>COX2_APILI (P20375) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 225

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 414 PARVRRSNLLGRRPGRLFGSRHSGCRSNH 328
           P R+ + NL+ +RPG  FG     C  NH
Sbjct: 174 PGRINQLNLISKRPGIFFGQCSEICGMNH 202

>COX2_APIKO (P50268) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 225

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 414 PARVRRSNLLGRRPGRLFGSRHSGCRSNH 328
           P R+ + NL+ +RPG  FG     C  NH
Sbjct: 174 PGRINQLNLISKRPGIFFGQCSEICGMNH 202

>COX2_APIFL (P50267) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 225

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 414 PARVRRSNLLGRRPGRLFGSRHSGCRSNH 328
           P R+ + NL+ +RPG  FG     C  NH
Sbjct: 174 PGRINQLNLISKRPGIFFGQCSEICGMNH 202

>RSP2_CAEEL (Q23120) Probable splicing factor, arginine/serine-rich 2|
           (RNA-binding protein srp-4) (CeSRp40)
          Length = 281

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 455 PRRHRGGRSPVCRKAPPSRREGPPASR 535
           PRR    RSP   ++PP+RR  P + R
Sbjct: 194 PRRRSRSRSPTRSRSPPARRRSPGSDR 220

>SGG_DROME (P18431) Protein kinase shaggy (EC 2.7.11.1) (Protein zeste-white 3)|
          Length = 1067

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 442  KVVSASAAPRGKKPGLSQSASFPARGTTGIKKGGAMTSLAKQAKPE 579
            K +  ++ P G +P    +AS  A G+T +   G+  S+   A+P+
Sbjct: 932  KHLQNASGPGGNRPSAGGAASIAASGSTSVSSTGSGASVEGSAQPQ 977

>COX2_RHIDA (Q37643) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 227

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 414 PARVRRSNLLGRRPGRLFGSRHSGCRSNH 328
           P R+ ++ LL  RPG  +G     C SNH
Sbjct: 176 PGRLNQTTLLSNRPGLYYGQCSEICGSNH 204

>COX2_CTEFE (P29872) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 227

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 414 PARVRRSNLLGRRPGRLFGSRHSGCRSNH 328
           P R+ +SN +  RPG  FG     C +NH
Sbjct: 176 PGRLNQSNFMMNRPGLYFGQCSEICGANH 204

>COX2_SIMVI (P98021) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 229

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 414 PARVRRSNLLGRRPGRLFGSRHSGCRSNH 328
           P R+ ++N L  RPG  FG     C +NH
Sbjct: 176 PGRLNQTNFLMNRPGLFFGQCSEICGANH 204

>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early development|
           regulatory protein 1)
          Length = 1004

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
 Frame = +1

Query: 424 GNVLNGKVVSASAAPRGKKPGLSQSAS---------FPARGTTGIKKGGAMTS 555
           G V +G+   AS+ P  + PG  Q             P +GT  + KGGA TS
Sbjct: 560 GTVQSGQAHLASSPPSSQAPGALQECPPTLAPGMTLAPVQGTAHVVKGGATTS 612


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,354,647
Number of Sequences: 219361
Number of extensions: 1100904
Number of successful extensions: 4066
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4060
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)