Clone Name | basd3h14 |
---|---|
Clone Library Name | barley_pub |
>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III| Length = 547 Score = 34.7 bits (78), Expect = 0.21 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 1/132 (0%) Frame = +1 Query: 76 LGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKM-SLQEPKAGGAFAKLGNNT 252 LG ++ + S+ +++SS + TSS P S +T + M SL + G F+K Sbjct: 380 LGSFDESILGSSPINRLSSSFKQYTSSLKSPGLSTRTSSTMNSLNSSRFGAYFSK----- 434 Query: 253 SIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXKDAVVSNGVIPST 432 S V G +S T TS + PS ++AV S+ P+T Sbjct: 435 ---SRYVEGSGSMSTTPLATSVNNSYKLPS------------GFSVREEAVFSS---PTT 476 Query: 433 SGGGPVSSEKMK 468 G PVS ++K Sbjct: 477 EGSRPVSLARLK 488
>TIR3_YEAST (P40552) Cell wall protein TIR3 precursor| Length = 269 Score = 34.3 bits (77), Expect = 0.27 Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 2/98 (2%) Frame = +1 Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSN- 180 AA+ +E+++A +S AA+ + ++ G + ++ + ASS +SS ASS+ Sbjct: 170 AASSSASESSSAASSSASEAAKSSSSAKSSGSSAASSAASSASSKASSAASSSAKASSSA 229 Query: 181 -QTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGL 291 ++ S K GA +G ++ V + ++G A + Sbjct: 230 EKSTNSSSSATSKNAGAAMDMGFFSAGVGAAIAGAAAM 267
>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich| protein 1) Length = 254 Score = 33.5 bits (75), Expect = 0.47 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 6/107 (5%) Frame = +1 Query: 13 DGKAETAAAPQNSVLP----AAQKALGPQNDGVTLST--KSKQVASSNHKETSSSGQPAS 174 +G A ++AAP +S P A + P + + S+ KS A S+ + SSS P+S Sbjct: 110 NGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSSEAKSSSAAPSS 169 Query: 175 SNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTS 315 S AK S P + A + +S + + S A S T +TS Sbjct: 170 SE---AKSSSAAPSSSEAKSSSAAPSSTEAKITS--AAPSSTGAKTS 211
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 33.5 bits (75), Expect = 0.47 Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 4/152 (2%) Frame = +1 Query: 40 PQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSG----QPASSNQTMAKMSLQ 207 PQ+S L L + ++ S +SS+ + TSSS P+SS+ T+ S Sbjct: 87 PQSSSLLTLSSTLSSELSSSSMQVSSSSTSSSSSEVTSSSSSSSISPSSSSSTIISSSSS 146 Query: 208 EPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXX 387 P F ++++ SS +S + L +S S+ S +L+ Sbjct: 147 LP----TFTVASTSSTVASSTLSTSSSL-VISTSSSTFTFSSESSSSLISSSISTSVS-- 199 Query: 388 XXKDAVVSNGVIPSTSGGGPVSSEKMKDLTGS 483 S+ +PS+S P SS +LT S Sbjct: 200 ------TSSVYVPSSSTSSPPSSS--SELTSS 223
>LARP_DROME (Q9VAW5) La-related protein (dlarp)| Length = 1403 Score = 33.5 bits (75), Expect = 0.47 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 5/119 (4%) Frame = +1 Query: 1 RAANDGKAETAAAPQNSVLPAAQKALGPQNDGV-TLSTKSKQVASSNHKETSSSGQPASS 177 R+ + E A P P + L ND V T +T SK +SSN+ ++ ASS Sbjct: 700 RSKTNAIKENATTPPQQQQPPLSQTLNNNNDNVKTNNTSSKSKSSSNNAPSN-----ASS 754 Query: 178 NQTMAKMSLQEPKAGGAFAKLGN----NTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342 + T+ + A A K T+ +++ SG A S+T ++S ++T + PS Sbjct: 755 SATVCVTTNNASSATKATTKTTTTSTATTTTNNNIKSGNAAYSKTHSKSS-SKTAAPPS 812
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 32.3 bits (72), Expect = 1.0 Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 4/150 (2%) Frame = +1 Query: 103 LSTKSKQVASSNHKETSSSGQPASS----NQTMAKMSLQEPKAGGAFAKLGNNTSIVSSM 270 +S+ Q ASS +SS Q ASS + ++++ S + ++ ++ S VSS Sbjct: 161 VSSSVSQSASSASDVSSSVSQSASSTSDVSSSVSQSSSSASDVSSSVSQSSSSASDVSSS 220 Query: 271 VSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPV 450 VS A S +D +S +Q+ S S + V + +++ G Sbjct: 221 VSQSAS-STSDVSSSVSQSAS--STSGVSSSGSQSVSSASGSSSSFPQSTSSASTASGSA 277 Query: 451 SSEKMKDLTGSLKQDDHTVKALTTSKEKTL 540 +S + +T S T +S + T+ Sbjct: 278 TSNSLSSITSSASSASATASNSLSSSDGTI 307 Score = 32.0 bits (71), Expect = 1.4 Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 5/156 (3%) Frame = +1 Query: 103 LSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQE-PKAGGAFAKLGNNTSIVSSMVSG 279 +S+ Q ASS +SS Q ASS ++ Q A G+ + +TS S+ SG Sbjct: 217 VSSSVSQSASSTSDVSSSVSQSASSTSGVSSSGSQSVSSASGSSSSFPQSTSSAST-ASG 275 Query: 280 PAGLSETDKQTSCAQTCSKPSLN-LVXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSS 456 A + TS A + S + N L + G + +T G + Sbjct: 276 SATSNSLSSITSSASSASATASNSLSSSDGTIYLPTTTISGDLTLTGKVIATEGVVVAAG 335 Query: 457 EKMKDLTG---SLKQDDHTVKALTTSKEKTLLPGLE 555 K+ L G S D L K K PG E Sbjct: 336 AKLTLLDGDKYSFSADLKVYGDLLVKKSKETYPGTE 371
>PODXL_MOUSE (Q9R0M4) Podocalyxin-like protein 1 precursor| Length = 503 Score = 32.3 bits (72), Expect = 1.0 Identities = 27/101 (26%), Positives = 45/101 (44%) Frame = +1 Query: 25 ETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSL 204 ++ + P ++ P + ++ G V+ K+K + S+ TSSSGQ ASS Sbjct: 75 QSPSMPTSTPNPTSNQSGGNLTSSVSEVDKTKTSSPSSTAFTSSSGQTASSG-------- 126 Query: 205 QEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQT 327 K+G +F T + ++ S P L+ T K S T Sbjct: 127 --GKSGDSFTTAPTTTLGLINVSSQPTDLNTTSKLLSTPTT 165
>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)| Length = 881 Score = 32.0 bits (71), Expect = 1.4 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 11/183 (6%) Frame = +1 Query: 16 GKAETAAAPQNSVLP--AAQKALGPQNDGVTLSTKSKQVASSNHKETS---------SSG 162 G + ++A +SV A + +D + +T + VA+S+ +S SS Sbjct: 239 GSSTVSSASSSSVTTSYATSSSTVVSSDATSSTTTTSSVATSSSTTSSDPTSSTAAASSS 298 Query: 163 QPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342 PASS+ + + E A + A S SSMVS P S T+ +++ + S Sbjct: 299 DPASSSAAASSSASTENAASSSSA-----ISSSSSMVSAPLS-STLTTSTASSRSVTSNS 352 Query: 343 LNLVXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSSEKMKDLTGSLKQDDHTVKALTT 522 +N V S + S+ + K+ T S+ + V + T Sbjct: 353 VNSVKFANTTVFSAQTTSSVSAS---LSSSVAADDIQGSTSKEATSSVSEHTSIVTSATN 409 Query: 523 SKE 531 + + Sbjct: 410 AAQ 412
>RL22_DROME (P50887) 60S ribosomal protein L22| Length = 299 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = +1 Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183 AA D KA AAA + PAA K D + K A++ K+ ++ PA + Sbjct: 59 AAKDVKAAAAAAKPAAAKPAAAKPAAASKD----AGKKAPAAAAPKKDAKAAAAPAPAKA 114 Query: 184 TMAKMSLQEPKA 219 AK + P A Sbjct: 115 APAKKAASTPAA 126
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/105 (20%), Positives = 45/105 (42%) Frame = +1 Query: 28 TAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQ 207 T + +S L + ++ + V+ S ASS+ +++S P+SS + + S Sbjct: 423 TGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSA 482 Query: 208 EPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342 + + A ++ S +S S P+ + + S + + S S Sbjct: 483 ASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSAS 527 Score = 31.2 bits (69), Expect = 2.3 Identities = 27/140 (19%), Positives = 52/140 (37%) Frame = +1 Query: 16 GKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAK 195 G + +++P +S ++ P + + S S +SS SSS P+SS + + Sbjct: 452 GSSAASSSPSSSAASSS-----PSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSA 506 Query: 196 MSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXX 375 S + A + +++S SS S A + T T+ A T + + Sbjct: 507 PS-SSASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTTATTTATTATTTATTT 565 Query: 376 XXXXXXKDAVVSNGVIPSTS 435 A + +T+ Sbjct: 566 ATTTAATIATTTAATTTATT 585
>BASP_HUMAN (P80723) Brain acid soluble protein 1 (BASP1 protein) (Neuronal| axonal membrane protein NAP-22) (22 kDa neuronal tissue-enriched acidic protein) Length = 226 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/95 (28%), Positives = 41/95 (43%) Frame = +1 Query: 22 AETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMS 201 AE AAAP S PAA + + K++ A+ +ET S G PAS ++ + + Sbjct: 122 AEAAAAPAESAAPAAGEEPSKEEGE---PKKTEAPAAPAAQETKSDGAPASDSKPGSSEA 178 Query: 202 LQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDK 306 K A + ++T GPA +E K Sbjct: 179 APSSKETPAATEAPSST----PKAQGPAASAEEPK 209
>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I| Length = 598 Score = 31.6 bits (70), Expect = 1.8 Identities = 37/180 (20%), Positives = 60/180 (33%), Gaps = 10/180 (5%) Frame = +1 Query: 16 GKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAK 195 GK T +AP ++ ++ ND ++ + ++ +GQ AS+ Sbjct: 229 GKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAPTTGFSFGKPAGQAASTATDKGT 288 Query: 196 MSLQEPKAGGAFAKLG-----NNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXX 360 + G +F K N + +S + PA + +K T SKP+ N Sbjct: 289 TTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDNKPTFSFGNTSKPTENTSTT 348 Query: 361 XXXXXXXXXXXKDAVVSNGVIPSTSGGGP-----VSSEKMKDLTGSLKQDDHTVKALTTS 525 K A +N S G P S+ K L G+ D T S Sbjct: 349 ATSAPPLSNNTKPAEGANQTSSGFSFGKPATDTTTSTSKTGPLFGNKPADPSAKPGATAS 408
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 31.2 bits (69), Expect = 2.3 Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 7/180 (3%) Frame = +1 Query: 49 SVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGA 228 S P + + T STK+ A+ TS+ G +NQ+ + + A G Sbjct: 316 STPPPSSSTIKTTTKATTTSTKTTTTAAPT--ATSAPGSCPVANQSCSTQNQYACTADGK 373 Query: 229 FAKLGNNTSIVSSMVSGPAGLSETD-------KQTSCAQTCSKPSLNLVXXXXXXXXXXX 387 +A + +VSS SG + TD T TC S + Sbjct: 374 YAVCDHGKWVVSSCPSGTVCIPTTDGTSIYCGYATGSGSTCPSASALEIAAASFGS---- 429 Query: 388 XXKDAVVSNGVIPSTSGGGPVSSEKMKDLTGSLKQDDHTVKALTTSKEKTLLPGLEQVDV 567 NG +P P + K+ D ++ +A+ ++ TL P + V + Sbjct: 430 -------KNGPVPR-----PYKASKVAAQLAVTSTDKNSFEAVINARRTTLTPFEKSVTI 477
>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner| cell wall protein) Length = 238 Score = 31.2 bits (69), Expect = 2.3 Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Frame = +1 Query: 7 ANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQ-VASSNHKETSSSGQPASSNQ 183 A+ G + ++A+ S A + + + STK+ ASS+ K +SSS P+SS Sbjct: 88 ASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSSASSSTKASSSSAAPSSSKA 147 Query: 184 TMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLN 348 + + S + A + ++++ VSS + SE ++ + T S+ +++ Sbjct: 148 SSTESSSSSSSSTKAPSSEESSSTYVSSSKQA-SSTSEAHSSSAASSTVSQETVS 201 Score = 31.2 bits (69), Expect = 2.3 Identities = 26/138 (18%), Positives = 50/138 (36%) Frame = +1 Query: 22 AETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMS 201 A+ A + S +LG + + S S ASS+ K +SSS ++ + + S Sbjct: 72 ADAAYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSSASS 131 Query: 202 LQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXX 381 + + A +S SS S + + + +++S S + Sbjct: 132 STKASSSSAAPSSSKASSTESSSSSSSSTKAPSSEESSSTYVSSSKQASSTSEAHSSSAA 191 Query: 382 XXXXKDAVVSNGVIPSTS 435 VS+ + ST+ Sbjct: 192 SSTVSQETVSSALPTSTA 209
>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo| red hypersensitive protein 1) Length = 507 Score = 31.2 bits (69), Expect = 2.3 Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 9/172 (5%) Frame = +1 Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183 +++ + +++ ++V + + S+ S V+SS+ +SSS P+SS Sbjct: 304 SSSTSSSTVSSSASSTVSSSVSSTVSSSASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTA 363 Query: 184 TMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQ----TCSKPSLNL 351 T +K ++ SS V+ + +S +KQ+S + S S ++ Sbjct: 364 TSSK-------------------TLASSSVTTSSSISSFEKQSSSSSKKTVASSSTSESI 404 Query: 352 VXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSSE-----KMKDLTGSLKQ 492 + + V S S PV + D+T S Q Sbjct: 405 ISSTKTPATVSSTTRSTVAPTTQQSSVSSDSPVQDKGGVATSSNDVTSSTTQ 456
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac| Length = 1120 Score = 31.2 bits (69), Expect = 2.3 Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 8/153 (5%) Frame = +1 Query: 22 AETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQT----- 186 A A+A + A + A +T + A S ++S+GQ ASS Q+ Sbjct: 114 ARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASSAQSASSSA 173 Query: 187 -MAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTS--CAQTCSKPSLNLVX 357 A E A A+ + + S +G A SET+ S A T + + Sbjct: 174 GTASTKATEASKSAAAAESSKSAAATS---AGAAKTSETNASASLQSAATSASTATTKAS 230 Query: 358 XXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSS 456 K+A S+ S+S SS Sbjct: 231 EAATSARDAAASKEAAKSSETNASSSASSAASS 263
>RTOA_DICDI (P54681) Protein rtoA (Ratio-A)| Length = 400 Score = 30.8 bits (68), Expect = 3.0 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Frame = +1 Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183 ++N G +E+++ NS ++ + G N G S+ S S + +S+SG +SS Sbjct: 213 SSNSG-SESSSGSSNS---GSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGS 268 Query: 184 TMA-KMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLV 354 + + S G+ + +N+ SS SG S +D +T+C S+N V Sbjct: 269 SNSGSESSSGSSNSGSESSGSSNSGSESSSDSG----SSSDGKTTCISFHDTLSINTV 322
>KCNN1_MOUSE (Q9EQR3) Small conductance calcium-activated potassium channel| protein 1 (SK1) Length = 580 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = +1 Query: 16 GKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAK 195 G + +PQ + GPQ T S + +QVA S+H S GQP S Sbjct: 7 GDVQPLLSPQVHSEALLRNHAGPQRACCTPSPR-RQVAMSSHSHNGSVGQPLGSGPGFLG 65 Query: 196 MSLQEPKAG 222 +P+AG Sbjct: 66 WEPVDPEAG 74
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 30.8 bits (68), Expect = 3.0 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Frame = +1 Query: 1 RAANDGKAETAA-APQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASS 177 RA G ++ AA APQ P AQ A GP +K A + +GQPA+ Sbjct: 3851 RAEQAGSSKPAAKAPQQGRAPQAQSAPGPAG--------AKTGARPGGTPGAPAGQPAAE 3902 Query: 178 NQTMAKMSLQEPKAGGAFAKLGNNTSIVSS 267 +++ L GGA + G T VS+ Sbjct: 3903 GESVFSKIL----PGGAAEQAGKLTEAVSA 3928
>OSH2_YEAST (Q12451) Oxysterol-binding protein homolog 2| Length = 1283 Score = 30.4 bits (67), Expect = 4.0 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +1 Query: 100 TLSTKSKQVASSNHKETSSSGQPASS--NQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMV 273 +L+ K+K A +H +T S AS T+ K +Q P + + + NN S+VSS + Sbjct: 403 SLALKNKSPALISHSKTQGSLPEASQYYQHTLHKEVIQ-PSSVSLYRRPSNNLSVVSSEI 461 Query: 274 SGPAGLSETDKQ 309 L+E+ K+ Sbjct: 462 QLNDNLTESGKR 473
>SP4_MOUSE (Q62445) Transcription factor Sp4| Length = 782 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = +1 Query: 25 ETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSS-SGQPASSNQTMAKMS 201 + + P S PA+ P + +T S + SS+ +S+ +GQ AS++ + ++ + Sbjct: 297 QLVSTPTTSTAPASTMPESPSSSTTCTTTASTTLTSSDTLVSSADTGQYASTSASSSERT 356 Query: 202 LQEPKAGGAFAKLGNNTSIVSS 267 ++EP+ A ++S + S Sbjct: 357 IEEPQTPAATESEAQSSSQLQS 378
>MERL_MOUSE (P46662) Merlin (Moesin-ezrin-radixin-like protein)| (Neurofibromin-2) (Schwannomin) Length = 596 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 139 HKETSSSGQPASSNQTMAKMSLQEPKAGGAF 231 H E+S G P+S + T+ K++LQ K+ AF Sbjct: 562 HSESSDRGGPSSKHNTIKKLTLQSAKSRVAF 592
>MAGD1_RAT (Q9ES73) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (Sertoli cell necdin-related gene 1) (SNERG-1) Length = 775 Score = 30.0 bits (66), Expect = 5.2 Identities = 29/104 (27%), Positives = 46/104 (44%) Frame = +1 Query: 31 AAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQE 210 AA+ S ++ A QN +TK+ A+ N ++ S+ + ++ AK Sbjct: 133 AASTGKSAAKKSEMAFKGQNT----TTKAGPSATYNFTQSPSANEMTNNQPKTAKAWNDT 188 Query: 211 PKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342 K GA A+ N + V AG+SETD + AQT + S Sbjct: 189 TKIPGADAQTQNVNQAKMADVGTSAGISETD--GAAAQTSADGS 230
>ADG3_SCHPO (O74851) Protein adg3 precursor| Length = 1131 Score = 30.0 bits (66), Expect = 5.2 Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 10/182 (5%) Frame = +1 Query: 73 ALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGAFAKLGNNT 252 ++GP + T ++ S S + KETSS PA + T++ S + Sbjct: 640 SVGPSSSQTTPTSSSSITGSQSLKETSS---PAYVSSTVSYTS----------------S 680 Query: 253 SIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXK----------DA 402 S+ SS G S +D Q+ T S P+ + + DA Sbjct: 681 SVDSSSTYNSTGSSSSDSQSFSGTTYSDPTTTITSEVSSILSSPTSMQSSVSRPQSSGDA 740 Query: 403 VVSNGVIPSTSGGGPVSSEKMKDLTGSLKQDDHTVKALTTSKEKTLLPGLEQVDVGKQIS 582 N + S S + + S + + TS + P + Q + +S Sbjct: 741 SGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPTITQSSISTSVS 800 Query: 583 SQ 588 SQ Sbjct: 801 SQ 802
>HPT_PIG (Q8SPS7) Haptoglobin precursor [Contains: Haptoglobin alpha chain;| Haptoglobin beta chain] Length = 347 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 387 ESLCGKPGNRANQVQAWLGTCLSARSLF 304 E++CGKP N +QVQ +G L A+ F Sbjct: 87 EAVCGKPKNPVDQVQRIMGGSLDAKGSF 114
>ATC3_YEAST (P39524) Probable phospholipid-transporting ATPase DRS2 (EC| 3.6.3.1) Length = 1355 Score = 30.0 bits (66), Expect = 5.2 Identities = 18/69 (26%), Positives = 27/69 (39%) Frame = +1 Query: 40 PQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKA 219 P + VLP L +D + S+NH + +S + SL+ K Sbjct: 49 PPSHVLPEETIDLDADDDNIENDVHENLFMSNNHDDQTSWNANRFDSDAYQPQSLRAVKP 108 Query: 220 GGAFAKLGN 246 G FA+ GN Sbjct: 109 PGLFARFGN 117
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 30.0 bits (66), Expect = 5.2 Identities = 21/87 (24%), Positives = 34/87 (39%) Frame = +1 Query: 10 NDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTM 189 ND + PQ + P A LG D E +GQ AS+N+ Sbjct: 30 NDTSLKQTKRPQKAAPPQALDFLGGDID------------DDEDDEAFIAGQQASANRKA 77 Query: 190 AKMSLQEPKAGGAFAKLGNNTSIVSSM 270 + + + K GG F +G N ++ ++ Sbjct: 78 SNLKGRTVKKGGGFQAMGLNAHLLKAI 104
>VTS1_CANGA (Q6FM94) Protein VTS1| Length = 549 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = +1 Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183 A N+ N + +A + +TL+ ++ +S++ SSSG ASSN Sbjct: 405 ANNNNIGSNNTKRMNDITNSADVPVTSSFQNLTLNNQNGSTTTSSNNGNSSSG--ASSNS 462 Query: 184 TMAKMSLQEPK 216 +M SL +PK Sbjct: 463 SMNPKSLTDPK 473
>OTX1_HUMAN (P32242) Homeobox protein OTX1| Length = 354 Score = 29.6 bits (65), Expect = 6.7 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 7/106 (6%) Frame = +1 Query: 28 TAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASS-------NQT 186 T + P +++ G ++ G ASS+ +SSS PA++ N Sbjct: 103 TKSRPAKKKSSPVRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAGLGGNPV 162 Query: 187 MAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQ 324 A SL P A ++ + + VS P L+ TSC Q Sbjct: 163 AAASSLSTPAASSIWSPASISPGSAPASVSVPEPLA-APSNTSCMQ 207
>GP149_CHICK (Q9DDD1) Probable G-protein coupled receptor 149 (G-protein coupled| receptor R35) Length = 723 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = +1 Query: 121 QVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSET 300 +++ +H + N + + + P+ GG A L S S GPAGLS T Sbjct: 407 RISPESHHHDGDGKSTSCHNLLVCEKPYEPPRGGGGGAALAE-LSTTDSARPGPAGLSAT 465 Query: 301 D 303 D Sbjct: 466 D 466
>TGM3_MOUSE (Q08189) Protein-glutamine gamma-glutamyltransferase E precursor| (EC 2.3.2.13) (TGase E) (TGE) (TG(E)) (Transglutaminase-3) [Contains: Protein-glutamine gamma-glutamyltransferase E 50 kDa noncatalytic chain; Protein-glutamine gamma-glutamyltra Length = 693 Score = 29.6 bits (65), Expect = 6.7 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Frame = +1 Query: 151 SSSGQPASSNQTMAKMSLQEPKAGGAFAKL----GNNTSI-VSSMVSGPAGL 291 S+ QP+ S +T A S+ GG A L GNN +I ++S VS P GL Sbjct: 59 STGPQPSESARTKAVFSISGRSTGGWNAALKANSGNNLAIAIASPVSAPIGL 110
>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2| Length = 1422 Score = 29.6 bits (65), Expect = 6.7 Identities = 34/155 (21%), Positives = 49/155 (31%) Frame = +1 Query: 82 PQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIV 261 PQ G L+T S + +S+ GQ + K +L A G A L + Sbjct: 869 PQTSGKQLTTGSVVQGTLGVSTSSAQGQQTLKVISGQKTTLFTQAAHGGQASLMKISD-- 926 Query: 262 SSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXKDAVVSNGVIPSTSGG 441 T K SKP ++ A+ +NG + G Sbjct: 927 -----------STLKTVPATSQLSKPGTTMLRVAGGVITTATSPAVALSANGPAQQSEGM 975 Query: 442 GPVSSEKMKDLTGSLKQDDHTVKALTTSKEKTLLP 546 PVSS + +T + Q V T K P Sbjct: 976 APVSSSTVSSVTKTSGQQQVCVSQATVGTCKAATP 1010
>OSP_DROME (Q27421) Protein outspread| Length = 1553 Score = 29.6 bits (65), Expect = 6.7 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = +1 Query: 43 QNSVLPAAQK--ALGPQNDG-VTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEP 213 +++ LP Q +L P ++G +TLSTK SS HK+T +S Q A + + + Sbjct: 184 RSATLPGGQVVGSLRPTSNGDLTLSTKLGNRHSSYHKDTLTSSQSAGNLLSSLDLGPSST 243 Query: 214 KAGGA 228 K G+ Sbjct: 244 KTAGS 248
>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)| Length = 220 Score = 29.3 bits (64), Expect = 8.8 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%) Frame = +1 Query: 4 AANDGKAETAAAPQNSVLPAAQ-KALGPQNDGVTLSTKS-------KQVASSNHKETSSS 159 +++ A +AA QNS + A G +N+ + S+ + QV +++ ++SSS Sbjct: 112 SSSSSSASNSAAAQNSASSSETINADGSENESSSSSSSAAQNSATRSQVINADGSQSSSS 171 Query: 160 GQPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVS 276 ++SNQ A S A G+ ++ +++S SS S Sbjct: 172 SSSSASNQASATSS-SSVSADGSESESSSSSSSSSSSSS 209
>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor| Length = 1783 Score = 29.3 bits (64), Expect = 8.8 Identities = 19/79 (24%), Positives = 34/79 (43%) Frame = +1 Query: 31 AAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQE 210 A+AP S+ A+ A+G + S + + A+ + + + PA+S A Sbjct: 658 ASAPTTSLASASGPAIGTSSSNAHSSAAASEAAAGTVRAPTDTAAPAASPAATAPALAST 717 Query: 211 PKAGGAFAKLGNNTSIVSS 267 P A A A L +V++ Sbjct: 718 PFATPAAAPLPEPPEVVAA 736
>ITBP1_PONPY (Q5R5S7) Integrin beta-1-binding protein 1| Length = 200 Score = 29.3 bits (64), Expect = 8.8 Identities = 22/74 (29%), Positives = 38/74 (51%) Frame = +1 Query: 19 KAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKM 198 K ++++ Q+S + K++ G++ +S VAS + T SSGQ S++ T A+ Sbjct: 7 KRHSSSSSQSSEISTKSKSVDSSLGGLS---RSSTVASLDTDSTKSSGQSNSNSDTCAEF 63 Query: 199 SLQEPKAGGAFAKL 240 + K GA KL Sbjct: 64 RI---KYVGAIEKL 74 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.300 0.117 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,325,423 Number of Sequences: 219361 Number of extensions: 1658653 Number of successful extensions: 3192 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3170 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.7 bits)