Clone Information

BLAST Search Result

Clone Name	basd3h20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CSK2E_ARATH (O80507) Putative casein kinase II subunit beta-4 (C...	93	4e-19
2	CSK2D_ARATH (O81275) Casein kinase II subunit beta-3 (CK II beta-3)	89	5e-18
3	CSK2B_ARATH (P40228) Casein kinase II subunit beta (CK II beta)	79	5e-15
4	CSK2C_ARATH (P40229) Casein kinase II subunit beta' (CK II beta')	79	5e-15
5	CSK2B_XENLA (P28021) Casein kinase II subunit beta (CK II beta) ...	67	3e-11
6	CSK2B_RAT (P67874) Casein kinase II subunit beta (CK II beta) (P...	67	3e-11
7	CSK2B_RABIT (P67873) Casein kinase II subunit beta (CK II beta) ...	67	3e-11
8	CSK2B_PIG (P67872) Casein kinase II subunit beta (CK II beta) (P...	67	3e-11
9	CSK2B_MOUSE (P67871) Casein kinase II subunit beta (CK II beta) ...	67	3e-11
10	CSK2B_HUMAN (P67870) Casein kinase II subunit beta (CK II beta) ...	67	3e-11
11	CSK2B_CHICK (P67869) Casein kinase II subunit beta (CK II beta) ...	67	3e-11
12	CSK2B_BRARE (Q91398) Casein kinase II subunit beta (CK II beta)	67	3e-11
13	CSK2B_BOVIN (P67868) Casein kinase II subunit beta (CK II beta) ...	67	3e-11
14	CSK2B_DROME (P08182) Casein kinase II subunit beta (CK II beta)	65	8e-11
15	CSK2B_SPOFR (O76485) Casein kinase II subunit beta (CK II beta)	65	1e-10
16	CSK2B_CAEEL (P28548) Casein kinase II subunit beta (CK II beta)	64	2e-10
17	CSK2C_DROME (O96863) Casein kinase II subunit beta' (CK II beta')	58	1e-08
18	CSK2B_SCHPO (P40232) Casein kinase II subunit beta (CK II beta)	57	4e-08
19	CSK2C_NEUCR (Q8TG11) Casein kinase II subunit beta-2 (CK II beta-2)	51	1e-06
20	CSK2C_SCHPO (O94281) Probable casein kinase II subunit beta-2 (C...	49	1e-05
21	STEL9_DROME (Q7KV23) Stellate protein CG33247	48	1e-05
22	STEL8_DROME (Q7KV22) Stellate protein CG33246	48	1e-05
23	STEL7_DROME (Q7KV19) Stellate protein CG33243	48	1e-05
24	STEL6_DROME (Q7KV17) Stellate protein CG33241	48	1e-05
25	STEL4_DROME (Q7KV15) Stellate protein CG33239	48	1e-05
26	STEL3_DROME (Q7KV14) Stellate protein CG33238	48	1e-05
27	STEL2_DROME (Q7KV13) Stellate protein CG33237	48	1e-05
28	STEL1_DROME (Q7KV12) Stellate protein CG33236/CG33244	48	1e-05
29	SSL_DROME (Q24536) Suppressor-of-stellate-like protein (Suste-li...	48	1e-05
30	STELO_DROME (Q9NIV2) Stellate orphon protein at 12D	48	1e-05
31	STEL5_DROME (P15021) Stellate protein CG33240/CG33245	48	1e-05
32	CSK2B_NEUCR (Q8TG12) Casein kinase II subunit beta-1 (CK II beta-1)	48	2e-05
33	CSK2B_CANAL (O59906) Casein kinase II subunit beta (CK II beta)	42	9e-04
34	CSK2B_YEAST (P43639) Casein kinase II subunit beta (CK II beta)	40	0.003
35	CSK2C_YEAST (P38930) Casein kinase II subunit beta' (CK II beta')	40	0.004
36	KCNQ1_HUMAN (P51787) Potassium voltage-gated channel subfamily K...	31	1.6
37	FBLN1_CHICK (O73775) Fibulin-1 precursor	31	2.1
38	RUSC1_HUMAN (Q9BVN2) RUN and SH3 domain-containing protein 1 (Ne...	31	2.1
39	PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)	30	2.7
40	ALU1_HUMAN (P39188) Alu subfamily J sequence contamination warni...	30	3.5
41	RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1	30	3.5
42	ASP_DROME (Q9VC45) Protein abnormal spindle	27	4.2
43	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	30	4.6
44	Y2191_MYCTU (Q10384) Hypothetical protein Rv2191/MT2247	30	4.6
45	FBLN1_CERAE (Q8MJJ9) Fibulin-1 (Fragment)	29	6.0
46	FBLN1_HUMAN (P23142) Fibulin-1 precursor	29	6.0
47	UBP21_HUMAN (Q9UK80) Ubiquitin carboxyl-terminal hydrolase 21 (E...	24	7.6
48	VRP1_YEAST (P37370) Verprolin	29	7.8
49	NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytopl...	29	7.8
50	CCPR2_CANAL (Q59X94) Putative heme-binding peroxidase (EC 1.11.1.-)	29	7.8
51	PAPPA_MOUSE (Q8R4K8) Pappalysin-1 precursor (EC 3.4.24.79) (Preg...	29	7.8
52	IL16_SAISC (O62677) Interleukin-16 precursor (IL-16) (Lymphocyte...	29	7.8

>CSK2E_ARATH (O80507) Putative casein kinase II subunit beta-4 (CK II beta-4)|
          Length = 283

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 46/105 (43%), Positives = 53/105 (50%)
 Frame = +1

Query: 178 GAGLDRKRISEALDKHLEKXXXXXXXXXXXXXXXXXXXXVVVPSSIPKGRCXXXXXXXXX 357
           G  +DRKRI++ALDKHL+K                        S +   R          
Sbjct: 23  GGAIDRKRINDALDKHLKKSSPSTSRVFTSKDKDSVPSTSTAKSQL-HSRSPDVESDTDS 81

Query: 358 XXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
                       TSWISW+CNLRGNEFFCEVD+DYIQDDFNLCGL
Sbjct: 82  EGSDVSGSEGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGL 126

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>CSK2D_ARATH (O81275) Casein kinase II subunit beta-3 (CK II beta-3)|
          Length = 276

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 49/124 (39%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
 Frame = +1

Query: 154 MYKQGSAGGAG-----------LDRKRISEALDKHLEKXXXXXXXXXXXXXXXXXXXXVV 300
           MYK+ S GG G           +DRKRI++AL+K LEK                      
Sbjct: 1   MYKERSGGGGGGSSRSEILGGAIDRKRINDALNKKLEKSSTSTTTSRVFSSKDKDPFSF- 59

Query: 301 VPSSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFN 480
              +  K +                      TSWISW+CNLRGN+FFCEVD+DYIQDDFN
Sbjct: 60  ---TSTKTQLPDVESETDSEGSDVSGSEGDDTSWISWFCNLRGNDFFCEVDEDYIQDDFN 116

Query: 481 LCGL 492
           LCGL
Sbjct: 117 LCGL 120

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>CSK2B_ARATH (P40228) Casein kinase II subunit beta (CK II beta)|
          Length = 287

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGL
Sbjct: 99  TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGL 131

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>CSK2C_ARATH (P40229) Casein kinase II subunit beta' (CK II beta')|
          Length = 282

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           TSWISW+CNLRGNEFFCEVDDDYIQDDFNLCGL
Sbjct: 94  TSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGL 126

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>CSK2B_XENLA (P28021) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_RAT (P67874) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_RABIT (P67873) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_PIG (P67872) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_MOUSE (P67871) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_HUMAN (P67870) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
           (G5a)
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_CHICK (P67869) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_BRARE (Q91398) Casein kinase II subunit beta (CK II beta)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_BOVIN (P67868) Casein kinase II subunit beta (CK II beta) (Phosvitin)|
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_DROME (P08182) Casein kinase II subunit beta (CK II beta)|
          Length = 235

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SW++W+C LRGNEFFCEVD+DYIQD FNL GL
Sbjct: 8   SWVTWFCGLRGNEFFCEVDEDYIQDKFNLTGL 39

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>CSK2B_SPOFR (O76485) Casein kinase II subunit beta (CK II beta)|
          Length = 221

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C LRGNEFFCEVD+DYI D FNL GL
Sbjct: 8   SWISWFCGLRGNEFFCEVDEDYINDKFNLTGL 39

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>CSK2B_CAEEL (P28548) Casein kinase II subunit beta (CK II beta)|
          Length = 234

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWI+W+C LRGNEFFCEVD++YIQD FNL GL
Sbjct: 8   SWITWFCGLRGNEFFCEVDEEYIQDRFNLTGL 39

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>CSK2C_DROME (O96863) Casein kinase II subunit beta' (CK II beta')|
          Length = 219

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNL 483
           +SWI W+C  RGNEFFCEVD++YIQD FNL
Sbjct: 7   SSWIHWFCKQRGNEFFCEVDEEYIQDKFNL 36

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>CSK2B_SCHPO (P40232) Casein kinase II subunit beta (CK II beta)|
          Length = 231

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 400 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           W+ W+  L+GNEFFCEVD+D+IQD FNL GL
Sbjct: 16  WVDWFLGLKGNEFFCEVDEDFIQDRFNLTGL 46

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>CSK2C_NEUCR (Q8TG11) Casein kinase II subunit beta-2 (CK II beta-2)|
          Length = 285

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +1

Query: 400 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           W  W+ + RGNE+FCE+D+DYI D FNL GL
Sbjct: 16  WRDWFISSRGNEYFCEIDEDYITDRFNLTGL 46

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>CSK2C_SCHPO (O94281) Probable casein kinase II subunit beta-2 (CK II beta-2)|
          Length = 254

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWISW+C+  G E+F EV +D+I+D FNL GL
Sbjct: 40  SWISWFCSRPGREYFVEVKEDFIEDLFNLTGL 71

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>STEL9_DROME (Q7KV23) Stellate protein CG33247|
          Length = 171

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL8_DROME (Q7KV22) Stellate protein CG33246|
          Length = 171

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL7_DROME (Q7KV19) Stellate protein CG33243|
          Length = 171

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL6_DROME (Q7KV17) Stellate protein CG33241|
          Length = 171

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL4_DROME (Q7KV15) Stellate protein CG33239|
          Length = 171

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL3_DROME (Q7KV14) Stellate protein CG33238|
          Length = 171

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL2_DROME (Q7KV13) Stellate protein CG33237|
          Length = 171

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL1_DROME (Q7KV12) Stellate protein CG33236/CG33244|
          Length = 177

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>SSL_DROME (Q24536) Suppressor-of-stellate-like protein (Suste-like protein)|
           (Su(ste)-like)
          Length = 219

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWI W+  ++G+EF C V ++YIQD FNL GL
Sbjct: 13  SWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGL 44

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>STELO_DROME (Q9NIV2) Stellate orphon protein at 12D|
          Length = 172

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>STEL5_DROME (P15021) Stellate protein CG33240/CG33245|
          Length = 172

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +1

Query: 394 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           +SWI W+  ++GN+F C V  DY+QD FN  GL
Sbjct: 9   SSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGL 41

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>CSK2B_NEUCR (Q8TG12) Casein kinase II subunit beta-1 (CK II beta-1)|
          Length = 333

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 18/32 (56%), Positives = 27/32 (84%)
 Frame = +1

Query: 397 SWISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           SWI+ +C+L G+E+F EV +++I+DDFNL GL
Sbjct: 10  SWIASFCSLLGHEYFAEVSEEFIEDDFNLTGL 41

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>CSK2B_CANAL (O59906) Casein kinase II subunit beta (CK II beta)|
          Length = 294

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 400 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           WI   C L G+++F +V  D+I+DDFNL GL
Sbjct: 12  WIQQLCELFGHDYFVQVSQDFIEDDFNLTGL 42

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>CSK2B_YEAST (P43639) Casein kinase II subunit beta (CK II beta)|
          Length = 278

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = +1

Query: 400 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           WI  +C+  G+E+FC+V  ++I+DDFN+  L
Sbjct: 26  WIPSFCSRFGHEYFCQVPTEFIEDDFNMTSL 56

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>CSK2C_YEAST (P38930) Casein kinase II subunit beta' (CK II beta')|
          Length = 258

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +1

Query: 400 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
           WI  +   +G+E+FC+VD +YI D FNL  L
Sbjct: 38  WIDLFLGRKGHEYFCDVDPEYITDRFNLMNL 68

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>KCNQ1_HUMAN (P51787) Potassium voltage-gated channel subfamily KQT member 1|
           (Voltage-gated potassium channel subunit Kv7.1) (IKs
           producing slow voltage-gated potassium channel alpha
           subunit KvLQT1) (KQT-like 1)
          Length = 676

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
 Frame = -3

Query: 319 WGWRT--ALRRGCGYLGHPPSLSTWRATRPPSPGA-YRALR*CASGPAPPLRP-IPAYTS 152
           WGW      RRG   L      S   A   P+ GA Y  +   A GPAPP  P  PA   
Sbjct: 15  WGWGRLPGARRGSAGLAKKCPFSLELAEGGPAGGALYAPIAPGAPGPAPPASPAAPAAPP 74

Query: 151 VAAD 140
           VA+D
Sbjct: 75  VASD 78

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>FBLN1_CHICK (O73775) Fibulin-1 precursor|
          Length = 704

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +2

Query: 14  SLPCSSPRLGSRPIPARTLTSDVASCVXXXXXXXXIEGGFVVVSGDRCISRDRPE 178
           S  C+ P  G R  P      D+  CV         E  F +  G RC+S + PE
Sbjct: 505 SFQCTCPSTGYRLAPNARNCQDIDECVAETHNCSFNETCFNIQGGFRCLSLECPE 559

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>RUSC1_HUMAN (Q9BVN2) RUN and SH3 domain-containing protein 1 (New molecule|
           containing SH3 at the carboxy-terminus) (Nesca)
          Length = 902

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 12  LPSRAPPLAWALVPSLPEP*P 74
           +P R PP+ WALVP  P P P
Sbjct: 385 VPPRDPPVGWALVPPRPPPPP 405

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>PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 239

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -3

Query: 310 RTALRRGCGYLGHPPSLSTWRATRPPSPGAYRALR*CASGPAPPLRPIP 164
           RTA  R     G PP+ +  RA  PP+P         A+ PAP   P+P
Sbjct: 186 RTAPPRPSTGTGRPPAKTPARAEEPPAP---------AASPAPATAPLP 225

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>ALU1_HUMAN (P39188) Alu subfamily J sequence contamination warning entry|
          Length = 591

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = -2

Query: 230 SRCLSSASLMRFRSSPAPPADPCLYICRR*RRRNPLQCCCRVSALSRRKRHLRLGFGQGW 51
           S CLS  S   +R +P  PA+ C++      R     CC   S     K   RLG  + W
Sbjct: 527 SSCLSLPSSWDYRRAPPRPANFCIFC-----RDGVSLCCPGWSRTPGLKXSSRLGLPKCW 581

Query: 50  D 48
           D
Sbjct: 582 D 582

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>RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1|
          Length = 893

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 12  LPSRAPPLAWALVPSLPEP*P 74
           +P R PP  WALVP  P P P
Sbjct: 377 VPPRDPPAGWALVPPRPPPPP 397

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>ASP_DROME (Q9VC45) Protein abnormal spindle|
          Length = 1954

 Score = 27.3 bits (59), Expect(2) = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 271 PPSLSTWRATRPPSPGAY 218
           PPS  TWR T P  P A+
Sbjct: 179 PPSKQTWRVTAPSRPAAW 196



 Score = 20.8 bits (42), Expect(2) = 4.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 195 PVQPRPSGRSLLIHLSPLT 139
           PV   P  RSL  +LSP+T
Sbjct: 218 PVYISPQPRSLKENLSPMT 236

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>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = -3

Query: 286 GYLGHPPSLSTWRATRPPSPGAYRALR*CASGPAPPLRPIP 164
           G  G PP +     T PP P  Y   R    GP PP RP P
Sbjct: 372 GMRGPPPLMPPHGYTGPPRPPPYGYQR----GPLPPPRPTP 408

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>Y2191_MYCTU (Q10384) Hypothetical protein Rv2191/MT2247|
          Length = 645

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
 Frame = -3

Query: 343 TPLRSSGPWGWRTALRRGCGYLGHPPSLSTWRATRPPSPGAYRALR------*CASGPAP 182
           +P+RS+GPW    A  R     G   S   W++  P  P   R          C +GP  
Sbjct: 574 SPVRSAGPWAAWAATARSAQLAGEQLSRG-WQSDLPTEPHPSREQLFGRTGVDCRTGPPQ 632

Query: 181 PLRP 170
           PL P
Sbjct: 633 PLLP 636

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>FBLN1_CERAE (Q8MJJ9) Fibulin-1 (Fragment)|
          Length = 598

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +2

Query: 14  SLPCSSPRLGSRPIPARTLTSDVASCVXXXXXXXXIEGGFVVVSGDRCISRDRPE 178
           S  CS P  G R  P      D+  CV         E  F +  G RC++ + PE
Sbjct: 419 SFQCSCPASGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCLAFECPE 473

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>FBLN1_HUMAN (P23142) Fibulin-1 precursor|
          Length = 703

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +2

Query: 14  SLPCSSPRLGSRPIPARTLTSDVASCVXXXXXXXXIEGGFVVVSGDRCISRDRPE 178
           S  CS P  G R  P      D+  CV         E  F +  G RC++ + PE
Sbjct: 504 SFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCLAFECPE 558

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>UBP21_HUMAN (Q9UK80) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 21)
           (Ubiquitin-specific-processing protease 21)
           (Deubiquitinating enzyme 21) (NEDD8-specific protease)
          Length = 565

 Score = 23.9 bits (50), Expect(2) = 7.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 186 PRPSGRSLLIHLSPLTTTKPPSMLLP 109
           PRP G     H  PL  + PP++ LP
Sbjct: 76  PRPRGPLRADHGVPLPGSPPPTVALP 101



 Score = 23.5 bits (49), Expect(2) = 7.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 199 ASGPAPPLRPIP 164
           ASGP P LRP+P
Sbjct: 42  ASGPNPMLRPLP 53

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -3

Query: 274 HPPSLSTWRATRPPSPGAYRALR*CASGPAPPLRPIPAYTSVAA 143
           H P L       P  P    A +   S PAPP  P+PA  S A+
Sbjct: 321 HAPPLPPTAPPPPSLPNVTSAPKKATSAPAPPPPPLPAAMSSAS 364

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>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT|
           transcription complex cytosolic component) (NF-ATc1)
           (NF-ATc)
          Length = 943

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -3

Query: 271 PPSLSTWRATRPPS----PGAYRALR*CASGPAPPLRP 170
           PP+L   + + PPS    PG   +L  C S P+PPL P
Sbjct: 818 PPALLPQQVSAPPSSSCPPGLEHSL--CPSSPSPPLPP 853

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>CCPR2_CANAL (Q59X94) Putative heme-binding peroxidase (EC 1.11.1.-)|
          Length = 291

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 165 LLIHLSPLTTTKPPSMLLPRQRPLTQEATSEVRV 64
           +L  LSPL TT PP +L P    + QE T+ + +
Sbjct: 10  ILAILSPLLTTPPPLILPPPYEKIIQEITTVLSI 43

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>PAPPA_MOUSE (Q8R4K8) Pappalysin-1 precursor (EC 3.4.24.79)|
           (Pregnancy-associated plasma protein-A) (PAPP-A)
           (Insulin-like growth factor-dependent IGF-binding
           protein 4 protease) (IGF-dependent IGFBP-4 protease)
           (IGFBP-4ase)
          Length = 1624

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 20/58 (34%), Positives = 24/58 (41%)
 Frame = -3

Query: 340 PLRSSGPWGWRTALRRGCGYLGHPPSLSTWRATRPPSPGAYRALR*CASGPAPPLRPI 167
           P  ++GP    T   RG      PP    W A R P     RA R  A  P+PP R +
Sbjct: 38  PRPAAGPATCATRAARGRRASPPPPPGGAWEAVRVPRRRQQRAAR-GAEEPSPPSRAL 94

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>IL16_SAISC (O62677) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 627

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/65 (29%), Positives = 24/65 (36%)
 Frame = -3

Query: 352 PTLTPLRSSGPWGWRTALRRGCGYLGHPPSLSTWRATRPPSPGAYRALR*CASGPAPPLR 173
           P +T   S  P     +L  G G  GHP        T   +P  YR          PP+ 
Sbjct: 26  PIMTENHSHMPLQPNVSLSEGDGTQGHPDGTPPKLETANGTPKVYRPADSSTVKKGPPVA 85

Query: 172 PIPAY 158
           P PA+
Sbjct: 86  PKPAW 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,553,203
Number of Sequences: 219361
Number of extensions: 1166653
Number of successful extensions: 4315
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4307
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result