>SNF12_YEAST (P53628) Transcription regulatory protein SNF12 (SWI/SNF complex|
           component SWP73)
          Length = 566

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
 Frame = +3

Query: 327 CVLSLSRKEHPHSPLFEW------VIGYTVGCVATLPLLYWRYLHRNRPTTGQEPASQNF 488
           C +S+ RK  P  P   +      +IG   G         ++Y+H N   T  E A +N 
Sbjct: 293 CTISILRKSSPEEPFMSYSPQLTAIIGLKSGTSHDAIFSIYKYIHLNELLTNDESAFENL 352

Query: 489 PPNSIPESNSHTTSS 533
             N     NS+T++S
Sbjct: 353 MGNR-NNHNSNTSTS 366

>TIS1_DROME (P47980) Protein TIS11 (dTIS11)|
          Length = 436

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 465 QEPASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNN 593
           Q+ +SQNF P S   SN  + SS+   S  G     N ++ NN
Sbjct: 223 QQSSSQNFSPKSNQSSNQSSNSSSSSSSSGGGGGGGNSINNNN 265

>NORB_PSEST (P98008) Nitric-oxide reductase subunit B (EC 1.7.99.7) (Nitric|
           oxide reductase cytochrome b subunit) (NOR large
           subunit)
          Length = 473

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = +3

Query: 270 SCWISIELVVTVSQIIAAICVLSLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHRN 449
           S + ++E +   + ++ A+ +++  R+EHP+     W IG TV   A L    W ++H  
Sbjct: 273 SIFSALEPLPFFAMVLFALNMVNRRRREHPNKAASLWAIGTTV--TAFLGAGVWGFMHTL 330

Query: 450 RPTTGQEPASQ 482
            P       SQ
Sbjct: 331 APVNYYTHGSQ 341

>GRP3_DAUCA (P37705) Glycine-rich protein A3|
          Length = 195

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 453 PTTGQEPASQNFPPNSIPESNSHTTSSAPGMSEAGFV 563
           P  G  PA   +PP   P +  H+ SSAP  S  G V
Sbjct: 65  PPQGYPPAGGGYPPQGYPPAGHHSGSSAPHHSGHGGV 101

>LIME1_MOUSE (Q9EQR5) Lck-interacting transmembrane adapter 1 (Lck-interacting|
           molecule)
          Length = 269

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 408 ATLPLLYWRYLHRNRPTTGQEPASQNFPPNSIPESNSHTTSSAPGMS 548
           A++ LL+ R+L  +R +T  +  +  FPP  +P +     ++AP  S
Sbjct: 86  ASMDLLHPRWLEMSRGSTRSQVPNSAFPPRQLPRAPPAAPATAPSTS 132

>PCSK5_HUMAN (Q92824) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC5)
           (Subtilisin/kexin-like protease PC5) (PC6) (hPC6)
          Length = 913

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 516 NWTQVCCSEGSSDLLVPVQLLGGC 445
           +W   CC  G  DLL  + LLGGC
Sbjct: 2   DWESRCCCPGRLDLLCVLALLGGC 25

>SPO71_YEAST (Q03868) Sporulation-specific protein 71|
          Length = 1245

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +3

Query: 3   IEADSETDNHPLLIDH-MENTAHREIAIDS--PRDDVASSSTARREDNDGLDRLPRISES 173
           I+     D HP+L +   ENT  R  ++ S   R D+  S +  R+D    DR+P  S +
Sbjct: 195 IDTAQAVDIHPVLHEEDQENTNKRNKSLLSNLKRKDLGESKSISRKDYSHFDRIPSPSSA 254

Query: 174 FSETTTASNSQSAP 215
            S   T  N    P
Sbjct: 255 RSVGETDFNYNREP 268

>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)|
          Length = 586

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 471 PASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNNML 599
           P+  + PP+S   S+S ++SSAP        T+ N  S +N L
Sbjct: 479 PSGPSLPPSSSSSSSSSSSSSAPQRPGGPTSTQVNASSSSNSL 521

>HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragment)|
          Length = 405

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
 Frame = +3

Query: 414 LPLLYWRYLHRNRPTTGQEPASQNFPPNSIP--------ESNSHTTSSAPGMSEAGFVT 566
           +P+LY    H N PTTG    S N  P  +P         S++ +TSSA   +    VT
Sbjct: 351 VPILY----HENHPTTGSSLHSPNILPFPMPYPGSYHQISSSTSSTSSARSPTSTSIVT 405

>BUL1_YEAST (P48524) Ubiquitination pathway protein BUL1 (Respiration|
           deficiency suppressor)
          Length = 976

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 438 LHRNRPTTGQEPASQNFPPNSIPESNSHTTSSAPGMS 548
           LHR+ P    +P   +FPP S  E+N+ T + A G S
Sbjct: 140 LHRHIPQGNVDPDRHDFPP-SYQEANNSTATGAAGSS 175

>SYI_CLOTE (Q899C3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1036

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = -3

Query: 524 CVRIGLRYAVRREVLTCWFLSSCWAVAMEIAPVEKRKSSNTTY--GITNDPLKQWRMWMF 351
           C + G      REV+ CWF S     A    P E ++    T+     ++ + Q R W +
Sbjct: 500 CSKCGKEMKRTREVIDCWFDSGSMPFAQHHYPFENKEVFEKTFPAQFISEAVDQTRGWFY 559


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,590,169
Number of Sequences: 219361
Number of extensions: 1545628
Number of successful extensions: 4672
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4665
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)