ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3h23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
2dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
3dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
4gb|AY108195.1| Zea mays PCO127996 mRNA sequence 137 5e-29
5gb|AC090060.15| Homo sapiens 12q BAC RP11-84H15 (Roswell Park Ca... 44 0.53
6gb|AC092791.2| Homo sapiens BAC clone RP11-795L3 from 2, complet... 44 0.53
7dbj|AK108404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
8gb|BC076786.1| Xenopus laevis bromodomain containing 4, mRNA (cD... 42 2.1
9gb|BC073443.1| Xenopus laevis hypothetical protein LOC443648, mR... 42 2.1
10emb|BX321867.5| Human DNA sequence from clone RP11-533H4 on chro... 42 2.1
11emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chro... 42 2.1
12emb|AL035587.5|HS475N16 Human DNA sequence from clone RP3-475N16... 42 2.1
13gb|AC084198.31| Homo sapiens 3 BAC RP11-454H13 (Roswell Park Can... 42 2.1
14gb|BC097528.1| Xenopus laevis hypothetical protein LOC443648, mR... 42 2.1
15dbj|AB047240.1| Human endogenous retrovirus HERV-K(II) DNA, comp... 42 2.1
16dbj|AK064421.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
17emb|CT737399.2| Pan troglodytes chromosome X clone CH251-213G08 ... 42 2.1
18dbj|AP001360.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
19dbj|AP000346.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 42 2.1
20dbj|AP000345.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 42 2.1
21gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cance... 40 8.2
22gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete se... 40 8.2
23ref|NG_001472.1| Mus musculus transcription factor Dp 1, pseudog... 40 8.2
24emb|BX537343.8| Zebrafish DNA sequence from clone CH211-192A19 i... 40 8.2
25gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, compl... 40 8.2
26gb|AC079140.6| Homo sapiens BAC clone RP11-478C6 from 4, complet... 40 8.2
27gb|AC018442.8| Homo sapiens chromosome 8, clone RP11-402L5, comp... 40 8.2
28gb|AF157255.1|AF157255 Hesseltinella vesiculosa translation elon... 40 8.2
29gb|U78796.1|MMU78796 Mus musculus cell cycle regulatory transcri... 40 8.2
30gb|AC155296.2| Mus musculus BAC clone RP24-303N23 from chromosom... 40 8.2
31gb|AC139754.4| Mus musculus BAC clone RP24-92J3 from 10, complet... 40 8.2
32dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.2
33dbj|AP001573.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.2 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  161 bits (81), Expect = 3e-36
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                            
Query: 91       catgaatttcgagatgctgacattcttgatcacaggccatacagaaatgacagaaaggta 150
                |||||||||||||||| |||| | |||||||  |||||||||| ||||||||||| ||||
Sbjct: 25977617 catgaatttcgagatgatgacctacttgatcctaggccatacaaaaatgacagaagggta 25977558

                                                                            
Query: 151      cctgaaagagatcgagcatcaaagagacgtactccagctgatatgacagaatatgctcca 210
                |||||||||| ||||||  ||||||||||||| ||||||||||||||||||||  | |||
Sbjct: 25977557 cctgaaagaggtcgagcggcaaagagacgtaccccagctgatatgacagaatacacacca 25977498

                                             
Query: 211      tcagccaagcggcgcagaggaggagaggt 239
                 |||| ||||||| |||||||||||||||
Sbjct: 25977497 ccagctaagcggcacagaggaggagaggt 25977469



 Score =  101 bits (51), Expect = 3e-18
 Identities = 178/218 (81%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                            
Query: 236      aggttgagctctccaacatattggagaagatagttgaccacttgcggaaccaaactgcta 295
                ||||||||||||||||||||||||| || |||||||||||||||||||  |||   ||| 
Sbjct: 25976981 aggttgagctctccaacatattggaaaaaatagttgaccacttgcgga--caatgagctg 25976924

                                                                            
Query: 296      tatcattgctgtttcttaaaccagtgacaaagaaagtcgctcccgattactacgatgtaa 355
                | ||||| || || | |||||| ||||| |||||||  ||||| |||||||  ||  |||
Sbjct: 25976923 t-tcattccttttccgtaaaccggtgacgaagaaagaggctcctgattactttgacataa 25976865

                                                                            
Query: 356      tccagcgcccaatggatctgggtaccatcagggacaaggcgaggaagatggagtacaaaa 415
                |  |||| ||||||||||| ||||| || |||||||||| | | ||||||||||| ||||
Sbjct: 25976864 ttgagcgtccaatggatcttggtactataagggacaaggtgcgaaagatggagtataaaa 25976805

                                                      
Query: 416      acaggtacgaattcaggaatgacgtggcgcagatagca 453
                | ||| | || || ||| |||| ||||| |||||||||
Sbjct: 25976804 atagggaggattttaggcatgatgtggctcagatagca 25976767



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 8        aacagaggctaattgaagctaggat 32
                ||||||| |||||||||||||||||
Sbjct: 25977706 aacagagactaattgaagctaggat 25977682



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 484      catcctcacatccctccactggccgacgagctcctggagctgtgcgaccaccttcttgat 543
                ||||| ||||||||||| || || || |||||| ||||| |||| ||  | |||||||| 
Sbjct: 25976736 catccccacatccctccgcttgctgatgagctcttggagttgtgtgattatcttcttgag 25976677

                                 
Query: 544      gaaagcgcagacgtgct 560
                |||||||| || |||||
Sbjct: 25976676 gaaagcgcggatgtgct 25976660
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score =  161 bits (81), Expect = 3e-36
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                         
Query: 91    catgaatttcgagatgctgacattcttgatcacaggccatacagaaatgacagaaaggta 150
             |||||||||||||||| |||| | |||||||  |||||||||| ||||||||||| ||||
Sbjct: 15475 catgaatttcgagatgatgacctacttgatcctaggccatacaaaaatgacagaagggta 15416

                                                                         
Query: 151   cctgaaagagatcgagcatcaaagagacgtactccagctgatatgacagaatatgctcca 210
             |||||||||| ||||||  ||||||||||||| ||||||||||||||||||||  | |||
Sbjct: 15415 cctgaaagaggtcgagcggcaaagagacgtaccccagctgatatgacagaatacacacca 15356

                                          
Query: 211   tcagccaagcggcgcagaggaggagaggt 239
              |||| ||||||| |||||||||||||||
Sbjct: 15355 ccagctaagcggcacagaggaggagaggt 15327



 Score =  101 bits (51), Expect = 3e-18
 Identities = 178/218 (81%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                         
Query: 236   aggttgagctctccaacatattggagaagatagttgaccacttgcggaaccaaactgcta 295
             ||||||||||||||||||||||||| || |||||||||||||||||||  |||   ||| 
Sbjct: 14839 aggttgagctctccaacatattggaaaaaatagttgaccacttgcgga--caatgagctg 14782

                                                                         
Query: 296   tatcattgctgtttcttaaaccagtgacaaagaaagtcgctcccgattactacgatgtaa 355
             | ||||| || || | |||||| ||||| |||||||  ||||| |||||||  ||  |||
Sbjct: 14781 t-tcattccttttccgtaaaccggtgacgaagaaagaggctcctgattactttgacataa 14723

                                                                         
Query: 356   tccagcgcccaatggatctgggtaccatcagggacaaggcgaggaagatggagtacaaaa 415
             |  |||| ||||||||||| ||||| || |||||||||| | | ||||||||||| ||||
Sbjct: 14722 ttgagcgtccaatggatcttggtactataagggacaaggtgcgaaagatggagtataaaa 14663

                                                   
Query: 416   acaggtacgaattcaggaatgacgtggcgcagatagca 453
             | ||| | || || ||| |||| ||||| |||||||||
Sbjct: 14662 atagggaggattttaggcatgatgtggctcagatagca 14625



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 8     aacagaggctaattgaagctaggat 32
             ||||||| |||||||||||||||||
Sbjct: 15564 aacagagactaattgaagctaggat 15540



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 484   catcctcacatccctccactggccgacgagctcctggagctgtgcgaccaccttcttgat 543
             ||||| ||||||||||| || || || |||||| ||||| |||| ||  | |||||||| 
Sbjct: 14594 catccccacatccctccgcttgctgatgagctcttggagttgtgtgattatcttcttgag 14535

                              
Query: 544   gaaagcgcagacgtgct 560
             |||||||| || |||||
Sbjct: 14534 gaaagcgcggatgtgct 14518
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0017B12
          Length = 157424

 Score =  161 bits (81), Expect = 3e-36
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                          
Query: 91     catgaatttcgagatgctgacattcttgatcacaggccatacagaaatgacagaaaggta 150
              |||||||||||||||| |||| | |||||||  |||||||||| ||||||||||| ||||
Sbjct: 132715 catgaatttcgagatgatgacctacttgatcctaggccatacaaaaatgacagaagggta 132656

                                                                          
Query: 151    cctgaaagagatcgagcatcaaagagacgtactccagctgatatgacagaatatgctcca 210
              |||||||||| ||||||  ||||||||||||| ||||||||||||||||||||  | |||
Sbjct: 132655 cctgaaagaggtcgagcggcaaagagacgtaccccagctgatatgacagaatacacacca 132596

                                           
Query: 211    tcagccaagcggcgcagaggaggagaggt 239
               |||| ||||||| |||||||||||||||
Sbjct: 132595 ccagctaagcggcacagaggaggagaggt 132567



 Score =  101 bits (51), Expect = 3e-18
 Identities = 178/218 (81%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                          
Query: 236    aggttgagctctccaacatattggagaagatagttgaccacttgcggaaccaaactgcta 295
              ||||||||||||||||||||||||| || |||||||||||||||||||  |||   ||| 
Sbjct: 132079 aggttgagctctccaacatattggaaaaaatagttgaccacttgcgga--caatgagctg 132022

                                                                          
Query: 296    tatcattgctgtttcttaaaccagtgacaaagaaagtcgctcccgattactacgatgtaa 355
              | ||||| || || | |||||| ||||| |||||||  ||||| |||||||  ||  |||
Sbjct: 132021 t-tcattccttttccgtaaaccggtgacgaagaaagaggctcctgattactttgacataa 131963

                                                                          
Query: 356    tccagcgcccaatggatctgggtaccatcagggacaaggcgaggaagatggagtacaaaa 415
              |  |||| ||||||||||| ||||| || |||||||||| | | ||||||||||| ||||
Sbjct: 131962 ttgagcgtccaatggatcttggtactataagggacaaggtgcgaaagatggagtataaaa 131903

                                                    
Query: 416    acaggtacgaattcaggaatgacgtggcgcagatagca 453
              | ||| | || || ||| |||| ||||| |||||||||
Sbjct: 131902 atagggaggattttaggcatgatgtggctcagatagca 131865



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 8      aacagaggctaattgaagctaggat 32
              ||||||| |||||||||||||||||
Sbjct: 132804 aacagagactaattgaagctaggat 132780



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                          
Query: 484    catcctcacatccctccactggccgacgagctcctggagctgtgcgaccaccttcttgat 543
              ||||| ||||||||||| || || || |||||| ||||| |||| ||  | |||||||| 
Sbjct: 131834 catccccacatccctccgcttgctgatgagctcttggagttgtgtgattatcttcttgag 131775

                               
Query: 544    gaaagcgcagacgtgct 560
              |||||||| || |||||
Sbjct: 131774 gaaagcgcggatgtgct 131758
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>gb|AY108195.1| Zea mays PCO127996 mRNA sequence
          Length = 899

 Score =  137 bits (69), Expect = 5e-29
 Identities = 153/181 (84%)
 Strand = Plus / Plus

                                                                       
Query: 102 agatgctgacattcttgatcacaggccatacagaaatgacagaaaggtacctgaaagaga 161
           ||||| |||| | ||||||||||||||||||||||||||||| | ||||||||||||| |
Sbjct: 62  agatgatgacttacttgatcacaggccatacagaaatgacaggagggtacctgaaagaca 121

                                                                       
Query: 162 tcgagcatcaaagagacgtactccagctgatatgacagaatatgctccatcagccaagcg 221
           |||||||  |||  ||  || |||||||  | ||   | ||||||  |||| ||||||||
Sbjct: 122 tcgagcactaaaacgatctagtccagctcctgtggttggatatgcatcatctgccaagcg 181

                                                                       
Query: 222 gcgcagaggaggagaggttgagctctccaacatattggagaagatagttgaccacttgcg 281
            |||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||
Sbjct: 182 tcgcagaggaggagaggttgagctctccaacatattggaaaaagtagttgatcacttgcg 241

            
Query: 282 g 282
           |
Sbjct: 242 g 242



 Score =  131 bits (66), Expect = 3e-27
 Identities = 210/258 (81%)
 Strand = Plus / Plus

                                                                       
Query: 297 atcattgctgtttcttaaaccagtgacaaagaaagtcgctcccgattactacgatgtaat 356
           |||| |||||||| | |||||||||||||||||||  ||| | ||||||   ||| | ||
Sbjct: 254 atcactgctgtttttaaaaccagtgacaaagaaagaagcttctgattaccttgatatcat 313

                                                                       
Query: 357 ccagcgcccaatggatctgggtaccatcagggacaaggcgaggaagatggagtacaaaaa 416
            | |  |||||||||||| ||||||||||||||||||| ||| ||||||| ||||| |||
Sbjct: 314 acggtacccaatggatcttggtaccatcagggacaaggtgagaaagatggtgtacagaaa 373

                                                                       
Query: 417 caggtacgaattcaggaatgacgtggcgcagatagcagacaatgcgcacatgtacaacga 476
           |||| | ||||||||| | ||||| || ||||||  |  |||||| ||||| ||||||||
Sbjct: 374 cagggatgaattcaggcacgacgtagcacagatacaactcaatgcacacatatacaacga 433

                                                                       
Query: 477 gacgcggcatcctcacatccctccactggccgacgagctcctggagctgtgcgaccacct 536
            || ||  |||||||||||||||| || || ||||||||| ||||| | |||||||| ||
Sbjct: 434 cactcgctatcctcacatccctccgcttgctgacgagctcatggaggtctgcgaccatct 493

                             
Query: 537 tcttgatgaaagcgcaga 554
            ||| | |||| ||||||
Sbjct: 494 gctttacgaaaacgcaga 511
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>gb|AC090060.15| Homo sapiens 12q BAC RP11-84H15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 159135

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 167   catcaaagagacgtactccagctgatatga 196
             ||||||||||| ||||||| ||||||||||
Sbjct: 41884 catcaaagagatgtactcctgctgatatga 41913
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>gb|AC092791.2| Homo sapiens BAC clone RP11-795L3 from 2, complete sequence
          Length = 133651

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    tatagcagggaggaagagctcc 55
             ||||||||||||||||||||||
Sbjct: 66285 tatagcagggaggaagagctcc 66264
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>dbj|AK108404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G07, full
           insert sequence
          Length = 804

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                       
Query: 376 ggtaccatcagggacaaggcgaggaagatggagtacaaaaacaggtacgaattcaggaat 435
           ||||| || |||||||||| | | ||||||||||| ||||| ||| | || || ||| ||
Sbjct: 2   ggtactataagggacaaggtgcgaaagatggagtataaaaatagggaggattttaggcat 61

                             
Query: 436 gacgtggcgcagatagca 453
           || ||||| |||||||||
Sbjct: 62  gatgtggctcagatagca 79



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 484 catcctcacatccctccactggccgacgagctcctggagctgtgcgaccaccttcttgat 543
           ||||| ||||||||||| || || || |||||| ||||| |||| ||  | |||||||| 
Sbjct: 110 catccccacatccctccgcttgctgatgagctcttggagttgtgtgattatcttcttgag 169

                            
Query: 544 gaaagcgcagacgtgct 560
           |||||||| || |||||
Sbjct: 170 gaaagcgcggatgtgct 186
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>gb|BC076786.1| Xenopus laevis bromodomain containing 4, mRNA (cDNA clone MGC:83700
            IMAGE:6638394), complete cds
          Length = 6412

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  cccaatggatctgggtaccat 383
            |||||||||||||||||||||
Sbjct: 1367 cccaatggatctgggtaccat 1387
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>gb|BC073443.1| Xenopus laevis hypothetical protein LOC443648, mRNA (cDNA clone
            IMAGE:5516216), partial cds
          Length = 1857

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  cccaatggatctgggtaccat 383
            |||||||||||||||||||||
Sbjct: 1420 cccaatggatctgggtaccat 1440
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>emb|BX321867.5| Human DNA sequence from clone RP11-533H4 on chromosome X, complete
             sequence
          Length = 91774

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 484   catcctcacatccctccactg 504
             |||||||||||||||||||||
Sbjct: 85684 catcctcacatccctccactg 85664
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>emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chromosome 13q31.1-32.3,
             complete sequence
          Length = 159620

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    taattgaagctaggatttata 37
             |||||||||||||||||||||
Sbjct: 25873 taattgaagctaggatttata 25853
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>emb|AL035587.5|HS475N16 Human DNA sequence from clone RP3-475N16 on chromosome 6p12.3-21.2
             Contains part of a novel gene,a novel  gene (CTG4A), a
             gene similar to pre TCR alpha, a novel gene for a  protein
             similar to 60S ribosomal protein L7A (RPL7A), the 3' end
             of the gene for KIAA0240 protein and  CpG islands,
             complete sequence
          Length = 113109

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 402   gatggagtacaaaaacaggtacgaa 426
             |||||||||||| ||||||||||||
Sbjct: 50103 gatggagtacaagaacaggtacgaa 50127
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>gb|AC084198.31| Homo sapiens 3 BAC RP11-454H13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 194955

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 402   gatggagtacaaaaacaggtacgaa 426
             |||||||||||| ||||||||||||
Sbjct: 96965 gatggagtacaagaacaggtacgaa 96989
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>gb|BC097528.1| Xenopus laevis hypothetical protein LOC443648, mRNA (cDNA clone
            IMAGE:5156827), partial cds
          Length = 1898

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  cccaatggatctgggtaccat 383
            |||||||||||||||||||||
Sbjct: 1423 cccaatggatctgggtaccat 1443
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>dbj|AB047240.1| Human endogenous retrovirus HERV-K(II) DNA, complete sequence and
            flanking region
          Length = 11122

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 402  gatggagtacaaaaacaggtacgaa 426
            |||||||||||| ||||||||||||
Sbjct: 3226 gatggagtacaagaacaggtacgaa 3250
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>dbj|AK064421.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-B10, full
            insert sequence
          Length = 2640

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 8    aacagaggctaattgaagctaggat 32
            ||||||| |||||||||||||||||
Sbjct: 2576 aacagagactaattgaagctaggat 2600
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>emb|CT737399.2| Pan troglodytes chromosome X clone CH251-213G08 map Xq28, complete
             sequence
          Length = 144757

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 484   catcctcacatccctccactg 504
             |||||||||||||||||||||
Sbjct: 15643 catcctcacatccctccactg 15623
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>dbj|AP001360.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831A10, complete
              sequence
          Length = 190766

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 36     tagcagggaggaagagctcca 56
              |||||||||||||||||||||
Sbjct: 115079 tagcagggaggaagagctcca 115059
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>dbj|AP000346.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1572G7
          Length = 151600

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 402   gatggagtacaaaaacaggtacgaa 426
             |||||||||||| ||||||||||||
Sbjct: 23276 gatggagtacaagaacaggtacgaa 23300
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>dbj|AP000345.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB208E9
          Length = 113255

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 402   gatggagtacaaaaacaggtacgaa 426
             |||||||||||| ||||||||||||
Sbjct: 60687 gatggagtacaagaacaggtacgaa 60711
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>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226269

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    actccagctgatatgacaga 200
              ||||||||||||||||||||
Sbjct: 181094 actccagctgatatgacaga 181075
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>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence
          Length = 119355

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 20   ttgaagctaggatttatagc 39
            ||||||||||||||||||||
Sbjct: 3054 ttgaagctaggatttatagc 3035
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>ref|NG_001472.1| Mus musculus transcription factor Dp 1, pseudogene (Tfdp1-ps) on
            chromosome 1
          Length = 2002

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  gacgagctcctggagctgtg 527
            ||||||||||||||||||||
Sbjct: 1111 gacgagctcctggagctgtg 1092
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>emb|BX537343.8| Zebrafish DNA sequence from clone CH211-192A19 in linkage group 16,
             complete sequence
          Length = 59017

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   aagaaagtcgctcccgatta 344
             ||||||||||||||||||||
Sbjct: 30389 aagaaagtcgctcccgatta 30408
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>gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, complete sequence
          Length = 160573

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 530    accaccttcttgatgaaagc 549
              ||||||||||||||||||||
Sbjct: 107470 accaccttcttgatgaaagc 107489
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>gb|AC079140.6| Homo sapiens BAC clone RP11-478C6 from 4, complete sequence
          Length = 156265

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 403   atggagtacaaaaacaggtacgaa 426
             ||||||||||| ||||||||||||
Sbjct: 25942 atggagtacaagaacaggtacgaa 25965
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>gb|AC018442.8| Homo sapiens chromosome 8, clone RP11-402L5, complete sequence
          Length = 192545

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    atggagtacaaaaacaggta 422
              ||||||||||||||||||||
Sbjct: 175663 atggagtacaaaaacaggta 175682
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>gb|AF157255.1|AF157255 Hesseltinella vesiculosa translation elongation factor 1-alpha
           (EF-1alpha) gene, partial cds
          Length = 1252

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 535 cttcttgatgaaagcgcagacgtgcttgacga 566
           |||||||||||||||| |||| | ||||||||
Sbjct: 480 cttcttgatgaaagcggagacttccttgacga 449
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>gb|U78796.1|MMU78796 Mus musculus cell cycle regulatory transcription factor DP1,
            processed pseudogene, partial sequence
          Length = 2002

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  gacgagctcctggagctgtg 527
            ||||||||||||||||||||
Sbjct: 1111 gacgagctcctggagctgtg 1092
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>gb|AC155296.2| Mus musculus BAC clone RP24-303N23 from chromosome 12, complete sequence
          Length = 167744

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 307    tttcttaaaccagtgacaaagaaa 330
              |||||||||||| |||||||||||
Sbjct: 137423 tttcttaaaccaatgacaaagaaa 137400
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>gb|AC139754.4| Mus musculus BAC clone RP24-92J3 from 10, complete sequence
          Length = 222053

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 284   accaaactgctatatcattgctgtttct 311
             |||||| |||| ||||||||||||||||
Sbjct: 41914 accaaagtgctttatcattgctgtttct 41941
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>dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1935H12
          Length = 148498

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   atggagtacaaaaacaggta 422
             ||||||||||||||||||||
Sbjct: 21485 atggagtacaaaaacaggta 21504
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>dbj|AP001573.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1915D9
          Length = 155174

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    atggagtacaaaaacaggta 422
              ||||||||||||||||||||
Sbjct: 152342 atggagtacaaaaacaggta 152361


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,581,004
Number of Sequences: 3902068
Number of extensions: 4581004
Number of successful extensions: 90676
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90577
Number of HSP's gapped (non-prelim): 99
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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