Clone Name | basd3i21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NIPM_HUMAN (O43920) NADH-ubiquinone oxidoreductase 15 kDa subuni... | 31 | 1.8 | 2 | TBB1_PORPU (P50259) Tubulin beta-1 chain (Beta-1 tubulin) | 30 | 5.2 | 3 | TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1 | 30 | 5.2 |
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>NIPM_HUMAN (O43920) NADH-ubiquinone oxidoreductase 15 kDa subunit (EC 1.6.5.3)| (EC 1.6.99.3) (Complex I-15 kDa) (CI-15 kDa) Length = 105 Score = 31.2 bits (69), Expect = 1.8 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +1 Query: 28 VDGGEEEEAMASGWGINGNKGRCYDF---WLDFSSCMSRCRQPSDCGLLREDYLECLHHS 198 + GE+ MA GRC+ F W++ + + R +C + +D++ECL Sbjct: 19 IQSGEQPYKMA---------GRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQ 69 Query: 199 KEFQRRNRI 225 K +R I Sbjct: 70 KTMRRAGTI 78
>TBB1_PORPU (P50259) Tubulin beta-1 chain (Beta-1 tubulin)| Length = 457 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +1 Query: 1 ERRKGEAAKVDGGEEEEAMASGWGINGNK 87 E ++ EAA V+G EEE+A A G +NG++ Sbjct: 421 ELQQYEAATVEGEEEEDAYAEGAVVNGDQ 449
>TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1| Length = 767 Score = 29.6 bits (65), Expect = 5.2 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 Query: 137 QRLIHELKSSQKS*HRPLFPLMPHPDAI 54 Q +H+L++ S H P PL PHP ++ Sbjct: 140 QLTVHQLQAQHLSHHAPPIPLTPHPSSL 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,209,499 Number of Sequences: 219361 Number of extensions: 732683 Number of successful extensions: 1754 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1703 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1754 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)