 106999 ctctttccctttttctcttt 106980
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 25729 cggcggcgccggcgccgagc 25710
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 116292 cgtcggcggcgccggcgccg 116273
>emb|AJ245398.1|RME245398 Rhizobium meliloti nuoA1, nuoB1, nuoC1, nuoD1, urf1, nuoE1, nuoF1 and urf2 genes (nuo1 gene cluster) Length = 6229 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 cgagatgatgcggtcgctggaggcgctg 156 |||||||| ||||||| ||||||||||| Sbjct: 2749 cgagatgaagcggtcgatggaggcgctg 2776
>dbj|AK121190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086B03, full insert sequence Length = 1962 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 1399 cgtcggcggcgccggcgccg 1380
>dbj|AK108413.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H04, full insert sequence Length = 1396 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 552 cgtcggcggcgccggcgccg 571
>dbj|AK107180.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H02, full insert sequence Length = 1356 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cggcggcgccggcgccgagc 99 |||||||||||||||||||| Sbjct: 340 cggcggcgccggcgccgagc 321
>dbj|AK073039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150N04, full insert sequence Length = 2298 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ggtgcagccgtcggcggcgc 88 |||||||||||||||||||| Sbjct: 757 ggtgcagccgtcggcggcgc 776
>ref|NM_208667.1| Eremothecium gossypii ACL090Cp (ACL090C), mRNA Length = 1422 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 ggaggcgctggagcagcggctggg 170 ||||| |||||||||||||||||| Sbjct: 360 ggaggagctggagcagcggctggg 383
>dbj|AK069153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J18, full insert sequence Length = 1816 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 962 cgtcggcggcgccggcgccg 943
>emb|BX255931.5| Zebrafish DNA sequence from clone CH211-195B2 in linkage group 22, complete sequence Length = 189327 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctggaggcgctggagcagcg 164 |||||||||||||||||||| Sbjct: 19200 ctggaggcgctggagcagcg 19219
>dbj|AK062468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E04, full insert sequence Length = 594 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 253 cgtcggcggcgccggcgccg 234
>emb|BX088554.8| Zebrafish DNA sequence from clone DKEYP-4F12 in linkage group 20, complete sequence Length = 160766 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctc 541 ||||||||||||| |||||||||| Sbjct: 147055 cttctctctcttttcctttttctc 147078
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence Length = 77605 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 6571 cgtcggcggcgccggcgccg 6552
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 287 cgtcggcggcgccggcgccg 268
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ctctctctttccctttttct 540 |||||||||||||||||||| Sbjct: 18004 ctctctctttccctttttct 17985
>gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.430_E_17, complete sequence Length = 197082 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctctctttccctttttctct 542 |||||||||||||||||||| Sbjct: 146709 ctctctttccctttttctct 146690
>dbj|AP002765.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-634B22, complete sequence Length = 178169 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tcgacatctagacatgcatc 352 |||||||||||||||||||| Sbjct: 30486 tcgacatctagacatgcatc 30467
>dbj|AP000841.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-89J9, complete sequence Length = 103177 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tcgacatctagacatgcatc 352 |||||||||||||||||||| Sbjct: 99290 tcgacatctagacatgcatc 99271
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence Length = 174714 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 catctttctggttcatgttt 368 |||||||||||||||||||| Sbjct: 65947 catctttctggttcatgttt 65966
>gb|BC081948.1| Rattus norvegicus similar to cDNA sequence BC016188, mRNA (cDNA clone MGC:94029 IMAGE:7122187), complete cds Length = 3306 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctggaggcgctggagcagcg 164 |||||||||||||||||||| Sbjct: 1044 ctggaggcgctggagcagcg 1063
>dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1042C11 Length = 200610 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 ||||||||||||| |||||||||| Sbjct: 83413 ttctctctctttctctttttctct 83390
>emb|AL928803.6| Mouse DNA sequence from clone RP23-319N14 on chromosome 2, complete sequence Length = 109092 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ttctctctctttccctttttctct 542 |||||||||||||| ||||||||| Sbjct: 77753 ttctctctctttccttttttctct 77730
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 gcgacggcggcgtcgacctc 247 |||||||||||||||||||| Sbjct: 4351477 gcgacggcggcgtcgacctc 4351496 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ccaccggcgcgacggcggcg 239 |||||||||||||||||||| Sbjct: 3795436 ccaccggcgcgacggcggcg 3795455 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 agccgtcggcggcgccggcgccga 97 ||||||| |||||||||||||||| Sbjct: 1136105 agccgtccgcggcgccggcgccga 1136128
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gctccaccggcgcgacggcg 236 |||||||||||||||||||| Sbjct: 906113 gctccaccggcgcgacggcg 906094
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 23682699 cgtcggcggcgccggcgccg 23682718 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgtcggcggcgccggcgccg 96 |||||||||||||||||||| Sbjct: 2561681 cgtcggcggcgccggcgccg 2561662
>ref|NM_001013869.1| Rattus norvegicus similar to cDNA sequence BC016188 (RGD1306108), mRNA Length = 3306 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctggaggcgctggagcagcg 164 |||||||||||||||||||| Sbjct: 1044 ctggaggcgctggagcagcg 1063
>emb|AL929135.9| Zebrafish DNA sequence from clone CH211-125A22, complete sequence Length = 167531 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctggaggcgctggagcagcg 164 |||||||||||||||||||| Sbjct: 125957 ctggaggcgctggagcagcg 125938
>gb|AC132376.4| Mus musculus BAC clone RP24-80J23 from 1, complete sequence Length = 191858 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tctctttccctttttctctt 543 |||||||||||||||||||| Sbjct: 125832 tctctttccctttttctctt 125851
>gb|AC004391.1|AC004391 Homo sapiens Cosmid g5129s018, complete sequence Length = 38649 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 cttctctctctttccctttttctc 541 ||||||||||||||||||| |||| Sbjct: 27187 cttctctctctttccctttctctc 27210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,342,070 Number of Sequences: 3902068 Number of extensions: 5342070 Number of successful extensions: 153299 Number of sequences better than 10.0: 262 Number of HSP's better than 10.0 without gapping: 275 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147696 Number of HSP's gapped (non-prelim): 5595 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
