>DPO3_LACLA (Q9CDT7) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1638

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -1

Query: 511  LIGKNGKMVIFTLSPPCENDIIMTGSTRRRRGLWNHPNRSPEQKYTDEIR 362
            +IG    ++++ +    EN +  T   R R+G+WN       +KY + +R
Sbjct: 1393 VIGCRDDIMVYLIHKGLENGLAFTIMERVRKGMWNKIPAEEREKYVEAMR 1442

>FOLKP_CHLTR (O84619) Folate synthesis bifunctional protein [Includes:|
           2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
           pyrophosphokinase (EC 2.7.6.3)
           (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase)
           (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyropho
          Length = 450

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -2

Query: 540 PDTALSLEGG*LEKMAKWSFSLYHHL--VKMISS*RVRRDEDVGFGITPI 397
           PD  LS E   +E+M +W  S       V + +S +V  D  +GFG TP+
Sbjct: 319 PDCVLSYEESPIEQMLRWGESQLEQFAQVGLDTSWQVVFDPGIGFGKTPV 368

>FUBP2_RAT (Q99PF5) Far upstream element-binding protein 2 (FUSE-binding|
           protein 2) (KH type splicing regulatory protein) (KSRP)
           (MAP2 RNA trans-acting protein 1) (MARTA1)
          Length = 721

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 149 HGSRLISLSLLAFSYLPTGPPGRPTVADAGGARHGGLGRPWG 24
           H +R+I+  L +    P GPPG P +   G  R  G G  WG
Sbjct: 382 HAARIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGN-WG 422

>Y5100_ANASP (Q8YM40) Hypothetical UPF0192 protein all5100 precursor|
          Length = 1906

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 78  RPPRWPCREVGEGQERERDQTGPMRQPEREKGGPLAG*VEAYTSKY 215
           +P  W   +V   + +  D T P+R+    K G LA  V+A T+KY
Sbjct: 443 KPAEWKSFQVSGKKNQSVDVTVPLREKINAKTGMLAYGVQARTNKY 488

>S12A3_RAT (P55018) Solute carrier family 12 member 3 (Thiazide-sensitive|
           sodium-chloride cotransporter) (Na-Cl symporter)
          Length = 1002

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 340 LFADWSLILFRPYIFARDSDWGDSKAHVFV 429
           LF D  L L  PY+  R   WG  K  VFV
Sbjct: 817 LFDDGGLTLLIPYLLHRKKRWGKCKIRVFV 846

>S12A3_MOUSE (P59158) Solute carrier family 12 member 3 (Thiazide-sensitive|
           sodium-chloride cotransporter) (Na-Cl symporter)
          Length = 1002

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 340 LFADWSLILFRPYIFARDSDWGDSKAHVFV 429
           LF D  L L  PY+  R   WG  K  VFV
Sbjct: 817 LFDDGGLTLLIPYLLHRKKRWGKCKIRVFV 846

>AMPA_LEPIN (Q8F0Q1) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 495

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 387 SGLRLG*FQSPRLRLVEPVMMISFSQGGD-RVKMTILPFFPISPLRERE 530
           +GL++  F  P+L+  +   ++S  +G D + KM +L + P+ P+ +++
Sbjct: 204 NGLKITVFDEPQLKKEKMGGILSVCEGSDKKAKMILLEYTPVKPITKKK 252

>AMPA_LEPIC (Q72UC6) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 495

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 387 SGLRLG*FQSPRLRLVEPVMMISFSQGGD-RVKMTILPFFPISPLRERE 530
           +GL++  F  P+L+  +   ++S  +G D + KM +L + P+ P+ +++
Sbjct: 204 NGLKITVFDEPQLKKEKMGGILSVCEGSDKKAKMILLEYTPVKPITKKK 252

>PALB_KLULA (Q6CKY3) Calpain-like protease palB/RIM13 (EC 3.4.22.-) (Cysteine|
           protease RIM13)
          Length = 685

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = -1

Query: 499 NGKMVIFTLSPP--CENDIIMTGSTRRRRGLWNHPNRSPEQKYTDEIRSGTNLQKGYSQT 326
           N K   FT+  P   EN  + T     +   W + N  P  KYT  ++        ++  
Sbjct: 285 NWKKEQFTILNPHGTENPTVYTWDDLIKEFKWLYVNWDPYSKYTQRVKLHDRYPDKFNAY 344

Query: 325 SPWRQKP 305
             W QKP
Sbjct: 345 PTWTQKP 351


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,117,075
Number of Sequences: 219361
Number of extensions: 1844676
Number of successful extensions: 5478
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5470
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)