Clone Information

BLAST Search Result

Clone Name	basd3h23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TAF1_DROME (P51123) Transcription initiation factor TFIID subuni...	70	6e-12
2	TAF1_HUMAN (P21675) Transcription initiation factor TFIID subuni...	69	1e-11
3	TAF1L_HUMAN (Q8IZX4) Transcription initiation factor TFIID 210 k...	68	2e-11
4	SPT7_YEAST (P35177) Transcriptional activator SPT7	64	3e-10
5	BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain ...	63	6e-10
6	BAZ1A_XENLA (Q8UVR5) Bromodomain adjacent to zinc finger domain ...	61	2e-09
7	BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain ...	61	2e-09
8	GCN5_SCHPO (Q9UUK2) Histone acetyltransferase gcn5 (EC 2.3.1.48)	61	3e-09
9	BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain ...	60	4e-09
10	YCK2_SCHPO (Q9Y7N0) Hypothetical bromodomain protein C1450.02	59	1e-08
11	BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like...	58	2e-08
12	BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dep...	58	2e-08
13	GCN5_YEAST (Q03330) Histone acetyltransferase GCN5 (EC 2.3.1.48)	58	2e-08
14	BRD8_MOUSE (Q8R3B7) Bromodomain-containing protein 8	57	3e-08
15	BRD8_HUMAN (Q9H0E9) Bromodomain-containing protein 8 (p120) (Ske...	57	3e-08
16	CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)	57	5e-08
17	GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)	56	9e-08
18	CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)	55	2e-07
19	FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chor...	54	5e-07
20	EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)	53	6e-07
21	BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain ...	53	8e-07
22	BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain ...	52	2e-06
23	SMCA4_HUMAN (P51532) Probable global transcription activator SNF...	52	2e-06
24	GCNL2_HUMAN (Q92830) General control of amino acid synthesis pro...	51	3e-06
25	GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis pro...	51	3e-06
26	GCN5_ASHGO (Q756G9) Histone acetyltransferase GCN5 (EC 2.3.1.48)	51	3e-06
27	SNF21_SCHPO (Q9UTN6) SNF2-family ATP dependent chromatin remodel...	50	4e-06
28	BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2	50	4e-06
29	PB1_HUMAN (Q86U86) Protein polybromo-1 (hPB1) (Polybromo-1D) (BR...	50	4e-06
30	BRD2_HUMAN (P25440) Bromodomain-containing protein 2 (RING3 prot...	50	4e-06
31	BRD7_PONPY (Q5R8B0) Bromodomain-containing protein 7	50	4e-06
32	BRD7_MOUSE (O88665) Bromodomain-containing protein 7 (75 kDa bro...	50	4e-06
33	BRD7_HUMAN (Q9NPI1) Bromodomain-containing protein 7 (75 kDa bro...	50	4e-06
34	PB1_CHICK (Q90941) Protein polybromo-1	50	4e-06
35	YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02	49	9e-06
36	GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)	49	9e-06
37	CBP1_CAEEL (P34545) Protein cbp-1	49	9e-06
38	GCN5_KLULA (Q6CXW4) Histone acetyltransferase GCN5 (EC 2.3.1.48)	49	9e-06
39	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	49	1e-05
40	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	48	2e-05
41	PCAF_HUMAN (Q92831) Histone acetyltransferase PCAF (EC 2.3.1.48)...	47	4e-05
42	STH1_YEAST (P32597) Nuclear protein STH1/NPS1 (EC 3.6.1.-) (ATP-...	47	4e-05
43	BDF1_YEAST (P35817) Protein BDF1	47	6e-05
44	SNF22_SCHPO (O94421) SNF2-family ATP dependent chromatin remodel...	47	6e-05
45	CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2	47	6e-05
46	BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing...	47	6e-05
47	BRD1_SCHPO (Q09948) Bromodomain protein brd1	46	7e-05
48	BRD3_MOUSE (Q8K2F0) Bromodomain-containing protein 3 (Bromodomai...	46	9e-05
49	GCN5_DEBHA (Q6BGW1) Histone acetyltransferase GCN5 (EC 2.3.1.48)	46	9e-05
50	K1240_HUMAN (Q9ULI0) Protein KIAA1240 (Fragment)	46	9e-05
51	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	45	1e-04
52	BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing prote...	45	1e-04
53	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	45	1e-04
54	BRWD1_HUMAN (Q9NSI6) Bromodomain and WD-repeat domain-containing...	45	1e-04
55	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	45	1e-04
56	RSC4_YEAST (Q02206) Chromatin structure remodeling complex prote...	45	2e-04
57	RSC1_YEAST (P53236) Chromatin structure remodeling complex prote...	45	2e-04
58	BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain ...	45	2e-04
59	BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like...	45	2e-04
60	BRD7_CHICK (Q5ZKG2) Bromodomain-containing protein 7	45	2e-04
61	BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain ...	45	2e-04
62	SMCA2_HUMAN (P51531) Probable global transcription activator SNF...	44	3e-04
63	RSC2_YEAST (Q06488) Chromatin structure remodeling complex prote...	43	6e-04
64	TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (...	42	0.001
65	BRPF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-contai...	42	0.001
66	TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (...	42	0.001
67	TBP7_CAEEL (P54816) TAT-binding homolog 7	42	0.002
68	PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) ...	40	0.004
69	TIF1A_HUMAN (O15164) Transcription intermediary factor 1-alpha (...	39	0.009
70	TIF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (...	39	0.012
71	RSC1_SCHPO (O74964) Chromatin structure remodeling complex prote...	38	0.020
72	GTE6_ARATH (Q9FT54) Transcription factor GTE6 (GENERAL TRANSCRIP...	37	0.044
73	SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3....	37	0.057
74	TRI66_MOUSE (Q924W6) Tripartite motif protein 66	37	0.057
75	TRI66_HUMAN (O15016) Tripartite motif protein 66	36	0.075
76	K0220_HUMAN (Q92617) Protein KIAA0220 (Fragment)	33	0.49
77	6PGD_CITDI (P41582) 6-phosphogluconate dehydrogenase, decarboxyl...	33	0.64
78	CD2A2_HUMAN (Q8N726) Cyclin-dependent kinase inhibitor 2A, isofo...	32	1.8
79	AMSA_ERWAM (Q46631) Putative tyrosine-protein kinase amsA (EC 2....	30	5.4
80	GNRR2_HUMAN (Q96P88) Gonadotropin-releasing hormone II receptor ...	30	5.4
81	YS41_CAEEL (Q09370) Hypothetical protein ZK177.1	30	5.4
82	REPB_THIFE (P27186) DNA primase (EC 2.7.7.-) (Replication primase)	30	5.4
83	SF04_MOUSE (Q8CH02) Splicing factor 4	30	7.0
84	SF04_RAT (Q68FU8) Splicing factor 4	30	7.0

>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 230 kDa
            subunit) (TAFII-230) (TAFII250) (TBP-associated factor
            230 kDa) (p230)
          Length = 2129

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
 Frame = +1

Query: 172  KRRTPADM-----TEYAPSAKRRRGGEVE-LSNILEKIVDHLRNQTAISLLFLKPVTKKV 333
            KRR   D+       +  +A RRR   V  LS+ILE I + LR+   +S  FL PV+ K 
Sbjct: 1445 KRRVGGDLHCDYLQRHNKTANRRRTDPVVVLSSILEIIHNELRSMPDVSP-FLFPVSAKK 1503

Query: 334  APDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
             PDYY V+ +PMDL T+R+  R+  Y +R  F  D+ QI DN+ +YN
Sbjct: 1504 VPDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYN 1550



 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +1

Query: 235  EVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYK 414
            +V LS I +K+   ++ Q   S  FLKPV KK   DYY VI+RPMDL TI        Y 
Sbjct: 1594 QVALSFIFDKLHSQIK-QLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYH 1652

Query: 415  NRYEFRNDVAQIADNAHMYN--ETRH 486
            +R E+  D+  IA N   YN  +TR+
Sbjct: 1653 SRAEYLADIELIATNCEQYNGSDTRY 1678

to top

>TAF1_HUMAN (P21675) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 250 kDa
            subunit) (TAF(II)250) (TAFII-250) (TAFII250)
            (TBP-associated factor 250 kDa) (p250) (Cell cycle gene 1
            protein)
          Length = 1872

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 38/90 (42%), Positives = 52/90 (57%)
 Frame = +1

Query: 217  KRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKA 396
            +RR    V LS+ILE I++ +R+    +  F  PV  KV  DYY +I RPMDL T+R+  
Sbjct: 1376 RRRTDPMVTLSSILESIINDMRDLPN-TYPFHTPVNAKVVKDYYKIITRPMDLQTLRENV 1434

Query: 397  RKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
            RK  Y +R EFR  +  I  N+  YN  +H
Sbjct: 1435 RKRLYPSREEFREHLELIVKNSATYNGPKH 1464



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 35/80 (43%), Positives = 42/80 (52%)
 Frame = +1

Query: 235  EVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYK 414
            +V  S IL+ IV         S  F  PV KK  PDYY VI  PMDL TIR    K +Y+
Sbjct: 1504 QVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQ 1563

Query: 415  NRYEFRNDVAQIADNAHMYN 474
            +R  F +DV  I  N+  YN
Sbjct: 1564 SRESFLDDVNLILANSVKYN 1583

to top

>TAF1L_HUMAN (Q8IZX4) Transcription initiation factor TFIID 210 kDa subunit|
            (TBP-associated factor 210 kDa) (TAF(II)210)
            (TBP-associated factor 1-like)
          Length = 1826

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 38/90 (42%), Positives = 51/90 (56%)
 Frame = +1

Query: 217  KRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKA 396
            +RR    V LS+ILE I++ +R+       F  PV  KV  DYY +I RPMDL T+R+  
Sbjct: 1395 RRRTDPMVTLSSILESIINDMRDLPNTHP-FHTPVNAKVVKDYYKIITRPMDLQTLRENV 1453

Query: 397  RKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
            RK  Y +R EFR  +  I  N+  YN  +H
Sbjct: 1454 RKCLYPSREEFREHLELIVKNSATYNGPKH 1483



 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 33/80 (41%), Positives = 42/80 (52%)
 Frame = +1

Query: 235  EVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYK 414
            +V  S IL+ IV         S  F  PV KK  PDYY +I  P+DL TIR    K +Y+
Sbjct: 1523 QVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQ 1582

Query: 415  NRYEFRNDVAQIADNAHMYN 474
            +R  F +DV  I  N+  YN
Sbjct: 1583 SRESFLDDVNLILANSVKYN 1602

to top

>SPT7_YEAST (P35177) Transcriptional activator SPT7|
          Length = 1332

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 33/83 (39%), Positives = 49/83 (59%)
 Frame = +1

Query: 226 RGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKM 405
           R G+ EL    EK+V  LRN T  S  FL  V+K+ AP+Y+ +I++ MDL T+  K +  
Sbjct: 439 RIGQEELYEACEKVVLELRNYTEHSTPFLNKVSKREAPNYHQIIKKSMDLNTVLKKLKSF 498

Query: 406 EYKNRYEFRNDVAQIADNAHMYN 474
           +Y ++ EF +D+  I  N   YN
Sbjct: 499 QYDSKQEFVDDIMLIWKNCLTYN 521

to top

>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A|
            (ATP-utilizing chromatin assembly and remodeling factor
            1) (hACF1) (ATP-dependent chromatin remodelling protein)
            (Williams syndrome transcription factor-related chromatin
            remodeli
          Length = 1556

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +1

Query: 163  RASKRRTPADM-TEYAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAP 339
            R  KR++P          +  R+GG  ELS   + +V+ +R+    S  FLK V+K   P
Sbjct: 1407 RCKKRQSPEPSPVTLGRRSSGRQGGVHELSAFEQLVVELVRHDD--SWPFLKLVSKIQVP 1464

Query: 340  DYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
            DYYD+I++P+ L  IR+K  K EYK   EF +D+  +  N   YN
Sbjct: 1465 DYYDIIKKPIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYN 1509

to top

>BAZ1A_XENLA (Q8UVR5) Bromodomain adjacent to zinc finger domain 1A|
           (ATP-utilizing chromatin assembly and remodely factor 1)
           (xACF1) (Fragment)
          Length = 627

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
 Frame = +1

Query: 172 KRRTPADMTEYAPSAKRRRG---GEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPD 342
           K+R   D++      +R  G   G  ELS   + +V+ +R+    S  F++ V+K   PD
Sbjct: 480 KKRLSGDISSLEQGNRRSSGRHHGVHELSACEQLVVELVRHDD--SWPFMRLVSKNQVPD 537

Query: 343 YYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
           Y+DVIQRP+ L  IR+K  K EYK   EF +DV  +  N   YN
Sbjct: 538 YFDVIQRPIALNLIREKVNKCEYKCASEFIDDVHLMWSNCFEYN 581

to top

>BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain protein 1B|
            (Williams-Beuren syndrome chromosome region 9 protein)
            (WBRS9) (Williams syndrome transcription factor) (hWALP2)
          Length = 1483

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
 Frame = +1

Query: 124  RPYRNDRKVPERDRASKRRTP----ADMTEYAPSAKRR-RGGEVELSN---ILEKIVDHL 279
            R  R   K P   R S+ + P    A++ E     KR  R   +EL     IL KIV + 
Sbjct: 1300 RSGRRPGKKPHSTRRSQPKAPPVDDAEVDELVLQTKRSSRRQSLELQKCEEILHKIVKY- 1358

Query: 280  RNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADN 459
                  S  F +PVT+  A DYYDVI  PMD  T+++K     Y++  EF  D+ Q+  N
Sbjct: 1359 ----RFSWPFREPVTRDEAEDYYDVITHPMDFQTVQNKCSCGSYRSVQEFLTDMKQVFTN 1414

Query: 460  AHMYN 474
            A +YN
Sbjct: 1415 AEVYN 1419

to top

>GCN5_SCHPO (Q9UUK2) Histone acetyltransferase gcn5 (EC 2.3.1.48)|
          Length = 454

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = +1

Query: 253 ILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFR 432
           +LE +   ++N  + S  F++PV+K+  PDYY+VI+ PMDL T+  + R  +Y++  EF 
Sbjct: 351 VLEMLFTEMQNHPS-SWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFI 409

Query: 433 NDVAQIADNAHMYNET 480
            D   I DN   YN++
Sbjct: 410 RDAKYIFDNCRSYNDS 425

to top

>BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain protein 1B|
            (Williams-Beuren syndrome chromosome region 9 protein
            homolog) (WBRS9)
          Length = 1479

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
 Frame = +1

Query: 124  RPYRNDRKVPERDRASKRRTPADMTEYAPSAKR-RRGGEVELS---NILEKIVDHLRNQT 291
            RP R   K     R S+ +   ++ +     KR  R   +EL    +IL K+V +     
Sbjct: 1300 RPGRPPGKKSHPARRSRPKDDPEVDDLVLQTKRISRRQSLELQKCEDILHKLVKY----- 1354

Query: 292  AISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMY 471
              S  F +PVT+  A DYYDVI+ PMD  TI++K     Y++  EF  D+ Q+  NA +Y
Sbjct: 1355 RFSWPFREPVTRDEAEDYYDVIEHPMDFQTIQNKCSCGNYRSVQEFLTDMKQVFANAELY 1414

Query: 472  N 474
            N
Sbjct: 1415 N 1415

to top

>YCK2_SCHPO (Q9Y7N0) Hypothetical bromodomain protein C1450.02|
          Length = 578

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
 Frame = +1

Query: 166 ASKRRTPADMTEYAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVA--P 339
           A K  +PA + E  P  ++        S +L+++  + R   + +  F +PV       P
Sbjct: 234 APKAASPAVLPEGKPRRRKNNSQMRFCSTVLKEL--YKRQYESFAFPFYQPVDPVACDCP 291

Query: 340 DYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRHP 489
           DY+DVI+ PMDL TI+ K  K EY    EF +D+  + +N   YN    P
Sbjct: 292 DYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTP 341



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
 Frame = +1

Query: 139 DRKVPERDRASKRRTPADMTEYAPSAKRRRGGEVE--LSNILEKIVDHLRNQTAISLLFL 312
           D K  E++   K+       E  P+ K+ RG  +          IV  L+ +T  S  F 
Sbjct: 59  DLKQEEKESMPKK-------EPEPTVKKIRGSGMPPPQQKYCLAIVRQLK-RTKNSAPFK 110

Query: 313 KPVT--KKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
            PV   K+  PDY  +++ PMDLGTI  K    EY    EF +D+  +  N  +YN T  
Sbjct: 111 VPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTES 170

Query: 487 P 489
           P
Sbjct: 171 P 171

to top

>BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like protein)|
          Length = 1058

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRY 423
           L+ +L  ++D L+++   + +F +PV+ K  PDY D I+ PMD  T+R +     YKN +
Sbjct: 567 LTVLLRSVLDQLQDKDP-ARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLH 625

Query: 424 EFRNDVAQIADNAHMYN 474
           EF  D   I DN   YN
Sbjct: 626 EFEEDFDLIIDNCMKYN 642

to top

>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent helicase|
            brm) (Protein brahma)
          Length = 1638

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
 Frame = +1

Query: 103  DADILDHRPYRNDRKVPERDRASKRRTPADMTEYAPSAKRR---RGGEVELSNILEKIVD 273
            D    D     +D K   R R +++    D +      +R+   +  + ++  I+  ++ 
Sbjct: 1380 DGAEFDEEEEEDDSKRKRRKRKNRKEESDDDSLILKRRRRQNLDKRSKKQMHKIMSAVIK 1439

Query: 274  HLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIA 453
            H ++   +S  F+K  +++  PDYY++I+RP+D+  I  +    +Y +  E   D  Q+ 
Sbjct: 1440 HNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQLC 1499

Query: 454  DNAHMYNE 477
             NA +YNE
Sbjct: 1500 QNAQIYNE 1507

to top

>GCN5_YEAST (Q03330) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 439

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 30/85 (35%), Positives = 46/85 (54%)
 Frame = +1

Query: 220 RRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKAR 399
           +R   +  + NIL ++ +H     A +  FL+PV K+  PDYYD I+ PMDL T+  K  
Sbjct: 328 KRGPHDAAIQNILTELQNH-----AAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLE 382

Query: 400 KMEYKNRYEFRNDVAQIADNAHMYN 474
             +Y+   +F  D   + +N  MYN
Sbjct: 383 SNKYQKMEDFIYDARLVFNNCRMYN 407

to top

>BRD8_MOUSE (Q8R3B7) Bromodomain-containing protein 8|
          Length = 951

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = +1

Query: 304 LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETR 483
           +FL+PVT  +AP Y+ ++QRPMDL TI+        ++  EF+ D+  +  NA MYN + 
Sbjct: 804 VFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSD 863

Query: 484 H 486
           H
Sbjct: 864 H 864

to top

>BRD8_HUMAN (Q9H0E9) Bromodomain-containing protein 8 (p120) (Skeletal muscle|
           abundant protein) (Thyroid hormone receptor coactivating
           protein 120kDa) (TrCP120)
          Length = 1235

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = +1

Query: 304 LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETR 483
           +FL+PVT  +AP Y+ ++QRPMDL TI+        ++  EF+ D+  +  NA MYN + 
Sbjct: 731 VFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSD 790

Query: 484 H 486
           H
Sbjct: 791 H 791



 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 24/60 (40%), Positives = 38/60 (63%)
 Frame = +1

Query: 307  FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
            FLKPV+++ AP Y DV++RPMDL +++    K   +   +F  D+  +  NA MYN++ H
Sbjct: 1128 FLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYNDSDH 1187

to top

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
 Frame = +1

Query: 22   EARIYSREEELQXXXXXXXXXXXHEFRDADI-LDHRPYRNDRKVPERDRASKRRTPADMT 198
            E R    EE+LQ            E +   + +D +      +V E + +S   T +  T
Sbjct: 1016 EPRSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESSSNGTASQST 1075

Query: 199  EYAPSAKRRRGGEVE-LSNILEKIVDHLRNQTAISLLFLKPVTKKVA--PDYYDVIQRPM 369
              +PS  R++  + E L   L   ++ L  Q   SL F +PV  ++   PDY+D+++ PM
Sbjct: 1076 --SPSQPRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPM 1133

Query: 370  DLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
            DL TI+ K    +Y+  +++ +DV  + +NA +YN
Sbjct: 1134 DLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYN 1168

to top

>GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 546

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 28/77 (36%), Positives = 43/77 (55%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRY 423
           + NIL ++ +H     A +  FL+PV K+  PDYY+ I+ PMDL T+  K    +Y+   
Sbjct: 443 IQNILVELQNH-----AAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKME 497

Query: 424 EFRNDVAQIADNAHMYN 474
           EF  D   + +N  +YN
Sbjct: 498 EFIYDARLVCNNCRLYN 514

to top

>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
 Frame = +1

Query: 22   EARIYSREEELQXXXXXXXXXXXHEFRDADILDHRPYRNDRKVPERDRASKRRTPADMTE 201
            E R    EE+LQ            E + ++ ++    + + KV  ++             
Sbjct: 1017 EPRSEMMEEDLQGSSQVKEETDTTE-QKSEPMEVEEKKPEVKVEAKEEEENSSNDTASQS 1075

Query: 202  YAPSAKRRRGGEVE-LSNILEKIVDHLRNQTAISLLFLKPVTKKVA--PDYYDVIQRPMD 372
             +PS  R++  + E L   L   ++ L  Q   SL F +PV  ++   PDY+D+++ PMD
Sbjct: 1076 TSPSQPRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMD 1135

Query: 373  LGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
            L TI+ K    +Y+  +++ +DV  + +NA +YN
Sbjct: 1136 LSTIKRKLDTGQYQEPWQYVDDVRLMFNNAWLYN 1169

to top

>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane|
           protein)
          Length = 2038

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
 Frame = +1

Query: 307 FLKPVTKKVAP--DYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNET 480
           F KPV  ++    DY+D+I++PMDLGT++ K    EYK+  EF  DV  I  N + YN  
Sbjct: 503 FYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPP 562

Query: 481 RH 486
            H
Sbjct: 563 DH 564



 Score = 40.4 bits (93), Expect = 0.004
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = +1

Query: 307 FLKPVTKKVA--PDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           F +PV  K    PDY+ +I++PMD+GTI+ +     Y +  E   D   + +N ++YN+
Sbjct: 59  FQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNK 117

to top

>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
 Frame = +1

Query: 145  KVPERDRASKRRTPADMTEYAPS-AKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPV 321
            K   ++   +  T A  +  AP  +K++     EL   L   ++ L  Q   SL F +PV
Sbjct: 1020 KTEIKEEEDQPSTSATQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPV 1079

Query: 322  TKKVA--PDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
              ++   PDY+D+++ PMDL TI+ K    +Y+  +++ +D+  + +NA +YN
Sbjct: 1080 DPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYN 1132

to top

>BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B (Extracellular|
            matrix protein F22)
          Length = 2130

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 26/57 (45%), Positives = 32/57 (56%)
 Frame = +1

Query: 307  FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
            FL PV  K+ P Y  VI++PMD  TIRDK    +Y N   F  DV  + DN   +NE
Sbjct: 2047 FLLPVNLKLVPGYKKVIKKPMDFSTIRDKLTSGQYPNVEAFSLDVRLVFDNCETFNE 2103

to top

>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)|
          Length = 1972

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 25/57 (43%), Positives = 32/57 (56%)
 Frame = +1

Query: 307  FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
            FL PV  K+ P Y  VI++PMD  TIR+K    +Y N   F  DV  + DN   +NE
Sbjct: 1889 FLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNE 1945

to top

>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC 3.6.1.-)|
            (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1
            protein) (Mitotic growth and transcription activator)
            (Brahma protein homolog 1) (SWI/SNF-related
            matrix-associated actin
          Length = 1647

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
 Frame = +1

Query: 100  RDADILDHRPYRNDRKVPERDRASKRRTPADMTEYAPSAKRRRGGEVELSNILEKIVDHL 279
            RD+D     P  + R   + D + K++         P A++       L+  ++KIVD +
Sbjct: 1415 RDSDAGSSTPTTSTRSRDKDDESKKQKKRG-----RPPAEKLSPNPPNLTKKMKKIVDAV 1469

Query: 280  ------RNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDV 441
                   +   +S +F++  ++K  P+YY++I++P+D   I+++ R  +Y++  +   DV
Sbjct: 1470 IKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDV 1529

Query: 442  AQIADNAHMYN 474
              +  NA  +N
Sbjct: 1530 MLLCQNAQTFN 1540

to top

>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2|
           (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5)
           (STAF97)
          Length = 837

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 42/77 (54%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRY 423
           L N+L +I  H       +  F++PV K  APDYY+VI+ P+DL T+ ++ R   Y  R 
Sbjct: 737 LKNLLAQIKSH-----PSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRK 791

Query: 424 EFRNDVAQIADNAHMYN 474
            F  D+ ++  N   YN
Sbjct: 792 LFVADLQRVIANCREYN 808

to top

>GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis protein 5-like 2|
           (EC 2.3.1.48) (Histone acetyltransferase GCN5) (mmGCN5)
          Length = 830

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 42/77 (54%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRY 423
           L N+L +I  H       +  F++PV K  APDYY+VI+ P+DL T+ ++ R   Y  R 
Sbjct: 730 LKNLLAQIKSH-----PSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRK 784

Query: 424 EFRNDVAQIADNAHMYN 474
            F  D+ ++  N   YN
Sbjct: 785 LFVADLQRVIANCREYN 801

to top

>GCN5_ASHGO (Q756G9) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 452

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 26/77 (33%), Positives = 40/77 (51%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRY 423
           + N+L ++ +H     A +  FL+PV +   PDYY+ I+ PMDL T+  K     Y+   
Sbjct: 349 MQNVLTELQNH-----AAAWPFLQPVNRDEVPDYYEFIKEPMDLSTMEIKLENNRYEKME 403

Query: 424 EFRNDVAQIADNAHMYN 474
           +F  D   I +N   YN
Sbjct: 404 DFIYDARLIFNNCRAYN 420

to top

>SNF21_SCHPO (Q9UTN6) SNF2-family ATP dependent chromatin remodeling factor snf21|
            (EC 3.6.1.-) (ATP-dependent helicase snf21)
          Length = 1199

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
 Frame = +1

Query: 124  RPYRNDRKVPE------RDRASKRRTPADMTEYAPSAKRRRGGEVELSNILEKIVDHLRN 285
            RP RN   V E        +  K+R PA  T  +      R   +E+   + ++ D   N
Sbjct: 1027 RPKRNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIYKAVNELEDD--N 1084

Query: 286  QTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAH 465
               ++ LFL+  +KK+ PDYY +I+ P+ L  IR       YK     ++D+  + +NA 
Sbjct: 1085 GRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNAR 1144

Query: 466  MYNE 477
             YNE
Sbjct: 1145 TYNE 1148

to top

>BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2|
          Length = 803

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
 Frame = +1

Query: 172 KRRTPADMTEYAPSAKRRRGGEVELSN-ILEKIVDHLRNQTAISLLFLKPVTKKVAP--D 342
           ++  P    ++  S K +   +++  N IL++++   +   A +  F KPV        D
Sbjct: 328 RKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLS--KKHAAYAWPFYKPVDASALGLHD 385

Query: 343 YYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
           Y+D+I+ PMDL T++ K    +Y++  EF  DV  +  N + YN   H
Sbjct: 386 YHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDH 433



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = +1

Query: 181 TPADMTEYAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPV--TKKVAPDYYDV 354
           TPA+      S  ++ G        L K+V     +   +  F +PV   K   PDY+ +
Sbjct: 57  TPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKI 116

Query: 355 IQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           I++PMD+GTI+ +     Y    E   D   +  N ++YN+
Sbjct: 117 IKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNK 157

to top

>PB1_HUMAN (Q86U86) Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated|
           factor 180) (BAF180)
          Length = 1689

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQT-----AISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKME 408
           L  ILE++++ +   T      IS LF K  +K   PDYY +I+ P+DL TI  + +   
Sbjct: 182 LKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGS 241

Query: 409 YKNRYEFRNDVAQIADNAHMYNE 477
           YK+ +    D+  +A NA  YNE
Sbjct: 242 YKSIHAMAKDIDLLAKNAKTYNE 264



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
 Frame = +1

Query: 136  NDRKVPERDRASKRRT----PADMTEYAPSAKRRRGGEVE---------LSNILEKIVDH 276
            ND  + E+    KR+     P D    +P  K  R   +          +   L ++ + 
Sbjct: 609  NDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEA 668

Query: 277  LRNQT-----AISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDV 441
            ++N T      +S +FL+  ++   PDYY  I++PMD+  IR      +Y++      D 
Sbjct: 669  VKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDF 728

Query: 442  AQIADNAHMYNE 477
              + +NA  YNE
Sbjct: 729  VMMFNNACTYNE 740



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/58 (37%), Positives = 28/58 (48%)
 Frame = +1

Query: 304 LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           LF+   +KK  PDYY +I  PMDL  I    R  +Y        D+  +  NA  YNE
Sbjct: 545 LFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE 602



 Score = 40.4 bits (93), Expect = 0.004
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
 Frame = +1

Query: 208 PSAKRRRGGEV----------ELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVI 357
           PS KRRR   +          EL N +    D       +  LF++   ++  PDYY+V+
Sbjct: 31  PSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDE--QGRLLCELFIRAPKRRNQPDYYEVV 88

Query: 358 QRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRHP 489
            +P+DL  I+ K +  EY +      D   + +NA  Y +   P
Sbjct: 89  SQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSP 132



 Score = 39.3 bits (90), Expect = 0.009
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
 Frame = +1

Query: 238 VELSNILEKIVDHLR----NQ-TAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARK 402
           +++SN   ++ D +R    NQ   I+  F    +KK  PDYY  I+ P+ L  IR K + 
Sbjct: 380 MDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKN 439

Query: 403 MEYKNRYEFRNDVAQIADNAHMYN 474
            EY+       D+  + +NA  YN
Sbjct: 440 QEYETLDHLECDLNLMFENAKRYN 463

to top

>BRD2_HUMAN (P25440) Bromodomain-containing protein 2 (RING3 protein) (O27.1.1)|
          Length = 801

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
 Frame = +1

Query: 172 KRRTPADMTEYAPSAKRRRGGEVELSN-ILEKIVDHLRNQTAISLLFLKPVTKKVAP--D 342
           ++  P    ++  S K +   +++  N IL++++   +   A +  F KPV        D
Sbjct: 328 RKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLS--KKHAAYAWPFYKPVDASALGLHD 385

Query: 343 YYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
           Y+D+I+ PMDL T++ K    +Y++  EF  DV  +  N + YN   H
Sbjct: 386 YHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDH 433



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = +1

Query: 181 TPADMTEYAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPV--TKKVAPDYYDV 354
           TPA+      S  ++ G        L K+V     +   +  F +PV   K   PDY+ +
Sbjct: 57  TPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKI 116

Query: 355 IQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           I++PMD+GTI+ +     Y    E   D   +  N ++YN+
Sbjct: 117 IKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNK 157

to top

>BRD7_PONPY (Q5R8B0) Bromodomain-containing protein 7|
          Length = 651

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
 Frame = +1

Query: 124 RPYRNDRKVPERDRASKRRTPADMTEYAPS--------------AKRRRGGEVELSNILE 261
           R  + D+K  +RDR  +     D+  +AP               AK+    +  L   L 
Sbjct: 83  RRVKEDKKKRDRDRV-ENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQTPLQEALN 141

Query: 262 KIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDV 441
           +++  L+ +   S  F  PVT  +AP Y  +I+ PMD  T+++K +  +Y++  E +++ 
Sbjct: 142 QLMRQLQRKDP-SAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNF 200

Query: 442 AQIADNAHMYNE 477
             +  NA +YN+
Sbjct: 201 KLMCTNAMIYNK 212

to top

>BRD7_MOUSE (O88665) Bromodomain-containing protein 7 (75 kDa bromodomain|
           protein)
          Length = 651

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
 Frame = +1

Query: 124 RPYRNDRKVPERDRASKR-------------RTPADMTEYAPSAKRRRGGEVELSNILEK 264
           R  + D+K  +RDRA                  P +    +  AK+    +  L   L +
Sbjct: 83  RRVKEDKKKRDRDRAENEVDRDLQCHVPIRLDLPPEKPLTSSLAKQEEVEQTPLQEALNQ 142

Query: 265 IVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVA 444
           ++  L+ +   S  F  PVT  +AP Y  +I+ PMD  T+++K +  +Y++  E +++  
Sbjct: 143 LMRQLQRKDP-SAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFK 201

Query: 445 QIADNAHMYNE 477
            +  NA +YN+
Sbjct: 202 LMCTNAMIYNK 212

to top

>BRD7_HUMAN (Q9NPI1) Bromodomain-containing protein 7 (75 kDa bromodomain|
           protein) (Protein CELTIX-1)
          Length = 651

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
 Frame = +1

Query: 124 RPYRNDRKVPERDRASKRRTPADMTEYAPS--------------AKRRRGGEVELSNILE 261
           R  + D+K  +RDR  +     D+  +AP               AK+    +  L   L 
Sbjct: 83  RRVKEDKKKRDRDRV-ENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQTPLQEALN 141

Query: 262 KIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDV 441
           +++  L+ +   S  F  PVT  +AP Y  +I+ PMD  T+++K +  +Y++  E +++ 
Sbjct: 142 QLMRQLQRKDP-SAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNF 200

Query: 442 AQIADNAHMYNE 477
             +  NA +YN+
Sbjct: 201 KLMCTNAMIYNK 212

to top

>PB1_CHICK (Q90941) Protein polybromo-1|
          Length = 1633

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQT-----AISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKME 408
           L  ILE++++ +   T      IS LF K  +K   PDYY +I+ P+DL TI  + +   
Sbjct: 179 LKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGT 238

Query: 409 YKNRYEFRNDVAQIADNAHMYNE 477
           YK+ +    D+  +A NA  YNE
Sbjct: 239 YKSIHAMAKDIDLLAKNAKTYNE 261



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
 Frame = +1

Query: 238 VELSNILEKIVDHLR----NQ-TAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARK 402
           ++ SN L ++ D +R    NQ   IS  F +  +KK  PDYY  I+ P+ L  IR K + 
Sbjct: 378 MDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKN 437

Query: 403 MEYKNRYEFRNDVAQIADNAHMYN 474
            EY+   +   D+  + +NA  YN
Sbjct: 438 HEYETLDQLEADLNLMFENAKRYN 461



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
 Frame = +1

Query: 136  NDRKVPERDRASKRRT----PADMTEYAPSAKRRRGGEVE---------LSNILEKIVDH 276
            ND  + E+    KR+     P D    +P  K  R   +          +   L ++ + 
Sbjct: 607  NDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEA 666

Query: 277  LRNQT-----AISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDV 441
            ++N T      +S +FL+  ++   PDYY  I++P+D+  IR      +Y++      D 
Sbjct: 667  VKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDF 726

Query: 442  AQIADNAHMYNE 477
              + +NA  YNE
Sbjct: 727  VMMFNNACTYNE 738



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/58 (37%), Positives = 29/58 (50%)
 Frame = +1

Query: 304 LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           LF+   +KK  PDYY +I  PMDL  I    R  +Y       +D+  +  NA  YNE
Sbjct: 543 LFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNE 600



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
 Frame = +1

Query: 208 PSAKRRRGGEV----------ELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVI 357
           PS KRRR   +          EL N +    D       +  LF++   ++  PDYY+V+
Sbjct: 32  PSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDE--QGRLLCELFIRAPKRRNQPDYYEVV 89

Query: 358 QRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRHP 489
            +P+DL  I+ K +  EY +      D   + +NA  Y +   P
Sbjct: 90  SQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSP 133

to top

>YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02|
          Length = 727

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
 Frame = +1

Query: 124 RPYRNDRKVPERDRASKRRTPADMTEYAPSAKR---------RRGGEVELSNILEKIVDH 276
           RP R  R +      ++ R  A M   + S  R         RR    E+      + + 
Sbjct: 345 RPGRRPRSMTAPKGGARTRRQAAMYSNSSSGIRETMYDLKPHRRKDAAEMKFCQSVLKEL 404

Query: 277 LRNQ-TAISLLFLKPVTKKVA--PDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQ 447
           L+ Q  A +  F KPV       PDY+ VI+ PMDLGT+++K    EY +   F  D+  
Sbjct: 405 LKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVL 464

Query: 448 IADNAHMYNETRHP 489
           +  N + +N    P
Sbjct: 465 MFKNCYKFNSAGTP 478



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +1

Query: 298 SLLFLKPV--TKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMY 471
           S+ F  PV   K+  PDY  +I+ P+DLGT++ K     Y +   F +D+  +  N  +Y
Sbjct: 251 SIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLY 310

Query: 472 NETRHP 489
           N T  P
Sbjct: 311 NGTESP 316

to top

>GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 464

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 24/74 (32%), Positives = 39/74 (52%)
 Frame = +1

Query: 253 ILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFR 432
           +++ ++  L+N  A +  F + V +   PDYY+VI+ PMDL T+  +     YK   EF 
Sbjct: 360 VMQHVLSELQNH-ASAWPFAQAVNRDEVPDYYEVIKEPMDLSTMEQRLEADSYKTMEEFV 418

Query: 433 NDVAQIADNAHMYN 474
            D   + +N   YN
Sbjct: 419 YDARLVFNNCRAYN 432

to top

>CBP1_CAEEL (P34545) Protein cbp-1|
          Length = 2056

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = +1

Query: 307  FLKPVTKKVA--PDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
            F  PV  K+   PDY+++I+RPMDL T+  K    +Y+N  +F +D+  + DNA +YN
Sbjct: 889  FRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYN 946

to top

>GCN5_KLULA (Q6CXW4) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 516

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 26/77 (33%), Positives = 40/77 (51%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRY 423
           + N+L ++ +H     A +  FL+PV K+  PDYY+ I+ PMDL ++  K     Y+   
Sbjct: 413 MQNLLTELQNH-----AAAWPFLQPVNKEEVPDYYEFIKEPMDLSSMEMKLNGNRYEKME 467

Query: 424 EFRNDVAQIADNAHMYN 474
            F  D   I +N   YN
Sbjct: 468 NFIYDARLIFNNCRAYN 484

to top

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
 Frame = +1

Query: 172 KRRTPADMTEYAPSAKRRRGGEVEL-SNILEKIVDHLRNQTAISLLFLKPVTKKVAP--D 342
           K+  P      AP    +   +++  S IL+++    +   A +  F KPV  +     D
Sbjct: 332 KKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMF--AKKHAAYAWPFYKPVDVEALGLHD 389

Query: 343 YYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
           Y D+I+ PMD+ TI+ K    EY++  EF  DV  +  N + YN   H
Sbjct: 390 YCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDH 437



 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 307 FLKPV--TKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           F +PV   K   PDYY +I+ PMD+GTI+ +     Y N  E   D   +  N ++YN+
Sbjct: 83  FQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK 141

to top

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +1

Query: 280 RNQTAISLLFLKPVTKKVAP--DYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIA 453
           +   A +  F KPV  +     DY D+I+ PMD+ TI+ K    EY++  EF  DV  + 
Sbjct: 368 KKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMF 427

Query: 454 DNAHMYNETRH 486
            N + YN   H
Sbjct: 428 SNCYKYNPPDH 438



 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 307 FLKPV--TKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           F +PV   K   PDYY +I+ PMD+GTI+ +     Y N  E   D   +  N ++YN+
Sbjct: 83  FQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNK 141

to top

>PCAF_HUMAN (Q92831) Histone acetyltransferase PCAF (EC 2.3.1.48)|
           (P300/CBP-associated factor) (P/CAF) (Histone acetylase
           PCAF)
          Length = 832

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 26/77 (33%), Positives = 45/77 (58%)
 Frame = +1

Query: 244 LSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRY 423
           L +IL+++  H   Q+A    F++PV +  AP YY+VI+ PMDL T+ ++ +   Y ++ 
Sbjct: 732 LKSILQQVKSH---QSAWP--FMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKK 786

Query: 424 EFRNDVAQIADNAHMYN 474
            F  D+ ++  N   YN
Sbjct: 787 LFMADLQRVFTNCKEYN 803

to top

>STH1_YEAST (P32597) Nuclear protein STH1/NPS1 (EC 3.6.1.-) (ATP-dependent|
            helicase STH1) (Chromatin structure remodeling complex
            protein STH1) (SNF2 homolog)
          Length = 1359

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
 Frame = +1

Query: 136  NDRKVPERDRASKRRTPADMTEYAPSAKRRRGGEVELSNILEKIVDHLRNQT------AI 297
            ND K  E    SK  +PA  T  A    + +   + +   +EK+V+ +R Q         
Sbjct: 1219 NDGKRAEEKPESK--SPAKKT--AAKKTKTKSKSLGIFPTVEKLVEEMREQLDEVDSHPR 1274

Query: 298  SLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
            + +F K  +K+  PDY+ VI++PM +  I    +   YK   E R  +  + +NA  YNE
Sbjct: 1275 TSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFENARFYNE 1334

to top

>BDF1_YEAST (P35817) Protein BDF1|
          Length = 686

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
 Frame = +1

Query: 208 PSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPV--TKKVAPDYYDVIQRPMDLGT 381
           P +KR +       ++L++++   +   + +  FL+PV       P Y+D ++ PMDLGT
Sbjct: 309 PKSKRLQQAMKFCQSVLKELM--AKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGT 366

Query: 382 IRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
           I  K    +Y+   +F  DV  +  N + +N
Sbjct: 367 IAKKLNDWQYQTMEDFERDVRLVFKNCYTFN 397



 Score = 33.9 bits (76), Expect = 0.37
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 307 FLKPV--TKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
           FL+PV   K   P Y++ I+RPMDL TI  K     Y+   +   D   + +N+  +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFN 230

to top

>SNF22_SCHPO (O94421) SNF2-family ATP dependent chromatin remodeling factor snf22|
            (EC 3.6.1.-) (ATP-dependent helicase snf22)
          Length = 1680

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = +1

Query: 163  RASKRRTPADMTEYAPSAKRRRGGEVELSNILEKIVDHLRNQTA--ISLLFLKPVTKKVA 336
            R+ ++ TP+    Y   A RR   E     I E++ + L+++    ++ LFL P  +K+ 
Sbjct: 1504 RSGRKNTPS----YKQKALRRYCME-----IFERLYN-LQSEDGRFVNGLFLYPPNRKLY 1553

Query: 337  PDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
            PDYY +I+RP+ LG I+   +   Y +  E   D   + +NA+ YNE
Sbjct: 1554 PDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYNE 1600

to top

>CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2|
          Length = 1484

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = +1

Query: 307 FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
           FL+PV +  AP+YY +I+ PMD+ ++  K     Y  + EF ND+  +  N   YN
Sbjct: 459 FLEPVDESYAPNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKYN 514

to top

>BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing protein 1|
            (WD-repeat protein 9)
          Length = 2304

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +1

Query: 307  FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
            F +PV     PDY D+I  PMD GT+R+      Y +  EF  D+  I  NA  Y   + 
Sbjct: 1340 FRQPVDLDEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKR 1399

Query: 487  PHI 495
              I
Sbjct: 1400 SKI 1402



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/85 (31%), Positives = 36/85 (42%)
 Frame = +1

Query: 223  RRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARK 402
            +R  + E   I+  I D L N   I+  F  PV     P Y  V+  P DL TIR +   
Sbjct: 1160 QRSRDEECDRIISGI-DQLLNLD-IAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVN 1217

Query: 403  MEYKNRYEFRNDVAQIADNAHMYNE 477
              Y+       +V  I  NA  +NE
Sbjct: 1218 RFYRRLSALIWEVRYIEHNARTFNE 1242

to top

>BRD1_SCHPO (Q09948) Bromodomain protein brd1|
          Length = 542

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
 Frame = +1

Query: 235 EVELSNILEKIVDHLRNQTAISLLFLKPV-----TKKVAPDYYDVIQRPMDLGTIRDKAR 399
           E+++  +++ I+D L  +      FL  +     +K++ PDYY++I+ PM +  +  + +
Sbjct: 141 EIDVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFK 200

Query: 400 KMEYKNRYEFRNDVAQIADNAHMYN 474
           K EY     F  D+ Q+  NA  YN
Sbjct: 201 KGEYTTLESFVKDLNQMFINAKTYN 225



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +1

Query: 235 EVELSNILEKIVDHLRNQ-TAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEY 411
           + +   +LE +V    N+      +F +  +K+  PDYY +IQ+P+    +R+KA+  +Y
Sbjct: 12  KTKFDEVLEALVGLKDNEGNPFDDIFEELPSKRYFPDYYQIIQKPICYKMMRNKAKTGKY 71

Query: 412 KNRYEFRNDVAQIADNAHMYN 474
            +  +F +D+  +  NA  YN
Sbjct: 72  LSMGDFYDDIRLMVSNAQTYN 92

to top

>BRD3_MOUSE (Q8K2F0) Bromodomain-containing protein 3 (Bromodomain-containing|
           FSH-like protein FSRG2)
          Length = 726

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
 Frame = +1

Query: 208 PSAKRRRGGEV-ELSNILEKIVDHLRN------------QTAISLLFLKPVTKKVAP--D 342
           P  K    GEV + +    K+ +HLR+              A +  F KPV  +     D
Sbjct: 287 PPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHD 346

Query: 343 YYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
           Y+D+I+ PMDL T++ K    EY +   F  D+  +  N + YN   H
Sbjct: 347 YHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDH 394



 Score = 39.7 bits (91), Expect = 0.007
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 307 FLKPVT--KKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           F +PV   K   PDY+ +I+ PMD+GTI+ +     Y +  E   D   +  N ++YN+
Sbjct: 58  FYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK 116

to top

>GCN5_DEBHA (Q6BGW1) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 455

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 26/75 (34%), Positives = 38/75 (50%)
 Frame = +1

Query: 250 NILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEF 429
           N +  ++  L N  + +  F  PV K+   DYYDVI+ PMDL T+  K    +Y +  +F
Sbjct: 349 NFMVTLLSELTNHPS-AWPFSTPVNKEEVGDYYDVIKEPMDLSTMELKLENDKYDSFDQF 407

Query: 430 RNDVAQIADNAHMYN 474
             D   I +N   YN
Sbjct: 408 LYDARLIFNNCRSYN 422

to top

>K1240_HUMAN (Q9ULI0) Protein KIAA1240 (Fragment)|
          Length = 733

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
 Frame = +1

Query: 304 LFLKPVTKKVAPD------------YYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQ 447
           LFL+ VTK++A D            Y +VI+ PMDL T+  K  K  Y    +F  D+  
Sbjct: 245 LFLRDVTKRLATDKRFNIFSKPVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDL 304

Query: 448 IADNAHMYNETRHP 489
           I  NA  YN  + P
Sbjct: 305 ICSNALEYNPDKDP 318

to top

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +1

Query: 304  LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETR 483
            +F KPV     PDY  VI++PMDL ++  K    +Y    ++  D+  I  NA  YN  R
Sbjct: 839  VFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYNPDR 898

Query: 484  HP 489
             P
Sbjct: 899  DP 900

to top

>BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing protein 3|
          Length = 1205

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = +1

Query: 235 EVELS--NILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKME 408
           E+EL   N+L +    L  +   + +F +PV     PDY + I +PMD  T+R K     
Sbjct: 588 ELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHL 647

Query: 409 YKNRYEFRNDVAQIADNAHMYN 474
           Y+   EF  D   I  N   YN
Sbjct: 648 YRTLEEFEEDFNLIVTNCMKYN 669

to top

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +1

Query: 304 LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETR 483
           +F KPV     PDY  VI++PMDL ++  K    +Y    ++  D+  I  NA  YN  R
Sbjct: 657 VFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDLICSNALEYNPDR 716

Query: 484 HP 489
            P
Sbjct: 717 DP 718

to top

>BRWD1_HUMAN (Q9NSI6) Bromodomain and WD-repeat domain-containing protein 1|
            (WD-repeat protein 9)
          Length = 2320

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +1

Query: 307  FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
            F +PV     PDY D+I  PMD GT+R+      Y +  EF  D+  I  NA  Y   + 
Sbjct: 1338 FRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKR 1397

Query: 487  PHI 495
              I
Sbjct: 1398 SKI 1400



 Score = 32.7 bits (73), Expect = 0.83
 Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
 Frame = +1

Query: 118  DHRPYRNDRKVPERDRASKRRTPADMTE--YAPSAKR--RRGGEVELSNILEKIVDHLRN 285
            D  P  ++   PE   AS   T  ++ +  Y P A    ++  + E   I+  I D L N
Sbjct: 1120 DMEPIPDNVDPPEELGASISVTTDELEKLLYKPQAGEWGQKSRDEECDRIISGI-DQLLN 1178

Query: 286  QTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAH 465
               I+  F  PV     P Y  V+  P DL TIR +     Y+       +V  I  NA 
Sbjct: 1179 LD-IAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNAR 1237

Query: 466  MYNE 477
             +NE
Sbjct: 1238 TFNE 1241

to top

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +1

Query: 304  LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETR 483
            +F KPV     PDY  VI++PMDL ++  K    +Y    ++  D+  I  NA  YN  R
Sbjct: 1008 VFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYNPDR 1067

Query: 484  HP 489
             P
Sbjct: 1068 DP 1069

to top

>RSC4_YEAST (Q02206) Chromatin structure remodeling complex protein RSC4|
           (Remodel the structure of chromatin complex subunit 4)
          Length = 625

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 19/68 (27%), Positives = 38/68 (55%)
 Frame = +1

Query: 274 HLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIA 453
           +L ++  +S  F++ V K   P+YY+++  PM L  ++      +Y   Y+F  D+  + 
Sbjct: 202 NLDDKVKLSEPFMELVDKDELPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVF 261

Query: 454 DNAHMYNE 477
            NAH++N+
Sbjct: 262 QNAHIFND 269



 Score = 36.2 bits (82), Expect = 0.075
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 307 FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKN-RYEFRNDVAQIADNAHMYNE 477
           F+K  ++K  P YY  IQ+PM +  I  K+R  EY++    F  DV  +  N   YNE
Sbjct: 80  FIKLPSRKFHPQYYYKIQQPMSINEI--KSRDYEYEDGPSNFLLDVELLTKNCQAYNE 135

to top

>RSC1_YEAST (P53236) Chromatin structure remodeling complex protein RSC1|
           (Remodel the structure of chromatin complex subunit 1)
          Length = 928

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +1

Query: 268 VDHLRNQTAISL--LFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDV 441
           V HL+++  I +  +F     KK  PDYY +I+ P+ L T+  K R   Y +  +F ND 
Sbjct: 20  VFHLKDENGIEIYPIFNVLPPKKEYPDYYIIIRNPISLNTL--KKRLPHYTSPQDFVNDF 77

Query: 442 AQIADNAHMYN 474
           AQI  NA  YN
Sbjct: 78  AQIPWNAMTYN 88



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
 Frame = +1

Query: 187 ADMTEYAPSAKRRRGGE--------VELSNILEKIVDHL-RNQTAISLLFLKPVTKKVAP 339
           A++T   P    RRG          + + NIL+ +   + +N   ++L F K   +   P
Sbjct: 214 ANITSAHPKTHVRRGRPPVIDLPYVLRIKNILKMMRREVDQNNKTLTLCFEKLPDRNEEP 273

Query: 340 DYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMY 471
            YY VI  P+ L  IR K +  +Y+N + F  D   +  N  +Y
Sbjct: 274 TYYSVITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTNFKLY 317

to top

>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = +1

Query: 142  RKVPERDRASKRRTPADMTE-YAPSAKRRRGGEVELSNIL--EKIVDHLRNQTAISLLFL 312
            R+V  R R S    P    E  +PS +RR       S++   E I+  + +  A +  FL
Sbjct: 1734 RRVLLRGRESPAAGPRYSEEGLSPSKRRRLSMRNHHSDLTFCEIILMEMESHDA-AWPFL 1792

Query: 313  KPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
            +PV  ++   Y  +I+ PMD  T+R++  +  Y +  EF  D   + DN   +NE
Sbjct: 1793 EPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNE 1847

to top

>BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like protein)|
          Length = 726

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 280 RNQTAISLLFLKPVTKKVAP--DYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIA 453
           +   A +  F KPV  +     DY+D+I+ PMDL T++ K    EY +   F  DV  + 
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384

Query: 454 DNAHMYNETRH 486
            N + YN   H
Sbjct: 385 SNCYKYNPPDH 395



 Score = 39.7 bits (91), Expect = 0.007
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 307 FLKPVT--KKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           F +PV   K   PDY+ +I+ PMD+GTI+ +     Y +  E   D   +  N ++YN+
Sbjct: 59  FYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNK 117

to top

>BRD7_CHICK (Q5ZKG2) Bromodomain-containing protein 7|
          Length = 651

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
 Frame = +1

Query: 133 RNDRKVPERDRASKRR--TPADMTEYAPS-------AKRRRGGEVELSNILEKIVDHLRN 285
           + DR+ P+ +   + R  TP  + E +P        +K+    +  L   L +++  L+ 
Sbjct: 91  KRDREHPDSEGEQELRCQTPIRL-ELSPEKPLTSSLSKQEEVEQTPLQEALNQLMRQLQR 149

Query: 286 QTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAH 465
           +   S  F  PVT  +AP Y  +I+ PMD  T+++K +   Y++  E +++   +  NA 
Sbjct: 150 KDPSSF-FSFPVTDFIAPGYSMIIKNPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAM 208

Query: 466 MYNE 477
            YN+
Sbjct: 209 TYNK 212

to top

>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5)
          Length = 1850

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
 Frame = +1

Query: 157  RDRASKRRTPADMTEYAPSAKRRRGGEVELSNIL--EKIVDHLRNQTAISLLFLKPVTKK 330
            RD  +  R P D    +P  +RR       S++   E I+  + +  A +  FL+PV  +
Sbjct: 1714 RDSPAVPRYPED--GLSPPKRRRHSMRSHHSDLTFCEIILMEMESHDA-AWPFLEPVNPR 1770

Query: 331  VAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
            +   Y  VI+ PMD  T+R++  +  Y +  EF  D   + DN   +NE
Sbjct: 1771 LVSGYRRVIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNE 1819

to top

>SMCA2_HUMAN (P51531) Probable global transcription activator SNF2L2 (EC 3.6.1.-)|
            (ATP-dependent helicase SMARCA2) (SNF2-alpha)
            (SWI/SNF-related matrix associated actin dependent
            regulator of chromatin subfamily A member 2) (hBRM)
          Length = 1586

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 17/60 (28%), Positives = 38/60 (63%)
 Frame = +1

Query: 295  ISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
            +S +F++  ++K  P+YY++I++P+D   I+++ R  +Y++  +   DV  +  NA  +N
Sbjct: 1419 LSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFN 1478

to top

>RSC2_YEAST (Q06488) Chromatin structure remodeling complex protein RSC2|
           (Remodel the structure of chromatin complex subunit 2)
          Length = 889

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/60 (43%), Positives = 32/60 (53%)
 Frame = +1

Query: 295 ISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
           IS +F     KK  PDYY VI+ P+   T+  K R   Y +  +F NDV QI  NA  YN
Sbjct: 39  ISPIFNVLPPKKDYPDYYAVIKNPVSFNTL--KKRIPHYTDAQQFMNDVVQIPWNAKTYN 96



 Score = 30.0 bits (66), Expect = 5.4
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
 Frame = +1

Query: 124 RPYRNDRKV-PERDRASKRRTPADMTEYAPSAKRRRGGEVELSNI--LEKIVDHLRNQTA 294
           +P R++R   P      +   P          KR R   ++L  I  ++ ++  L+ +  
Sbjct: 234 KPLRDNRSTTPSHSGTPQPLGPRHRQVSRTQVKRGRPPIIDLPYIQRMKNVMKVLKKEVL 293

Query: 295 ISLLFLKPVTKKVAPD------YYDVIQRPMDLGTIRDKARKMEYKNRYEFRND 438
            S + L  + +++ PD      YY +I  P+ L  I  K +   YK   EF+ND
Sbjct: 294 DSGIGLTDLFERL-PDRHRDANYYIMIANPISLQDINKKVKTRRYKTFQEFQND 346

to top

>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)|
            (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite
            motif protein 33)
          Length = 1127

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
 Frame = +1

Query: 295  ISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARK---MEYKNRYEFRNDVAQIADNAH 465
            +S+ F +PV   + P+YY +I++PMDL T++ K +K     Y+   +F  DV  I  N  
Sbjct: 978  LSIEFQEPVPASI-PNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCE 1036

Query: 466  MYNE 477
             +NE
Sbjct: 1037 RFNE 1040

to top

>BRPF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-containing protein 1)|
           (BR140 protein)
          Length = 1214

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/74 (31%), Positives = 36/74 (48%)
 Frame = +1

Query: 253 ILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFR 432
           +L K ++ L+ +   ++ F +PV     PDY D I++PMD  T++       Y N  +F 
Sbjct: 636 LLRKTLEQLQEKDTGNI-FSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFE 694

Query: 433 NDVAQIADNAHMYN 474
            D   I  N   YN
Sbjct: 695 EDFNLIVSNCLKYN 708

to top

>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)|
            (Tripartite motif protein 33)
          Length = 1142

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
 Frame = +1

Query: 295  ISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARK---MEYKNRYEFRNDVAQIADNAH 465
            +S+ F +PV   + P+YY +I++PMDL T++ K +K     Y+   +F  DV  I  N  
Sbjct: 993  LSIEFQEPVPVSI-PNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCE 1051

Query: 466  MYNE 477
             +NE
Sbjct: 1052 RFNE 1055

to top

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 24/79 (30%), Positives = 39/79 (49%)
 Frame = +1

Query: 238  VELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKN 417
            +E  N   K+ D    +    + F++PV    A DYY++I+ P+ +  I +K    EY +
Sbjct: 867  IEKINTPPKVFDPRLMRDRRFVEFVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNH 926

Query: 418  RYEFRNDVAQIADNAHMYN 474
              +F  D+  I  NA  YN
Sbjct: 927  ADKFVADLILIQTNALEYN 945

to top

>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous|
           T-cell lymphoma associated antigen se14-3) (CTCL tumor
           antigen se14-3) (Zinc finger MYND domain containing
           protein 8)
          Length = 1186

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/60 (38%), Positives = 28/60 (46%)
 Frame = +1

Query: 307 FLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRH 486
           F KPV  +  PDY + I  PMDL T+   A+K  Y     F  D   I  N  +YN   H
Sbjct: 173 FQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNH 232

to top

>TIF1A_HUMAN (O15164) Transcription intermediary factor 1-alpha (TIF1-alpha)|
            (Tripartite motif protein 24) (RING finger protein 82)
          Length = 1050

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = +1

Query: 211  SAKRRRGGEVELSNILEKIVDHLRNQT---AISLLFLKPVTKKVAPDYYDVIQRPMDLGT 381
            S K++  G V+L+ I ++  + L        +SL F  PV   V PDYY +I+ PMDL T
Sbjct: 889  SEKKKTEGLVKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLTV-PDYYKIIKNPMDLST 947

Query: 382  IRDKARK--MEYKNRYEFRNDVAQIADNAHMYNE 477
            I+ + ++    Y    +F  D   I  N   +NE
Sbjct: 948  IKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNE 981

to top

>TIF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (TIF1-alpha)|
            (Tripartite motif protein 24)
          Length = 1051

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
 Frame = +1

Query: 169  SKRRTPADMTEYAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYY 348
            S++R    +T+  P  KR+         +L  +  H      +SL F  PV   V PDYY
Sbjct: 890  SEKRKSEGLTKLTPIDKRK------CERLLLFLYCH-----EMSLAFQDPVPLTV-PDYY 937

Query: 349  DVIQRPMDLGTIRDKARK--MEYKNRYEFRNDVAQIADNAHMYNE 477
             +I+ PMDL TI+ + ++    Y    +F  D   I  N   +NE
Sbjct: 938  KIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCAEFNE 982

to top

>RSC1_SCHPO (O74964) Chromatin structure remodeling complex protein rsc1|
           (Remodel the structure of chromatin complex subunit 1)
          Length = 803

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +1

Query: 328 KVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNE 477
           ++ P+YY  I++PM L  I+ K  K  Y+   +F +D   + DNA  +N+
Sbjct: 244 RMFPEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFND 293

to top

>GTE6_ARATH (Q9FT54) Transcription factor GTE6 (GENERAL TRANSCRIPTION FACTOR|
           GROUP E6)
          Length = 369

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
 Frame = +1

Query: 205 APSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAP--DYYDVIQRPMDLG 378
           A +AKR +    +   I  +I  H       +  F+ PV  +     DY++VI +PMD  
Sbjct: 85  AVAAKRMQDLMRQFGTIFRQITQH-----KCAWPFMHPVNVEGLGLHDYFEVIDKPMDFS 139

Query: 379 TIRDKARKME---YKNRYEFRNDVAQIADNAHMYNE 477
           TI+++    +   YK+  +   D+  + +NA  YNE
Sbjct: 140 TIKNQMEAKDGTGYKHVMQIYADMRLVFENAMNYNE 175

to top

>SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3.6.1.-)|
            (ATP-dependent helicase SNF2) (SWI/SNF complex component
            SNF2) (Regulatory protein SWI2) (Regulatory protein GAM1)
            (Transcription factor TYE3)
          Length = 1703

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +1

Query: 295  ISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYN 474
            +S +FL   +K + PDYY +I+ P+    I      + Y +  E   D   I  NA +YN
Sbjct: 1572 LSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYN 1631

to top

>TRI66_MOUSE (Q924W6) Tripartite motif protein 66|
          Length = 1209

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
 Frame = +1

Query: 292  AISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKME---YKNRYEFRNDVAQIADNA 462
            ++SL F +PV+  +A  YY +I+RPMDL  IR K +K +   Y    E  +DV  +  N 
Sbjct: 1054 SLSLPFHEPVSP-LARHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNC 1112

Query: 463  HMYN 474
              +N
Sbjct: 1113 AKFN 1116

to top

>TRI66_HUMAN (O15016) Tripartite motif protein 66|
          Length = 1214

 Score = 36.2 bits (82), Expect = 0.075
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = +1

Query: 295  ISLLFLKPVTKKVAPDYYDVIQRPMDLGTIRDKARKME---YKNRYEFRNDVAQIADNAH 465
            +SL F +PV+  +A  YY +I+RPMDL  IR K +K +   Y    E  +DV  +  N  
Sbjct: 1060 LSLPFHEPVSP-LARHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNCA 1118

Query: 466  MYN 474
             +N
Sbjct: 1119 KFN 1121

to top

>K0220_HUMAN (Q92617) Protein KIAA0220 (Fragment)|
          Length = 884

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 100 RDADILDHRPYRNDRKVP--ERDRASKRRTPADMTEYAPSAKRRRGGEVELS 249
           R AD+    P    R+V   E  R  KRR  AD+   +P  KRRR G+VE S
Sbjct: 809 RAADVEPSSPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDVEPS 860



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +1

Query: 154 ERDRASKRRTPADMTEYAPSAKRRRGGEVELS 249
           E  R  KRR  AD+   +P  KRRR G+VE S
Sbjct: 800 EPSRKPKRRRAADVEPSSPEPKRRRVGDVEPS 831

to top

>6PGD_CITDI (P41582) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44) (Fragment)
          Length = 445

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +1

Query: 202 YAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQ 360
           Y   AK  R G +  +  L+KI D       I+ L L P  KK+A DY   ++
Sbjct: 342 YGEIAKIFRAGCIIRAQFLQKITDAYAENAGIANLLLAPYFKKIADDYQQALR 394

to top

>CD2A2_HUMAN (Q8N726) Cyclin-dependent kinase inhibitor 2A, isoform 4 (p14ARF)|
           (p19ARF)
          Length = 173

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/65 (33%), Positives = 27/65 (41%)
 Frame = +3

Query: 333 RSRLLRCNPAPNGSGYHQGQGEEDGVQKQVRIQE*RGADSRQCAHVQRDAASSHPSTGRR 512
           RS+ L   P P   G+  GQ    G     R    RGA  R+  H       SHP+  RR
Sbjct: 92  RSQRLGQQPLPRRPGHDDGQRPSGGAAAAPR----RGAQLRRPRH-------SHPTRARR 140

Query: 513 APGAV 527
            PG +
Sbjct: 141 CPGGL 145

to top

>AMSA_ERWAM (Q46631) Putative tyrosine-protein kinase amsA (EC 2.7.10.2)|
           (Amylovoran biosynthesis membrane-associated protein
           amsA)
          Length = 726

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 24/85 (28%), Positives = 39/85 (45%)
 Frame = +1

Query: 208 PSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMDLGTIR 387
           PSA        EL+++L +++DH     A+S+LF    T       Y +   P+      
Sbjct: 8   PSANGGEAIRFELAHLLGQLLDHRWMIVAVSVLFTLMGT------LYSLFATPI---YSA 58

Query: 388 DKARKMEYKNRYEFRNDVAQIADNA 462
           D   ++E KN     ND++Q+  NA
Sbjct: 59  DAMVQVEQKNANTVLNDISQMMPNA 83

to top

>GNRR2_HUMAN (Q96P88) Gonadotropin-releasing hormone II receptor (Type II GnRH|
           receptor) (GnRH-II-R)
          Length = 379

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = -3

Query: 232 LLCAAWLMEHILSY-QLEYVSLMLDLFQVPF--CHFCMACDQECQHLEIHVFSFSCFFSL 62
           LL AAW +  +L++ QL     +     VPF  C    +   + Q    ++F+F C F L
Sbjct: 155 LLGAAWGLSFLLAFPQLFLFHTVHXAGPVPFTQCVTKGSFKAQWQETTYNLFTFCCLFLL 214

Query: 61  PSGALPPCY 35
           P  A+  CY
Sbjct: 215 PLTAMAICY 223

to top

>YS41_CAEEL (Q09370) Hypothetical protein ZK177.1|
          Length = 460

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = +1

Query: 115 LDHRPYRNDRKVPERDRASKRRTPADMTEYAPSAKRRRGGEVELSNILE---KIVDHLRN 285
           + H   +  R  P + RAS++R        A S K+R GG++ L  +++   +IVD ++ 
Sbjct: 260 ISHASDQKSRPKPTKPRASRKRAAI-----AQSKKKRSGGDLTLDGLVQLLGEIVDPVKL 314

Query: 286 QTAI 297
           Q  I
Sbjct: 315 QAEI 318

to top

>REPB_THIFE (P27186) DNA primase (EC 2.7.7.-) (Replication primase)|
          Length = 352

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 37/124 (29%), Positives = 49/124 (39%), Gaps = 21/124 (16%)
 Frame = +1

Query: 100 RDADILDHRPYRNDRKVP-ERDRASKRRTPADMTEYAPSAKRRRGGEVELSNILEKIVDH 276
           R A +   +P R   K   E   AS     A    Y    KR+RGGEV+LS +   I   
Sbjct: 203 RQAALKAQQPERTKAKPALELAAASGSAIDAYQRHYRDVLKRQRGGEVDLSRVDSMIAVR 262

Query: 277 LR----NQTAI--SLLFLKPVT--KKVAPDYYDVIQR------------PMDLGTIRDKA 396
           +R    +Q AI  ++    P T  K    D+ D  QR              DLG  R + 
Sbjct: 263 MRVTGHDQAAIEGAIRQCAPATRQKDEGRDWNDYAQRTARYAYSAAQPQAADLGKYRQQW 322

Query: 397 RKME 408
            K+E
Sbjct: 323 EKLE 326

to top

>SF04_MOUSE (Q8CH02) Splicing factor 4|
          Length = 643

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 21/99 (21%), Positives = 43/99 (43%)
 Frame = +1

Query: 193 MTEYAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMD 372
           +TE + + K++   + E+  + + I+ H R    + LL+ K + +     Y    +   +
Sbjct: 432 VTELSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKALQQH-QHGYDSDEEVDSE 490

Query: 373 LGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRHP 489
           LGT   + R+ME     E+   + Q+    H   +   P
Sbjct: 491 LGTWEHQLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPP 529

to top

>SF04_RAT (Q68FU8) Splicing factor 4|
          Length = 644

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 21/99 (21%), Positives = 43/99 (43%)
 Frame = +1

Query: 193 MTEYAPSAKRRRGGEVELSNILEKIVDHLRNQTAISLLFLKPVTKKVAPDYYDVIQRPMD 372
           +TE + + K++   + E+  + + I+ H R    + LL+ K + +     Y    +   +
Sbjct: 433 VTELSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKALQQH-QHGYDSDEEVDSE 491

Query: 373 LGTIRDKARKMEYKNRYEFRNDVAQIADNAHMYNETRHP 489
           LGT   + R+ME     E+   + Q+    H   +   P
Sbjct: 492 LGTWEHQLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPP 530


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,029,315
Number of Sequences: 219361
Number of extensions: 1652035
Number of successful extensions: 5370
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 5159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5363
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result